>input_sequence_31150
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-------------------------------ATGGCGGCCGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGG
AGTCCATGGTGGAGCAGGTTCTCATGAAGCCCCACGCCCGCTCGGACGGTTCGCTCCCCACCTGCGCTGACTCGGTCGGC
GCGGGTGACCCGATTTCGGGCCCGGCGGCGCCCAAGAAGTGGCAGCGCCTGGGCCGCAACTTCGCCGGCGCCATCGCGGC
ATTCAAGAACACGCTCAACCTGGACAACGGCGGCGTCCCCCGCGACCCCTCGCCGCGCGCCGGCGGCGAGAAGCCGCCGC
TCCTCCTCCGCGGCCTCGCGCAGCTCTACTCCCGTGGCGCCGCAGCCCAGCAGCTGCCGGAGAAGCTCGTTTCTGACCTC
CGCCGCCACTTCGATGCTCTTCCCAACAGGTGAGCGACCATCTTCGC--AAGTTCTGGAACAGACGAAATTTTGCCGCGG
CATCAAGCGGCCACATACC--------------------------------------ACT-TAAACTGCTTCC-TGTTTC
TAATTTCTATACAGTATTTACGACC--TTTTATCTGGTTTGTTAAACCAGAGGTGCTAAATCAAGCGCATA----ATTTA
TTTATTTGGATGTGCTGAATGGTTCCGTTGCTGACGGTCAGAAATCTCGGTTTTGCAGCTACGCACAGGCAGGATTTGAC
ATGAAAGATGTCCTCTTGCACGCCCGCCTTGTAGAGCAGGCGGCCGGTGAGGATCAGCCTGCACTGAGCATCGAGGAAGT
TCATGGCAGCAATGGCAGAGAAAGTGGTGCCGAGGGCACTGTATTTCAGCTCACCTTTGCCTGCAACGCCCCACTTTCAT
GGCAGTCAATGTCAGGCTCACTCGACAGCCCATTGTTCAGTTGCAAGAAGATCCAGATCTTCGAGAAGAGAGGACTGACA
CTTGGTGTCGTCCTGATAATTGTGCAATCCGGGAGCGAGGAGCTCTTCAAGAGCCGGGTCGAGGCCGCGCTAAAATCGGC
GACAAAGAAGCATCGGAAGAACAGTGGAGGCGGCGGTGGCGGTGTGAAGCTCCCCTTCGGGCTCTGCGGCTGCCAGGAAG
AAGGATCGCGCAACTTCGACGAGGAGTCCATGTTTGATCCCGAGGAAGGCCAGGATCTTGACAATGAGCCTGCTCGCAGG
CCATACCTTCCCACTCCCCTACCACAATCATCAGTCTTTGTCTCAGTAGATGAGTGGCAGACCGTCCGATCCGGGGGCGA
GGAGCTCGGCCGCTGGATTGTGAGCTCCGAGGAGATCGAATTCGTCGACTGGGTTGGCCAAAACTCGTTCAGGGGAGTCC
ACAGAGGAAGGAAGGTTTGGGTTAACAAAATGAGGGGTTGCAACATGGGCAGTGCTTACGATGTCGAGATCCGTCAGGAC
TTGCTGCAACTGATGAGCTGCGGTCAGAAGAACATCCTCCAGTTCCATGGCATCTGCTTCAACGAGAGCCATGGCCTCTG
CATAGTGACTAGGATGATGGAAGGGGGCTCGGTTCATGACATCATTATGCAGAGAAACAAGAGACTGTCGCTCCGGGACA
CGATTAGGATTGCTCTTGATGTTGCTGATGGCTTGGCGTTCATGAACGGCTACGGCATTGCGTACCGTGATCTTAACGCA
CGAAGGATCCTGCTAGACAGACAGGGAAATGCCTGCCTTGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGCGA
GGTTACTGAGTATGAGACGTCTGGGTATCGCTGGCTAGCTCCAGAGGTTAGTTTTCTTGACTTGATTTAATGTAAATAAA
CTCTTCTAGAAATGCTCTTTCTGAAAGCGAGTTTAGTCCCAGCATGCTAGAAGTTCTTTCTTTGAGCTAATTGCTCTATT
TTAACTGTAGCCATTATCTGGGATCTTCAAGTAACCCAGTAAAACAGCAACATTGACGATGAAACATGTA----TTTTTA
CTTGTCATCCTGTAGGAGTACATAGAACTCTAGGACAAACCGTGTAGAACACTGCATCATCTTGCCTTTTAATTTTATGA
GCAGAGCATAATAAAACTTCAAATACGAAATGT-GAAAGAAATACTACTTTGATCTGACCAACTTGATGCTCTTATGCAC
TAGATCAGCCTGCCAATGCCAGTTAGTAGTACTATCTTGTGTCCACCCAATGGTCAGGGAATCCATCCTTTTAACCCTGA
AAAACCAATTTTGTGCTCCTATTGTACTCCTTATCATCCTTTT-----------------AAGCTTATGTTAT-CTGAAC
CTATCCTTACTGAGAGGTGGTTACTTAAATGCTTTGTTTACAGATCATTGCTGGAGATCCAGAAAGCGTATCGGAGACCT
GCATGAGCAACGTCTACAGCTACGGCATGGTTCTGTGGGAGATGGTGACCGGCGAGGAGGCCTACTCGACGTACTCGCCG
GTGCAGGCGGCGGTGGGGATCGCGGCGTGCGGGCTGAGGCCGGAGATACCGAGGGACTGCCCGCCGTTCCTGAGGTCGCT
GATGAGCCGGTGCTGGGACAATTGCCCTCTCAAACGCCCTCAGTTCTCGGAGATCATATCCACCCTGCAAAAGCAGAGCC
TGAGATAG------------------------------------------------------------------------
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>chr4A_1_TraesCS4A01G111900
AAATGGACAAGACAGACACACACACAGGCAGGCAGCAGCCGCCGCAGAGAAGCCATCCTTTCTCGTGATACCATCAATGT
ATTGCCACAGCCGGGGGAGATGAAATGAAAGGAAAT-CC--CTTTTTTTACCACGTCT-TGTCCGAAACTTCCATGCTCG
CTGCAGATTATTTACCGCCGTCCGTCTCTCTCGAGAATGCGCATCTCTGTCCAAGCGTCTAGTGCTAATCACCCTTTCAA
