>input_sequence_31183
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--------------------------------------------------ATGGAGGTCGGGGGGCAGGCGATGATGGAG
CCCCAGGGAGTGGAACTCGAGGATGACAGCATCAATTTCTGGGCCTCCCTCGGCGTGAGCACCCATGTCCATGGCGTCGA
CCAGATGGCGCTCCACAATGTGCACATTCTTGACCACCAAGGACAGTCGCTGCCACCGGCGGTGGTCTCACAGCCAGAGT
CTGTCTGTAAGGAGTTGTTCCCTGTTGAAGCCGACCCCTGCCTTGAGCCTCGGGTGGGGATGGAATTCGAGTCGGGCGAG
GCTGCCAAGACCTTCTATATTGCTTATGCTGGCCGTGTTGGGTTTTCGGTCCGTATTGCTCGGTCCCGTAAGTCCAAGTG
CAGTGAGTCCATCATCATGCTAAGGTTTGTCTGCTCAAAGGAAGGGTTCAGCAAGGAGAAGCGTGTTGTTGCAGGGAAGA
AGACAAGGAAGAGGCTAGCCTCCATCAGGGAAGGCTGCAATGCCATGCTTGAGGTTCTCCGCAGAGGCGACAACAAGTGG
GTTGCCACCAAGCTTGTCAAGGAGCATAACCATGAGGTTGGGATGCCCAGCACAGTGCACTATATAGCCACTGAGAGCGA
TACTATGGTTGACCCATACATTGACATGGAGTTTGAATCCCTTGAATCTGCCAAGACATTCTACTACTCGTATGCTATCC
GTGCAGGATTTGAAGTTCGCGTGCGCCAGTCTCGGAAATCACAAGATGAGTCACTCAAGATGCTGAAGCTTGTGTGCTCA
AGGCACCGCTACCATTCAGGACGGGAGAACAATGGAGACGATACCAAGAGACATCCCTCCAGAGACGGTTGTAATGCATT
GTTTGAGATAATTCGGAAGGACAAAGGTGTCTGGAGGGTCTCCAAACTCATCCTAGAGCACACTCATGAGCTGAACCCTG
CACCAGCAAGCAGCGTTTGTTGTGTCCGCTCACAAGGTGAGATACTTGTCATTGCAAAGAACTTTGCTGACACAAGGAAT
CTTCTATTGAATGGCCAAGATTCTCAGCCTCGTAGAGAGATCCGGTATAATGATCTGGGGCCAGAGGATGCTCAAAGCCT
ACTTGAATATCTTAAAAAGGTACAGGCTGAGGACCCTGCATTTTTCTATGCTGTGCAGCTTGACAAGCATGAGGACACGG
TCAATATCTTCTGGGCTGACGCGAGTGCTAGGATGGCTTATTACCATTTTGGTGACGCTGTTAGGTTTGAGACAGGATAC
AGGAGCAACAAGGAACATATACCCATTGTCATATTTTCAGGTGTCAATCATCATGTGCAGCCTGTTATTTTTGGCTGTGC
ACTACTTGTTGATGAATCTGAAGAATCATTTGTATGGTTATTTGAAAAATGGCTTGAAGCAATGCATGTGAGGCCTCCTG
TTTCTTTTGTAACAGAGCTGAACCAAGAGATGGCAGCTGCAGCTGCCAAGGTATTACCTGACACCTGTCATATATTCTGT
GAAAATCATATATTAGGCACTGTCAAGGAGGAGTTGCATAGTATTTATCCAGGACTAGACCATTTCATAACTGATCTGAG
AAATTGCATTGATGGATGCAGAATAGAAGAATCATTTGAATCATCTTGGGAATCAGTTCTCATGCAACATGGCTTTAGAA
ATAATGAACATTTACAGTCTCTTTATGATATTCGCAAACGATGGGCCCCTGCATACACAAAGCAATCATTTCATGCCAGA
AACCTGCTTGCACAAAGCTGTGAAAATCTTGAAAAGATTATAGATACATACTTCTCATCCAAGACCCAATTACAGGTGGC
TGTGCAGCAACTTGAACAAGCTATTTGTAATTTCCATGCAAAAGAAGCCCAGGCGGATTATCTGACAATGTTTCAACTAC
CAGCACTGAGGACTGCTTCACCAGTGGAGAAACAAGCAGCTTTAGTATTTTCTAGGAAAGTGTTTGATATATTTCAGGAG
CAATTTGCCGAGTCCTTTGGGTACCATGCAGAGAGGCTCGAGGATAGCATGCTACACAAGTACCGCCTGACAGTAGATGA
TGGTGATGAGGAGGCACATATCGTCTCTTTCAGTCCAGATCAAAGTACAGTGTGCTGTAGTTGTTGCTTATTCGAGAGCT
GTGGAATCTTGTGCAGGCATGCTCTTCGAGTTTTCATCATCGAAGGAGTGCGTTTCCTTCCAAAGGCCTATGTCTTGAAA
CGCTGGACAAAGCATGCAAAAAGTACCGTCACCTTGGATAACTACATTGAACTAAGGGGATACTGTGAGGATCCTTCAAC
