>input_sequence_31022
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------------------------ATGGTGAATTTCTCCAAGAAACTAACGACAGACCAGGTCCCAGGATGGGAGGAGTA
TGTGTGGAATTTCCTCA-TTTCCTGATCAACTCACA----------------------------TTTTAGTCCTGATGAA
ACATCATACGTCTGCTTTTTTCTTTCAGGTACTACTTCAACTACAAGCTGCTCAAGGCAAGGGTGAAGGTGTACACAGAG
CAGACAAAGGAAGGCAATCACGACCGAAGACGCGTTCTCAAAGATTTCTCAAAGCTGCTTGACGATGAGGTTCTAATTTA
TCGATAGTCGTATCGGCTTCACGCATCACAAATCTCCCATTTTAAGAAGATCTCATGTTATTCCCCTTTGTTT-CAGATT
GAGAAGATAGTGCTGTTCATGATCGAACAGCAAGGGCTGATAGCGGCGCGGCTCGAGGAGCTAGGGAAGCGAAGGGCGGT
GCTTGAGGACATCCCACTGCTCCAGGAGATAACTGAACTGAGAGAGGACTACAGGGCAGTCGGCCATGATCTTGTCAGGC
TTCTGAAGTTCGTCGATCTCAACGCCAACGCGGTCCGGAAGATCCTGAAGAAGTTCGATGAGCGTCTCGGGTACAAGTTC
ACGGATTATTATGTCAGGAGCAGGTCGAACCACCCCTACTCTCAGCTCCAGCAGGTTTTCAAGCATGTGGTGAGTTAATT
GGCCAACATCTTTCAGTCTTGCTACTTTCACATTTGAATCTGAACATGAATTCAACCTTATTATTATTATTATTATTATT
GCGAATCATTTCAAATTTGCCTCTGAACTTAAAATCTGAAATTTTTCCTTTTTCAACCATTTAAATTTTATAATCTTGAA
CTGTGAGTAGGGTATTGGAGCTGTTGTGGGGGCATTATCGCGCAACCTCGGCGACCTCGAGGAGCGCGAAGGAAGTTACC
TGAATATCTATGACCAGAACCCACTGGCCATTCCAAAGGTTCTTCAGTCTTGTGCTTTCTCTTTCCAGTAGAAAACCACA
AACAGAGCGTGATCGTGTTGTTCTTGTACTATGTGGCTAACAATGATAACATAATCTTGTACGTATGTGGTGGCACCTGA
AGGATCCCGTGATCGACATGATCAAGGCGACGGCGGACAAGCTGACCAACTCGACCAACTTCCTGCGGTTCCTGGGGCAG
CACGCGCTGATCAGGCAGGGGAGCATCCC---CGACTCGCCGGAGGAGCAGCAGGTGTCGGAGGACAAGTACCACTTCAT
CTCCCTGGTGCTCAACCTGGCCAACACCTTCCTCTACATGGTGAACACGTACATCGTCGTCCCCACGGCCGACGACTACG
CCACCAGCCTCGGCGCCGCCGCCACGGTCTGCGGCGTCATCATCGGCTCCATGGCCGTGGCGCAGCTCTTCTCCTCCGTC
TACTTCAGCGCCTGGTCCAACCGCTCCTACTTCCGCCCGCTGCTCTTCAGCAGCGTCGTGCTCCTCCTGGGCAACGTCAT
GTACGCCCTCGCCTACGACTTCGACTCCCTCGCCATCCTCCTCGCCGGCCGCGTGCTGTGCGGGATGGGGTCGGCGAGGG
CCGTCAACCGGAGGTACATCAGCGACTGCGTTCCGCAGAGGATCCGGATGCAGGCGTCCGCGGCGTTCGTCAGCGCCAGC
GCCCTCGGCATGGCCTGCGGCCCGGCGATCGCCGGCCTGCTCCAGGTCAACTACAAGGTGTATTCGGTCACCATCAACCA
GGACACGTTGCCTGGCTGGGTCATGGCGTTTGGCTGGCTCGCGTACCTGGTTTGGCTGTGGATCTCGTTCAAAGAGCCGG
CTCTCGGCGACGCCGACGATGAAGGTCACCGTCAGGGTTCCTCCGGCGGCTCCTCAAGATTAGGATACCGGAAGCAAGGG
CTTGCGGGTGAATACCTGCTGAAGCAGGACGCTGAGGGCGAGAGCGACCAGGAGGAGACGCCGGCTCCGGCGGCAGCGCC
GTCGATCGCCGAGGCGTACAGGCTGCTGACGCCGTCGGTGAAGGTGCAGCTGCTGATCTACTTCATGCTCAAGTTCTCCA
TGGAGATCCTGCTGTCGGAGTCGAGCGTGGTGACGAGCTACTACTTCGGGTGGAACACGAGCTCGGTTGCGGTGTTCCTG
GCGGCGCTGGGGCTGACGGTGCTCCCCATCAATGCCGTAGTGGGCACCTACATCAGCAACATGTTCGAGGACCGGCAGAT
CCTGGTGGCGTCGGAGGCGGTGCTGCTGGCGGGCGTGGCGCTGAGCTTCCACGTGCCGGGGACGGCGTACACGGCGGCGC
AGTACGTGTGCTCGGCGCTGCTGACGTTCGTGGCGGCGGAGGTGCTGGAGGGGGTGAACCTGTCGCTGCTGTCGCAGGTG
ATGCCGGCGCGGCTGTCCCGCGGCACGTGGAACGGCGGGCTGCTGTCGACCGAGGCCGGCACGCTGGCGCGGGTGGCCGC
