>input_sequence_31266
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----------------------------------------------------ATGGAGGACTATTTTGAGCGCATACTAA
ACCTTGCTTGGCAGTTTCGACAACACTTGACACAATTCATAGGTACCA-GCTGAGCATACAATGTTTTGATCGATTTGAA
TCATCAGGGGGAAACAGACTTGCTGATAGTCCAGTACACATTGCTGTCTTGTTTCTTTGTTGATTCTGAATCACCGTTTT
GTCAGTTATCTTTTCCTTCTCTGGAGCAAACTTATTCTGGCATAAGATTTTGTTTCTTAGATATTTAGATACTA------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GAT-
---------ATGTGTTTCATCCACTCTAGAAGAAATCTGATCAAGATGGGAG-TTTCTGTACAGTGTTGTTTCTGTTGAG
TTTC-TTCCTTTATTTTTATGTGCTGGTATTTTCTTTTTCTTCACAGAAAATGTGTTTGGGTGCATTGATTGGATTCCTC
AACGTCACGAAGTCCAATTCTCTGCTTACTATGGAGGATCATTGCCTGACACTGAAAGATATATTCATGGACAGAGTTCT
GCGTTGTCCATTAGCAATACTACAGAAGAGTTATCCATTAGTAGTACTACAGAAGAACAGGCTGCACATAGGATATCTGA
GATCACAATTTTCAGAAACGGCGTATCCGAAATTTGTCAAAGGTTTGGTATTCCCGTGCCTTCTTTAATCAGATAAAGTT
AATGCTTGCAGATAGTAATATTTCTTATCACACTAGCTAACCATGTGTTTTGAT----GTTGTTTCTCGCGTCCACTTTG
CAACTTTGTGCTGTCAGATCATATGCTAGCTGGTCATCCTATATTTTGCGTGGCTACAGATTGGGACAAAGATTGGCACT
CCATTTGCGAGGGCTGTGCAGTCTCTTTGTAAATGAGATTAATA------CCAAACTAACCAGGTTGGTTACCGTCTTCT
GACTTCCAACTTCGTTGTGTTGATCCAAGTGCTCAAGTCCATTCAGTGAAACTTCTGTTCGCAGATGGTTGCTAAGATCT
GGTGCATGCTCACAGGTCCTTGCATCGTTTCTGGACAACATTACAAGGCTCTTCTGAAGATATAGGGTGGTTGCAAAGAA
CTCAAATGTCACTTTATTCAGTTGATGGCACATCTCGCTTTCAGGAGCTTTTGCATGATGTGAGGTGAACTGTTTTCCCT
GCCTAGTGAAGTGTCAGTTAATAAGGAGATGGCATAGTGTTTAGTAGGAGTATTATTCAGTTATTCTTTTGCATTGTGTT
TT-TTTTTTCAGAAATGGCATGCATTACCTGCCTGATACACTGGTTTACTTGCTCATCCCTGGTGAGACATCTTTCTCAG
TTTTCACAGATAACCTTAATATGTCGTGGTAGCTTGATGGTGACTCACAGCGTTCCTCTATGCAGGCCTTTTTAGCAACC
ACAGTCCACTTTACTTTCTCAACACTAAAAGATTCTTTTCAAAGATGGGGCTTACTTGCCATATTGCAAAGATTCATAGT
GAGGTAATTCAGCTCAACAGGGTGGCATACAAGATCTTTCTAGTTTGTCGACCTATATTTGTTTCGTGCTGTGCATGTGC
CGTAAACCAAGGAATGTCTGTCTCTTTGGTTCTCGTATCTTCCTCGTATATACTGCAGTGTATACTTTACAAGTTCGTGT
TTCATTCTGTCACCCCCTGTAGGTATGTACTTACCTTCCATTTTGTTCAGGCATCAGTGGAGAAAAAT----GCACGGGA
ACTGAAACTATACATCGAGGAGCTCTACTGGGGATCTGGCAAACAGGTTTTGCTCCTGGGACATAGCAAGGGCGGAGTCG
ATGCGGCTGCCGCACTCTCGTTGTACTGGTCCGAGCTCAAGGGCAAGGTCGCTGGTCTGGCACTGGTTCAGAGCCCGTAT
GGCGGCACCCCCGTGGCTTCCGACATCCTTCGAGAAGGCCAGATCGCTGACAGGGAGACCAGGAGGATCATGGAACTGAT
AGTGT-----GCAAACTTATCAAGGTC------TGTCTGTGTTCCCTTCATTTCATTACA----------TTTCATGTCA