TTCAAGGTACAATGATCTTTGCTATGATGCAGTCAAATGTGCAAAAGAGGGCTCAACATCCACCGAGCGCTATAAAATTG
CTAAAGAGGCACTGTGCAAGGCTCTTGATGAAATAATGCCTACAAGGAATATTAGAGAGCAAAATTCACAAAACTGTACA
ACATCATTAAGAAGTCCAGTCAAGAAACTTGGGACATCTAAAGGTACCTCTGGCAAGAGCATAAAGAGGCCAGCATTCAA
AAATTCCCTCATGGAGAGCAATGGCAGTAGATGA----------------------------------------------
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>chr5D_1_TraesCS5D01G204400
TGTATGTGTTGATAAATCATGATTTCCCCCCTTATTTCAGTGTGTGTAGGCTAACAAAATTACCAATTGAAATTGACGAA
ATTGGTTTGTTCATCAC-AAAAGGATGCACACACAAGTTGCCGCTAGGCATTGCTAATTTCAGTTTCAAAATGTTATGCT
TACGCTAGGCATGGGTATGTTAAGATAGCATGAAATTGATGCTTTGTGTATCCATGCTTCTGAA-TTTATTGAGTTTGTT
GTTCACTCCAGATAGTTTGCTGCAATAGAATATGATTCTACCTTTTTCTGTACTTGTTACACTGTAAGACCATATTTTGT
ATTTAAATACTCTCATCATGCTTCCTACATTTCATACGTGTATATATAT---TGCATATAATGCAAGTTCACACCTTTCA
GATTTCTTTGTTTCCATTGGTACAGTCAGGTTGCCAAATTAGTAGTTGCTACAAACCATTTTATTTCTTGCATAAG-TTC
TATAGT-GTGTTTATTCCATGCTTGGAAAGCTAACTATATATTACTTCTACTGTGTAGGTAGTTTGCTAGTTTGCTTTCG
TGGTTCCTGCTTCCGTAGTCTGGTCCCTAGCGGTTCCCATGCTAGTTTGCTAGTCTGATCCCTAGCGGTTCCCATGCAGC
CGAGCAACCTGAAGGTACCGCCTTTCCTCTTTACTCACTGAATCAGCCTCCTTTCCCTGCAGTTCTGTTGGAATCCAAGG
TCTCACTGGGTCAAATTACTAGGGTTCTTGCTCTCGATTTCCGCAACCTGAGTTACTTGCTTACAGTTTCTCGGTGAAGT
TATTGAAGCATCGGGTTTGTTGCTTCCCCACAGAAGGTGCGGAGGCATCGTAGAGCCAGAGGGAGAGAGACCTGGAGTAG
TTTTCTGGTTTTTGGATTGGGCATCAGAGAGTAGCAGCTGT---TGTTGGTTGGTTTCTTGGTTCTTGATTTGCTTCTGT
GGTGGAGGGAAGGGCTAAGAAGACGAGGGAGGGTATTGAGGGCAAGGGTAATGGAGGTCGGGGGGCAGGCGATGATGGAG
CCCCAGGGAGTGGAACTCGAGGATGACAGCATCAATTTCTGGGCCTCCCTCGGCGTGAGCACCCATGTCCATGGCGTCGA
CCAGATGGCGCTCCACAATGTGCACATTCTTGACCACCAAGGACAGTCGCTGCCACCGGCGGTGGTCTCACAGCCAGAGT
CTGTCTGTAAGGAGTTGTTCCCTGTTGAAGCCGACCCCTGCCTTGAGCCTCGGGTGGGGATGGAATTCGAGTCGGGCGAG
GCTGCCAAGACCTTCTATATTGCTTATGCTGGCCGTGTTGGGTTTTCGGTCCGTATTGCTCGGTCCCGTAAGTCCAAGTG
CAGTGAGTCCATCATCATGCTAAGGTTTGTCTGCTCAAAGGAAGGGTTCAGCAAGGAGAAGCGTGTTGTTGCAGGGAAGA
AGACAAGGAAGAGGCTAGCCTCCATCAGGGAAGGCTGCAATGCCATGCTTGAGGTTCTCCGCAGAGGCGACAACAAGTGG
GTTGCCACCAAGCTTGTCAAGGAGCATAACCATGAGGTTGGGATGCCCAGCACAGTGCACTATATAGCCACTGAGAGCGA
TACTATGGTTGACCCATACATTGACATGGAGTTTGAATCCCTTGAATCTGCCAAGACATTCTACTACTCGTATGCTATCC
GTGCAGGATTTGAAGTTCGCGTGCGCCAGTCTCGGAAATCACAAGATGAGTCACTCAAGATGCTGAAGCTTGTGTGCTCA
AGGCACCGCTACCATTCAGGACGGGAGAACAATGGAGACGATACCAAGAGACATCCCTCCAGAGACGGTTGTAATGCATT
GTTTGAGATAATTCGGAAGGACAAAGGTGTCTGGAGGGTCTCCAAACTCATCCTAGAGCACACTCATGAGCTGAACCCTG
CACCAGCAAGCAGCGTTTGTTGTGTCCGCTCACAAGGTGAGATACTTGTCATTGCAAAGAACTTTGCTGACACAAGGAAT