AGCTAAACATAGTTAG----------------------------------------------------------------
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------------------------------------TTAGTGCTAATCCCTTGCATACAGATACAGTGCGTGAGACAAAA
AAGACGAGGCTCATACATACAAGGGCATTTGCAAGGAATCTCATCCTTAACTGGGTTTTCTGCGCCTGTCAAGCGCAGCA
AAATCACATGAGCGCACCAAACCCGCCCTCCTTAAAATAATCGCGCCTCTACACCAGCCCCACCCTCTCCCCATGATGCA
TGTTCCTCCACCTCCACCTCTCTCC----CCCTCCCTCCCTGTCATGGGCCAGAGCCCCTCTCTCT---CTGCTCTGCTC
TGCTCCGCTGCTACAAAAGACGGCATCGTTTTC-TGCCCCCCTCTCCTGCTTGTCCGGCTCCTTTCTCCCCCTCCAGTCC
TGCCCCATTCCAGCTGAGCCGGGAAGCTGGACACGC----------ATAGCTATGCAGAGGAGGAAGCATCACATC----
----------------------TCGTGATCCCCTCACAAATCCACCAAGAACGGCATTCTCCGAGCTGTCCCTCT---TG
CTGCTTCACCTACTCCTTTTGCAGTGTTTTCCTAGTTCCTACTAGCAGTCTCCAGTCTAGCACCGCACCAAGAACCAAGA
AATCCAGCAGAAGGGATTGATTCCATCCTTTTTGCGCCTACTCTGTCCCAATCTGCCACGCACAAGTTGCCGAGACAAGA
ACCGCTCTTGCAAGATCTTGCCATACTCCTCCAGCAATTTGGCGCCAGCTAGGCTGCCAATCTCGCGCCGGAGGTTGAGA
TTTAGAGGCGGGAGAAGCCTAGTCTCCAGCGATGGCGGCCGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGG
AGTCCATGGTGGAGCAGGTTCTCATGAAGCCCCACGCCCGCTCGGACGGTTCGCTCCCCACCTGCGCTGACTCGGTCGGC
GCGGGTGACCCGATTTCGGGCCCGGCGGCGCCCAAGAAGTGGCAGCGCCTGGGCCGCAACTTCGCCGGCGCCATCGCGGC
ATTCAAGAACACGCTCAACCTGGACAACGGCGGCGTCCCCCGCGACCCCTCGCCGCGCGCCGGCGGCGAGAAGCCGCCGC
TCCTCCTCCGCGGCCTCGCGCAGCTCTACTCCCGTGGCGCCGCAGCCCAGCAGCTGCCGGAGAAGCTCGTTTCTGACCTC
CGCCGCCACTTCGATGCTCTTCCCAACAGGTGAGCGACCATCTTCGC--AAGTTCTGGAACAGACGAAATTTTGCCGCGG
CATCAAGCGGCCACATACC--------------------------------------ACT-TAAACTGCTTCC-TGTTTC
TAATTTCTATACAGTATTTACGACC--TTTTATCTGGTTTGTTAAACCAGAGGTGCTAAATCAAGCGCATA----ATTTA
TTTATTTGGATGTGCTGAATGGTTCCGTTGCTGACGGTCAGAAATCTCGGTTTTGCAGCTACGCACAGGCAGGATTTGAC
ATGAAAGATGTCCTCTTGCACGCCCGCCTTGTAGAGCAGGCGGCCGGTGAGGATCAGCCTGCACTGAGCATCGAGGAAGT
TCATGGCAGCAATGGCAGAGAAAGTGGTGCCGAGGGCACTGTATTTCAGCTCACCTTTGCCTGCAACGCCCCACTTTCAT
GGCAGTCAATGTCAGGCTCACTCGACAGCCCATTGTTCAGTTGCAAGAAGATCCAGATCTTCGAGAAGAGAGGACTGACA
CTTGGTGTCGTCCTGATAATTGTGCAATCCGGGAGCGAGGAGCTCTTCAAGAGCCGGGTCGAGGCCGCGCTAAAATCGGC
GACAAAGAAGCATCGGAAGAACAGTGGAGGCGGCGGTGGCGGTGTGAAGCTCCCCTTCGGGCTCTGCGGCTGCCAGGAAG
AAGGATCGCGCAACTTCGACGAGGAGTCCATGTTTGATCCCGAGGAAGGCCAGGATCTTGACAATGAGCCTGCTCGCAGG
CCATACCTTCCCACTCCCCTACCACAATCATCAGTCTTTGTCTCAGTAGATGAGTGGCAGACCGTCCGATCCGGGGGCGA
GGAGCTCGGCCGCTGGATTGTGAGCTCCGAGGAGATCGAATTCGTCGACTGGGTTGGCCAAAACTCGTTCAGGGGAGTCC
ACAGAGGAAGGAAGGTTTGGGTTAACAAAATGAGGGGTTGCAACATGGGCAGTGCTTACGATGTCGAGATCCGTCAGGAC
TTGCTGCAACTGATGAGCTGCGGTCAGAAGAACATCCTCCAGTTCCATGGCATCTGCTTCAACGAGAGCCATGGCCTCTG
CATAGTGACTAGGATGATGGAAGGGGGCTCGGTTCATGACATCATTATGCAGAGAAACAAGAGACTGTCGCTCCGGGACA
CGATTAGGATTGCTCTTGATGTTGCTGATGGCTTGGCGTTCATGAACGGCTACGGCATTGCGTACCGTGATCTTAACGCA
CGAAGGATCCTGCTAGACAGACAGGGAAATGCCTGCCTTGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGCGA
GGTTACTGAGTATGAGACGTCTGGGTATCGCTGGCTAGCTCCAGAGGTTAGTTTTCTTGACTTGATTTAATGTAAATAAA
CTCTTCTAGAAATGCTCTTTCTGAAAGCGAGTTTAGTCCCAGCATGCTAGAAGTTCTTTCTTTGAGCTAATTGCTCTATT
TTAACTGTAGCCATTATCTGGGATCTTCAAGTAACCCAGTAAAACAGCAACATTGACGATGAAACATGTA----TTTTTA
CTTGTCATCCTGTAGGAGTACATAGAACTCTAGGACAAACCGTGTAGAACACTGCATCATCTTGCCTTTTAATTTTATGA
GCAGAGCATAATAAAACTTCAAATACGAAATGT-GAAAGAAATACTACTTTGATCTGACCAACTTGATGCTCTTATGCAC
TAGATCAGCCTGCCAATGCCAGTTAGTAGTACTATCTTGTGTCCACCCAATGGTCAGGGAATCCATCCTTTTAACCCTGA