CGACGGGACCATCACGCTGGCCGGGTACCTCGGGCAGGGGGCGCTGCTGAACGCCACGCTGCTGCCGTCGCTGCTCATCT
GCGCCGCGTCCATCGCCGCCACGCTCTCCACCTACAACTCGCTCTTCTACTAG---------------------------
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----------------------------------------
>chr5B_1_TraesCS5B01G310500
TGAATTATACTAAGCTCTTTTAGGTTGTTTGTAGTTGCTAGGAACTTGAAGTTCGTTTTCTTCTCAGATAGTCTGTTTGG
TTGCATGAGGTTGCGATGCTGGCAGGTCCGCTTATGGCCTGGCCAAGAACTCTGTTGTTTTCTTTTCTGCTTCATCAATA
AAATGGGGTAGGGGAAAAGTCCCTTTTCATTCAAAAAAAAATAAAAATCCTTCCGTGGAAAGGTAAGAGCTTGTGCCTGA
CTGTACCTCTTTTTATTGTTTTGACAGGTGCACCTGACTGTACCACC-TTTTTCAGTGTAAGATGACATTTTCTCTCCAC
CCTTGCAAAAAAGAAGTGGCTGACTTTTGTTTGTTTTCGTACCCCCAAGCACTACATTATACATTGTCAA-CCCCAGTGG
TCGATGAAAGAAGCATTTCTGAGTTTCTCCAGTGGGCTAAGACAAATCTAAGACAAGAATTTTGGGACGGAGGGAG----
--------------------------------------------------------------------------------
-------------TATATTCTTTGCAGGTCTGTAATCTGTTGCTGGTCGGTTACTTGATGGCTATTTCTCAATAGGATGA
GCACAAATAGTATGATACAATATCACAAAAGTCAGACACGGCGATCATTAGCTGGACCTGACACTAGT------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATGATTTAATCCATGGAGAAGTTAAATGGATAT--GATAGTGAAAATACATGTATATAATTATCTGCTGCCCA
GCTGTGCGTATCAAACTTGATCTCAATCTAATTTTAGCATGGATTTATTCATAACTGATTAACAATCAGTTCATCCAACG
TGCAAGAATCATTCCCTGATGGAAAGCTATATATACTGAGCACATAGTAGTAGCACACCACCCAGCAACCTTACTACCAA
GAA-----------------------CTAATCATCGGTTTCTTGTTGCATCCTGGTATGGTTCACCTCGTTGCTAAAATT
CTTTTGTTCTTATCTGAATCTTCCTTTTTTTTTTCTGACGGAAAACTGTATCGTCACACCGCCCGGTGTGCTTCTCTTAT
AGGTCCTCTTACACTGAAG-AAAAATGGTGAATTTCTCCAAGAAACTAACGACAGACCAGGTCCCAGGATGGGAGGAGTA
TGTGTGGAATTTCCTCA-TTTCCTGATCAACTCACA----------------------------TTTTAGTCCTGATGAA
ACATCATACGTCTGCTTTTTTCTTTCAGGTACTACTTCAACTACAAGCTGCTCAAGGCAAGGGTGAAGGTGTACACAGAG
CAGACAAAGGAAGGCAATCACGACCGAAGACGCGTTCTCAAAGATTTCTCAAAGCTGCTTGACGATGAGGTTCTAATTTA
TCGATAGTCGTATCGGCTTCACGCATCACAAATCTCCCATTTTAAGAAGATCTCATGTTATTCCCCTTTGTTT-CAGATT
GAGAAGATAGTGCTGTTCATGATCGAACAGCAAGGGCTGATAGCGGCGCGGCTCGAGGAGCTAGGGAAGCGAAGGGCGGT
GCTTGAGGACATCCCACTGCTCCAGGAGATAACTGAACTGAGAGAGGACTACAGGGCAGTCGGCCATGATCTTGTCAGGC
TTCTGAAGTTCGTCGATCTCAACGCCAACGCGGTCCGGAAGATCCTGAAGAAGTTCGATGAGCGTCTCGGGTACAAGTTC
ACGGATTATTATGTCAGGAGCAGGTCGAACCACCCCTACTCTCAGCTCCAGCAGGTTTTCAAGCATGTGGTGAGTTAATT
GGCCAACATCTTTCAGTCTTGCTACTTTCACATTTGAATCTGAACATGAATTCAACCTTATTATTATTATTATTATTATT
GCGAATCATTTCAAATTTGCCTCTGAACTTAAAATCTGAAATTTTTCCTTTTTCAACCATTTAAATTTTATAATCTTGAA
CTGTGAGTAGGGTATTGGAGCTGTTGTGGGGGCATTATCGCGCAACCTCGGCGACCTCGAGGAGCGCGAAGGAAGTTACC
TGAATATCTATGACCAGAACCCACTGGCCATTCCAAAGGTTCTTCAGTCTTGTGCTTTCTCTTTCCAGTAGAAAACCACA
AACAGAGCGTGATCGTGTTGTTCTTGTACTATGTGGCTAACAATGATAACATAATCTTGTACGTATGTGGTGGCACCTGA