TGCATATTTCCTAACAAGTGGACGGACGCAGGGCGACATGAGAGCTCTGGAGGATCTCACGTATGACAAGAGAAAGGACT
TCATTTCCAAGCACAGGCTCCCGGTGGACGAGCTGCCGATCGTCTCCTTCCACACAGAGGCCAGCACCGCCCCGACGGTG
CTCGCGACGCTGACCCGCATCGCCCAGGCCGAGCTCC-----TCCCGCTGCTCACGGTGGCACCCCTGCCACGCTTCCTG
TCCGAGTAT----GCAGAGTCATTGCTCGCTTCTCTGAAGCTGCCCGTGGTGATGCCGGTGTCGGCTGCAATGGCGGCCA
CCGCGCTCCACCTGCGGCTGCGGTACGGGGAAAGCAGTGATGGCCTGGTGACACGGCGCGACGCCGAGGTCCCAGGGTCC
GTGGTGGTGCGGCCCGAGCGGAGGCTGGACCATGCGTGGCTGGTGTTCTCGACGCTGAGCCGGCGGCGCGCCGAGGCCGA
TGCCACCCAGGTGTGCGAGGCCCTGCTGGCCATGCTCGTCGAGATCGGCGGCAAGAGACGCCGCTGCCTCATCGAGGAGA
TCGTTACTTGA---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1D_1_TraesCS1D01G396700
CGAAATTCCCCTGAGAAAGACAGAGATATCCTAGCTCCGCCGTTCACTTCTCTCCAGAAGATCTTGGTCTGCTGGGTGCA
GCAGGAAAGGGGTAACCTTGCTGCTGAAGCGGACGAGCTTTTTTCTTCTCCAGAGAGAAGAACGGATTCCTTTCTTCATC
ATTAGTACAAATAGAACGCATTGCAGTTTCACTTGCGTGAATTCTTATAGCCAACCTGTTCGCGTCTCCTTTGAGAGTTG
GCGACGGCAGTAAATAGAGCATTCAGTCCTTCATGATGTTGCCTGCCATGGTTTATTTATTTCATTCAGCTGTAATCTTT
TGGTATTCTTGCCTAGTTACGTGGTAGTAGAAAAAGGTTCGAAGAGAAAAACAAGCCTTAGTGTCGGCACTGTGAAAGGA
GCATCTGTCCCGCTGAAATGGCAATGTTTTTCTCAACGGACAACTGACTTCCTTCCTCACCATTTTCTTCTTCCTTCCGT
TCTCTTGCTTGTTTTTATATAGCTTGTACTGTATTCTCCTGTCCTCTTAATATAATACATGCAGCTCTTCTGCATGGTTA
GAAAACACACACACCAGGAATCCAGCTTCACTTGCGGGGAGTTGTTGTGTGCTGTGAATTTTGATATCTACTTACTTGTT
TGCGTAGGGCAGTAGACAGATTTCGTGTCAACATTCAGTCCTTAATGGTGTTGGGCTGTTTGTTTTAGCTTATGTATCTC
ATGCGGCTGTAAGCTTTTGGCATCCTTGCCAAGT----TGTATGTGCTAGCACCTTCAAGAGAAAAACAGAGCACCAATA
TCGGCACTCTAGTTTAGATCACCTAGGATTGTTGCTATTAAAGACGCCTTGCCTGATGATATGACAGTATAA------AT
AATATCATGTCAACGACACACACACCCTCCTCTGCGGGTACATGCCGACGTGCTGATATGATCCTGTTTTCTAGGGCTAT
AGCGAATCAGCAAGAGTG--ATGCTCGACATTATTTGCTATCTGGAACTCAAATGGAGGACTATTTTGAGCGCATACTAA
ACCTTGCTTGGCAGTTTCGACAACACTTGACACAATTCATAGGTACCA-GCTGAGCATACAATGTTTTGATCGATTTGAA
TCATCAGGGGGAAACAGACTTGCTGATAGTCCAGTACACATTGCTGTCTTGTTTCTTTGTTGATTCTGAATCACCGTTTT
GTCAGTTATCTTTTCCTTCTCTGGAGCAAACTTATTCTGGCATAAGATTTTGTTTCTTAGATATTTAGATACTA------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GAT-
---------ATGTGTTTCATCCACTCTAGAAGAAATCTGATCAAGATGGGAG-TTTCTGTACAGTGTTGTTTCTGTTGAG
TTTC-TTCCTTTATTTTTATGTGCTGGTATTTTCTTTTTCTTCACAGAAAATGTGTTTGGGTGCATTGATTGGATTCCTC
