>input_sequence_31327
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------------------ATGGAGAAGGCCCTCACCAAGCTCGGCAGCTTCACCATCCCCCGCAAGGCCAAGCAGGAGCT
CTCCGCCATCGGCGGCGACATCTCGGTCAGTGCTCCGCTACTCTTGCCTTCCTTCCCGCCCTCCCGCGTCATCTCTCTCT
CCCTCCTTTCTTTCTCGCTCTTCGTGGCTGGG------TTCGTCATGGCGAATCCCTTCTCGTTCTTGGTGAATCGCTTG
GACCGGGTAAAATGCCGTTCCTGATTTCCCGGCTCGCTTGCTTGTTTCCGTGAGATTTTTACGGGTTTCCGTTATCACGG
GGATGGATGGATGGATGGACGGATTCTTTTTTGTTGCTCGGTGTTCTGTTTTCCTCGTCCTCATCTTTTTCTGCGGCTGT
TGCAGTTCAGAAATTATCTGGCTGTCAACATTTCGTGGTTCACATGTTGTTCGTGCTAAGGACCAAGAAAATCTTGAGTT
CTTGATTGAAGCATTCATTTGCAGATCTTTCTCTTATATTCTTCCCCC-TTTAGGCCGGGTTATATTCGTTCCTTTTCCC
ACCAAGACCAGCGAAAGTTCCTGCTT-TGATTTGCAACTTTTTTTCCGAGTGGATTGCCATATGAAAATCATTATTTGAT
TCGATCGCACTTCTGCATTCGCTATACCGACTCAGTAGTA---CATTCCAGTGCATTGTAACTCTAAGGGAAACTTTAAT
TATT-----ACTCCACTC---TAGTTCCAACTTCCAAGTGGTTCAGTTCATCCGTCACAAGTCACAGCCAATAACCCAAC
TATTTCTGATCTGCAGCGCATCTCAAGCACCGTGGAGGAGAAGGCGAAATGGGTCTTCGAGAAGCTCAAAGGTACTGTAG
TATCGATCGCTCTGCTCCATAATTTCTCTAATTTCCGTTCAGTGGTCGCTTTGCGGCTCAGGAAATAGCAGTTAGTCTGA
AGCTACATGTCACGTCGTCTTAGCAACATCTTCAGTACACTCGTCCATCGCTGTTAGCAACGCTGTTTTTCTTGCTGATG
CGTAACACCAAAGCAAACCAAG-GAGTGCTTTCTTTAATACGGCTGTATCCATCCACATAGCCTTTCTTCACGATTTGGA
TCTGGCTC--------------TAATCCAAGTACTCGTTTCGATCTGCAAAGTACTAGTAATACAATGAGTGACGCTGAT
GCACATGGGGGCCAAACTGAAATGGGTCCAATGTTTGTTGACGCAATTATGCAAAAGCTCCTAGGACG--ATAGTGCAGA
GCAGGGGGGACTTGCTCACCTAACATCTTGTTTTACTTGCAATCTTTGCACTGGGTCTGTTGAGGTCTTTGGCGGTATTA
CCAAGGCTGTCTTCAGCTTGTCATTGGATTAGCAAGCACCAGCCAGCTGATTTGGTAGTCTGCAGTGCATAGTCTATTCA
ATATTTTCTTCTAAGCAGCCCCTAATCTGTACTCTTACAGGAAGCTGCGAACAACTAGTGGTATACTCGGATCTGCAATC
CGACCGCTCACGTGAAAACATTGTGCGGAAAGACAGTAGTTTCTTAAATAAAATGCGAATGTTCTGAAGTACTTCCGCCC
TTCACTATTATAAGATGTTTTGGATATTTCAATATGGACTACATACG---------GCCTAAAATGAGTGAACAAACACA
CTAAAATGCGTCTAC-------------------------------------------ATACTTCCGATTCAGAAAAGAG
TTAGAACATCTTATA-----------------------------------------------------------------
------------------------------------------------------------ATATTGAACGGAGGGAGTAG
TTTGTTAAATAAAATGTGAATGCTAGCAAAGCAGATCAGTTGGCAAGTTTTTTGCCACTTGCAGGCCATCTTCAATTGTG
CCTTCCAGTTTGTTTGTTTTGTTGGTTTAAGTAGGT--------------------------------------------
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-----------------------------------------------------ATACGGTATACATTGCTCTGAGACATC
TTTCTTCTGATCAAAAAATCCTTCATATGAACTTCCCATTTTCACACTTTGTTCCACTGCAATTCCAGTCTTGTAGTATA
CATAATTCGGCATTTACACTTTACATACATCATTCTCCATGTATTTGAACTTTGCTAAAGCGCTCGAAACTGCTGCTTCT
GAATTCCCTTCTGCGTGTCAATATGTTTGTGGCATTCTCATGCCATGGTTCACATGTTGCCATTAGGTCTATGCAATTCT
AGCTAGTGACAATTGAATAATTGCTATATAAATGTCTACTATATATGGACTACAAGTGACTGACCCTATTTCTTTCTTAT
TCAGGCAAACCAAACAAGTCCCTCTCTGACCTGCTGCGCGAGTACAACCTCCCTCCGGGCCTCTTCCCTCGGAACATCAT
CTGCTACGAGTACGACCAGACGAGCTCGAGGCTCGTGGTGCACCTGGCCAAGCCCTGCGAGGTGAGCTTCAAGGACTCCT
CCATGATACGGTACGCCACCCGCGTGAAGGCGACCCTGTCCCGGGGCAAGCTCTCGGCGATCGAGGGCATGAAGACCAAG
GTGGTGGTGTGGGTGAAGGTGACCACCGTGAACCTGGAGAGCTTCCGGTCCGACAAGGTGTGCTTCATCGCCGGCGTGAA
GAAGCTGAGGCAGAAGGACGCCTACGAGGTGCCCCGCGAAGCCGCCTCCGTCGAGGAGTTCTGA----------------