AGGATCCCGTGATCGACATGATCAAGGCGACGGCGGACAAGCTGACCAACTCGACCAACTTCCTGCGGTTCCTGGGGCAG
CACGCGCTGATCAGGCAGGGGAGCATCCC---CGACTCGCCGGAGGAGCAGCAGGTGTCGGAGGACAAGTACCACTTCAT
CTCCCTGGTGCTCAACCTGGCCAACACCTTCCTCTACATGGTGAACACGTACATCGTCGTCCCCACGGCCGACGACTACG
CCACCAGCCTCGGCGCCGCCGCCACGGTCTGCGGCGTCATCATCGGCTCCATGGCCGTGGCGCAGCTCTTCTCCTCCGTC
TACTTCAGCGCCTGGTCCAACCGCTCCTACTTCCGCCCGCTGCTCTTCAGCAGCGTCGTGCTCCTCCTGGGCAACGTCAT
GTACGCCCTCGCCTACGACTTCGACTCCCTCGCCATCCTCCTCGCCGGCCGCGTGCTGTGCGGGATGGGGTCGGCGAGGG
CCGTCAACCGGAGGTACATCAGCGACTGCGTTCCGCAGAGGATCCGGATGCAGGCGTCCGCGGCGTTCGTCAGCGCCAGC
GCCCTCGGCATGGCCTGCGGCCCGGCGATCGCCGGCCTGCTCCAGGTCAACTACAAGGTGTATTCGGTCACCATCAACCA
GGACACGTTGCCTGGCTGGGTCATGGCGTTTGGCTGGCTCGCGTACCTGGTTTGGCTGTGGATCTCGTTCAAAGAGCCGG
CTCTCGGCGACGCCGACGATGAAGGTCACCGTCAGGGTTCCTCCGGCGGCTCCTCAAGATTAGGATACCGGAAGCAAGGG
CTTGCGGGTGAATACCTGCTGAAGCAGGACGCTGAGGGCGAGAGCGACCAGGAGGAGACGCCGGCTCCGGCGGCAGCGCC
GTCGATCGCCGAGGCGTACAGGCTGCTGACGCCGTCGGTGAAGGTGCAGCTGCTGATCTACTTCATGCTCAAGTTCTCCA
TGGAGATCCTGCTGTCGGAGTCGAGCGTGGTGACGAGCTACTACTTCGGGTGGAACACGAGCTCGGTTGCGGTGTTCCTG
GCGGCGCTGGGGCTGACGGTGCTCCCCATCAATGCCGTAGTGGGCACCTACATCAGCAACATGTTCGAGGACCGGCAGAT
CCTGGTGGCGTCGGAGGCGGTGCTGCTGGCGGGCGTGGCGCTGAGCTTCCACGTGCCGGGGACGGCGTACACGGCGGCGC
AGTACGTGTGCTCGGCGCTGCTGACGTTCGTGGCGGCGGAGGTGCTGGAGGGGGTGAACCTGTCGCTGCTGTCGCAGGTG
ATGCCGGCGCGGCTGTCCCGCGGCACGTGGAACGGCGGGCTGCTGTCGACCGAGGCCGGCACGCTGGCGCGGGTGGCCGC
CGACGGGACCATCACGCTGGCCGGGTACCTCGGGCAGGGGGCGCTGCTGAACGCCACGCTGCTGCCGTCGCTGCTCATCT
GCGCCGCGTCCATCGCCGCCACGCTCTCCACCTACAACTCGCTCTTCTACTAGCCAGCTAGAGTGCCAGGCAGCCAGCGA
GCGAGCACCTTCGTCACGGTGTGTGTTT------------TGTGTTTGTGTTGTTTCATGTTTGTGACTCGCTATGTGTA
CGCGTGTGATGCTCTGAACGTCCGATGGCTCGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCACACACACACACCCCCACACCCCA
CACACACGCTGTGCAGTTGTGTCATTGACATGTGGGCCTCCCTCGTGAGCGACACCACAGGTCCGCCTCCTCCGGCCGCC
GCTTCAGTGGAGTGGGACGACGTCTTGT-CGAATATATAGCCGCTGTTCCTCCCC--------------CTCCAGCTTGT
GGCTTGAGGCAGTCGGCTTGATCGTACAGTCAATTTTCGGATAGGCGGTCTTACGATATGGTGATCGGCTCCTGTGGAAG
GCTTTGTTGTCTTGAAGCAAGCTTTGCTATTGAAGGTTGGCGGCCATGCTCTTCTTCCTCGACGAAGATGGTGGTGCCGG
TAACTGGCGGACACTAGGATGACCCCCAACCAACATGCCACATAGACTCTATGTCATACACTACGGCCGGTTGTTTCATT
TGCTCCAAAAGTAGCACAAGTCTGTGATGGTGGTCCTCCAGTTCTAGGTTTGATACCCTCAAAAAAAAAGTTCTAGGTTT
GATGGTTTGTCCCTCTGTTTTCGACGGTGCTATACTTGCG
>chr5D_1
TGAATTATACTAAGCTCTTTTAGGCTGTTTGCAGTTGCTAGGAACTTGAAGTTCGTTTTCTTCTCTGACAGTCTATTTGG
TTGCCTGAGGTTGCGATGCTGGCAGGTCCGCTTATGGCCTGGCCAAGAACTCTGTTGTTTTCTTTTCTGCTTCATCAATA
AAATGTGGTAGGGGAAAAAG-CCTTTTCATTCAAAAAAAAAAAAAG---CTTCCGTGGAAAGGTAAGAGCTTGTGCCTGA