CTTCTATTGAATGGCCAAGATTCTCAGCCTCGTAGAGAGATCCGGTATAATGATCTGGGGCCAGAGGATGCTCAAAGCCT
ACTTGAATATCTTAAAAAGGTACAGGCTGAGGACCCTGCATTTTTCTATGCTGTGCAGCTTGACAAGCATGAGGACACGG
TCAATATCTTCTGGGCTGACGCGAGTGCTAGGATGGCTTATTACCATTTTGGTGACGCTGTTAGGTTTGAGACAGGATAC
AGGAGCAACAAGGAACATATACCCATTGTCATATTTTCAGGTGTCAATCATCATGTGCAGCCTGTTATTTTTGGCTGTGC
ACTACTTGTTGATGAATCTGAAGAATCATTTGTATGGTTATTTGAAAAATGGCTTGAAGCAATGCATGTGAGGCCTCCTG
TTTCTTTTGTAACAGAGCTGAACCAAGAGATGGCAGCTGCAGCTGCCAAGGTATTACCTGACACCTGTCATATATTCTGT
GAAAATCATATATTAGGCACTGTCAAGGAGGAGTTGCATAGTATTTATCCAGGACTAGACCATTTCATAACTGATCTGAG
AAATTGCATTGATGGATGCAGAATAGAAGAATCATTTGAATCATCTTGGGAATCAGTTCTCATGCAACATGGCTTTAGAA
ATAATGAACATTTACAGTCTCTTTATGATATTCGCAAACGATGGGCCCCTGCATACACAAAGCAATCATTTCATGCCAGA
AACCTGCTTGCACAAAGCTGTGAAAATCTTGAAAAGATTATAGATACATACTTCTCATCCAAGACCCAATTACAGGTGGC
TGTGCAGCAACTTGAACAAGCTATTTGTAATTTCCATGCAAAAGAAGCCCAGGCGGATTATCTGACAATGTTTCAACTAC
CAGCACTGAGGACTGCTTCACCAGTGGAGAAACAAGCAGCTTTAGTATTTTCTAGGAAAGTGTTTGATATATTTCAGGAG
CAATTTGCCGAGTCCTTTGGGTACCATGCAGAGAGGCTCGAGGATAGCATGCTACACAAGTACCGCCTGACAGTAGATGA
TGGTGATGAGGAGGCACATATCGTCTCTTTCAGTCCAGATCAAAGTACAGTGTGCTGTAGTTGTTGCTTATTCGAGAGCT
GTGGAATCTTGTGCAGGCATGCTCTTCGAGTTTTCATCATCGAAGGAGTGCGTTTCCTTCCAAAGGCCTATGTCTTGAAA
CGCTGGACAAAGCATGCAAAAAGTACCGTCACCTTGGATAACTACATTGAACTAAGGGGATACTGTGAGGATCCTTCAAC
TTCAAGGTACAATGATCTTTGCTATGATGCAGTCAAATGTGCAAAAGAGGGCTCAACATCCACCGAGCGCTATAAAATTG
CTAAAGAGGCACTGTGCAAGGCTCTTGATGAAATAATGCCTACAAGGAATATTAGAGAGCAAAATTCACAAAACTGTACA
ACATCATTAAGAAGTCCAGTCAAGAAACTTGGGACATCTAAAGGTACCTCTGGCAAGAGCATAAAGAGGCCAGCATTCAA
AAATTCCCTCATGGAGAGCAATGGCAGTAGATGACCAGATATTGTGAATTTGAACATAATGCGATTTCACCTGTTCTGAC
CTTGTATAGTTGTAGTATCATTCAATCTAGTACTAGTCTCTTACGCTGTGGCTGGTTACGGCTTTTCCCTGTCAGCGCAT
CTAGTAACAGCAAGGGTGCTAATGAATCGTTTGAGACATTACTCTTCAAAATGAATGTAGGAACATATGCCCTTCGTGGG
GATTTTTCATGAATGGCACTGTAGGAAGGGCAATTTTGTTACATGGTAGTACATCCATAATTTTGTATGTACCATTGCGT
G-ACCAATATAGCATAGCCTTATGTTAGTTGGGATTCAC-TTTTTATACTAAAAGACTGTTTTAAATTGTGGTGGTTGTG
GCCTTATGCGTGGAAGTGACAGTTGTGCTACAAAAGCTAACTGCCTATTCGAGTACTTATGCAGTTAA-GCACATGTACT
GCTTAGTATACGCACTTGTATGTTTGAGTTCTGTGCTTCTCTTTGATCGTTTGTATGAAATGCAGTATGTTCTCATGGAC
ATGTATGTCGAACATTTAGGTATTTATATCTTTTACATTGTTATAAAGGACGCAAGTTAATATGATAG-GAGCCTCTCAC
TACATTTTTTTTACTATGGATTCTCGTCTTTTAGGCCTTCTTTGGTTTATAGGATAGGAAAATTGTAGGAATAGGAAAGT
CATAGGAAATGAGGCGACATGTATCTCAAATCCTATGAGTAGGAATAGGAAAGGAGATGCCCTTTGATTCACATCATAGA
TTTTTTCCATCGAGTGTAGGCTAATGTTTATTTTCCTATGGAATGTGAAGGATAGGAAGAATTCCTCCATAGAAATAGGA