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>chr4D_1_TraesCS4D01G251700
TGCATTGCACGGAACACTAAGATTGGGGGTGGACGGCGCCGGTAGCAGCCATCGCACCAGATTGTTCCATGGCCTTCTAG
ACGTGGTGGGGAAGAGATAAGGCTGATTGTGAGAGACAAGAAGTTGTTTGTAAATATGAAAACAAGTGCGGGCATTTTTT
TTATAAAACTGCAGCAGTTTGCTTTGTATGCGTCAGATCTAGATACAACGGCTATTGATGAAAGATTGCACGCAAACCAT
CATCATCAATTCAGATTTTTATAGGAGTAGAGATACCATCCGCTTGTGCCGCTTTTGGCTTGGATAACGTGTGTCGTTGA
TCAGAATCGGGCGTTTCGCACGGCGAGGCTGGGTCTGTGCGCGGCGGAAGACAAATCAGCGCGCGGCTGGGCGGCAATGC
AATGGACCAACAACGGTGAGGCGTCACGCTCTTGGCCATGCAACACGCGGAAATAGCCGTTCCTTGTACTCTACTCTGGT
GCCGGACCTGGCTTCTGTGATGCGGCATACGCTCGGCTCGGTCACGCGGCTCGCTGTCATATTCGGGCCCTTTTC-----
--GGGTCCGTGCGCGTCCCAAACCGCAGCCCCGGTTCGCCCGCGATCCTCCCTCCTTCGCACAAGATTTTAGGGCCGAGC
GACGCGACCAAATCGGCCTGATCACTTCTCGAATGTCGTCCAAATTTCGGCGTGGATAGTAGTAACAGAAACGAGACTGC
GGCGCCCATAT---------------------------------------------------------------------
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-----------------------------------ATCCCTCCAACGTCTCCTTCCCTTTTCCTATCTCCAGAAGCTTCA
CTCCACTGTTGATCCATCGCACGCACCCACCAAACAAACACCCAGCCCGCACGCTCGCTATTATTTATT-----------
---------CCGCTCTTTATTTATTCCGCTCCTTTCCTGTGGAGCGTGCCGCAGCTCTGAACCTGGTTCCGTCCACTGTC
TGTCGCCCATCCCGCGGCACCCC-ACGCACGCGCCACAGCCAGCCGGCGTCCGCGTCCGCGTCCACACGCTCCACGCC--
----GGCGCCGAGGAAGGATGGAGAAGGCCCTCACCAAGCTCGGCAGCTTCACCATCCCCCGCAAGGCCAAGCAGGAGCT
CTCCGCCATCGGCGGCGACATCTCGGTCAGTGCTCCGCTACTCTTGCCTTCCTTCCCGCCCTCCCGCGTCATCTCTCTCT
CCCTCCTTTCTTTCTCGCTCTTCGTGGCTGGG------TTCGTCATGGCGAATCCCTTCTCGTTCTTGGTGAATCGCTTG
GACCGGGTAAAATGCCGTTCCTGATTTCCCGGCTCGCTTGCTTGTTTCCGTGAGATTTTTACGGGTTTCCGTTATCACGG
GGATGGATGGATGGATGGACGGATTCTTTTTTGTTGCTCGGTGTTCTGTTTTCCTCGTCCTCATCTTTTTCTGCGGCTGT
TGCAGTTCAGAAATTATCTGGCTGTCAACATTTCGTGGTTCACATGTTGTTCGTGCTAAGGACCAAGAAAATCTTGAGTT
CTTGATTGAAGCATTCATTTGCAGATCTTTCTCTTATATTCTTCCCCC-TTTAGGCCGGGTTATATTCGTTCCTTTTCCC
ACCAAGACCAGCGAAAGTTCCTGCTT-TGATTTGCAACTTTTTTTCCGAGTGGATTGCCATATGAAAATCATTATTTGAT
TCGATCGCACTTCTGCATTCGCTATACCGACTCAGTAGTA---CATTCCAGTGCATTGTAACTCTAAGGGAAACTTTAAT
TATT-----ACTCCACTC---TAGTTCCAACTTCCAAGTGGTTCAGTTCATCCGTCACAAGTCACAGCCAATAACCCAAC
TATTTCTGATCTGCAGCGCATCTCAAGCACCGTGGAGGAGAAGGCGAAATGGGTCTTCGAGAAGCTCAAAGGTACTGTAG
TATCGATCGCTCTGCTCCATAATTTCTCTAATTTCCGTTCAGTGGTCGCTTTGCGGCTCAGGAAATAGCAGTTAGTCTGA
AGCTACATGTCACGTCGTCTTAGCAACATCTTCAGTACACTCGTCCATCGCTGTTAGCAACGCTGTTTTTCTTGCTGATG
CGTAACACCAAAGCAAACCAAG-GAGTGCTTTCTTTAATACGGCTGTATCCATCCACATAGCCTTTCTTCACGATTTGGA
TCTGGCTC--------------TAATCCAAGTACTCGTTTCGATCTGCAAAGTACTAGTAATACAATGAGTGACGCTGAT
GCACATGGGGGCCAAACTGAAATGGGTCCAATGTTTGTTGACGCAATTATGCAAAAGCTCCTAGGACG--ATAGTGCAGA
GCAGGGGGGACTTGCTCACCTAACATCTTGTTTTACTTGCAATCTTTGCACTGGGTCTGTTGAGGTCTTTGGCGGTATTA
CCAAGGCTGTCTTCAGCTTGTCATTGGATTAGCAAGCACCAGCCAGCTGATTTGGTAGTCTGCAGTGCATAGTCTATTCA
ATATTTTCTTCTAAGCAGCCCCTAATCTGTACTCTTACAGGAAGCTGCGAACAACTAGTGGTATACTCGGATCTGCAATC
CGACCGCTCACGTGAAAACATTGTGCGGAAAGACAGTAGTTTCTTAAATAAAATGCGAATGTTCTGAAGTACTTCCGCCC
TTCACTATTATAAGATGTTTTGGATATTTCAATATGGACTACATACG---------GCCTAAAATGAGTGAACAAACACA
CTAAAATGCGTCTAC-------------------------------------------ATACTTCCGATTCAGAAAAGAG