AAAACCAATTTTGTGCTCCTATTGTACTCCTTATCATCCTTTT-----------------AAGCTTATGTTAT-CTGAAC
CTATCCTTACTGAGAGGTGGTTACTTAAATGCTTTGTTTACAGATCATTGCTGGAGATCCAGAAAGCGTATCGGAGACCT
GCATGAGCAACGTCTACAGCTACGGCATGGTTCTGTGGGAGATGGTGACCGGCGAGGAGGCCTACTCGACGTACTCGCCG
GTGCAGGCGGCGGTGGGGATCGCGGCGTGCGGGCTGAGGCCGGAGATACCGAGGGACTGCCCGCCGTTCCTGAGGTCGCT
GATGAGCCGGTGCTGGGACAATTGCCCTCTCAAACGCCCTCAGTTCTCGGAGATCATATCCACCCTGCAAAAGCAGAGCC
TGAGATAGTTTTTTTCTC--TTCTTCTTTCTTTTTCTTTCCTTTTTACCATTATAAATCATGCTATAGTAGTATATGTGC
TATGTTTGGCTGAGTGCCCAGAGATGCAGGAGACTGCATATGAGAT-----GAGATGAGATGAGAAAAAGTATAATATAT
GTGCAAAGGCTTGATATATTT----TGCTGCCGTTTCTTGCCCAATGCATGCATCTTGGATGAGCTATGTTAGTAGGTCC
CCACATCCACATGTAGAGTGAGTGAGATGAAAAATCAACAGAGAGCATCAAAGATTTAGTTTAGCGGACGGATCTATAGG
ACAAGGGACAGTTGTTTTTTGCTTGCCCTCCCTATCCTATGCTATCATCCACAACGAACTAACTGCACAGTGAGTCCATG
CAATGCTCTTGGGACACTTGGACGCAGGCTGCTCATCTCATCTGCTGCTATAAACAATGGTGGATCTCATCT--------
-------------------------------CCTTTGTTTTGTTTGACCCGTTCAAGGGTGCGGCTGGCT----GGCTGG
CACGCACACCTGGGCTGGGTCCAAATTTGACGAGC----AAACAGCCCTTGGATCGTTTCCACACCACATCTGGCGATTA
ATCAGTGACTGAGCGT-----GATGCATGTGCGGCTGT--TCCTCCAAAGTTCATGGCCATCATTAGTTTCCAAGGAACG
GTGCAAACCCTACGTAGTA--TGTACGACTTTGTCATTCTTGTATGCGGCCAAATAAGACGATGATGCTTTCTCTTTTTC
GTGCCTCTTTGATTCGCGGGATTGAAAAAACACAGGAATAGGAAAAATGTAGGATTGAAATGACATGCCCATTGGATTCC
TATAGAATTTGAGTTTGTTTGATTGTATCACAGAAAAAATAAAGGATTTCTTCCAAAAGGTCCGAGCCCATCCACCTCCT
CCCTCTCCAGCTCCGGCGCTCTGCCCACAGTCGGACGCTCCGCCCATGCTCCAGCACTCCGCCATGGTCCGACGAGATGG
CCGAGCAACAGGGCATCCTGGAGTCCATCCAGAAT
>chr4B_23
CACAGCAGCCGCTGCTGCA----------------------CTGCAGAGAAGCCATCCTTTCTCGTGATACCATCAAGGT
ATAGC--CAGCCAGGGGAGATGAAATGAAATGAAAGCAAGGTTTTCTTTACCACGTCT-TGTCCGAAACTTGCATGCTCG
CTGCAGATTATTTACCGCCGTCTGTCACTCTCGAGAATGCGCTTCTCCGTCCAAGCGTCTAGTGCTAGTGA---------
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-------------------------------------------------CTTGTATACAGATACAGTGTGTGAGAC-AAA
AAGACGAGGCTCATACATACAAGGGCATTTGCAAGGAATCTCATCCTTAATTGGGTTTTCTGCGCCTGTCAAGCGCAGCA
AAATCACATGAGCACACCAAACCC-CCCTCCATAAATTAATCACGCTTCTACACCAGCCCCACCCTCTCCCCATGATGCA
TGTTCCTCCACCTCCACCTCTCTCTCCCTCCCTCCCTCCCTGTCATGGGCCAGAGCCCCTCTCTCT---CTG--------
--CTCTGCTGCTACAAAAGACGGCATCATTTTTTTGCCTCCCTCTCCTGCTTGTCCGGCTCCTTTCTTCTCC-----TCC
TACCCCATTCCGGCTGAGCCCAGAAGCTGGACACACACAGGAACAAATAGTCATGCAGAGAAGGAAGCATCACATCCCAA
AATATCCCACAGGATAAACATCTCGAGATCCCCTCACAAATCCAGCAAGAACAGCATTCTCCAAGCCGCCCCTCTTGCTG
CTGCTTCACCTACTCCTTTTGCAGTGTTTTCCTGCTA-CTAGCAGCAGCCTCCAGTCCAGCAGCACATCAAGAACCAAGA
AATCCAGCGAAAGGGATTCCATCC-----TTTTGCGCCTATTCTCTCCCAATCTGCCACGCACAAGTTGCCGAGGCAAGA
ATCGCTCTTGCAAGATCTTGTTCTACTCCTCCAGCAATTTC------GCTCGGCTGCCAATCTTGCGCCGGAGGTTGAGA
TTTAGAGGCGGAAGAAGCCGAGTCTCCAGCGATGGCGGCCGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGG
AGTCCATGGTGGAGCAGGTTCTCATGAAGCCCCACGCTCGCTCGGACGGCTCGCTCCCCACCTGCGCTGACTCGGCCGGC
GCGGGCGACCCGATTTCCGGGCCGGCGGCGCCCAAGAAGTGGCAGCGCCTGGGCCGCAACTTCGCCGGCGCCATCGCGGC
ATTCAAGAACACGCTGAACCTGGACAACGGCGGCGTCCCCCGCGACCCCTCGCCGCGCGCCGGCGGCGAGAAGCCGCCGC
TCCTCCTCCGTGGCCTCGCGCAGCTCTACTCCCGCGGCGCCGCCGCCCAGCAGCTGCCGGAGAAGCTCGTTTCTGACCTC
CGCCGCCACTTCGATGCTCTTCCCAACAGGTGAGCGACCATCTTCTC--AAGTTCTGCAACAGTGGAAGGTGGCGGACAT
--TCAAGCGGCCACATACC--------------------------------------ACTGTAAACTGCTTCCGTGTGTC