TTCCATTTCTACAAACCAAAGGGCTCTAAAAGAATTGTTTTCTATAAAAATCTTATTCTATGAAATTCCTACAAGATTCC
TCTAAACCAAAGAAGGCCTGTATTTTTGTAGGCACAGGAATTAGCAGTCTTAGGATAAGTGGATTTTTAACTTATTCT
>chr5A_1
TGTATATGTTGATAAATCATGATTTCCCCCCTTATTTCAGTGTGTGTAGGCTAACAAAATTACCAATTGAAATTGACAAA
ATTGGTTTGTTCATCACAAAAAGGATGCACACACAAGTTGCCGCTAGGCATTGCTAATTTCAGTTTCAAAATGTTATGCT
TACGCTAGGCATGGGTATGTTAAGATAGCATGAAATTGATGTTTTGTGTATCCATGCTTCTGAA-TTTATTGAGTTTGTT
GTTCACTGCAGATAGTTTGCTGCAATAGAATATGCTTCTACTTTTTTCTGTACTTGTTACACTGTAAGACCATATTTTGT
ATTTAAATACTCTCATCATGCTTCCTACATTTCATACGTGTATATATATATATGCATATAATGCAAGTTCACACCTTTCA
GATTTCTTTGTTTCCATTGGTACAGTCAGGTTGCCAAATTAGTAGTTGCTACAGACCATTTTATTTCTTGCATAAGCTTC
TATAGT-GTGTTTATTCCATGCTTGGAAAGCTAACTATATATTACTTCTACTGTGTAGGTAGTTTGCTAGTTTGCTTTCA
TGGTTCCTGCTTCCGTAGTCTGATCCCTAGCGGTTCCCATGCTAGTTTGCTAGTCTGATCCCTAGCGGTTCCCATGCAGC
CGAGCAACCTGAAGGTACCGCCTTTCCTCTTTACTCACTGAATCAGCCTCCTTTCCCTGCAGTTCTGTTGGAAACCAAGG
TCTCACTGGGTCAAATTACTAGGGTTCTTGCTCTCGATTGGTGCAACCGGAGTTACTTGCTTACTGTTTCTCGGTGAAGT
TATTGAAGCATCGGGTTTGTTGCTTCCCCACAGAAGGTGCGGAGGCATCGTAGAGCCAGAGGGAGAGAGACCTGGAGTAG
TTTTCTGGTTTTTGGATTGGGCATCAGAGAGTGGCAGCTGT---T---GGTTGGTTTCTTGGTTCTTGATTTGCTTCTGT
GGTGGAGGGAAGGGCTAAGAATACAAGGGAGGGTATTGAGGGCAAGGGTAATGGAGGTCGGGGGGTAGGCGATGATGGAG
CCCCAGGGAGTGGAACTCGAGGATGACAGCATCGATTTCTGGGCCTCCCTCGGCGTGAGCACCCATGTCCATGGCGTCGA
CCAGATGGCGCTCCACAGTGTGCACATTCTTGACCACCAAGGACAATCGCTGCCACCGGCAGTGGTCTCACACCCAGAGT
CTGTCTGTAAGGAGTTGTTCCCTGTTGAAGCCGACCCCTGCCTTGAGCCCCGGGTGGGGATGGAATTCGAGTCGGGCGAG
GCTGCCAAGACCTTCTATATTGCTTATGCTGGCCGTGTTGGGTTTTCGGTCCGCATCGCTCGGTCCCGTAAGTCCAAGTG
CAGTGAGTCCATCATCATGCTAAGGTTTGTTTGCTCAAAGGAAGGGTTCAGCAAGGAGAAGCGTGTTGTTGAAGGGAAGA
AGACAAGGAAGAGGCTAGCCTCCATCAGGGAAGGCTGCAATGCCATGCTTGAGGTTCTCCGCAGAGGCGACAACAAGTGG
GTTGCCACCAAGCTTGTTAAGGAGCATAACCATGAGGTTGGGATGCCCAGCACAGTGCACTATATAGCCACTGAGAGCGA
TACTATGGTTGACCCATACATTGACATGGAGTTTGAATCCCTTGAGTCTGCCAAGACATTCTACTACTCGTATGCTATCC
GTGCAGGATTTGAAGTTCGCGTGCGCCAGTCTCGGAAATCACAAGATGAGTCACTCAAGATGCTGAAGCTTGTGTGCTCA
AGGCACCGCTACCATTCAGGACGGGAGAACAATGGAGACGATACCAAGAGAGATCCCTCCAGAGACGGTTGTAATGCACT
GTTTGAGATAATTCGGAAGGACAAAGGTGTCTGGAGGGTCTCCAAACTCATCCTAGAGCACAGTCATGAGCTGAACCCTG
CACCAGCAAGCAGCGTTTGTTGTGTCCGCTCACAAGGTGAGGTACTTGTCATTGCAAAGAACTTTGCTGACACACGGAAT
CTTCTATTGAATGGCCAAGATTCTCAGCCTCATAGAGAGATCCGGTACAATGATCTAGGGCCAGAGGATGCTCAAAGCCT
ACTTGAATATCTTAAAAAGGTACAGGCTGAGGACCCTGCATTTTTCTATGCTGTGCAGCTTGACAAGCATGAGGACACGG
TCAATATCTTCTGGGCTGATGCGAGCGCTAGGATGGCTTATTACCATTTTGGTGACGCTGTTAGGTTTGAGACAGCATAC