AACGTCACGAAGTCCAATTCTCTGCTTACTATGGAGGATCATTGCCTGACACTGAAAGATATATTCATGGACAGAGTTCT
GCGTTGTCCATTAGCAATACTACAGAAGAGTTATCCATTAGTAGTACTACAGAAGAACAGGCTGCACATAGGATATCTGA
GATCACAATTTTCAGAAACGGCGTATCCGAAATTTGTCAAAGGTTTGGTATTCCCGTGCCTTCTTTAATCAGATAAAGTT
AATGCTTGCAGATAGTAATATTTCTTATCACACTAGCTAACCATGTGTTTTGAT----GTTGTTTCTCGCGTCCACTTTG
CAACTTTGTGCTGTCAGATCATATGCTAGCTGGTCATCCTATATTTTGCGTGGCTACAGATTGGGACAAAGATTGGCACT
CCATTTGCGAGGGCTGTGCAGTCTCTTTGTAAATGAGATTAATA------CCAAACTAACCAGGTTGGTTACCGTCTTCT
GACTTCCAACTTCGTTGTGTTGATCCAAGTGCTCAAGTCCATTCAGTGAAACTTCTGTTCGCAGATGGTTGCTAAGATCT
GGTGCATGCTCACAGGTCCTTGCATCGTTTCTGGACAACATTACAAGGCTCTTCTGAAGATATAGGGTGGTTGCAAAGAA
CTCAAATGTCACTTTATTCAGTTGATGGCACATCTCGCTTTCAGGAGCTTTTGCATGATGTGAGGTGAACTGTTTTCCCT
GCCTAGTGAAGTGTCAGTTAATAAGGAGATGGCATAGTGTTTAGTAGGAGTATTATTCAGTTATTCTTTTGCATTGTGTT
TT-TTTTTTCAGAAATGGCATGCATTACCTGCCTGATACACTGGTTTACTTGCTCATCCCTGGTGAGACATCTTTCTCAG
TTTTCACAGATAACCTTAATATGTCGTGGTAGCTTGATGGTGACTCACAGCGTTCCTCTATGCAGGCCTTTTTAGCAACC
ACAGTCCACTTTACTTTCTCAACACTAAAAGATTCTTTTCAAAGATGGGGCTTACTTGCCATATTGCAAAGATTCATAGT
GAGGTAATTCAGCTCAACAGGGTGGCATACAAGATCTTTCTAGTTTGTCGACCTATATTTGTTTCGTGCTGTGCATGTGC
CGTAAACCAAGGAATGTCTGTCTCTTTGGTTCTCGTATCTTCCTCGTATATACTGCAGTGTATACTTTACAAGTTCGTGT
TTCATTCTGTCACCCCCTGTAGGTATGTACTTACCTTCCATTTTGTTCAGGCATCAGTGGAGAAAAAT----GCACGGGA
ACTGAAACTATACATCGAGGAGCTCTACTGGGGATCTGGCAAACAGGTTTTGCTCCTGGGACATAGCAAGGGCGGAGTCG
ATGCGGCTGCCGCACTCTCGTTGTACTGGTCCGAGCTCAAGGGCAAGGTCGCTGGTCTGGCACTGGTTCAGAGCCCGTAT
GGCGGCACCCCCGTGGCTTCCGACATCCTTCGAGAAGGCCAGATCGCTGACAGGGAGACCAGGAGGATCATGGAACTGAT
AGTGT-----GCAAACTTATCAAGGTC------TGTCTGTGTTCCCTTCATTTCATTACA----------TTTCATGTCA
TGCATATTTCCTAACAAGTGGACGGACGCAGGGCGACATGAGAGCTCTGGAGGATCTCACGTATGACAAGAGAAAGGACT
TCATTTCCAAGCACAGGCTCCCGGTGGACGAGCTGCCGATCGTCTCCTTCCACACAGAGGCCAGCACCGCCCCGACGGTG
CTCGCGACGCTGACCCGCATCGCCCAGGCCGAGCTCC-----TCCCGCTGCTCACGGTGGCACCCCTGCCACGCTTCCTG
TCCGAGTAT----GCAGAGTCATTGCTCGCTTCTCTGAAGCTGCCCGTGGTGATGCCGGTGTCGGCTGCAATGGCGGCCA
CCGCGCTCCACCTGCGGCTGCGGTACGGGGAAAGCAGTGATGGCCTGGTGACACGGCGCGACGCCGAGGTCCCAGGGTCC
GTGGTGGTGCGGCCCGAGCGGAGGCTGGACCATGCGTGGCTGGTGTTCTCGACGCTGAGCCGGCGGCGCGCCGAGGCCGA
TGCCACCCAGGTGTGCGAGGCCCTGCTGGCCATGCTCGTCGAGATCGGCGGCAAGAGACGCCGCTGCCTCATCGAGGAGA
