>input_sequence_31135
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------------------------------------------------------------ATGGCGCACAGCCTCACCGG
CGGCGCCGTCCCCTTCTGCTGCTACCCTTGCCCACCCTGCTGCGCCGCCGGGCGAGCTACCCCGACCGCCCCCCCTTCCA
CCCGCCGCCGTGTGGCCGCCTCGGCGTCCCCTCCGCCGTCCCCGCCGGCCATCGAGGGCCGCGGGGTGGGATTTTCGGTG
ACGACGAGGCGGGGGGTGGTGCTGCCGGTGCTCAAGGACTGCTCACTGTGCGTCCCGCCGGGGCAGCTCTGGATGCTCCT
CGGCCCCAACGGCTGCGGCAAGTCCACCCTCCTCAAGGTCTATCTTTTTCTGAACTACTAC--------TCTGGTGCTTG
TTTCCACGCGCATTTTTATCGATAGACCGGCGGTAGCTGTGCTCACCAGGCCATTGACCGAAATACAGCATGCAAATTAT
CAATTCCAAGACCCATGGTTAAGT---------AGCTGGTCTGTTCTTAAAGAGAATTTTCTTCT-TAGTGTGTAGAACC
AACTCATGGAGTGAATACGATACCACAAGCACAATCTGGTCGTGTTTGATTCAGTTCTCATAAAAGATATTTTTGGAGGA
TTAGGCATAGCATGCATACTTTATCAGAAATCAAAATGCTGAATGGTATCCATT-GAATCTTTGGACTGTCCCGGA-TTT
CCTTTGAGCACCGAGATAAGGGTCTGTGCGACCTAGGAATGGCTCAGAATTTGCTGAGTTTGCGGTCATTCGAGTTGCTT
GAGAA----AAAAAAATGTCAGCCACCA-TCAGGAACCAACAGGAAATTTAATGTGATTACTGATAGTAAATATATCCTG
TAGCATAACTACCAGCATCTTCACGTGTAAATGAGCAATCATGCATCAGATATTGAGTGTATTGTATCAAGTACATTCGA
CTATTGGAGCACTGAACACCAGATCGACATGGTAATTTCACATTTCTCAGGATATATGTTCAACTTCAACCTGAATAAAA
ATTATGACAGGAGTAGTAAGGGAGTATTCTAAGAGAAGTTGCATAATCTGTTCTGGTATTGTTAGAATATA---------
---------------------------------------------------TTTCATAAAGCAGACTGATACAAAATTTG
GTTTTTGAATCAATCTATTTGCTTGCAAGTTTTTCTTTCTCTTTGCATACTTGGACTACAAAACTTTGATAGATTTTCGT
ACTACTAGTACCTCAATGGGATGCTAACTTTTTGTTCTTTTGTAGGTTTTGGCAGGTTTTCAAAATCCCTCTGCTGGTAC
AGTGCACATTAATAGGCCATTCAGCTATGTCTTCCAAAATCCTGATCACCAGGTTATCACTAGTTCTTTGATGATTTTTT
ACCTGCAATTGTGCCAGAACGCATTATCA-AGTGGCTTTGAATTCACAGAATGTTTGTATTGTTGATTCTTGAGAGCTTT
GTTAGTAATGCAATTGTCCCAAATTAAATGAAGTTCTGCTGCATATTGAATTCTGTCTTTTGGATGCAGGTTGTGATGCC
CACGGTGGAATCCGATGTTGCATTTGGTCTTGGTAAGCTCAATCTTTCATTGGATGAGGTTAGGTCAAGAGTGTCACAGT
CTCTGGATGCAGTTGGAATGTTGAGCTACTCTCAAGTAGGCAGCTGACATGCACATTTTGGATTATAATCTACTATTGTC
TGCACAAGGTTCACAAACATCCTTCATCCAAAACAGAGGCCAATCCAAACTCTGAGTGGTGGGCAGAAACAGAGAGTTGC
CATTGCTGGTGCTTTAGCTGAAGCATCCAAAGTACTACTGCTGGATGAGCTGACCACATTCTTGGACGAATATGATCAGG
TATTAAGATTATCCATGTTTAGTTTTTAATAAG-----------------------------------------------
--------------------------------------------------------------------------------
--ATGCACTAAGATATATGATCACGAGGTACCTTTGTTA------------GAGCAATCTTCAGTTAGCATTCCATTTCG
AACTGGAGTTGTAGTTTGGCAATTGCGCTAAAGCTCCCAACAGTCTTTAGTTCATTAAAATTGGTGTAGCCATGGTTCTC
ATAGACACATTACGATTTTGGACTATATTACATATAATTTTCTGATGCTTCTGTCGCATTTGTTGTGTGGTTGATATGCC
TTAGAAGCTATGGCTAACCTACACTGTATTATGTATGGAAAATCCTCTGCTGGTTGTTGAAAT------TATAAGAAATC
GTTATATTTTCCTGTTTCTGATATGTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAATACTAAAGTAGTGATCTAA
ATGCTCTTATATTAGTTTACAGAGGGAGTAGTTATCATCCTTTTTGATTGACTGGTAGTTACCACTTAGCAGGCCTACTC
TTACCTTGTAGTTATAC-----TTGATTGTTATGGGCATTGTAATCTTGGTGATCTTGGTTTCATGAAAGTGCAGATGGG