AGGAGCAACAAGGAGCATATACCCATTGTCATATTTTCAGGTGTCAATCATCATGTGCAGCCTGTTATTTTTGGCTGTGC
ACTACTTGTTGATGAATCTGAAGAATCATTTGTATGGTTATTTGAAAAATGGCTTGAAGCAATGCATGTGAGGCCTCCTG
TTTCTTTCGTAACAGAGCTGAACCAAGAGATGGCAGCTGCAGCTGCCAAGGTATTACCTGACACCTGTCATATTTTCTGT
GAAAAGCATATATTAGGTACTGTCAAGGAGGAGTTGCATAGTATTTATCCAGGACTAGACCATTTCATAACTGATCTGAG
AAAGTGCATTGATGGATGCAGAATAGAAGAATCATTTGAATCATGTTGGGAATCAGTTCTCATAAAACATGGCTTTAGAA
ATAATGAACATTTACAGTCTCTTTATGATATTCGTGAACGATGGGCCCCTGCATACACAAAGCAATCATTTCATGCCAGA
AACCTGCTTGCACAAAGCTGTCAAAATCTTGAAAAGATTATAGATACATACTTCTCGTCCAAGACCCAGTTAGTGGTGGC
TGTGCAGCAACTTGAACAAGCTATTTGTAATTTCCATGCGAAAGAAGCCCAGGTGGATTATCTGACAATGTTTCAACCAC
CAGCACTGAGGACTGCTTCACCAGTGGAGAAACAAGCAGGTTTAGTATTTTCTAGGAAAGTGTTTGATATATTTCAGGAA
CAATTTGCGGAGTCCTTTGGGTACCATGCAGAGAGGCTCGAGGATAGGATGCTACACAAGTACCGCCTGACAGTAGATGA
TGGTGACGAGGAGGCACATATCGTCTCTTTCAGTCCAGATCAAAGTACAGTGTGCTGTAGTTGTTGCTTATTCGAGAGCT
GTGGAATCTTGTGCAGGCATGCTCTTCGAGTTTTCATCATCGAAGGAGTGCGTTTCCTTCCAAAGGCCTATGTCTTGAAA
CGCTGGACAAAGCATGCAAAAAGTACTGTCACCCTGGATAACTACATTGAACTAAGGGGATACTGTGAGGACCCTTCGAC
TTCAAGGTACAATGATCTTTGCTATGATGCAAACAAATGTGCAAAAGAGGGCTCAACATCCACTGAGCGCTATAAAATTG
CTAAAGAGGCACTGTGCAAGGCTCTTGATGAAATAATGCCTACAAGGAATATTAGAGAGCAAAATTCACAAAACTGTACA
ACATCATTAAGAAGTCCAGTCAAGAAACTTGGGACATCTAAAGGTACCTCTGGCAAGAGCATAAAGAGGCCAGCATTCAA
AAATTCCCTTGTGGAGAGCAATGGCAGTAGATGACCAGATATTGTGAATTTGAACATAATGCGATTTCACCTGTTCTGAC
CTTGTATAGTTGTAGTATCATTCAATCTAGTACTAGTCTCTTATGCTGTGGCTGGCCATGGCTTTTTCCTGT--------
-------CAGCAAGGGTGCTAATGAATCGTTTGAGACATTACTGTTCAAAAGGAATGTAGGAACATATGCCCTTCGTGGG
AATTTTCTATGAATGGCACTGTAGGAAGGGCAATTTTGTTACATGGTAGTACATCCATAATTTTGTACGTACCATTGCGT
G-ACCAACGTAGCATAGCCTTATGTTAGTTGGGATTTAC-TTTTTATACCGAAAGACTGT--TAAATTGCGGTTAGC---
-----ATGTGTAGAAGTGACAGTTGTGCTACGAAAGCTAACTGCAG--TCGAGTACTTATGCAGTTAA-GCACCTGTACT
GCTT----------------------------------------------------------------------------
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>chr5B_1
TGTATGTGTTGAT--ATTATGATTGCCCCCCTTCTTTCAGTGTGTGTAGGCTAGCAAAAGTACCAATTTCAATTGATGAA
ATTAGTTTGTA-ATCAC-AAAATGATGCACACACATGTTGCCGCTAGGCATTGCTAACTTCAGTTTCAAAATGTTATGCT
TACACTAGGCATGGGTATGTT---ATAGCATGAAACTGATGCTTTGTGTATCCATGCTTCTGAAGTTTATTGAATGTGTT
GTTCATTCCAGATAGTTTGCTGCAATGGAACATGCTTCTACTTTTTTCTGTACTTGTTACGTTTCATATGTGTGTGT---
-------------------------------------GTGTGTGTGTAT---TGCATATACTGCAAGTTCACACCTTTCA
GATTTCTTTGTTTCCAATTGTGAAGTCAGGTTGCCA----------TGCTACAAACTATTTTATTTCTTGGAGAAG-TTC