TTAGAACATCTTATA-----------------------------------------------------------------
------------------------------------------------------------ATATTGAACGGAGGGAGTAG
TTTGTTAAATAAAATGTGAATGCTAGCAAAGCAGATCAGTTGGCAAGTTTTTTGCCACTTGCAGGCCATCTTCAATTGTG
CCTTCCAGTTTGTTTGTTTTGTTGGTTTAAGTAGGT--------------------------------------------
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-----------------------------------------------------ATACGGTATACATTGCTCTGAGACATC
TTTCTTCTGATCAAAAAATCCTTCATATGAACTTCCCATTTTCACACTTTGTTCCACTGCAATTCCAGTCTTGTAGTATA
CATAATTCGGCATTTACACTTTACATACATCATTCTCCATGTATTTGAACTTTGCTAAAGCGCTCGAAACTGCTGCTTCT
GAATTCCCTTCTGCGTGTCAATATGTTTGTGGCATTCTCATGCCATGGTTCACATGTTGCCATTAGGTCTATGCAATTCT
AGCTAGTGACAATTGAATAATTGCTATATAAATGTCTACTATATATGGACTACAAGTGACTGACCCTATTTCTTTCTTAT
TCAGGCAAACCAAACAAGTCCCTCTCTGACCTGCTGCGCGAGTACAACCTCCCTCCGGGCCTCTTCCCTCGGAACATCAT
CTGCTACGAGTACGACCAGACGAGCTCGAGGCTCGTGGTGCACCTGGCCAAGCCCTGCGAGGTGAGCTTCAAGGACTCCT
CCATGATACGGTACGCCACCCGCGTGAAGGCGACCCTGTCCCGGGGCAAGCTCTCGGCGATCGAGGGCATGAAGACCAAG
GTGGTGGTGTGGGTGAAGGTGACCACCGTGAACCTGGAGAGCTTCCGGTCCGACAAGGTGTGCTTCATCGCCGGCGTGAA
GAAGCTGAGGCAGAAGGACGCCTACGAGGTGCCCCGCGAAGCCGCCTCCGTCGAGGAGTTCTGAACCTTGATCTGATGAT
CCGTCTTCTTAT--------CCATAGTGTCCATGATTCGTGCCATTCTTTTGAGTCCCATGTG--GTGTGGTTCCTGAGG
GCGTGCTGGTGATTGAGTTGGTGTGCTGAGGCTCGGCATGTCTGTACATTGGATTTGGTTCTTCCCGATGAAAGGCACCC
TTGCATGTTCTCTGATCATTTCGCATGTGTGGTGTCCCAGTCATGTGAACATCTATCATGTGGTCTGGCTTTGTGTTG--
----TGTCGGGGACCTGTGTTTCAGTGC--------------------GGCTGCTGGCTGAGGTGCATTGCATTTTTGCC
GAAATAATTGTTTCAGCTACCTTTCAGACATTTGGAATTTTTCTGCTCTGCCAG-ACTGGTTCCTTGGTTCACTATAAAC
GACCTTAAACACGACGCCCTTAAACAAGATATTAGGTAGTATGCGCTAACCATGCCCACGTTTGAAGACAATCAAACTAA
TTGAGTACTGAATCATGCCCAATTTTGGAAGAAAAAAAATCATGCTCATCAGGCCGAAATTATAAACTTTTGGGAAATAA
CAATGGCAAAACTTTCATTTTGGCAAAAAGGATAATATGTGATGCCAGAAAACACATGACTGCACATAAGAAATCCCTCC
AAAAATAGGTACTCCCTCTGTAAACAAATATAAGAGCGTTTAGATCACTACTGTAGTGATCTAAACGCTCTTATATTTTT
CTTTACGGAGGGAGTACTTACTGAAAAAAAGATACTCAACTCACACTAGTACCACGGAGCTCACCTGAAGACAGAAAATG
AAAACAATGACGGAATTCTTTGTATAGATTAAGCTGCAGGTTTCCTTGAACATGACCCAGGCAGAAACCCCCAAAAAATA
GGCAGACAAAGTGAGTTGCAGAAATACTTAACCAGTTGCTTCGAATTTTGGGTCCCTATATTGTATACAGGCTCCACATT
TTATTATATGGAGTTACTTCTGCAGCTTGCTACGAGTTTCTGTTGAAAAATACACATGCTA
>chr4B_501
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--------------------TGCGGCATACGCTCGGCTCGGTCACGCGGCTCGCTGCCATATTCGGTCCCTTTTCAAACT
TGGGGTCCGTGCGCGTCTCAAACCGCTGCCCCGGTTCGCCCGCGATCCTCCCTCCTTGGCACAAGATTTTAGGGCTGAGC
GACGCGACCAAATCGGCTTGAGAACTTCTCAATTCTCAATAGGCGCTAATAGGCGCCGGCGCACTGGCCGAAACTTTCGG
CCTCGCATGGGCCACTGGATCTGTCTAACACGGAGCGCGCGGAACCGCTCGATCACGCACGTATCGGACGGGCTTGATGT
GTACCCGGTCTTCGTCTTCCTCATCCGCCCTGCATCGTTGACTCTGGCCGCCGTCGCCGTCTGCCACACCCCGCGTTCCT
CGTGGCTCGCTGCATCGGTGGCTCGCCATGGCTGCCGCTCGCCGCTCGCCGCCGCTCGCCGTCGCCACTCGCCGTCGCCA
CTCGCCGTCTCCGCTGCAGCAAAAAAGGTACCAGATGCATAAAAAACAAGCGGTGATGGCGACCGCCAGGTCCAACAATG
TCGGGGCCGCCGGTTCCAGCATCCGTCGCAGCACCATTGGTGCATAGAAAAACAGTCATGTGCATTAACGGCTCGCCGCT
GCAGCTTTTTCGTCGCCGGTCTCTGGTTGAAGCTTTTGAAATATATGGTTGAACCTTTTGTGTTAACGATTGTAACTTTT