CGTGGTCAAGGCGGTGAGGAACTCTGTAACTGCTAGTGGGGAGGTTGCGGCACTGTGGGTGACTCATCGGCTGGAAGAAC
TCAGATACGCAGATGGTGCTATTTACATGGAAGATGGCCGGACGATTATTCAAGGCGACGTCTCCAGTATATCCAGATTT
ATAAAGAGGAAACAAGCACGCTACTTTGGTCATTTTGAGCTCTGA-----------------------------------
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------
>chr3D_1_TraesCS3D01G306200
CCCGGTCGATATTCAAGATGTAACCAAACAAGAACGGTTGTGAATAGTGAGATGGCAATCACCCAGATTAACAGGATCAC
ACCACCAAAATTTCCAAACCCATGCATA---CGGATAAGAAGACCTAGCAGCACGCCGCCGGCGCCAGGTAGTCCTTGGC
CCCGTCCTCCACCTGCGCCTGTCCGCCGAACAGGCCGGCCCTGAACAGAAGGAACCCCACCGCGTGGCCGGCGACTGCCA
CGAGGAGCACGCCGACGTTGAACGACATGAGCGCGAGCATGAGGACGTACGCCATCCCGACGCGCAGCGCGTGCACGGCG
GCGCGCGCCGCCCCCGCCGCCACGGGCCGGTCGCGGGAGGAGAGGCGGGACTCGAGCCAGCGGCAGGAGGAGAGGCACTC
CACGAGCACGGCGAGCGCGAAGACGACGAGGAGCGCGAGCGCGTACATGCCGCCGCTCGAGCCGGGCCACCCGTGGAAGA
GGATCTCCGAGTTCTTGCCCCAGTAGAAGGTCATGTGCATGTAGTGCATCCGCATGCCCCCGTGCGCCGCCGCCGCCGCC
GGGGCGGCGCCGCCCATGCCCGTGCCCATGGCGTGCCCTCC---TCCCATGTCCATCGCGCGCTGGCCGCCGATGATGAT
CTGGTGGG---------GTTCGTTGCATCTGCGTCCGCGCCCGCGTGGGTGTATATGTGCGGGGCGGCGCGGCGTGGCGC
GGCGCCTGTGCAGTACGCATGTACGACACTGGGCAGCGAAAGGAAGTACACAGTCGTCAGCCGCGGCTGTCAGTCAGATC
GTAACCACCCACGGCCCACGGGATCTTTTTTCTTGAGGGGTCGGCCCACGGGATCTTTGTGAAGAAGG-ATGGCGGATCC
ATTTTTCC-TCTTCTGTGGACAGGCTTTCAGATTGTGGGCCGATTAGGT---AGCTTGAAGGGTGGGTTGGTCGCGATCT
TCTTTCTAGCCGCCCAGTGTACCGGCCCAGGCCCATCACCTCTTATCGCCCTCGCCGACGATGGCGCACAGCCTCACCGG
CGGCGCCGTCCCCTTCTGCTGCTACCCTTGCCCACCCTGCTGCGCCGCCGGGCGAGCTACCCCGACCGCCCCCCCTTCCA
CCCGCCGCCGTGTGGCCGCCTCGGCGTCCCCTCCGCCGTCCCCGCCGGCCATCGAGGGCCGCGGGGTGGGATTTTCGGTG
ACGACGAGGCGGGGGGTGGTGCTGCCGGTGCTCAAGGACTGCTCACTGTGCGTCCCGCCGGGGCAGCTCTGGATGCTCCT
CGGCCCCAACGGCTGCGGCAAGTCCACCCTCCTCAAGGTCTATCTTTTTCTGAACTACTAC--------TCTGGTGCTTG
TTTCCACGCGCATTTTTATCGATAGACCGGCGGTAGCTGTGCTCACCAGGCCATTGACCGAAATACAGCATGCAAATTAT
CAATTCCAAGACCCATGGTTAAGT---------AGCTGGTCTGTTCTTAAAGAGAATTTTCTTCT-TAGTGTGTAGAACC
AACTCATGGAGTGAATACGATACCACAAGCACAATCTGGTCGTGTTTGATTCAGTTCTCATAAAAGATATTTTTGGAGGA
TTAGGCATAGCATGCATACTTTATCAGAAATCAAAATGCTGAATGGTATCCATT-GAATCTTTGGACTGTCCCGGA-TTT
CCTTTGAGCACCGAGATAAGGGTCTGTGCGACCTAGGAATGGCTCAGAATTTGCTGAGTTTGCGGTCATTCGAGTTGCTT
GAGAA----AAAAAAATGTCAGCCACCA-TCAGGAACCAACAGGAAATTTAATGTGATTACTGATAGTAAATATATCCTG
TAGCATAACTACCAGCATCTTCACGTGTAAATGAGCAATCATGCATCAGATATTGAGTGTATTGTATCAAGTACATTCGA
CTATTGGAGCACTGAACACCAGATCGACATGGTAATTTCACATTTCTCAGGATATATGTTCAACTTCAACCTGAATAAAA
ATTATGACAGGAGTAGTAAGGGAGTATTCTAAGAGAAGTTGCATAATCTGTTCTGGTATTGTTAGAATATA---------
---------------------------------------------------TTTCATAAAGCAGACTGATACAAAATTTG
GTTTTTGAATCAATCTATTTGCTTGCAAGTTTTTCTTTCTCTTTGCATACTTGGACTACAAAACTTTGATAGATTTTCGT
ACTACTAGTACCTCAATGGGATGCTAACTTTTTGTTCTTTTGTAGGTTTTGGCAGGTTTTCAAAATCCCTCTGCTGGTAC
AGTGCACATTAATAGGCCATTCAGCTATGTCTTCCAAAATCCTGATCACCAGGTTATCACTAGTTCTTTGATGATTTTTT