TCGTTACTTGAATTAT---TTTTCTCTCTGCTTGTTTGTTGAGCTAGAACTTTCTATATACATATAGTGAAGAGTCTCTG
TTTTTCTGAGAACGACAACAGATGCAATATCTGATTATAATACGGAGTACTAATTAAGGGCGATGTTATACGTATTACTG
TTACTGATTTACTGATTTAGGATGGTGATACCGGCAACTTCGTTCCCATAGATAGGTTGCGTCAAAAATGATTAAATCGA
AGTTTGCCAACATAATCTAATGACCATTTGGATAACCTTTGAGGATATAACAGAGGCACTGGTGTCCATTTACTAGTACT
TCCTTCGTAAAGAAATATAAGAATATTTAAGATCACTACTTTTAAGAGAATAAGAAATCCAGAATGACCATCTTGATGGT
TAGACAAACATGATTACATCAAAATGCACATATATCCTAATCAAGTACGGTGGAACAGAAGTTAATGAGCCACATGCAAC
ATGTATGTAAATTATCTCTTATTCGTAACCGTTTGTCAAATACATCTAGCTAGCTTTTGCACTTTTGCTGGCATTCGGCC
ATCGTCGTGTAGCAATCACCGCCGTTGAGGATACTTATAGTGCTTCCTTCGTTTCATAATAGAAAAAACGTTCTTATATT
ATGAGACGGAGGGACTAGATCCGAGGGGTAGGTGATACTAGCCTCTTGTCCTTCAAGCAAAAATGGTCCGGTGGTACAAC
AATCTTCTCCGCCTCGTCCGCCCTCCCGTTCGTCGCTTGGCCTATGATTCAAGATTAAAATAGTGTTACATCGTCTATGA
GTTTACATCTGCATCGGTGCCCACCCGAGCCACTCACAAGCAAAAGCACATTGACTGTAAAAACAAGGCCCATCGAACAG
ATTCGGCTTGCTTTTAGCCATTAACCATGCTGGGACCCTAGTGTCAGGGAAACATGAGTTGCTGATGGCCTTAGCGCCCT
CGTAGCCAGCCCCGCTATAGGGAGATTTCTAAGTCATTGAACTGCTCATAAAAT
>chr1A_720
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------C
ATGCGACTCTAAGCTTTTGGCACTCTAATTCTGAATTATGTATGTGCTAGAACCTTCAAGAGAAAAGCAGAGCACCAGTA
TTACCACTCTACTTTAGACTACCTAGGATTGTTGCTATTAAAGACGCCTTGCCTGATGCTATGACTGTATAAGGAGCGAT
GATATCGTGTCAACG--GCACAGACCCTCCTCTGCTAGTACATGCTGATTTGCTGATACGATCCTGTTTTCTAGGGCGAA
AGAGAATCAGCAAGAGTGATATGCTCGCCATTATTCGCTATCTGGAACTCAAATGGAGGACTATTTTGAGCGCATCCTAA
ACCTTGCTTGGCAGTTACGACAACACTTGACACAATTCATAGGTACCAAGCTCAGCCTACAATGTTTTGATCGATTTAAA
TCATCA--GGGAAACAGACTTGCTGATAGTACAGTACACATTGCTGTCTTGTTTATTTGTTGATTCTGAATCACCGTTTT
GTCAGTTAA-----CCTTCTCTAGAGCAAACTTATTCTGGCATATGACTTTGTTTCTTAGATACTTAGGTACTACTCCCT
CCGTTCCTAAATACTTGTCTTTCTAGGCATTTCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAA
ATATGTCTACATACATCCGTATGTAGTAGTCATTTGAAATGTCTAAAAAGACAAGTATTTAGGAACGGAGGGAGTAGATA
CTAGCAAGAATGTGTTTCATCCACTCTAGAAGAAATCTGATCAAGATGGGAGTTTTCTGTACAGTGTTGTTTCTGTTGAG
TTGTTTTCCTTTATTTTTATGTGCTGGTATTTT-TTTTTCTTCATAGAAAATGTGTTTGGGTGCATTGATTGGATTCCTC
AACGGCATGAAGTCCAATTCTCTGCTTACTATGGAGGATCATTGCCTGACACTGGAAGATATGTTCATGGACAGAGTTCT
GCGTTGTCCATTAGCAATACCACAGAAGAGTTATCCATTAGTAGTACTACAGAAGAACAGGCTGCACATAGGATATCTGA
GATCACAATTTTCAGAAATGGCGTATCCGAAATTTGTCAAAGGTTTAGTATTCCTGTGCCTTCTTTAATAAGTTAAAGTT