TATAGTAGTGATTATTCCATGCCTTGAAAGCTAACTACATATG-CTTCTACTGTGTAGGTAGTTTGCTAGTTTGCTTTCA
TGGTTCCTGCTTCCGTAGTCTGATCCCTAGCGGTTCCCATGCTAGTTTGCTAGTCTGATACCTAGCAGTTCCCATGCAGC
CGAGCAACCCGAAGGTACCGCGTTTCTTCTTTGCTCACTAAATCAGCCTCCTTTCCCTGCATTTCTGTTGGAATCCGACG
TCTCACTGGGTCAAATTACTAGGGTTCTTGCTCTCGATTTCCGCAACCGGAGTTACCTGCTTACAGTT-CTCGGTGAAGT
TATTGAAGCATCGGGTTTGTTGCTTCCCCACAGAAGGTGTAGTGGCATCATAGAACCAGAGGGAGAGAGACCTGGAGTTG
TTTTCTGGTTTTTGGGTTGGACATCAGAGAGTGGCAGCTGCTGCT---GGTTGGTTTCTTGGTTCTTGATTTGCTTCTGT
GGTGGAGACT--GGCTAAGAAGACGAGGGAGGGTATTGAGGGCAAGGGTAATGGAGGTTGGGGGGCAGGCGATGATGGAG
CCCCAGGGGGTGGAACTCGAGGATGACAGCATCAATTTCTGGGCCTCCCTTGGCGTGAGCACCCATGTCCATGGCGTTGA
CCAGATGGCGCTCCACAATGTGCACATTCTTGACCACCAAGGACAGTCACTGCCACCGGCGGTGGTCTCACACCCAGAGT
CTGTCTGTAAGGAGTTGTTCCCTGTTGAAGTCGACCCATGCCTTGAGCCCCGGGTGGGGATGGAATTCGAGTCGGGCGAG
GCTGCCAAGACCTTCTATATTGCTTATGCTGGCCGTGTTGGGTTTTCGGTCCGCATTGCTCGGTCCCGTAAGTCCAAGTG
CAGTGAGTCCATCATCATGCTAAGGTTTGTCTGCTCAAAGGAAGGGTTCAGCAAGGAGAAGCGTGTTGTTGCAGGGAAGA
AGACAAGGAAGAGGCTAGCCTCCATCAGGGAAGGCTGCAACGCCATGCTTGAGGTGCTTCGCAGAGGCGACAACAAGTGG
GTTGCCACCAAGCTTGTCAAGGAGCATAACCATGAGGTTGGGATGCCCAGCACAGTGCACTATATAGCCACTGAGAGCGA
TACTATGGTTGACCCATACATTGACATGGAGTTTGAATCCCTTGAGTCTGCCAAGACATTCTACTACTCGTATGCTATCC
GTGCGGGATTTGAAGTTCGCGTGCGCCAGTCTCGAAAATCACAAGATGAGTCACTCAAGATGCTAAAGCTTGTGTGCTCA
AGGCACCGTTACCATTCAGGACGGGAGAACAATGGAGACGATACCAAGAGAGATCCCTCCAGAGACGGTTGTAGTGCACT
GTTTGAGATAATTCGGAAGGACAAAGGTATCTGGAGGGTCTCCAAACTCATCCTAGAGCACACTCATGAGCTGAACCCTG
CACCAGCAAGCAGCGTTTGTTGTGTCCGCTCACAAGGTGAGATACTTGTCATTGCAAAGAACTTTGCTGACACACGAAAT
CTTCTATTGAATGGCCAAGATTCTCAGCCTCGTAGAGAGATCCGGTATAATGATCTGGGGCCAGAGGATGCTCAAAGCCT
ACTTGAATATCTTAAAAAGGTACAGGCTGAGGACCCTGCATTTTTCTATGCTGTGCAGCTTGACAAGAATGAGGACACGG
TCAATATCTTCTGGGCTGACGCGAGTGCTAGGATGGCTTATTACCATTTTGGTGACGCTGTTAAGTTTGAGACAGCATAC
AGGAGCAACAAGGAGCATATACCTATTGTCATATTTTCAGGTGTCAATCATCATGTGCAGCCTGTTATTTTTGGCTGTGC
ACTACTTGTTGAAGAATCTGAAGAATCATTTGTATGGTTATTTGAGAAATGGCTTGAAGCAATGCATGCGAGGCCTCCTG
TTTCTTTCGTAACAGAGCTGAACCAAGAGATGGCAGCTGCAGCTGCCAAGGTATTACCTGACACCTGTCATATTTTCTGT
GAAAAGCATATATTAGGCACGGTCAAGGAGGAGTTGCATAGTATTTATCCCGGACTAGACCATTTCATAACTGATCTGAG
AAAGTGCATTGATGGATGTAGAATAGAAGAATCATTTGAATCATGTTGGGAATCAGTTCTCATGAAACATGGCTTTAGAA
ATAATGAACATTTACAGTCTCTTTATGATATTCGCAAACGATGGGCCCCTGCATACACAAAGCAATCATTTCATGCCAGA
AACCTGCTTGCACAAAGCTGTGAAAATCTTGAAAAGATTATAGATACATACTTCTCGTCCAAGACCCAATTACAGGTGGC
TGTGCAGCAACTTGAACAAGCTATTTGTAATTTCCATGCGAAAGAAGCCCAGGCAGATTATCTGACAATGTTTCAACTAC