ACCTGCAATTGTGCCAGAACGCATTATCA-AGTGGCTTTGAATTCACAGAATGTTTGTATTGTTGATTCTTGAGAGCTTT
GTTAGTAATGCAATTGTCCCAAATTAAATGAAGTTCTGCTGCATATTGAATTCTGTCTTTTGGATGCAGGTTGTGATGCC
CACGGTGGAATCCGATGTTGCATTTGGTCTTGGTAAGCTCAATCTTTCATTGGATGAGGTTAGGTCAAGAGTGTCACAGT
CTCTGGATGCAGTTGGAATGTTGAGCTACTCTCAAGTAGGCAGCTGACATGCACATTTTGGATTATAATCTACTATTGTC
TGCACAAGGTTCACAAACATCCTTCATCCAAAACAGAGGCCAATCCAAACTCTGAGTGGTGGGCAGAAACAGAGAGTTGC
CATTGCTGGTGCTTTAGCTGAAGCATCCAAAGTACTACTGCTGGATGAGCTGACCACATTCTTGGACGAATATGATCAGG
TATTAAGATTATCCATGTTTAGTTTTTAATAAG-----------------------------------------------
--------------------------------------------------------------------------------
--ATGCACTAAGATATATGATCACGAGGTACCTTTGTTA------------GAGCAATCTTCAGTTAGCATTCCATTTCG
AACTGGAGTTGTAGTTTGGCAATTGCGCTAAAGCTCCCAACAGTCTTTAGTTCATTAAAATTGGTGTAGCCATGGTTCTC
ATAGACACATTACGATTTTGGACTATATTACATATAATTTTCTGATGCTTCTGTCGCATTTGTTGTGTGGTTGATATGCC
TTAGAAGCTATGGCTAACCTACACTGTATTATGTATGGAAAATCCTCTGCTGGTTGTTGAAAT------TATAAGAAATC
GTTATATTTTCCTGTTTCTGATATGTACTCCCTCCGTAAACTAATATAAGAGCGTTTAGAATACTAAAGTAGTGATCTAA
ATGCTCTTATATTAGTTTACAGAGGGAGTAGTTATCATCCTTTTTGATTGACTGGTAGTTACCACTTAGCAGGCCTACTC
TTACCTTGTAGTTATAC-----TTGATTGTTATGGGCATTGTAATCTTGGTGATCTTGGTTTCATGAAAGTGCAGATGGG
CGTGGTCAAGGCGGTGAGGAACTCTGTAACTGCTAGTGGGGAGGTTGCGGCACTGTGGGTGACTCATCGGCTGGAAGAAC
TCAGATACGCAGATGGTGCTATTTACATGGAAGATGGCCGGACGATTATTCAAGGCGACGTCTCCAGTATATCCAGATTT
ATAAAGAGGAAACAAGCACGCTACTTTGGTCATTTTGAGCTCTGATCTTTGGGAGTCCCAAGCTGCAGGCAGAATTATCT
GCTCTTGTGTAGTACGAGTACATCACTACATCATGGTACTAGAAAACAGTTTCTTCTCTACGGCGTTTTGTATGTTCGCA
ACTGGGAAGTTAGGGATTCTGTCGCTCTCGCCTCTATCGCTGCCGAAACATTGGTTTGGCGAATTTAGTAGCTGTCGATT
TTCGGTTCATACATTGTCCTTGTTCATTGCTTTTAATGTTAAGAGTGTGCCTTCATGCAAGAATGTGGTATGTTCTCTTG
CGTTGTCCTTTGCTTTGTGGTCGCCGTTTGGCAAGTGATTTTCTGCATGGAACCATTCTTTCATATACCAATCATATCTT
GGGTGTGGAAAGCGTGCCTAAGATATTTTTTAACTGTGTCTA-GATGTTGCTTACACTGAAATCAAATAACAGATAAACA
AGAATCTAATGCTAACCATGTAGTTTTGCATGCACTATTATATCCATTAAGTAGTTGAAAGCCGTTGCAAATTGCATCCT
GAATTGCATTTGTGCGCCAATGCCAAAGTGCTGATCACCTTCTGTTGTCGCCTGTAAATCATGTAGAGTTAATTACCCTA
TTAGTACACAAACTTGCAGTGCGGGTACAATTTCATACAACAAGTTGCAAAATGACTCATCTTGCCCCCTAAACTCGTTT
TGCGGGTTCACTGATGCACAATTCGCGTCCGCATTAGCCACGTCGGCCCCTGGTACTTGCCCACGTTTAGGATAATTTGC
AGGACCCCCCCGCTGTATGCCGTAAATAGGTCTCTAGCCCAACCATATCCCGTAGCTCTTTTGTCTTGTATCTTCGACCT
CTCTGTTTTTTCCTCAAATCCCCAGCGAAATCCGTAGACCTCTCCTCTGTTGTTACCCCAATGTCTGCGCAAGGACGGCA
CAAGGCGGCTCACCGTGACGCGACGTCCTCGCCGGCGGATCGTGGACGGATGGGCTGGGCGGCGACGTTGGTGTTCGCAC
TCGCGG
>chr3A_1
CCCGGTCGATATGCAAGATGCAACCAAACAAGAACGGTTGTGAATGGTGAGATCGCAATCACCCAGATTAACAGGATCAC
ACCACCAAACTTTCCAAACCCATGAATGATGCGGATAAGAAGACCTAGCAGCACGCCGCCGGCGCGAGGTAGTCCTTGGC
TCCGTCCTCCACCTGCGCCTGTCCGCCGAACAGGCCGGCCCTGAACAGCAGGAACCCCACCGCGTGGCCAGCGACTGCCA
CGAGGAGCACGCCGACGTTGAACGACATGAGCGCGAGCATGAGGACGTACGCCATCCCGACGCGCAGCGCGTGCACGGCG