TAATTTC--TACACTATCTGCGAC--TTTTTATCTGGTTTGTTTAATCAGAGGTGCTAAATCAAGCACAAAATTTATTTA
TTTATTTGGATGTGCTGAATG-----GTTGCTGACAGTCAGAAATCTCGATTTTGCAGCTACGCGCAGGCAGGATTTGAC
ATGAAAGATGTCCTCTTGCATGCCCGCCTTGTAGAGCAGGCGGCCGGTGAGGATCAGCCTGCACTGAGCATCGAGGAAGT
TCATGGGAGCAATGGCAGACAAAGTGGTGCCGAGGGCACTGTATTTCAGCTCACTTTTGCCTGCAATGCCCCACTTTCAT
GGCAGTCAATGTCAGGCTCACTCGACAGCCCATTGTTCAGTTGCAAGAAGATCCAGATCTTCGAGAAGAGAGGATTGACA
CTTGGTGTTGTCCTGATAATTGTGCAATCCGGGAACGAGGAGCTCTTCAAGAGCCGTGTCGAGGCCGCGCTAAAATCTGC
GACAAAGAAGCATCGGAAGAACAGTGGTGGCGGTGGCGGCGGTGTGAAGCTCCCCTTCGGGCTCTGCGGCTGCCAGGAAG
AAGGATCACGCAACTTCGACGAGGAGTCCATGTTTGATCCCGAGGATGGTCAGGTTCTTGACAATGAGCCTGCACGCAGA
CCATACCTTCCCACTCCCCTACCACAATCATCAGTGTTCGTCTCAGTAGATGAGTGGCAGACCGTCCGATCCGGGGGCGA
GGAGCTTGGCCGCTGGATTGTGAGCTCCGAGGAGATAGAATTTGTCGACTGGGTTGGCCAAAACTCGTTCAGGGGAGTCC
ATAGAGGAAGGAAGGTTTGGGTTAACAAGATGAGGGGTTGTAACATGGGAAGTGCTTACGATGTGGAGATCCGTCAGGAC
TTGCTGCAACTGATGAGCTGCGGCCAGAAGAACATCCTCCAGTTCCATGGCATCTGCTTCAATGAGAGCCATGGCCTCTG
CATAGTGACTAGGATGATGGAACGGGGCTCAGTTCATGACATCATTATGCAGAGAAACAAGAGGATGTCTCTCCGGGACA
CGATTAGGATTGCTCTTGATGTCGCCGACGGCTTGGCGTTCATGAACGGCTACGGCATTGCCTACCGTGATCTTAATGCA
CGAAGGATCCTACTAGACAGACAGGGAAATGCCTGCCTTGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGCGA
GGTTACTGAGTATGAGACATCTGGGTATCGCTGGCTAGCTCCGGAGGTTAGTTTTCTTGACTTGATTTAGTGTAAACTAC
TA------------CTATTTCTGAAAGAAAGTTTAGTTCCAGCATGCTAGAAGTC----CTTTGTGCTAGTTGCTCTGTT
TTAACTGTAGCCACTATCTGGGATCTTCAAGTAACCTAGTAAAACATCGACATTAACGATGAAACATGTAATTTTTTTTA
CTTTTCATCCTGCAGGAGCACATAGAACTCTAGGACAAACCGTGTAGAACACTGCATCATCTTGCT------TTCTATGA
GCAGAACATAATAGAACTTCAAATACAAAATGTGGAAAGAAGTACTGCTTTGATCTGACCAACT-GATGCTTTTATGCAC
TAAATCAGCCTGCCAATGCCAGTTAAC---ACTGCCCTGTGTCCACTCAGTAGTCAG-GAATCCATCCTTGTAACCCTGA
TAAACCAATTTTGTGCTGCTATTGTACTCTTTATCATCCTTGGACATTCTATTACACTTGAAGCTTATGTTATACTGAAC
TTGTCCTTACTGAGAAATTGCTTTG---ATGCTTTGTTTACAGATCATTGCTGGAGATCCAGAAAGCGTATCGGAGACCT
GCATGAGCAATGTCTACAGCTACGGAATGGTTCTCTGGGAGATGGTGACCGGTGAGGAGGCCTACTCGACGTACTCGCCA
GTGCAAGCGGCGGTGGGGATCGCGGCGTGCGGTCTGAGGCCGGAGATACCGAGGGACTGCCCTCCTTTCCTGAGGTCGCT
GATGAGCCGGTGCTGGGACAATTGCCCTCTGAAGCGCCCTCAGTTCTCGGAGATCATATCCACCCTGCAAAAGCAGAGCA
TGAGATAGTTTTTTTTCC--TTTTTCTTTCCTT--------TTTTTACCATTATAAATTATGCTATAGTAGTATATGTGC
TATGTTTGGCTGAGTGCCCAGAGATGCAGGAGACTGCATATGAGAT-----GAGATGAAA----AAAAAGTATAATATAT
GTGCAAAGGCTTGATATATTTATTTTGTTGCCTTTTCTTGCCCAATGCATGCATCTTGGA-----TATGTTAGTAGGTCC
CCACATGTT------GAGTGAGTGAGATGAAAAATCAAGAGAGAGCATCAAAGAT-----TTAGCAGACGGATCTATAGG
ACAAAGGACAGTTGTTTTTTAGCTTGCCCTC----CCTATCCTATCATGCACAACGAACTAACTGCAC----AGTCCATG
CAATGCTCTTGGGACACTTGGACGCAGGCTGCTCA-----T---CTACTATAAACAATGGTGGATCTCATCTGGTGGAGA
GGTCAAGATGTGTTTAGAGGAGTAGAGCGATCCTTTTTTTTGTTTGACCCGTTCAAGGGTGTGGCTGGCTGGCTGGCTGG
CACGCACACCTGGGCTGGGTTCAAATTTGACGAGT----AAACAGCCATTGGATCGTTTCCACCCCACATCTGGCGATTA
ATCAGTGACCGGGCGT-----AATGCATGTGCGGTAGTTCTCCTCCAAAGTTCATGGCCGTCATTAGTTTCCAAGGAACA
GCGCAAACCCTACGTACGTACTGTACGACTTTGTCATTCTTGTATGCGGCCAAATAAGATGATGATGCTGTCTCTTTTTC
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-----------------------------------
>chr4D_33
--------------------------------CAGCAGCCGCTGCAGAGAAGCCATCCTTTCTCGTGATACCATCAAGGT
ATTGCCACAGCCAGGGGAGATGAAATGAAAGGAAGTCCC--TTTTTTTTACCACGTCTTTGTCCGAAACTTCCATGCTCG
CTGCAGATTATTTACCGCCGTCTGTCACTCTCGAGAATGCCTTTCTCTGTCCAAGCGT----------------TTTCGA