CTGTACCTCTTTTTATTGTTTTGACAGGTGCACCTGACTGTACCATTTTTTTTCGGTGTAAGATGACATTTTCTCTCCAC
CCTTGCAAAAAAGAAGTGGCTGACTTTTGTTTATTTTCGTACCCCAAAGCACTACATTATGGATTGTCAA-CCCCAATGG
TCGATGAAAGAAACATTTCTAAGTTTCTCACACAAAA--AAAAGAGAAAAAAATGGTTCTGTTGTCAACTCCACCAAATT
ATAGATGCATGTGGACAGGCGCCATGTAGATGTAGTAGTCCTGGACATTATGTATGTAGAAAAAAGAAAACTAAATGGAA
TATGTATTTAATCTATATTCTTTGCAGGTGTGTAATCTGTTGCTGGTCCGTTAGTTGATGGCTATTTCTCAATAGGATGA
GCACAGATAGTATGATACAATATCACAAAAGTCAGACACGGCGATCATTAGCTGGACCTGACACTACC------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------ATGATTTAATCCATGGAGAAGTTAAATGGATATATGATAGTGAAAAATACATATAA-AATTATCTGCTGCCCA
GCTGTGCGTATCAAACTTGATCTCCATCTAATGTTAGCATGGATTTGTTCAGCACCGATTAATAATCAGTTCATCCAACG
TGCTGGAATCATTCCCTGATGGAAAGCTATATATACTGAGCACATAGTAGTAGCACACCACCCAGCAACCTTACTACCAA
GAA-----------------------CTAATCATCGGTTTCTTGTTGCATCCTGGTATGGTTCACCTCGTTGCTAAAATT
CTTTTGTTCTTATCTGAATCTTCCTTTT--TTTTCTGACGGAAAACTGTATCGTCGCATCGACCGGTGTGCTTCTCCTAT
AGGTCCATATAGACCGAGCAAAAAATGGTGAACTTCTCCAAGAAACTAACAACAGACCAGGTTCCAGGATGGGAGGAGTA
CGTGA--AATTTCCTCACTTTTTTGGTCAACTAGACTCTGCTCATCTGTTGTTCTACTCTGTTTTGTCAGTCCTGATGAA
ACATCATCTGTCTGCTTGTTTCTTTCAGGTACTACTTCAACTACAAATTGCTCAAGGCAAGAGTGAAGGTGTACACGGTG
CAGACAAAGCAAGGCAATCACGACCGAAGACGTGTTCTGAAGGATTTCTCAAAGCTGCTTGATGATGAGGTTCCAACTTC
TCGGCAGTCCAATCGGCTTCACGCGCCATGAATCTCTCATTTTAAGATGATCTCATGTCGTTCCCCTTTGTTT-CAGATT
GAGAAGATAGTGCTGTTCATGATAGAACAGCAAGGGCTGATCGCGGCGCGTCTCGAGGAGCTAGGGAAGCGAAGGGCGGT
GCTTGAGGACATCCCACTGCTCCAGGAGATAACTGAACTGAGGGAGGACTACAGGGCAGTCGGCCATGATCTTGTCAGGC
TTCTGAGGTTCGTCGATCTCAATGCCAACGCGGTCCGGAAGATCCTCAAGAAGTTCGATGAGCGTCTAGGGTATAAGTTC
ACCGATTACTATGTCAGGAGCAGATCCAACCACCCCTACTCTCAGCTCCAGCAGGTTTTCAAGCATGTGGTGAGTTAATT
GGCCAACATCTTTCGGGCTTGCTACTTTCACATTTCAATCTGAAGATGAATTCAACC-----------------------
-------ATTTCAAATTTGTCTGTGAACTTAAAATCTGAAAA-TTTCTTGTTACAACCATTTAGATTTTATAAACTTGAA
CTATGAGTAGGGTATTGGAGCCGTTGTGGGGGCATTGTCTCGCAACCTCGGCGACCTCGAGGAGCGTGAAGGAAGTTATC
TGAATATCTATGACCAGAACCCACTGGCCATTCCAAAGGTTCTTCAGTCTTGTGCTTTCTCTTTTCAGT-----------
--------GTCATCGTGTTGTTCTTA---TATGTGGCTAAAAATGATAAAATCTT-------GTATGTGGTGGCACCTGA
AGGACCCCATAATCGACATGATCAAGGCGACGGCGGACAAGCTGACCAACTCGACCAACTTCCTGCGGTTCCTGGGGCAG
CACGCGCTGATCAGGCAGGGGAGCATCGCCGACGACTCGCCGGAGGAGCAGCAGGTGTCGGAGGACAAGTACCACTTCAT
CTCCCTGGTGCTCAACCTGGCCAACACCTTCCTCTACATGGTGAACACGTACATCGTCGTCCCCACGGCCGACGACTACG
CCACCAGCCTCGGCGCCGCCGCCACGGTCTGCGGCGTCATCATCGGCTCCATGGCCGTGGCGCAGCTCTTCTCCTCCGTC
TACTTCAGCGCCTGGTCCAACCGCTCCTACTTCCGCCCGCTGCTCTTCAGCAGCGTCGTGCTCCTCCTCGGCAACGTCAT
GTACGCCCTCGCCTACGACCTCGACTCCCTCGCCATCCTCCTCGCCGGCCGCGTGCTGTGCGGGATGGGGTCGGCGAGGG