AATGCTTGCATATAGTAATATTTCTTATCACACTAGCTAACCATGTGTTTTGATCAATGCTGTTTCTCACGTCCACTTTG
CAATTTTGTGCTATCAGATCATATGCTAGCTGGTCATCCTATATTTTGCGTGGCTATAGATTGGGGGAAAGATTGGCACT
CCATTTGCGAGGGCTGTGCAGTCTCTTTGTAAATGAGATTAATA------CCAAACTAACCAGGTTGGTTACCTTTTCCT
GACTTCCAACTTCTTTGTGTTGATCCAAGTGCTCAAGTCCATTCAGTGAAACTTCTGTTCGTAGATGGTTGCTAAGATCT
GGTGCATGCTCACAGGTCCTTGCACCGTTTCTGGACAACATTACAAGGCTCTTCTGAAGATATAGGGTGGTTGCAAAGAA
CTCAAATGTCGCTTTATTCAGTTGATGGCACATCTCGCTTTCAGGAGCTTTTGCATGATGTCAGGTGAACTGTTTTCCCT
GCCTAGTGAAGTGTCAGTTAATAAGGAAATGGCATAGTGTTTAGTAGGAGTATTATTCAGTTATTCTTTTGCATTGCGTT
GTGTTTTTTCAGAAATGGCATGCATTACCTGCCTGATACACTGGTTTACTTGCTCATCCCTGGTGAGACATCTTTCTCAG
TTTTCACAGATAACCTTATTATGTCGTCGTAGCTTGATGGTGACTCGCAGCGTTCCTCTATGCAGGCCTTTTTAGCAACC
ACAGTCCACTTTACTTTCTCAACACTAAAAGATTCTTTTCAAGGATGGGGCTTACTTGCCATATTGCAAAGATTCATAGT
GAGGTAATTCAGCTCAACAGGGTGGCATACAAGATCTTTCTAGTTTGTCGACCTATATTTGTTTCGTGTTGTGCATGTGC
CGTAAACCAAGGAATGTCCGTCTCTTTGATTCTCATATCTTCCTCGTATTTTCTGCAGTGTATACTTTACAAGTTTGTGT
TTCGTTCTGTCACCCCCTGTAGGTCTGCACTTACCTTCCATTTTGTTCAGGCATCAGTGGAGAAAAAT----GCACGGGA
ACTGAAACTATACATCGAGGAGCTCTACTGGGGATCTGGCAAACAGGTTTTGCTCCTCGGACATAGCAAGGGCGGAGTCG
ATGTGGCTGCCGCACTCTCGTTGTACTGGTCCGAGCTCAAGGGCAAGGTTGCCGGTCTGGCACTGGTTCAGAGCCCGTAT
GGAGGCACCCCAGTGGCTTCCGACATCCTTCGAGAAGGCCAGATCGCTGACAGGGAGACGAGGAGGATCATGGAACTGAT
AGTGT-----GCAAACTTATCAAGGTC------TGTCTGTGTTCCCTTCATTTCATTACA----------TTTCATATCA
TGCATATTTCCTAACAAGTGGACGAACGCAGGGCGACATGAGAGCTCTGGAGGATCTTACGTACGACAAGAGAAAGGACT
TCATTTCCAGGCACAGGCTCCCGGTGGACGAGCTGCCGATCATCTCCTTCCACACGGAGGCCAGCACTGCCCCGACGGTG
CTCGCGACGCTGACCCGCATCGCCCAGGCCGAGCTCC-----TCCCGCTGCTCGCGGTGGCACCCCTGCCACGCTTCCTG
TCCGAGTAT----GCAGAGTCATTGCTCGCTTCTCTGAAGCTGCCCGTGGTGATGCCGGTGTCGGCCGCGATGGCGGTCA
CCGCGCTCCACCTGCGGCTGCGGTACGGGGAGAGCAGCGACGGCCTAGTGACGCGGTGCGACGCTGAGGTGCCGGGGTCC
GTGGTGGTGCGGCCCGAGCGGAGGCTGGACCACGCGTGGCTGGTGTTCTCGACACGGAGCAGGCGCCGGGCCGAGGCCGA
CGCCACCCAGGTGTGCGAGGCCCTGCTGGCCATGCTCGTCGAGATCGGCGGCAAGAGACGCCGCTGCCTCATCGAGGAGA
TCGTTACTTGAATTATCATTTCTCTCTCTGCTTGTTTGTTGAGCTAGAACTTTCGATAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>chr1B_878
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------TGTCAATG--ACATGCCCCCTCCTCTGCTGGTCC--GCTGACTTGCTGATATGATCCTGTTTTCTAGGCCTAA