AGCTAAATGTAGTTGGGCGACCTATTTCGTTCGCTGCCTTCCGTTTGGGTTGGCGCGGACACAAAAAGCGGCCCAACGCG
CCGAGCAAAACGGACACGCGTCCGCTTGGCGTCCGCATGGCGATCTATTCCCGACCCAATTTTAAGCTGGATTTGCGTCG
GCGCGGACACGCGACGGACGTGCACGCGCGCCTACTCCTCTCCCCGGCCTGCTGGTCGGTGGCAGCCACCACCATTTTCC
CACATTCCCCCAAAACCCCTCCCGCTCACGCGCGCTCCCGTCCCGCACCCGCCATGGACGACGACATCGACCTCGACGCC
GCCGCCGGCCTCGCCTCCCTCGCCTCTGCCGGCGCCGCCGCCGCCCCCTCCGGGAAAGGCAAGCCTCGTGCCCCGCGCAA
GACTGTCGCCGCGCCCAAGCCAAAGAAGCCGTTGAAGCCCGAACAGCGGGCAAGGGAGTCAGCCAGGAGGAAGGGCCAGA
GGCACGCCGCGGACATGAGGGGGTGAGGCCGCCACGCACGCCGCCGTCGCCGCCGCCGCGCAGCAGGAGGTCACCAACAC
CCGCGTCGCGGCGGCAACGAGGGAGGCGCTCTACATGCTAGGGTTAAACCATGGCCAACACGGCCTCGTCAACGCCGCCG
TCGCCGCGACCAGCACCTGTCATCGGCGTTCCCTCGGATAGTGCTGCCCGACTCGCCCCGCGCGTCGGCTTGCAACCCGA
TGCCCGGCTTCCACGTGTACCCGCAGGCCTCCCGCCTCTCCGGAGAGTGCTTGCCTGACGTGAGCGTGGTCACGCCTTCC
ACGCCCGCGCCCATCGACCTCAACGCCACCCCCGTGGTCGATGGCTCGTCATCCGGAGGCGCGAGGAAACGCGCGCGGCA
GACGTCGCCCGGCGTGCTCCCGGACGCCCGCAACCTGTTCAAGGGAATGTCGTCCGCCGTCGACGAGGACTACATGCAGA
ACCTCATCTTCGAGGGCGATGCGCCGGCCGCTGGCTATGATCCCGACGAGACACAAAGCCAGGACGGCCGCGGGGCGTTC
ACGCCGGCTGCTGGCTATGATCCCGATCAGGCGGCCTTCATGTGTGATCAGGTCGGCATGGACCTCGACGGCTTCCCACT
GGACCACGAGTTCCCGGACGACTACGGGCTAGATGAAGAGGACGAGTGCGACATCGAAGTGGAGCCTTTGTTCGAGGACG
AGCTCGCCAACCAAGCCGTCGGTCCTAAGCCGAAGCGCAAGAGCAAGCACATGAAGGCATACACGGCTGCCGAGGACAAG
CTTCATTGCGAGTGTTGGCGGGACATTGGACAAGACCCCCAGACGGGCGCCGAACAAAAACATTCAACCTTTTGGATTCG
TGTCCACCGAGAGTTTCATGGGCGCAAAAAGTTTCCGCCTTATCAAATTGTGAGCACACGCGGGTGGGTGCCCATTTCCA
AGCGATGGAACAAGAGTGCAACAAGTTTTGTGCCACTCTTGAGAGCGTCAAGGCCCGCCCCGTGAGCGGCATCGGCATGC
AAGACATGGTATGCTAGCAAGCCGCCCTCTTTTTTGTGTCATCAAGTTCATGCTTGCGTGTTCATTTGCATATCATTTGC
CCATATGCTTGCATTGAAACATTTTGTAGGCATTTCAAGCTTTGGAGGCATTCAAGGTTCAACACAATGGCAAATGCTTC
AACCTCTCCCATTGCTTTCGGATCTTCAAGGACGAGAAGAAGTTCAAGGCGCAATATGCCGCCATCAAGGCGCGTGGGGG
GAAGCAAGCCGTGGAGGAGGTTGGGGAGGGCGAGTCGGCACGGCCGTGGGGGAAGACCAACTCCAAGAAGGAGGACAAGC
GGGATGCGGCATACAACGCCTTGATCTCAAGCATGGAGGGCATGATGAACAAGAAGGACTCAAGGGAGGAGGGGCGCCGG
CGTTTCAAGGAAGAGCAAATGAACGCCTTCATGAAGATCCAAAAGAGGAGGCTTGAGATGGATGCGAAGACTCAAGCCAA
GATGCTCGAGCTGGAGGCGGAGAAGCAAGCCAAGATGCTAGAGATCGAGGCCACCAATGCCAAGACCAAGGCGAAATAAG
TGGCTCTCGCGAGCATGATGACCGGGGTGGAGATCATGAAGGTGGATCTCAACACTGTGTCGCCAAGGAAGAGGCCGTGG
TTCGAGAAGATGCAGGCCGACATGCTCAAGTTCACCGACGAGTGATCTCGTCGCCGCGAGCGCCACCCTTTTTTTGTATG
CCGGCTTGTGTGCTGGCATGACCACGAGGCCGCGATGGCGTGGTTGAACTCAAATCCCACCCTTTTTGTGTGCTGACATG
TGTGCCGGCCGCTGGCGAGTGCGCCAGCATGAACTGCGGTGATATTTTGGAAGCCGGCAATGTATGCCGGCGCTGGCATG
GTGTCGGCATGATCTATGGCCGCTGGCATGATCTGTGGCCGCGGGCCATTTTTAAAAATTGAGTGCGGACATGAAATAGG
TCGGCGCGTTGGGCGCACTGCCGACTCAAATGCAAAGCTGGGCGGACGCCGGCAGGCGGCCGAGCCCAAATGGACAAAAA
GCGGATAAATACGCCGTCCGTTTGGGTTGGCTGCTCTTAGTGCTAATCACTTGCATACACATGCAGTGTGTGAGAC-AAA
AAGAGGAGGCTCATACATACAAGGGCATTTGCAGGGAATCTCATCCTTAAATTGGTTTTCTGCGCCTGTCAAGCGCAGCA
AAATCACATGAGCGCACCAAACCCGCCCTCCATAAATTAATCACGCTTCTACACCAGCCCCACCCTCTCCCCATGATGCA
TGGTCCTCCACCTCCACCTCC------------CCCTCCCTGTCATGGGCCAGAGCCCCTCTCTCTGCTCTG--------
--CTCCGCTGCTACAAAAGACGGCATCATTTTTT-GCCTCCCTCTCCTGCTTGTCCGGCTCCTTTCTTCTCC-----TCC
TGCCCCATTCCAGCCGAGCCGAGAAGCTGGACACACACAGGAACAAATAGCTATGCAGAGGAGGAAGCATCACATCCCAA
AATATCCCACAGGATAAACATCTTGAGATCCCCTCACAAATCCAGCAAGAACGGCATTCTCCAAGCTGTCCCTCT---TG