GCGCGCGCCGCCCCCGCTGCCGCGGGCCGGTCGCGGGAGGAGAGGCGGGACTCGAGCCAGCGGGAGGAGGAGAGGCACTC
CACGAGCACGGCGAGCGCGAAGACGACGAGGAGCGCGAGCGCGTACATGCCACCGCTGGAGCCGGGCCACCCGTGGAAGA
GGATCTCCGAGTTCTTGCCCCAGTAGAAGGTCATGTGCATGTAGTGCATCTGCATGCCCCCGTGCGCCGCCGCCGCCGCC
GGGGCGGCGGCGCC---GCCCATGCCCACGCCGTGCCCTCCCATTCCCATGTCCATCGCGCGCTGGACGCCGATGATGAT
CTGGTGGCGTTCTGTGCGTTCGTTGCATCTGCGCCCGCGCCCGCGTGGGTGTATATGTGCGGGCGGGC-CGGCGCGGCGC
GGCGCCTGTGCAGTACGCATGTACGACACC-GGCAGCCAAAGGAAGTACACAGTCGTCAGACGCAGCTGTCAGTCAGATC
GTAACCACCCACGGCCCACGCGATCTTTGTG----------------------------------AGG-ATAGCGGATCC
ATTTTTCC-TCTTCTGTGGACAGGCTTTCAGATCGTGGGCCGATTAGGCTTAAGCTTGAAGGGGTTGGTTTCTCGTCTTC
---TTCTAGCCTCCCAGTGTACCGGCCCAGGCCCATCACCTCTTATCGCCCTCGCCGACGATGGCGCACAGCCTCACCGG
CGGCGCCAGCCCCTTCCGCTGCTACCCTCACCCGCCCTGCTGCGCCGCCGGACGAGCTACCCCGACCGCTCCCCCTTCCA
CCCGCCGCCGTGTGGCCGCCTCGGCCTCCCCTCCGTCGCCCCCGCCGGCCATCGAGGGCCGCGGGGTGGGATTTTCGGTG
ACGACGAGGCGGGGGGTGGTGCTGCCGGTTCTCAAGGACTGCTCACTGTGCGTCCCGCCGGGGCAGCTCTGGATGCTCCT
CGGCCCCAACGGCTGCGGCAAGTCCACCCTCCTCAAGGTCTATCTTTTCTCAACTAGTAGGACTAAGAGTCTGGTGCTTG
TTTCCACGCGCATTTTTATCGATAGACCGGCGGTAGCTGTGCTCATCAGGCAATTGACCGAAATACCGTATGCAAATGAT
CAATTCCAAGACCCATGGTTGAGT---------AGCTGGTCTGTTCTTAAAGAGAATTTTCTTCTTTAGTGTGTAGAACC
AACTCATGGAGTGAGTACGATACCACAAGCACAGTCTGGTCGTGTTTGATTCAGTTCTCATAAAATATATCTTTGGAGGA
CTAGGCAGAGTATGTGTACTTTATCAGAAATCGAAATGCTGAATGGTAGCCATTTGAATCTTTGGATTGTCCCAGC-TTT
TT-------ACCGAGATAA-GGTCTGTGAGACCTAGGAATGGCTCAGAATTTGCTGAGTTTGCGGTCATTCGAGTTGCTT
GAGAA----AAAAT-ATATCAGCCACCA-TCAGGAGCCAACAGGAAATTTAATTCGATAACTGATAGTAAATATATCCTG
TAGCATAACTACCAGGATCTTCACGTGTAAATGAGCAATCATGCATCAGATACTGTGCGTGTTGTATCAAGTACATTCGA
CCAATTGAGCACTGAACACCTGATCGACATGGTAATTTCACATTTCTCAGGATATATGTTCAACTTCAACCTCAATAAAA
ATTATGACAGAACTAGGAAGGAAGTATTCTTAGAGAAGTTGCATAATCTATTCTGGTATTGTTAGAATATA---------
---------------------------------------------------TTTTGTAAAGCAGAGTGATACAAAATTTG
GTTCTAG-ATCAGTTTATTTGCTTGCATGTT----TTTCTTTCTGCTTACATGGAATACAAAACTTTGATAGGGTTTCTT
TCTACTAGTACCTCAATGGAATGCTAACTTCTTGTTCTTTTGTAGGTTTTGGCAGGTTTTCAAAATCCATCTGCTGGTAC
AGTGCATATTAATAGGCCATTCAGCTATGTCTTCCAAAATCCTGATCACCAGGTTATCACTGGTTCTTTGATGAGTTTTT
ACCTGCAACTATGCCATAACGCATTATCAAAGTGGCTTCGAATTCATAGGATGTTTGTATTGTGGATGCTTGGGAGCTTT
GTTAGCAATGCAATCGTCCCAAATTAAATGAAGTTTTGCTGCATATTGAATTCTGTCTTTTGGATGCAGGTTGTGATGCC
CACGGTAGAATCCGATGTTGCATTTGGTCTTGGTAAGCTCAATCTTTCATTGGATGAGGTTAGGTCAAGAGTGTCACAAT
CTCTGGATGCAGTTGGAATGTTGAGCTACTCTCAAGTAGGCAGCTGACATGCACATTTTGGATTATAATCTACTATTGTC
TGCACAAGGTTCACAAACATCCTTCATCCAAAACAGAGGCCAATCCAAACTCTGAGTGGTGGGCAGAAACAGAGAGTTGC
CATTGCTGGTGCTTTAGCTGAAGCATCCAAAGTACTACTGCTGGATGAGCTGACCACATTCTTGGACGAATATGATCAGG
TATTATGATTATTCATGTTTAGTTTTTAATAAC-----------------------------------------------
--------------------------------------------------------------------------------