TGCGTTTCCTGTCACCGGTTGAAGCATTCTATATCGCCGGTTGAAGCTTCTTTTCTAGCCGGTTGAAGCTTTTTTCGTCG
CCGGTTGCAACCTTTCTGATTTCCAGTCACCGGTCACCGCCGTGAAATGGTGGTACAATTACTGTCTATGGTAGTAGCAA
ACATTCTGTGTGGTTGCAGCAAAAAACGTTGTCATGGCTGTCAAAAAGGTTGCATCTTCTTCATGAATGATGTAGCTTTT
CTCTATCGTTCGGTTGAAGCTTTTTTCATTAAAGGTTGTAGCATTTTATATAGACGGTTGTAGCTTTCCTCGATAGCACT
GAACGCGTACAGCTTTCTGTATACACGGTTGAAGCATTTTTAATCTTGGGTTGAAGCTTTTCTGTCAACGGTTGCAGCAC
TCACCAGCCTCCCCAGCTATCGCACATCTCTGATTGAAGCAAAAAATACCATCGGTTCCAGCAAAAAATCTCTATGATAG
TAGCAAAACCAAAACACAGTTGTAGCAAAAAACAGTCATCCGCCATCTCGCCGTGACGTCGAGGTTCCAGCAAAATTTGC
GTCGCGGGGTGCAGTCCTGCCATGGCTGGTTGCAGCTCCGGCGTGGCCGGGTCCGGCGAGGTAGGGAGAGCTCCGATGCA
CGCGGATCCGCGCGGATCTGGTCGAGGGCGGCCAGATCTGCTGAACGGCGGCGCGCCTGAGAGGCCTGCGGGCGCAGGGC
GATGCGTTGACCATGGCAGCAGGGAGAGAGAAAGAGAGAGATGCGCGAGAGGAAGAAGAGAAAAGGAAGGAGGACTAGTC
GTCTCGGGTCCATCGCGCCACGTGGTTGCTCGCGAGTGGGTCGCATCGCGCGTGCGTGGACTGGACCGGCCGAAGCTTCG
GCCGGTGCCCCGGCCCCAAACGTTTCCCATTCTCAATCCCTCCGACGTCTCCTTCCCTTTTCCTCTCTCCAGAAGCTTCA
CTCCACTGGAGATCCGTCGCACGCACCCACCAAACAAACACCCGGCCCGCACGGGATCCGGCGCCACGGTTTGGAACCCC
GAACGAAAGCCGCTCTTTATTTATTCCGCTCCTCTCCTGTGGAGCGTGCCGCAGCTCTGAACCCGGTTCCGTCCACTGTC
TGTCGCCCATCCCGCGGCACCCCCACGCACGCGCCACAGCC----GCCGTCCGCGTCCGCGTCCACACGCCCCACGCC--
----GGCGCCGAGGGAGGATGGAGAAGGCCCTCACCAAGCTCGGCAGCTTCACCATCCCCCGCAAGGCCAAGCAGGAGCT
CTCTGCCATCGGCGGCGACATCTCGGTCAGTGCTCTGCTCTGCTCTCCTTCCTTCACACCTTTCCCCGTCATCTTTCTCG
CCTTCGTGGCTTT------------------G------TTCGTCATGGTGAATCTCTTCTCGTTCTTGGTGAATCTCTTG
GACTAGGTAAAATGCCGTTCCTGATTTCCCGGTTCGCCTGCTTGTTTCTGGGAGATTTCTACGGGTTTCCGTTATCACGG
GGGTGGATC--------GACGGATTCTTTTTTGTTGCTCAGTTTTCTGTTTTTCTCGTCCCCATCTTTTTCTGCGGCAGT
TAAATTTCAGAAATAATCTGTCTGTCAACATTTCGTGGTTCACATGTTGTTACTGCTACTAACCAAGAAAATTTTGGGTT
CTTGAAC---GCATTCATCTGTAGATCTTTCTCTTATATTCTTCCTCC-TTTAGGCCAGGTTAGATTCGTTCCTTTTCCC
ACCAAGACCAGCGAAAGTTCTTGCTTTTCATATGCAACC-TTTTTCCGAGTGGACTGCCATATGAAAATCATTATTTGAT
TCGATCACACTTCTGCATTCGCTGTACCGACTCAGTAGTAGTACATTTTTGTGCATTCT------------AAGTTTAAT
TATTACTAGACTACACTC---TAGTTCCAACATCCAAGTGGTTCAGTTCATCATTCACAAGTCACAGCGAATAACCCAAC
CAC-TCTGATTTGCAGCGCATCTCAAGCACCGTGGAGGAGAAGGCCAAATGGGTGTTCGAGAAACTCAAAGGTACC----
-ATCGATAGCCCTGCCCCCTAATTTCTCCAATTTCCGTTCAGTGGTTGCTTTGTGGCTCAGAAAATAGCAGTTAGTCTGA
AGCTACATGCCACGTCGTCTTAGCAACATCTTCAGTACACTTGTCCATCGCTGTTAGCAACGCTGTTTTTCTTGCTGATG
CGTAACACCAAAGCAAAACAAG-GAGTGCTTTCCTTAATACG------------CACATAGCCTTTCTTCACGATTTGGA
TCTGGCTCCGGCCCTGTAGCTCTAATCCAAGTACTCTTTTCGATCTGCAAAGTACTAGCAATACAATGAGTGACGCTGAT
GCACATGGGGGCCAAACTGAAATGGGTCCAATGTTTGTTGACGCAATTATGCAAAAGCTCCTAGGAGGATATAGTGCAGA
GCAGGGGGGACTTGCTCACCTAACATCTTGTTTTACTTGCAATCTTTGCACTGGGTCTGTTGAGGTCTTTGGCGGTATTA
GCAAGGCTGTCTTCAGCTTGTCATGGGGTTAGCAAGCACCAGCCAGCTGATTTGGTAGTCTGTAGTGCATGGTCTAATCA
ATGTTTTCTTCTAAGCAGCCCCTAATCTGTACTCTTACAGGAAGCTGCGAACAACTAGTGGTATACTCGGATCCGTAATC
CGACCGCTCACGTGAAAACATTGCGCGAAAAGACAGTAGTTTCTTAAATAAAATGCGAATGTTCTGAAGTACTCCCACCG
TTCACTATTATAAGATGTTTTGGATATTTCAATATGGACTACATACGGCCTGAAATGCCTGAAATGAGTGAACAAACACG
CTAAAATGCGTCTATATACATCCGATTCAGAAAAAGGTTAAAACGTCTTGTAAGCTATATACATCCGATTCAGAAAAAAG