CAGCACTGAGGACTGCTTCACCAGTGGAGAAACAAGCAGGTTTAGTATTTTCTAGGAAAGTGTTTGATATATTTCAGGAG
CAATTTGCGGAGTCCTTTGGGTACCATGCAGAGAGGCTCGAGGATAGGATGCTACACAAGTACCGCCTAACAGTAGATGA
TGGGGACGAGGAGGCACATATTGTCTCTTTCAGTCCAGATCAAACTACAGTGTGCTGTAGTTGTTGCTTATTCGAGAGCT
GTGGAATCTTGTGCAGGCATGCTCTTCGAGTTTTTATCATCGAAGGAGTGCGTTTCCTTCCAAAGGCCTATGTCTTGAAA
CGCTGGACAAAGCATGCAAAAAGTACTGTCACCTTGGATAACTACATTGAACTAAGGGGATACTGTGAGGATCCTTCAAC
TTCAAGGTATAATGATCTTTGCTATGATGCAATCAAATGTGCAAAAGAGGGCTCAACATCCACTGAGCGCTATAAAATTG
CTAAAGAGGCACTATGCAAGGCTCTTGATGAAATAATGCCTACAAGGAATATTAGAGAGCAAAATTCACAAAACTGTACA
ACATCATTAAAAAGTCCAGTCAAGAAATTTGGGACAGCCAAAGGTACCTCTGGCAAGAGCATAAAGAGGCCAGCATTCAA
AAATTCCCTTGTGGAGAGCAATGGCAATAGATGACCAGATATTGTGAATTTGAACATAATT-GATTTCACCTGCTCTGAC
CTTGTATAGTTGTAGTATCATTCAATC---TAGTAGTCTCTTACGCTGTGGCTGGCCACGGCCTTTTTCCTGTCAGT--T
CTAGTAACAGCAATGGTGCTAATGAATCATTTGAGACATTACTGTTCAAAAAGAATGTAGGAACATATGCCCTTCTTGGG
AATTTTTTATGAATGGCACTGTAGGAAGGGCAATTTTGTTACATGGTAGTACATCCATAATTTTATACGTATCATTTGCA
TTACCAATGTAGCATAGCCCTATGTTAGTTGGGATTCACTTTTTTATACTAAAAGACTGT--TAAATTGCGGTTGTTGTG
TCTTTAT-TGTGGAAGTGACAGTTGTGCTACAAAAACTAACTGCCTAATCGAGTACTTATGCAGTTAAAGCACATGTACT
GCTTAGGACAGGCATTTGTATGTTTGAGTTCTGTTCTTCTTTTTGATCGTTTGTATGAAATGCAGTATGTTCTCATGGAC
ATGTGTGTTGCACATTTAGGTATCTATATCTTTTATATTGT--TAAATGACGCAAGTTAATATAACCATGAGCCTATCAC
TA------------------------------------------------------------------------------
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>SNPs
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----------------------------------S------S--------------------------------------
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-------------------------------------------------------------------------------S
----------------------S---------------------------------------------------------
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------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------S------------SSS--------------------------------
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------------------------------------------------------------------------S-------
-------------------------------------------------S------------------------------
-----------------------------------------------------S--------------------------
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---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S--------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
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---------------------------------------------------------------------------S----
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-----------------------------------------------------------------S------
-----S--------------------------------------------------------------------------
---S----------------------------------------S-------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
---------------------------------------S----------------------------------------
---------------------------------------S----------------------------------------
--------S--------------------------------------S--------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
-------------------------------S-------------------------------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------SS---------------------------------------------------------------------
-------------------------------------------------------SS---------S-----SSSSSSS-
-------------------------------------------S-------S----------------------------
S------S-----------------------------------------------------------S------------
--------S---------------------------------------------------SS-------S---S------
S-S-----S--------------------------------------S--------------------------------
------S-S-S---S-------------------S-----S---------------------------------------
----S---S-S------------S-----------S-----SS----S---------------S-SSS-------S----
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_769
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-----------------------------GCTCTCGATTTCCGCAACCT-------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_1812
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------CATCCCTCCAGAGACGGTTG---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_1334
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------GTGTTGGGTTTTCGGTCCGT--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_2840
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------AAAAGAAGCCCAGGCGGATT---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2236
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CGCTGTTAGGTTTGAGACAGG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>reverse_3929
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------CGTGGAAGTGACAGTTGTGC----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