--ATGCACTAAGATATATGATCACGAGGTACCTTTGCTA------------GAGCAATCTTCAGTTACCATTTCATTTCG
AACTGGAACTGTAGTTTGGCAATTGCGCTAAAGCTCCCAACAGTCTGTAGTTCATTAAAATTGGTGTAGCCATGGTTC--
ATAAACACATTACGATTTTGGACTATATTACATATAATTTTCTGATGCTTCTATCGCATTTGTTGTGTTGTTGATATGCC
TTAGAAGCTATGGCTAACCTACACTGTATTATGTATGGAAAATCCTCTGTTGGTTGTTGAAAA------TATAAGAAATT
GTTATATTTTCCTGTTTCTGATAT--------------------------------------------------------
---------------------------GTAGTTATCATCCTTTTTGATTGACTGGTAGTTACCACTTAGCAGGCCTACTC
TTACCTTGTAGTTATACAGTACTTGATTGTTATGGACATTGTAATCTTGGTGATCTTGGCTTCATGAAAGTGCAGATGGG
CGTGGTCAAGGCGGTGAGGAACTCTGTAACTGCTAGTGGGGAGGTTGCGGCACTGTGGGTGACTCATCGGCTGGAAGAAC
TCAGATACGCAGATGGCGCTATTTACATGGAAGATGGCCGGACGATTATTCAAGGCGACGTCTCCAGTATATCCAGATTT
ATAAAGAGGAAACAAGCACGCTATTTTGGTCATTTTGAGCTCTGATCCTTGGGAGTCCCAAGCTGCAGGCAGAATTATCT
GCTCTTGTGTAGTACGAGTACATCACTACATCATGGTACTAGAAAACAGTTTCTTCTCTAGGGCGGTTTGTATGTTTGCA
ACTGGGAAGTTAGGGATTCTGTCGCTCTCGCCTCTATCGCTGCCGAAACATTGGTTTGGCGAATTTAGTAGCTGTCGATT
TTCGGTTCATACATTGTCCTTGTTCACTGCTTTTAATGTTAAGAGTGTGCCTTCATGCAAGAATGTGGTATGTTCTCTTG
TGTTGTCCTTTGCTTTGTG--CGCCGTTTGGCAAGTGATTTGCTGTATGGAACCATTCTTTCATATACCAATCATATCTT
GGGCGTGGAAA-CGTGCCTAGGATATTGTTTAGCTGTGTCTAGGATGTTGCTTACACTGAAATCAAATAACCAGTAAACA
AGAATCTAATGCTAACCATGTAGTTTTGCATGCACTATTATATCCATTAAGTAGTTGAAAGCCGTTGCAAATTGCATCCT
GAATTGCATTTGTGCACCAATGCCGAAGTGCTGATCACCTTCTGTCGTCGCCTGTAAATCATGTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>chr3B_1
CCCGGTCGATAGGCAAGATGCAACCAAACGAGAACGGTTGTGAATAGTGAGATCGCAATCACCCAGATTAACAGGATCAC
ACCACCAAACTTTCCAAACCCATGCATGATGCGGACAAGAAGACCTAGCAGCACGCCGCCGGCGCCAGGTAGTCCTTGGC
CCCGTCCTCCACCTGCGCCTGTCCGCCGAACAGGCCGGCCCTGAAGAGCAGGAACCCCACCGCGTGGCCGGCGACTGCCA
CGAGGAGCACGCCGACGTTGAACGACATGAGCGCGAGCATGAGGACGTAGGCCATCCCGACGCGCAGCGCGTGCACGGCG
GCGCGCGCCGCCCCCGCCGCCGCCGGCCGGTCGCGGGAGGAGATGTGGCTCTCGAGCCAGCGGCAGGTGGAGAGGAACTC
CACGAGCACGGCGAGCGCAAAGACGACGAGGAGCGCGAGCGCGTACATGCCGCCGCTGGAGCCGGGCCACCCGTGGAAGA
GGATCTCCGAGTTCTTGCCCCAGTAGAAGGTCATGTGCATGTAGTGCATCCGCATGCCCCCGTGCGCTGCCGCTGGCGCC
GGC---GCGGCGCC---GCCCATGCCCATGCCGTGCCCTCCCATTCCCTTGTCCATCGCGCGCTGGCCGCCGATGATGAT
CTGGTGGCGTTCTGTGCGTTCGTTGCATCTGCGTCCGCGCCCGCGTGGGTGTATATGTGCGGGCGGGC-CGGCGCGGCGC
GGCGCCTGTGCAGTACGCATGTACGACACC-GGCAGCGAAAGGAAGTACACAGTCGTCAGCCGCAGCTGTCAGTCAGATC
GTAACCACCCACGGCCCACGGGATCTTTGTG----------------------------------AGGGATGGCGGATCC
ATTTTTCCCTCCTCTGTGGACAGGCTTTCAGATCGTGGGCCGATTAGGTTTAAGCTTGAAGGGGTTGGTGTTTCCTC---
---TTCTAGCCGCCCAGTGTACCGGCCCAGGCCCATCATCCCTTATCGTCCTCGCCGACGATGGCGCAAAGCCTCACCGG
CGGCGCCACCCCCTTCTGCTGCTACCCTCACCCGCCCAGCTACGCCGCCGGGCGAGCTACCCCGACCGCTCCCCCTTCCA
CCCGCCGCCGCGTGGTCGCCTCGGCCTCCCCTACGCCGCCCCCGCCGGCCATCGAGGGCCGCGGGGTGGGATTTTCGGTG
ACGACGAGGCGGGGGCTGGTGCTGCCGGTGCTCAAGGACTGCTCGCTGTGCGTCCCGCCGGGGCAGCTCTGGATGCTCCT