TTAGAACATCTTATACTCCCTCCGTTCCAAATTACTTGGCCTCCATTTGTCTAGATATGGATGTATCTAGACACTAAATA
AGTATAGATACATTCGTATCTAGACAAATGAAAGTCAAGTAATTTGGAACGGAGGGAGTAATATTGAACGGAGGAAGTAG
TTTGTGAAATAAAATGTGAATGCTCGCAAAGCAGATCCGTTGGCAAGTTTTTTTCCACTTGCAGGCCATCTTCAATTGTA
CCTTCCAGTTTGTTTGTTTT-TTGGTTTAAGTAGGTGTTAGGAGCTAGGGTTCTGCCCGGTCTTGGCCGTAGGCAGTAGG
GGAAAGTGGGGGCTGGGCGTGGCGATGAGCGGCCGCGCCGGCGGTTGGGCGCCGTCGCGGGAGAGGAGGGAGATGGCGGC
GGCTAGGGTTAGAGGCGGCTAGGGTTCCGGCTCCTCTGGGAGCCGGGCAATAGAGATAATAATCTTCTTATTGCTTAATT
CCAAAAAGAGTCTTACAGCCTATATTTATAACCTAAATAACTTGCATAAGAATTAATCCTAAGATAACTTGTGGGCTAAG
ATTGCCCGGTGGCCTCTACGGCCGTAACACTTCTCCCCGCCTGCACAAACAGCTCGTCCTCGAGCTGTAAGGTGGGGAAG
CGCTTGAGGACTCCTCGAGGCGATCAACCAGCGTCAAACACCTTCTCAACAGCTGGGGCGGTCAGGTCGGCGGCGACGGC
GTCCTTCGGAATGTAGTCTGCAACCTCCAGGTAGAAGAGTCGCGGGCAGGCATGGCCGGGCGTGTAGGGCTCGTCGCAGT
TGAAGCACAACCCTTGGTGGCGACGCTCGAGTAGCTCGGCTGAGGTGAGCTGGCGGAATGGGCGTCCCGCGGTCGCGGCG
AGGGATGCCGCAGAAGCCTGCGCAGGCCGACCCTGCACGGAATCCGGCCCGGGTAGCGACCCAGCGGTCCGGGACGGTGA
TTCCTGCTGGATGGCCACCGCGCGGCGCTCGAACGCGCGGGCGTAGTACATGGCCGACTGGAGATCCTGGGGTCCGCGAA
GCTCCACGTCGACGCGAATGTGATCCGGAAGGCCGCCGACGAAGAGCTCAGCCCGCTGCAGGGCCGTCATACCTGGCGCG
TGACACGCCAAGGCCTGGAAGCGGTCGGCGAAATCCTGCACCGTGGAGGTGAAAGGCAGGCGACCCAACTCGGCCAATCG
GCTCCCGCGTAATGGCGGTCCGAAGCGAAGAAGGCACAGCTCGCGGAAGCGCTCCCACGGGGGCATGCCGCCCTCGTCCT
GCTCGAGGGCGTAGTATCATGTCTGGGCGGCCTCGCGGAGATGGTAGGAAGCCAGCCAAGTGCGCTCCGACGCGGGTGTG
CGCTGCCCGCGGAAGAACTGGTCACACTGGTTGAGCCAGTTAAGCGGGTCGTCCGAGCCATCATAAGTGGCGAAGTCGAG
CTTGGCGAACCGGGGCGGCTGCTGGTTTGGCGCGCCATGGCCCACTGCCTCGGCGGTGCGGAGAGCTGATGACGGTGCTC
GGTCCATGGTGGGAAGGCCGGCGTAGTTCCCCGTGGCGCCCGACGCCTCAGGCTGCAACTGGGTATCAGCTAGCTTCGGT
TCGATCATGTCTTCACCGCCGCCAAGCCCGTCTCTTCCGCTGCCGGTCACCTTGTCGCCTCCGGCGACCACCACGACCGT
CGCCCCGCTCCTGCCCGCGCCGGGATCCTCTGTCGCGCCCGCCCCCGCCGTACTCACCTGGGAGGAGGTGTCCGGGGTGC
TGCGGGACCTAACCCAGGCGGTCCAGGAGATCCACCTGTTCTTGGCCGGGTCCTACGGGCCGCACTCGGTTGCGCCGCCC
ATCGCCACCCCCGCGCCGCCGTGGCTGCCGTGTCAGCCGCCGCACCAGGCGGCCTTCGCCGCGCTCGCCAGGCCGCTGCA
ACTGCCATCCATCGCCACCACCGCCCAGCCTTGGCTGCAGTGGCAGCCGCCGCTTTTGGCGGCCTCCTCCGCGACCGGCA
CTCCGACGCAGCAGCCGTTGCCGCTGCCCGGCGTGACAGCGCAGCAGCCGCTGCAGCTGCAGCAGCCATCGCCAGTCAGC
TCCGCCGCCCAGTATGGGATGCCCTACGATGGGAGTGCGACGATCTCGTTCCCATCAGCGCCGCCGCCATCCCAGGGCGT
CCACATCCAGCAGATCAAGTCCCTGTCGTCGCCGGCACCGCTTCCGTCTTGGATTACTACCCGCCACGTGTCGGCGGCTG
TGAGGCTGCAGGCTGCTGCGCGCGGCCTCCTAGCGCGTCGGCGTGTGCGGGAGATGCGTGGTCTGTAGCTGCCGCTCCTC
CAAGTTGCCCTTCGCTGCGCAAAGGACCTCGATCTCGTCCACTGCGTCGGGGATCTTGGTCATGCGGTTTCCCCCACGGG
CGGCTGGCACGTTGTTTTCCCCGCGGGCAACGACCTCAAAGTCTGCGACATCGGCGATTGGGGGGGCACACCCCTCCTCG
TCATTCTCAATCGCAAGCCCTCCACTCTTTCCTGTGCGGTGCAGACCAACAGCCGTCCGGCGGGGCGAAGGCAGGGTGTC
ACCAACAGGAGCGCACCGCGTAGCACCACTGCTTTCCGCCGCCGACCACCGCGAGGGCGCCTTTGCTGGTCGCTCTTGCG
ACCACTTCCAGATGGCCATACACATGCACTCCTTTGGTCCAGGTGGTGTCCATGGGATCCAGGTGGCTGTACACGTGCAC
GTTTGACGTGCGGATGGTGTCCACTTTTTGTTAAAGGGTCCAAAATAAAGCGTCTCAGTCCATTTTAGGTTGAGAATAAT
AAAACAAGCCGAGATGTAAAAGGCTTGTTTTTAGGTGTTAGGTTTGTGTTGCGTCGAGTCATGGTTATAAGTTGGTTAGG
CTGCAGCTCGAGGACAAGCTGCATGTCCAGGTGGGGTGTAGTGTTAGAGTACGTAATAGGCTTAATGGGCCCATTAGTCT
TAGGGTTAATTAGAGATAAGGGTCGCTTGCTTAGCGGTCAAGTAAGTCTTGCTTGGGAGTCAAGTAAACCTCTCTATATA