CTGCTTCACCTACTCCTTTTGCAGTATTTTCCTAGTTCCTACTAGCAGTCTCCAGTCTAGCAGCACATCAAGAACCAAGA
AATCCAGCGAAAGGGATTGATTCCATCCTTTTTGCGCCTATTCA---------------GCACAAGTTACCCAGACAAGA
ATCGCTCTTGCAAGATCTTGT----------CAGCAATTTGGCGTCAGCTCGGCGGCCAATCTCGCGCCGGAGGTTGAGA
TTTAGAGGCGGGAGAAGCCTAGTCTCCAGCGATGGCGGCCGCGCTGGAGTGCTGGTCGGGCCGGCCGAGCACCGACGAGG
AGTCCATGGTGGAGCAGGTTCTCATGAAGCCCCACGCTCGCTCGGACGGCTCGCTCCCCACCTGCGCCGACTCGGCCGGC
GCGGGCGACCCGATTTCGGGCCCGGCGGCGCCCAAGAAGTGGCAGCGCCTGGGCCGCAACTTCGCCGGCGCCATCGCGGC
ATTCAAGAACACGCTGAACCTGGACAACGGCGGCGTCCCCCGCGACCCCTCGCCGCGCGCCGGCGGCGATAAGCCGCCGC
TCCTCCTCCGCGGCCTCGCGCAGCTCTACTCCCGCGGCGCCGCCGCCCAGCAGCTGCCGGAGAAGCTCGTTTCTGACCTC
CGCCGCCACTTCGATGCTCTTCCCAACAGGTGAGCGACCGTGTTCTCAAAAGTTCTGCAACAGTGGAAGTGCCAAAATTT
TGCTGCAATCAACATTAGTAGATGTCAAGTTTACACGTTAGTGTTTGCCATCAAGCTACT-TAAACTGCTTCCGTGTTTG
TAATTTC--TACAGTATTTACGACTTTTTTTTTCTGGTTTGTTAAACCAGAAGTTCTAA---------------------
-----------------AATG-----GTTGCTGACAGTCAGAAATCTCGGTTTTGCAGCTACGCGCAGGCAGGATTTGAC
ATGAAAGATGTCCTCTTGCACGCCCGCCTTGTAGAGCAGGCGGCCGGTGACGATCAGCCTGCACTGAGCATCGAGGAAGT
TCATGGCAGCAATGGCAGAGAAAGTGGTGCCGAGGGCACTGTATTTCAGCTCACTTTTGCCTGCAATGCCCCACTTTCAT
GGCAGTCAATGTCAGGCTCACTCGACAGCCCATTGTTCAGTTGCAAGAAGATCCAGATCTTCGAGAAGAGAGGATTGACA
CTTGGTGCTGTCCTGATAATTGTGCAATCCGGGAGCGAGGAGCTCTTCAAGAGCCGTGTCGAGGCTGCCCTAAAATCGGC
AACAAAGAAGCATCGGAAGAACAGTGGCGGCGGTGGCGGCGGTGTGAAGCTCCCCTTCGGGCTCTGCGGCTGCCAGGAAG
AAGGATCACGCAACTTCGACGAGGAGTCCATGTTTGATCCCGAGGATGGTCAGGTTCTTGACAATGAGCCTGCACGCAGA
CCATACCTTCCCACTCCCCTACCACAGTCATCAGTGTTTGTTTCAGTAGATGAGTGGCAGACCGTCCGATCCGGGGGCGA
GGAGCTTGGCCGCTGGATTGTGAGCTCCGAGGAGATCGAATTCGTCGACTGGGTTGGCCAAAACTCGTTCAGGGGAGTCC
ATAGAGGAAGGAAGGTTTGGGTTAACAAAATGAGGGGTTGTAACATGGGCAGTGCTTACGATGTCGAGATCCGTCAGGAC
TTGCTGCAGCTGATGAGCTGTGGCCAGAAGAACATCCTCCAGTTCCATGGCATCTGCTTCAATGAGAGCCATGGCCTCTG
CATAGTGACCAGGATGATGGAAGGAGGCTCAGTTCATGACATCATTATGCAGAGAAACAAGAGATTGTCGCTCCGGGACA
CGATGAGGATTGCTCTTGATGTCGCCGACGGCTTGGCGTTCATGAACGGCTACGGCATTGCCTACCGTGATCTTAACGCA
CGAAGGATCCTACTAGACAGACAGGGAAATGCCTGCCTTGGGGATATGGGCATTGTTACCCCTTGTAATAATGCTGGCGA
GGTTACTGAGTACGAGACATCTGGGTATCGCTGGCTAGCTCCGGAGGTTAGTTTTCATGACTTGATTTACAGTAA-----
-A------------CTATTTCTGAAAGAAAGTTTAGTTCCAGCATGCTAGAAGTC----CTTTGAGCTAGTTGCTCTGTT
TTAACTGTAGCCATTATCTGGGATCTTCAAGTAACCCAGTAAAACGGCGGCATTAACGATGAAACATGTT-TTTTTTTTA
CTTTTCATCCTGCAGGAGCACATAGAACTCTAGGACAAACTGTGTAGAACACTGCATCATCTTGCT------TTTTATGA
GCAGAACATAATAAAACTTCAAATACAAAATGTGGAAAGAAGTAGTGCTTTGATCTGACCAACTTGATGCTTTTATGCAC
TAAATCAGCCTGCCAATGCCAGTTAAC---ACTGTCCTATGTCCACTCAGTAGTCAG-GAATCTATCCTTGTAACCCTGA
TAAACCAATTTTGTGCTGCTATTGTAGTCTTTATCATCCTTGGACATTCTATTACACTTGAAGCTTATGTTGTACTGAAC
TTGTCCTTACTGAGAAATTGCTTTG---ATGCTTTGTTTACAGATCATTGCTGGAGATCCAGAAAGCGTATCGGAGACCT
GCATGAGCAACGTCTACAGCTACGGGATGGTTCTCTGGGAGATGGTGACCGGCGAGGAGGCCTACTCGACGTACTCGCCG
GTGCAGGCGGCGGTGGGGATCGCGGCGTGCGGGCTGAGGCCGGAGATACCGAGGGACTGCCCGCCTTTCCTGAGGTCGCT
GATGAGCCGGTGCTGGGACAATTGCCCTCTGAAGCGCCCTCAGTTCTCGGAGATCATATCCACCCTGCAAAAGCAGAGCA
TGAGATAGTTTTTTTCTTCTTTCTTCTTTCTTTCCT-----TTTTTACCATTATAAATTATGTTATAGTAGTATATGTGC
TATGTTTGGCTGAGTGCCCAGAGATGCAGGAGACTGCATATGAGATGAGATGAGATGAAA----AAAAAGTATAATATAT
GTGCAAAGGCTTGATA----TATTTTATTGCCTTTTCTTGCCCAATGCATGCATCTTGGAT----TATGTTACTAGGTCC
CCACATATG------GAGTGGGTGAGATGAAAAATCAAGAGAGAGCATCAAAGAT-----TTAGCAGACGGATCTATAGG