CGGCCCCAACGGCTGCGGCAAGTCCACCCTCCTCAAGGTCTATCTTTTTCTGAACTACTAC--------TCTGGCGCTCG
TTTCCATGCGCATTTTTATCGATAGACCGGCGGTAGCTGTGCTCATCAGGCCATTGACCGAAATACCCTATGCAAATGGT
CAATTCCAAGACCCATGGTTAAGTTACTTAAGTAGCTGCTATGTTTTTAAAGTGAATTTTCTTCTTTAGTGTGTAGAACC
AACTCATGGAGTGAATACGATACCACAAGCAGAGTCTGGTCGTGTTTTATTCAGTTCTCATAGAAGATATTTTTGGAGGA
TTAGACATAGCATGCATACTTTATCAGAAATCAAAATGCTGAATGGTATTCATT-GAATCTTTGGATTGTCCCGGCTTTT
CCTTTGAGCACCAAGATAAGGGTCTGTGCGACCTAGGAATGGCTCAGAATTTTCTGAGTTTATGGTTTCTGCGAGGACAA
TCTTGCTTGAAAAAAATGTCAGCCTCCATTCAGGAACCAATAGG-AAGTTAATTTGATAGTTTATAGTAAATATATCATG
TAGCGCAAATACCAGAATCTTTACATGTAAATGAGCAATTACGCATTACATATTATGTGTGTTGTATCAAGCACATTCGA
CTATTGGTGCATTGAACACCAGATCGACATGGTAATTGCGCATTTCCAAGGATATATGTTCAACTTCAACCTGAATAAAA
ATGATAATAGAGGTAGGAAGGAAGTATTC-AAGAGAAGTTGCATAATCTATTCTGGTATTGTTACAATATACTCCCTCTG
TCCCAAAATAAGTACTAAAGTTAAGACACTTATTTTGGGACGGAGGGAGTATTTCATAAAGCAGACTGATACAAAATATG
GTTCTGA-ATCAA----------------------TTTCTCTTTGCTTACTTGGACTGCATAACTTTGATAGATTTTCTT
ACTAGTAGTACCTCAACGGGATGCTAACTTCTTGTTCTTTTTTAGGTTTTGGCAGGTTTTCAAAATCCCTCTGCTGGTAC
AGTGCATATTAATAGGCCATTCAGCTATGTCTTCCAAAATCCTGATCACCAGGTTATCACTAGTTCTTTGATGAGTTTTT
ACCTGCAATTATGCTAGAACGCATTATCA-AGTGGCATTGAATCCATAGGATGTTTGTATTGTTGATGCTTGGGAGCTTT
GTTAGCAATGCAAGCGTCCCAAATTAAACGAAGTTCTGCTGCATATTGAATTCTGTCATTTGGATGCAGGTTGTGATGCC
CACTGTGGAATCCGATGTTGCATTTGGTCCTGGTAAGCTCAATCTTTCATTGGATGAGGTTAGGTCAAGAGTGTCACAAT
CTCTGGATGCAGTTGGAATGTTGAGCTACTCTCAAGTAGGCAGCTAACATGCACATTTTGGATTATAATCTACTATTGTC
TGCACAAGGTTCACAAACATCCTTCATACAAAACAGAGGCCAATCCAAACTCTGAGTGGTGGGCAGAAACAGAGAGTTGC
CATTGCTGGTGCTTTAGCTGAAGCATCCAAAGTACTACTGCTGGATGAGCTGACCACATTCTTGGACGAATATGATCAGG
TATTAAGATTATTCATGTTTAGTTTCTAATAAGATGTACTCCCTCCGTCCGAAAATACTTGTCATCGAAATGGATAAAAA
GGGACGTATCTAGAACTAAAATACGTCTAGATACATCTCCTTTTATCCATTTTGATGACAAGTATTTCCGGACAGAGGGA
GTATGTACTAAGGTATTTGATCACGAGGTACCTTTGCTATTGTGCCAAGGAGAGCAATCTTCAGTAAGCCTTCCAATTCG
AACTGGAGTTGTAGTTTGGCAATTGTGCTAAAACTCCCAACAGTCTGTAGTTCATTAAAATTGGTGTAGCCTTGGTTCTC
ATAGACACATGAATATTTTGGACTATATTACATATAATTTTCTGATGCTTCTATTGCATTTTCTGATGGAGGGGGTA---
---------------------------------TATGTAAAATCCTCTGTTGGTTGTTGAAAAAACTGCTATCATAAATT
TGTATGTTTTCCTGTTTCTGACAT--------------------------------------------------------
---------------------------GTAGTTATCATCCTTTTTAATTGACTGGTAG-------TTAGCAGGCCTACTC
TTACCTTGTAGTTATAC-----TTGATTGTTATGGGCATTGTAATCTTGGTGATCTTGGTTTCATGGAAGTGCAGATGGG
CGTGGTCAAGGCGGTGAGGAACTCTGTGACTGCTAGTGGGGAGGTTGCGGCACTGTGGGTGACCCATCGGCTGGAAGAAC
TCAGATACGCAGATGGTGCTATCTACATGGAAGATGGCCGGACGATTATTCAAGGCGACGTCTCCAGTATATCCAGGTTT
ATAAAGAGGAAGCAAGCACGCTACTTCGGTCATTTTGAGCTCTGATCCTCGGGAGTCCCAAGCTGCGGGCAGAATTATCT
GCGCT---------CGTGTACATCACCACATCAGGGTACT-GAAAACAGTTTCTTCTCTACGGCTGTTTGTATGTAGGCA
ACCGGGAAGTTAGGGGTTCTGTCGCTCTCACCTGTATCGCTGCTGAAACATTGGTTTGGCGAAGTTAGGAGCTGTCGTGT
TTCAGTTCATACATTGTTCTTGTTCATTGCTTATAATGTT-AGAGTGTGCCTTCATGCAAGAATGTGGTATATTCTCTTG