AAGAGAGGAGATGTATCAATCTAATCAAGCAAGAATTAAGAAGGAAATCCCTTCCCTCTTGCCCGGCCGTGGGCAAAAAG
GCCCCCGGCCGGCCCTCTCGCGCCCTCCTTCTAGCAGCGCCATAACAGTAGGTATACGGTATGCATTGCTCTGAGACCCC
TTTCTTCTGATAAAAAAGTCCTTCATATGAATTTCCCATTTTCACACTTTGTTTGATTGCAATTCCAGTCTTGTAGTATA
CATAATTCGTCATTTACACTTTACACACAACATTCTCCATATATTTGAACTTTGCTCAAGCGCTCGAAACTGCTGCTTCT
GAATTCCCTTCTGCGTTTCAATATGTTTGTGGCATTCTCATGCCATGGTTCACAAGTTGCTATTAGGTCTATGCAATTCT
AGCTAGTGACAATTGAATAATTGCTACATAAATGTCTACTATATATGGACTACAAGTGGCTGACCCTATTTCTTTCTTAT
TCAGGCAAACCAAACAAGTCCCTCTCTGACCTGCTGCGCGAGTACAACCTCCCTCCGGGCCTCTTCCCTCGGAACATCAT
CTGCTACGAGTACGACCAGACGAGCTCGAGGCTCGTGGTGCACCTGGCCAAGCCCTGCGAGGTGAGCTTCAAGGACTCCT
CCATGATACGGTACGCCACCCGCGTGAAGGCGACCCTGTCCCGAGGCAAGCTCTCGGCGATCGAGGGCATGAAGACCAAG
GTGGTGGTGTGGGTGAAGGTGACCACCGTGAACCTGGAGAGCTTCCGGTCCGACAAGGTGTGCTTCATCGCCGGCGTGAA
GAAGCTGAGGCAGAAGGACGCCTACGAGGTGCCCCGCGAAGCCGCCTCCGTCGAGGAGTTCTGAGCTCAG-TCTGATGAT
CCGTCTTCCTATGATCCTATCCATAGTCTCCATGATTCGTGCCATTCTTTTGAGTCCCATATGGTGTGTGGTTCCTGAGG
ACGTGCTGGTGATTAGATTGGTGGGCTGA---TCGGCATGTCTGTACATTGGATTTGTTCTCCTAAGGAAA---------
--------------------------GGGTGGTGTCCCAGTAATGTGAACATTTGGCATGTGTTCTGGCTTTGTGTTGCT
CGTCTGTCGGGGACCTGTGTTTCAGTGCTTTATGGTGCTGCGTGTGCCGGCTGCTGGCGGAGGTGCATTGCACTTTTGCC
GAAATAATTGTTTCAGCAAGCTTTCAGACATTT-----------------------------------------------
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>chr4A_839
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---------CCGCTCTTTATTTATTCCGCTCCTCTCCTGTGGAGCGTGCCGCAGCTCTGAACCCGGTTCCGTCCACTGTC
TGTCGCCCATCCCGCGGCACCCC-ACGCACGCGCCACAGCCAGCCGCCGTCCGCGCCCGCGTCCACACGCCCCTCGCCGA
CGCTGGCGCCGAGGAAGGATGGAGAAGGCCCTCACCAAGCTCGGCAGCTTCACCATCCCCCGCAAGGCCAAGCAGGAGCT
CTCCGCCATCGGCGGCGACATCTCGGTCAGTGCTCCTC----------------CACACCCTTCCCCGTCATCTTTCTCG
CCTTCGTGGCTTT------------------GTTCTTGTTCGTCATGGTGAGTCTCTTCTCGTTCTTGGTGAATCTCTTG
GACCGGGTAGAATGCCGTCCCTGATTTCCCGGTTCGCTTGCTTGTTTCCGGGAGATTTTTACGGGTTTCCGTTATCACGG
GGGTGGATGGA----TGGACGGATTCTTTTCTATTGCTCGGTGTTCTGTTTTTCTTGTCCTCATCTTTTTCTGAGGCCGT
TGCAGTTCAGAAATAATCTGCCTGACAACATTTCGTGGTTCACAT---GTTACTGCTACTGACCAAGAAAATTTTGAGTT
CTTGAAT---GCATTTATTTGCAGATCTTTCTCCTATATTCTTCCCCCCTTTAAGCCGGGTTAGATTCGTTCCTTTTCCC
ACCAAGACCAGCGAAAGTTCTTGCTT-TCATATGCAACC-TTTTTCCGAGTGGACTGCCATATGAAAATCATTATTTGAT
TCGATCACACTTCTGCATTCGCTGTACCAACTCAGTAGTAGTACATTTCTGTGCATTCT------------AAGTTTAAT
TATT-----ACTACACTCTAGTAGTTCCAACATCCAAGTGGTTCAGTTCATCATTCACAAATCACAACGAATAACCCAAC
AATTTCTGATCTGCAGCGCATCTCAAGCACCGTGGAGGAGAAGGCGAAATGGGTCTTCGAGAAGCTCAAAGGTACTGTAC
TATCGATCGCTCTGCTCCACTATTTCTCCAATTTCTGCTCAGTGGTTGCTTTGTGGCTCAGAAAATAGCAGTTAGTCTGA
AGCTACATGTCATGTCGTCTTATCAACATCTTCAGTACACTCGTCCGTCGCTGTTAGCAACGCTGTTTTTCTTGCTGACG
CGTAACACCAAAGCAAAACAATTGAGTGCTTTCTTTAATACGACTGTATCCATCCACATAGCGTTTCTTCACGATTTGGA
TCTGGCTCCGTCCCTGTAGCCCTAATCCAAGTACTCTTTTCGATCTGCAAAGTGCTACGAATACAATGAGTGACGCTGAT
GCACATGGGGGCCAAACTGAAATGGGTCCAATGTTTGTTGACGCCATTATGCAAAAGCTCCTAGGAGG--ATAGTGCAGA
GCAGGGGGGACTTGCTCACCTAACATCTTGTTTTACTTGCAATCTTTTCACTGGGTCTGTTGAGGTCTTTGGCGGTATTA
GCAAGGCTGTCTTCAGCTTGTCATGGGGTTAGCAAGCACCAACCAGCTGATTTGGTAGTCTGTAATGCATATTCTAATCA