CCGTCAACCGGAGGTACATCAGCGACTGCGTTCCGCAGAGGATCCGGATGCAGGCGTCCGCGGCGTTCGTCAGCGCCAGC
GCCCTCGGCATGGCCTGCGGCCCGGCGATCGCCGGCCTGCTCCAGGTCAACTACAGGGTGTATGCGGTCACCATCAACCA
GGACACCTTGCCTGGCTGGGTCATGGCGTTTGGCTGGCTCGCGTACCTGGTCTGGCTGTGGATCTCGTTCAAAGAGCCGG
TTCTCGGCGACGCCGACGAAGAAGGTCGCCGTCAGGGCTCCTCTGGCGGCTCCTCCAGCTTAGGATACCGGAAGCAAGGG
CTTGCGGGTGAATACCTGCTGAAGCAGGACGCTCAGGGCGAGAGCGACCAGGAGGAGACGCCGGCTCCGGCGGCGGCGCC
GTCGATCGGCGAGGCGTACGGGCTGCTGACGCCGTCGGTGAAGGTGCAGCTGCTGATCTACTTCATGCTCAAGTTCTCCA
TGGAGATTCTGCTGTCGGAGTCGAGCGTGGTGACGAGCTACTACTTCGGGTGGAACACGAGCTCGGTGGCGGTGTTCCTG
GCGGCGCTGGGGCTGACGGTGCTCCCCATCAACGCCGTGGTGGGCACCTACATCAGCAACATGTTCGAGGACCGGCAGAT
CCTGGTGGCGTCGGAGGCGGTGCTGCTGGCGGGCGTGGCGCTGAGCTTCCACGTGCCGGGGACGGCGTACACGGCGGCGC
AGTACGTGTGCTCGGCGCTGCTGACGTTCGTGGCGGCGGAGGTGCTGGAGGGGGTGAACCTGTCGCTGCTGTCGCAGGTG
ATGCCGGCGCGGCTGTCCCGCGGGACGTGGAACGGCGGGCTGCTGTCGACCGAGGCCGGCACGCTGGCGCGGGTGGCCGC
CGACGGGACCATCACGCTGGCCGGGTACCTGGGGCAGGGGGCGCTGCTGAACGCCACGCTGCTGCCGTCGCTGCTCATCT
GCGCCGCGTCCATCGCCGCCACGCTCTCCACCTACAACTCGCTCTTCTACTAGCCAGCCAG----------------CGA
GCGAGCGCCTCCGTCACGGTGTCACGGTGTGTGTTTTGTGTTGTGT------------TGTTTGTGACTCGCGAGGTGTG
GGCGTGTGCTGCTCGGAACGTGGGATGGCTCGGGGCACACGGCAAACCAATTGGACGGTGCGTCAGGTTGGATCCATTTC
GCAGCGATTTGTGAGGATAAGAGTTCCCCCTCCCTCCCTCCCTCCCTCCCTCG---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------CCACGGGCCCGCCTCCTCCGGCCGCC
GCTTCAGTGGAG-GGGACGACGTCTCGTGCGAATATATCACCGCTGTTCTCCCCCTCCCTCTCCCTCGCCTCCAGCTTGT
GGCTTGGGGCAGTCGGCTCGATCGTATAGTCGATTTTCGGATAGGCGGTCTTAGGATATGGTGATCGGCTCCTGCAGAAG
GC-TTGTTGTCTTGAAGCGAGCTTCACTGTTGAAGGTTGGCGGCCGTGCTCTTCTTCCTCGATGAAGATGGCGGTGCCGG
TAATTGGCGGACACTCGGATGATCCCCAACCGACATGCCACATAGACTCAATGTTGTACACTATGGCGGGTTGTTTCATC
CGCTCGAAAAGTA----------GTGATGGTGCTCCTCCAGTTCTAGGTTTGAT--------------------------
----------------------------------------
>chr5A_3
--AATTATAGTAAACTCTTTTAGGCTATTTGCAGTTACTAGAAACTTGAAGTTCGTTTTCTTCTCAGACGGTTTGTTTGG
TTGCCTGAGGTTGCGATGCTGGCAGGTCCGCTTATGGCCTGGCCAAGAACTCTGTTGTTTTCTTTTCTGCTTCATCAATA
AAATGGGGTAGGGGGGAG--CCCTTTTCATTAAAAAAAAA---------CTTCCGTGGAAAGGTAAGAGCTTGTGCCTGA
CTGTAGCTCTGTTTATTGTTTTGACAGGTGCACCTGACTGTACCAC-TTTTTTCAGTGTAAGATGACATTTTCTCTCCAC
CCTTGCAAAAAAGAAGTGTCTGACTTTTATTTGTTTGCGTACCCCGAAGCACTGCATTATGAATTGTCAATCCCCAATGG
TCGATGAAAGAAACATTTATGAGTCTCTCATAAAAAAGTAAAAGAGAAAAAAATGGTTCTGTTGTCAACTCCACCAAATT
ACAGATGCATGCGGATAGGCTCCATGTAGATGTAGTAGTCTTCGACATTATGTATGTAGCAAAA-GAAAACTAAATGGAA
TATGTATTTGAACTATATTCTTTGCAGGTGTGTAGTCTGTTGCTGGTCGGTTAGTAGATGGCTATTTCTCAATAGGATGA
GCACAAATAGTATGATACAATATCACAAAAGTCAGACACGGCGATCATTAGCTGGACCTGACACTAGTACTTTCTCCGTT
TCACAATGTAGCGCATATATATTTTTCTAAAAGTCAAACTTTGTAAAATTTGACCAAGTTTGTAGAGAAAATCATATACA