TGCTGTCCTTTGCTTTGTGGTCGCCGTTTGGCAAGTGATTTGCTGCATGGAACCATTCTTTCATATACCAATCATATCTT
GGGCGCGGGAATCGTGCCTAGGATATTTTTTAACTGTGTCTAGGATGTTGCTTACACTGAAATCAAATAACCAGTAAACA
AGAATCTAATGCTAACCATGTAGTTTTGCATGCACTATTATATCCATTAAGTAGTTGAAAGCCGTTGCAAATTGGATCCT
GAATTGCATTTGCGCGCCAATGCCAAAGTGCTGATCAGCTTCTGTCGTCGCCTGTAAATCATGTA---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
>SNPs
------------S-------S--------------------------------S--------------------------
---------S-----------------S----------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
---------S----SSS----S--------S-------------------------------------------------
-------S-------------------------------------------------------SS---S-----S-----
-----------------------------SS---------------------------------S---------------
----------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------
---------------------------------S-----------------------------SSS-S--S-SS-SS-SS
SSS-----------------------------------------------------------------------------
-------SS-------------------SS---S-----------------------------------S----------
-------------------------S------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S--------------------S-S--------S--
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
------------------------------------------------------------------S--------S----
--------------------------------------------------------------------------------
-----------------------------------------------------S----S---------------------
---------------S---------------------------------------S----S-------------------
--------------------------------------------------------------------------------
----------S-----S----S---------------------------S------------------------------
--------------------------------------------------------------------------------
---S-S-S------S------------S---SSSS-----------S-------------------------------S-
------------------------------S-------------------------------------------------
------S-------------------------------------------------------------------S-----
----------S-----------------------------------S--S-----------------S----S-------
-----S--------S-----------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
----------------------------------------------S---------------------------------
----------------------------------------------------S---------------------------
-------------------------------------------------S------------S----------------S
------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
-----------------------------------------------------------------S----------S---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S----------------------------------------S--------------------------------------