ATGTTTTCTTCTAAGCAGCCCCTAATCTGTACTCTTACAGGAAGCTGCGAACAACTAGTGGTATACTCGGATCCGCAATC
CGACCGCTCACGTGAAAACATTGCGCGGAAAGACAGTAGTTGCTTAAATAAAATGTGAATGTTCTGAAGTACTTCCGCCG
TTCACTATTATAAGATGTTTTGGATATTTCAATATGGACTACATACGGCCTGAAAT---------GAGTGAACAAACGTA
CTAAAGTGCGTCTAC-------------------------------------------ATACTTCCGATTCAGAAAAGAG
TTAGAACATATTATA-----------------------------------------------------------------
------------------------------------------------------------ATATTGAATGGAGGGAGTAG
TTCGTTAAATAAAATGTGAATGCTCACAAAACAGATCCGTTGGCAAGTTTTTTGCCACTTGCAGGCCATCTTCAATTGTA
CCTTCCAGTTTGTTTGTTTT-TTGGTTTAAGT------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------AGGTATACAGTATACATTGCTCTGAGACATC
TTTCTTCTGATCAAAAAATCCTTCGTATGAATTTCCCATTTTCACACTTCGTTCCACTGCAATTCCAGTCTTGTAGTATA
CATAATTGGGCATTTACACTTTACATACATCAATCTTCATATATTTGAACTTTGCTAAAGCGCTCGAAGCTGCTGCTTCT
GAATTCCCTTCTGCGTGTCAATATGTTTGTGGCATTCTCATGCCATGGTTCACATGTTGCCATTAGGTCTATGCAATTCT
AGCTAGTGACAATTGAATAATTGCTACATAAATGTCTACTATATATGGACTACAAGTGACTGACCCTATTTCTTTCTTCT
TCAGGCAAACCAAACAAGTCCCTCTCTGACCTGCTGCGCGAGTACAACCTCCCACCGGGCCTCTTCCCTCGGAACATCAT
CTGCTACGAGTATGACCAGACGAGCTCGAGGCTGGTGGTGCACCTGGCCAAGCCCTGCGAGGTGAGCTTCAAGGACTCCT
CCATGATACGGTACGCCACCCGCGTGAAGGCGACCCTGTCCCGGGGCAAGCTCTCGGCGATCGAGGGCATGAAGACCAAG
GTGGTGGTGTGGGTGAAGGTGACCACCGTGAACCTGGAGAGCTTCCGGTCCGACAAGGTGTGCTTCATCGCCGGCGTGAA
GAAGCTGAGGCAGAAAGACGCCTATGAGGTGCCCCGCGAAGCCGCCTCCGTCGAGGAGTTCTGAACCTTGATCTGATGGT
CCGTCTTCTTAT--------CCATAGTGTCCATGATTCGTGCCATTCTTTTGAGTCCCATGTGGTGTGTGGTTCCTGAGG
GCGTGCTGGTGATTGAATTGGTGTGCTGAGGCTAGGCATGTCTGTACATTGGATTTGGTTCTTCCTGATGAAAGGCCCCC
ATGCATGTTCTCTCATCATTTCGCATGGGTGGTGTCCCAGTAGTGTGAACATTTAGCATGTGTTCTGGCTTTGTGGTGCT
CATCTGTCGGGGACCTGTGTTTCAGTGCTTTATGGTGCTGCGTGTGCCGGCTGCTGGCTGAGGTGCATTGCACTTTTGCC
GAAATAATTGTTTCAGCAAGCTTCAAGACATTTGGAATTTTTCTGCTCATAAAACACCGGTCCCTTGGTTCACCATAAAC
--------------------------------------------------------------------------------
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-------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSS------------------------------------S---------S-------------
-----------------S--------S------------------------------S-----------------S----
-----------------S---SS-------S-S-S--SSSSSSSSS-SSSS-SS-SSS-SSSSSSSSSSS-SSSSSSS-S
SSSSS-SSSSS---------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S--------------------S---------------
--------SS-----S---------------------------S---------SSSS-SSSSSSSSSSS-----------
---------------------------------S-----------------------------S----------------
----------------------------------------------S-----------------------S---------
--------------------------------------------------------------------------------
---------------------------------------SSS--SS---------S-S----S--S--------S----S
--S--S-SS----SSSSSSSSSSSSSSSSSS-----------------S-----S--------------------S----
--------------------------------S-----------------S-----------------------------
--S--------SSSS-------------------------------------S------------------------S--