TCTAGAATACCAAATACATGTGCTTAGATACATCACAAGACATACTTTCATATTATATACATTTGGTATTGTAGATATAA
ATAATTTTCTCTATAAACTTGGTCAAAGTTTATAAAGTTTGACTTTGTAGAAAATCTAAATGCGCTATATTATGGAACGG
AGGGAGTATGATTTAATTCATGGAGAAGTTAAATGGATAT--GATAGTGAAAAATACATATGC-AATTGTCTGCTGTCCA
GCTGTGCGTATCAAACTTGATCTCCATCTTGTTTTAGCATGGATTTATTCAGCACTGGTTAATAATCAGTTCTTCCAACG
TGCTGGAATCATTCCCCGATGGAAAGCTATATATACTGAGCACATACTAGTAGCACACCACCCATCCATCTTACTACCAA
GAATCTGCCTGGGAGGAGCCCAAGAACTAATCATCAGCTTCTTGTTGCATCCTGGTATGGTTCACCTCATTGCTAAAATT
CTTTTGTTCTTATCTGAATCTTCTTTTT--T---CTGACGGAAAACCGTATCGTCGCACCACCCGGTGTGCTCGTCTTAT
AGGTCATCTTACACTGTAG-AAGAATGGTGAATTTCTCCAAGAAACTAACGACAGACCAGATTCCGGGATGGGAGGAGTA
TGTGTGGAATTTCCTCA-TTTTCTGATCAACTAGGATTGCCTCCTCTGTTGTTCTACTCTGTTTTTTCAGTCCTGATGAA
ACATCACATGTCTGCTTGTTTCTTTCAGGTACTACTTCAACTACAAATTGCTCAAGGCAAGAGTGAAGGTGTACACGGAG
CAGACGAAGGAAGGCAATCACGACCGAAGACGTGTTCTGAAAGATTTCTCAAAGTTGCTCGACGATGAGGTTCCAACTTC
TCGATAGCCCAATCGGCTTCACGCGTCATGAATCTCTCATTAT-AGATGATCTCATGTCGTTCCCCTTTCTTTTCAGATT
GAGAAGATAGTGTTGTTCATGATAGAACAGCAAGGGCTGATGGCGTCGCGGCTCGAGGAGCTAGGGAAGCGAAGGGCGGT
GCTCGAGGACATTCCACTGCTACAGGAGATAACTGAACTGAGGGAGGACTACAGGGCAGTCGGCCATGATCTTGTCAGGC
TTCTGAAGTTCGTCGATCTCAACGCGAACGCGGTTCGGAAGATCCTGAAGAAGTTCGATGAGCGTCTCGGGTATAAGTTC
ACGGATTACTATGTCAGGAGCAGATCCAACCACCCCTACTCTCAGCTCCAGCAGTTTTTCAAGCATGTGGTGAGT----T
GGCCAACATATATCTGGTTTCAAAATTGAAAATTCTGAACTTGAAGTTC-------------------------------
--------------------------------------AAAATTATTTTCATTCGAGCATTTGAATTTTAGATCCTTGAA
CTGTGAGTAGGGTATTGGAGCTGTGGTGGGGGCATTGTCTCGCAACCTCGGCGATCTCGAGGAGCGCGAAGGAAGTTACC
TGAATATCTATGACCAGAACCCACTGGCCATTCCAAAGGTTCTTCAGTCTTGCGCTTTCTCTTTTCAGTAGAAATCCACA
AACAAACTGTGATCGTGTTGTTCTTA---TATGTGGCTAAAAATGATAAAATCTT-------GTATGTGGTGGCACCTGA
AGGACCCCATAATCGACATGATCAAGGCGACGGCGGACAAGCTGACCAACTCGACCAACTTCCTGCGGTTCCTGGGGCAG
CACGCGCTGATCAGGCAGGGGAGCATCCC---CGACTCGCCGGAGGAGCAGCAAGTGTCGGAGGACAAGTACCACTTCAT
CTCCCTGGTGCTCAACCTGGCCAACACCTTCCTCTACATGGTGAACACGTACATCGTCGTCCCCACGGCCGACGACTACG
CCACCAGCCTCGGCGCCGCCGCCACGGTCTGCGGCGTCATCATCGGCTCCATGGCCGTGGCGCAGCTCTTCTCCTCGGTC
TACTTCAGCGCCTGGTCCAACCGCTCCTACTTCCGCCCGCTGCTCTTCAGCAGCGTCGTGCTCCTCCTCGGCAACGTCAT
GTACGCCCTCGCCTACGACTTCGACTCCCTCGCCATCCTCCTCGCCGGCCGCGTCCTGTGCGGGATGGGGTCGGCGAGGG
CCGTCAACCGGAGGTACATCAGCGACTGCGTTCCGCAGAGGATCCGGATGCAGGCTTCCGCGGCGTTCGTCAGCGCCAGC
GCCCTCGGCATGGCCTGCGGCCCGGCGATCGCCGGCCTGCTCCAGGTCAACTACAAGGTGTATTCGGTCACCATCAACCA
GGACACCTTGCCTGGCTGGGTCATGGCTCTTGGCTGGCTCGCGTACCTGGTCTGGCTGTGGATCTCGTTCAGAGAGCCGG
TTCTCGGTGACGCCGACGAGGAAGGTCACCGCCAGGGCTCCTCTCGTGGCTCCTCCAGCTTAGGATACCGGAAGCATGGG
CTTGCGGGTGAGTATCTGCTGAAGCAGGACGCCCAGGGCGAGAGCGACCAGGAGGAGACGCCGGCTCCGGCGGCAGCGCC