ACAAAGGACAGTTGTTTTTTGCTTGCT-CTC----CATATCCTATCATCCGCAACGAACTAACTGCAC----AGTCCATG
CAATGCTCTTGGGACACTTGGACGCAGGCTGCTCA-----TCTGCTGCTATAAACAATGGTGGATCTGATC---------
------------------------------TCCTTTGTTTTGTTTGACCCGTTCAAGGGTGCGGCT--------GGCTGG
CACGCACACCTGGGCTGGGTCCAAATTTGACGAGCAACTAATCAGCCCTTGGATCGTTTCCACACCACATCTGGCGATTA
ATCAGTGACTGAGCGTAATGTAATGCATGTGCGGTAGT--TCCTCCAAAGTTCATGGCCATCATTAGTTTCCAAGGAACG
GTGCAAACCCTACGTAC-----GTACGACTTTGTCATTCTTGTATGCGGCCAAATAAGATGATGATGCTTTCTCTTTT--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>SNPs
S-SS-S-SSS-SSSSSSSSSSSSSSSSSSSSS----------S----------------------------------S--
------------S----------------------------S--------------------------------------
----------------------S---S---------------S------------------------S-S-SSS----S-
-------SS-----S-----------------------------------------------------------------
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------------------------------------------------S-------------------S-------S---
--------------------------------------------------S-----------------------------
-------------------------------S----S-----S---S---------------------------------
------------------------S-----------------------------------------------SSSSSSSS
SS-------------------------S----S-----S----------------------------S-S--SSSSS---
---------------------S------------S---------------------------------------------
-------------------------S------------------S-----------------S-----------------
--------------------------------------------------------------S-S--S------------
--------SS------------------------------S---S-----------------------------------
-S------------------SSS---------------------S-----S-----------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----------S-------------------------S----
-----S--------------------------------------------------------------------------
---------------S----------------------------------------------------------------
----------------------------------S--------S------------------------------------
---------------------------------------------S-----------S-----SS---S--SSSSSS-SS
SS------------------------------------------------------------------------------
-------SS---------------S-----------------------------------------S--S----------
---------------------SSSSS---------S----------------------------S---------------
--------------------------------------------------------------------------------
------------------------------------------------------S-----------S-------------
--------------------------------------------------------------------------S-----
--------S-----------------------------------------------S-----------------------
---------------------------S-----S--S-------------------------------------------
-------S--------------------------------------S--S----S------------------S-----S
-----------------------------------S--------------------------------------------
------S-------------------------------------------------------------------------
-S--------------------------------------S---------------------------------------
-----------------------S--------------------------------------S-----------------