---S-------S--------S--------------------------------------------------SSS------
--------------------------------------------------------------------------------
---------------------------------------------S-------------------SSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_951
--------------------------------------------------------------------------------
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---------------------------------------------------TAGCTTGAAGGGTGGGTTGG---------
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>reverse_2639
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------------------------------------------------------------------------------GT
CTCTGGATGCAGTTGGAA--------------------------------------------------------------
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>forward_1070
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----------CCCTTCTGCTGCTACCCTTG--------------------------------------------------
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>reverse_3253
--------------------------------------------------------------------------------
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----------------------------------------------------GTCGCATTTGTTGTGTGGTTG-------
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>forward_1429
--------------------------------------------------------------------------------
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------------------------------------------------GGCCATTGACCGAAATACAGC-----------
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>reverse_3459
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------------------ACAGAGGGAGTAGTTATCATCCT---------------------------------------
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>forward_1676
--------------------------------------------------------------------------------
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-------------------------------------------------------GAATCTTTGGACTGTCCCGGA----
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>reverse_3460
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-------------------CAGAGGGAGTAGTTATCATCCTTT-------------------------------------
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>forward_3167
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--------------------------GCTAAAGCTCCCAACAGTCTT---------------------------------
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>reverse_4656
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---------------AAATCCCCAGCGAAATCCGT---------------------------------------------
--------------------------------------------------------------------------------
------