--------------S-----S------------------------------SS-----SS------------S-------
-----S-SSS-----------------------------------------------------S----------------
--------------------S-------S--S------SS--------------S-------------------------
------S----------------S-----------------------S-S-------S-SSSSSSSSSSSS--S------
------------S------------------S--------------------SS--------------S-----------
S------------------------------------------------------------------------------S
----------------------------S-----------------S------S-------S------------------
--------------------------------------------------------------------------------
-----------------S------------------------S-------------------------------------
------------------------------------S---------------------S---------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
S-----------------------S--S----------------------------------S-------------S---
--S----------------------------------------------------------------------S------
-----------------------S-------------------------------------------------------S
------------------------------------------------------------S-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S------------S-----------------------------------------S
--------------------S-----------------------------------------------------------
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-------------------------------S------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S------------------------------------------------S----------S---
S------------S-------------S-------------S----------S--S------S-----------------
------------------------------------------------------------------------S-------
-----------------S-S----------------------------SSSS-S---S---S-----------S------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_457
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------ATGCAACACGCGGAAATAGC-----------------------
--------------------------------------------------------------------------------
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>reverse_3280
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
TATCGATCGCTCTGCTCCA-------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3064
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----TCGCACTTCTGCATTCGCTA--------------------------------------------------------
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>reverse_4345
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------------------------AGCAAAGCAGATCAGTTGGC------------------------------------
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>forward_3189
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-------------------------------------------------ATCCGTCACAAGTCACAGCC-----------
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>reverse_8268
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---------------------------TGTGGTGTCCCAGTCATGTG---------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------