------------------------------S---------------------------------S---------------
----------------------S--S--S--------------------------------S------------------
-----------S--------------------------------------------------------------------
------------------S-----------------------S--------------------------S------SS-S
SSSSSSSSSSSSSS--S----------SS--------S----------------SSSSS----------S-------S--
------------------------------------------------S-----S-------------------------
---S--------S-----S----------------------------------------------SSSSSSS--------
-----S--------------------S--------------S----S------------------------S--------
--S----------------------SSSSS---S--S---------S--S-S-----S------------S---------
S----------------S-----------S-----------SS-------------------------------------
S-S------------SS-S-S-SSSSSS----------------------------------------------------
-------------------------S--------S---------------------------------------------
-----------------------------------------------------------------S--------------
------------------------------S--S---------------------------------------------S
---------------------------------SSSSSSSS-----------------S---------------------
----------------------------------------------------------S-SSSS----------------
---------------------------S----S----------------------------SSSS---------------
------SSSSSSSSS-----------------------S----------------SSSSS-----S--------------
----S-----------------------SS-SSSS-----S---------------------------SSSS--------
-----------------------------------SSSSS----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------S------------SS--------------------------------------------
----------------SSS----------------------------------------S--------------------
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_29
---------AGACAGACACACACACAGGC---------------------------------------------------
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>reverse_4081
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CATCAAGCGGCCACATACCA------------------------------------------------------------
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-----------------------------------
>forward_3856
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----------------------------------------------------------------------------CGGC
ATTCAAGAACACGCTC----------------------------------------------------------------
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-----------------------------------
>reverse_5001
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----------------------------------------CAACATGGGCAGTGCTTACG--------------------
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>forward_4770
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------------------------------TGTTTGATCCCGAGGAAGGC------------------------------
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>reverse_6428
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---------------------------CTGCCGTTTCTTGCCCAATG---------------------------------
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--------------------------------------------------------------------------------
-----------------------------------