GTCGATCGCCGAGGCGTACAGGCTGCTGACGCCGTCGGTGAAGGTGCAGCTGCTGATCTACTTCATGCTCAAGTTCTCCA
TGGAGGTCCTGCTGTCGGAGTCCAGCGTGGTGACGAGCTACTACTTCGGGTGGAACACGAGCTCGGTGGCGGTGTTCCTG
GCGGCGCTGGGTCTCACCGTGCTCCCCATCAACGCTGTGGTGGGCACCTACATCAGCAACATGTTCGAGGACCGGCAGAT
CCTGGTGGCGTCGGAGGCGGTGCTGCTGGCGGGCGTGGCGCTGAGCTTCCACGTGCCGGGCACGGCGTACACGGCGGCGC
AGTACGTGTGCTCGGCGCTGCTGACGTTCGTGGCGGCGGAGGTGCTGGAGGGGGTGAACCTGTCGCTGCTGTCGCAGGTG
ATGCCGGCGCGGCTGTCCCGCGGGACGTGGAACGGCGGGCTGCTGTCGACCGAGGCCGGCACGCTGGCGCGGGTGGCCGC
CGACGGGACCATCACGCTGGCCGGGTACCTGGGGCAGGGGGCGCTGCTGAACGCCACGCTGCTGCCGTCGCTGCTCATCT
GCGCCGCGTCCATCGCCGCCACGCTCTCCACCTACAACTCGCTCTTCTACTAGCCAGCCAGCCAGC----CAACCAGCGA
GCGAGCGCCTTCGTCACGGTGTGTGTTT------------TTGTGT------------TGTTTGT---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
------------------------S------S------------------------------------S-----------
----S---------------------------------------------------------------------------
------------------SS---------------------S---SSSS-------------------------------
----------------------------------------------S---------------------------------
---------------------------------------------S--------------SS--------------S---
------------S----------------SSSSSSSSSS-S-SS-SSSS--S-SSSSSS-S---SS-SSSSSSSSS----
--------------------------------------------------------------------------------
-----------------------------S-----------------------S--------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------SSSSSSSSS-S----------------
------------------------S--------------------------SS---------S-----------------
---SS---------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------SS-------------------------S------------------------
--------------------------------------------------------------S-----------------
---------------------S----------SSS--------------------------------S------------
--------S--------S----------------------------SS-------------S--------------S---
--------------------------------S-----S----------------------------------S--S--S
---------SS-------------S---SS------S----------S----------SS--------------------
-----------------------S-----------------S--------------------------------------
------------------------------------------S-------------------------------------
-------------------------------------------------------------------------S------
--------S--------------S--S-----------------------------------------------------
--------------S-S------------------S--------S------------SSSSSSSSSSSSSSSSSSSSSSS