AACGAATCAGCAAGAGTG--ATGCTCGCCATTATTTACCATCTGGAACTCAAATGGAGGACTATTTTGAGCGCATCGTAA
ACCTTGCTTGGCAGTTACGACAACACTTGACACAATTCATAGGTACCAAGCTGAGCATACAATGTTTTGATCGATTTAAA
TCATCAGGGGGAAACAGACTTGCTGATAGTCCAGTACACATTGCTGCCTTGTTTCTTTGTTGATTCTGAATCACCGTTTT
GTCAGTTATCTTTTCCTTCTCTGGAGCAAACTTATTCTGGCATATGATTTTGTTTCTTAGATACTTAGATACTA------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------GATA
CTAGCAAGAATGTGTTTCATCCACTCTAGAAGAAATCTGATCAAGATGGGAGTTTTCTGTACATTGTTGTTTCTGTTGAG
TTTTTTTCCTTTATTTTTATGTGCTGGTATTTT-TTTTTCTTCATAGAAAATGTGTTTGGGTGCATTGATTGGATTCCTC
AATGTCATGAAGTCCAATTCTCTGCTTACTATGGAGGATCATTGCCTGACACTGAAAGATATGTTCATGGACAGAGTTCT
GCGTTGTCCATTAGCAATACTACAGAAGAGTTATCCATTAGTAGTACTACAGAAGAACAGACTGCACATAGGATATCTGA
GATCACAATTTTCAGAAATGGCGTATCCGAAATTTGTCAAAGGTT-AGTATTCCTGTGCCTTCTTTAATCAGATAAAGTT
AATGCTTGCAGATAGTAATATTTCTTATCACACTAGCTAACCATGTGTTTTG----ATGTTGTTTCTCGCGTCCACTTTG
TAACTTCGTGCTATCAGATCATATGCTAGCTGGTCATCCTATATTTTGCGTGGCTACAGATTGGGACAAAGATTGGCACT
CCATTTGCGAGGGCTGTGCAGTCTTTTTGTAAATGAGATTAATA------CCAACCTAACCAGGTTGGTTACCGTCTTCT
GACTTCCAACTTCTTTGTGTTGATCCAAGTGCTCAAGTCCATTCAGTGAAACTTCTGTTCGCAGATGGTTGCTAAGATCT
GCTGCATGCTCACAGGTCCTTGCATCGTTTCTGGACAACATTACAGGGCTCTTCTGAAGATATAGGGTGGTTGCAAAGAA
CTCAAACGTCGCTTTATACAGTTGATGGCACATCTCGCTTTCAGGAGCTTTTGCATGATGTCAGGTGAACTGTTTTCCCT
GCCTAGTGAAGTGTCAGTTAATAAGGAAATGGCATAGTATTTAGTAGGAGTATTACTCAGTTATTCTTTTGCATTGTGTT
TA-TTTTTTCAGAAATGGCATGCATTCCCTGCCTGATACACTGGTTTACTTGCTCATCCCTGGTGAGTCATCTTTCTCAG
TTTTCACAGATAACCTTATTATGTCGTCGTAGCTTGATGGTGACTCACAGCGTTCCTCTATGCAGGCCTTTTTAGCAACC
ACAGTCCACTTTACTTTCTCAACACTAAAAGATTCTTTTCAAAGATGGGGCTTACTTGCCATATTGCAAAGATTCATAGT
GAGGTAATTCAGCTCAATAGGGTGGCATACAAGATCTTTCTAGTTTGTCGACCTATATTTGTTTCGTGTTGTGCATGTGC
CGTAAACCAAGGAATGTCCGTCTCTTTGTTTCTCGTATCTTCCTCGTATTTTCTGCAGTGTATGCTTTACAAGTTCGTGT
TTCTTTCTGCCGCCCCCTGTAGGTCTGTACTTACCTTCCATTTTGTTCAGGCATCAGTGGAGAAAAAT----GCACGGGA
ACTGAAACTATACATCGAGGAGCTCTACTGGGGATCTGGCAAACAGGTTTTGCTCCTGGGACATAGCAAGGGCGGAGTCG
ATGCGGCTGCCGCACTCTCATTGTACTGGTCCGAGCTTAAGGGCAAGGTCGCTGGTCTGGCACTGGTTCAGAGCCCGTAT
GGCGGCACCCCAGTGGCTTCCGACATCCTTCGAGAAGGCCAGATCGCTGACAGGGAGACGCGGAGGATCATGGAACTGAT
AGTGT-----GCAAACTAATCAAGGTCGTTCACTGTCTTTGTTCATACCTCAACTAAAAAACGGAGTTGCTTTCATATCA
TGCATGTTCTCTAACAAGTGGACTGCCGCAGGGCGACATGAGAGCTTTGGAGGACCTCACATACGACAGGAGGAAGGACT
TCATTTCCAGGCACAGGCTCCCAGTGGACGAGCTGCCGATCGTCTCCTTCCACACCGAGGCCAGCACCGCCCCAACGGTG
CTCGCGACGCTGACCCGCATCGCCCAGGCTGAGCTCC-----TCCCGCTACTCGCGGTGGCACCCCTGCCGCGATTCCTG
TCCGAGTAT----GCAGAGTCATTGCTCGCTTCTCTGAAGCTGCCCGTGGTGATGCCGGTGTCGGCCGCAATGGCGGCCA
CCGCGCTCCACCTGCGGCTGCGGTATGGGGAGAGCAGCGACGGCCTGGTGACGCGGCGCGATGCCGAGGTGCCGGGGTCC
GTGGTGGTCAGGCCTGAGCGGAGGCTGGACCACGCGTGGCTGGTGTTCTCGACGCTGAGCAGGCGCCGCGCCGAGGCCGA
CGCCACCCAGGTGTGCGAGGCCCTGCTGGCCATGCTCGTCGAGATCGGCGGCAAGAGACGTCGCTGCCTCATCGAGGAGA
TCGTTACATGAATTATC--TTCTCTCTCTGCTTGTTTGTTGAGCTAGAACTTTCTATAT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>chr1B_1781
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------------------GGCTTCAGATTGGGACAAAGATTGGCACT
CCAT-----------GTGCAGTCTCTCTGTAAATGAGATTAATAGTAGTACCAAACTAACCATGTTGGTTACCGTCTTCT
GGCTTCCAACTTGTATGTGTTGATCCAAGTGCTCAAGTCCATTCAGTA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------ACAAGTTTGTGT
TTCTTTCTGTCGACCCTTGTAGTC-----------------------CAGGCATCGGTTGAAAAAACCGCACGCACGGGA
ACTGAAACTATACATCGAGGAGCTCTACTGGGGATCTGGCAAACAGGTGTTGCTCCTGGGGCATAGCAAGGGCGGAGTCG
ATGCGGCTGCTGCGCTCTCGTTGTACTGGTCCGAGCTCAAGGGCAAGGTCGCTGACCTGGCATTGGTTCAGAGTCCATAC
GGTGGCAC--------CTTCCGACATCCTTCGAGAAGGCCAGATTGCTGACAGGGAGACGAGGAGGATCATGGAACTGAT
AGTGTGCAATGCAAACTAATCAAGGTCATTCACTGTCTTTGTTCATACCTTAACTAAACTT--GAGTTGCTTTCATATCA
TGCATGTTCTCTGAACCAG-------------------------------------------------------------
--------------------------------------------------------------------------------
----------TGACCCGCATCGCGCAGGCCGAGCTCCGATCCTCCCGCTACTACCGGTGGCACCCCTGCCGCGCTTCCTG
GGACTCCGAGTACGCAGTGTCATTGCTCGCTTCTCTGAAGCTGCCCGTGGTTAT--------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
-----S--S-------------SS--SSSSSS-S----------------S---------------S----------S--
-SSS-------S------SS--------------------------------------S------S--------------
S-----S--------SS------------------S---------S---S-----------------------------S
---------------------------S-----------------------------------------------S----
----------------S------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------S------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S-----------------------------S----------S-----------------------------------
-------S------------------------------------------------------S-----------------
--------------------------------------------------------------------------------
------------------S---------------------------S-------S-------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S--------------------------------------------------S------------------
---------------------------S----------------------------------------------------
--------------------------------------------------------------------------------
------------------S--------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
------------------S---------S--------------------S-S----------------------------
---S--------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S-----------------------------------------------S--------------------
----------------------------------------------------------------------------S---
---------------------------------------------------------------S----------------
---------S---------------------------------------------S------------------------
-----------------------------------------------------S--------------------------
------------------------------------------------------------------S-------------
-------------------------------S-----S--S-----------S-----------------S--S------
--------------------------------S---------------------------S----S--------------
S-------------------------------------------------------------------------------
---------------------S-------------------------------------SSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_859
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAAGACGCCTTGCCTGATGA---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_2709
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CTGTGCATGTGC
CGTAAACC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>forward_1933
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------CCACTTTG
CAACTTTGTGCTG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
>reverse_3939
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------AGGATGGTGATACCGGCAAC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------