SSSSSSS------------S--S------------------S-----S-S-----------------------S------
------------------------------------S--S----------------------------------------
----------------------------------------------------------------S---------S-----
----S-SS-----------------SSSS-----------S--------S--SS-SSSSSSS------------------
----S---S-S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------------------------------------S----------------------------
S------------------S-----------------S-----S-----------S--S---------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------S-----S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
------------------------------S-------------------------------------------------
----------------------------------------------------------S--SSS--SSSS--S-------
------S----------------------------------SSSS-SSSSSSSSSSSS--------------S-S----S
S-------S-----S------SS-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----S--S------------------
------------S------------S------------SS---------SS-----------------------------
------S-----------S-------S----S---------------------S--------------------SS----
--S---------------S-----SS--S----------------S----------------S--------S--------
---S-----------S------S--------S-----------------S----SS-------S---S-----------S
S----S-------SSSSSSSSSS---------S---------------------SSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_287
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---------------------------GTGCACCTGACTGTACCACC---------------------------------
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>reverse_2458
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---------------------------------------------------------TGTACGTATGTGGTGGCACC---
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>forward_1710
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----------TATCGGCTTCACGCATCACA--------------------------------------------------
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>reverse_3244
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-------------------------------------------CGGCGGCTCCTCAAGATTAG-----------------
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>forward_3127
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-------------------------------------------------------------------TCACCATCAACCA
GGACACG-------------------------------------------------------------------------
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>reverse_4968
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-------TGTCCCTCTGTTTTCGACGG-------------
