>input_sequence_31019
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---------------------------------------------------------------ATGACTTCTCCCTCCTT
GCCTCCTCCTCCTCCTCCTC---TTCTTCTTCCCACCCACACAGACACAGGCAACACAAGGTTTTTCCTCCCC-------
TCTCAACTACCCAACACGCTTCTCGCCGATTTCATTTCACGACATTTTCCTCCCGATCTTCATGCCAAAGCTTCTCGCCA
TCGCCATCTTGCCGTTTATTTT-GGTCGTAGCCAAGCACTGAATCTTCAACGCGCTTGCCGT---TTATTTTGCAGAGCG
GCGAGGGAGGAGAAGGAAGAGGAGCGGGAGATGGCGGGCTGCGGTGAAGCCAAGACATCATCGGTTTCCATGGATGAAGA
GGTAAGCTCCCCATAGCCTCTGT--ATTGTCTGCCGGCGGAACAGTGATGCATGATCGATGATTACAATTTTCAAGTTCT
TCTTTCGGTAGTCTCCGACATCCCTGCGACTTGCTTGCAATGGTTTCCTTGGCTGAGCCTTCTGA---ATTATGGGAGAC
CTGTACTAGTTGG-----------TAACTTGGTAGAGAGATGGGTGGACTGAGTAATACGTTTAGATATTGGCTGTACAT
GAACGCCATTGATGCATAACAGAGAAAGCTTGGGAGTTTCAACTAACGCAAA-------------------TTAGGAAGC
TGTTCTCAGTCAGTATTATCCCCCTGTGCCCTGTCCCTGTCCGGCCTACCTCTCTGACATAGATATGCAGAGTAAGCCCG
TCAACTATCTCTGTTCTCCCATGAGCGTGTCACCTGTTTGGCTATGTAATTTCTCCTTTTTTCTGGC-------------
---------------AGCCACTAAACAAAATGGTTAGCTTGTCAGTTTCCTCATACTAAAAAGT----------------
-----------------TATTTGGGTGCATCTTAAGTTGGAACTTGAGTGTACTAGAAGCGCTTTTAATCCACAAAACTG
CGGTTTTAACCATTGAGAGCAAGTTCCTAGAGCGCATCCCATTGCCTAACGCGCTCGCGCTCCTTAATGAAGAAGACGCT
CTTATCCTCTGCACCCACTTAGCAAACCTGCAATGTCCTAATCTGAGTA-----TTAAAGATGGATTCTGCACCATCGGT
TACCGCAAGTGCATCTATAGGTTACGTGCAACCATTCCAGATTGCTCCTACTGACACCACGCGCACCAACATTTGCTAAC
GACGTACCGTACCAGCAAGGGACTATGAAGGG----------------CTACGCAGTCTCATGTCTGCGTGCGACTCAAG
AATCTATTGACCGATCAAAAGGCTGTGAAGGAAAC-AAAGGTGATGTGCGTGCGCGTCCATGATGGCTGACGGGCCACCG
CTTGTCTGCGCACGCTGCTGCTGTCACACTTTCACTGACCGCCACACTGGCACTGCCCAAGCAAGAATCTCCCACCTGGC
CTGCCTGCGTCACCTCTGCAGCCAGCTC-------------CATGAGCTAGCTACGTAGTA------GAGTACGAACGAA
CAAACACCTGTGCTGTGGTACCTTCCCGTGTCAGCAGCAGTTCACCACGGCGCCAACAAGTCGACACGGCGGCGGCAACG
ACCCCTCCGG--TCAGGATCGATCGGAGTCGGACCCTTTGCGTCGCTATCGTGGGCTCTGTTGGGGGATCGCCATCGCTA
GATCGCTCACATGTTTTTAGCGCCTTCTCGTGGATCGGAGGCGACCACGTCGATTGCCATGATTTTGCTGCCGGCTTGGC
GCCCTCCTGTCCGGTGGCCGCGAAAAGTGGGTTCGTCGTGAACGCTGCCGCTTTTGGCCAAATCTTTCGGCCGTCCGTCG
GTTTCGGCCGACTGATGCCGGCCGGGGACATGGCTGGGTGCGTGTATGATGCACGCCGTCGCGTCGGTC-----------
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------------------------------------------------GGGATAATTGTCTGTCCGTGTCATGTACCCTG
AGCAGACGGATAAGCCTGCGTGCATGC-----------------------------------------------------
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----------------------ATGCGTCTTTCTTGCGTCCGTCCAGGGAAGCTAGCCGAGTGTGTCGCGGAGCTTTGGA
ACCTGATCCCGTAGCTTTTTCCCTCGCGTTTGGCGGAGGCCCTGTCTCTGCTCGGTCTCGGATA--TTTATTTTCTTCTG
ATACTGATACAGTGTCTTGTTCTTCTTCAGGCATGCGGCTTGGAGAAGAAGAAGTTTGGCGGGATGGCGCCCAAGAAGCC
TCTCATATCAAAGGTAACAGCGCTAGCTAG-----------TAAATATAGGCACTGTCAA-----GCATGGAATATCTAT
GGGTCTCTAGAAGAAGA-----------CGTTTCCTTGATTTGGTCTGGTTGCATG-----CTAATGCTAACAATGCAGG
ACCATGAGCGTGCCTACTTCGACTCCGCAGATTGGGTCCTTGGCAAGGTCAGACAACACAACACAACACAACAACTTCTC
TCACTTACTTATTCAGCCATGAAAAATCTTCATTCAGAATTGCATCTGACCATGCATGCTTACTCGATCTCCTGCCATTT
TCTCCAGCAAGCTGCAAACAGCAGCTCAACGGCTGCAGTCGAATCGCTCAAGCCCAAGCTCAAGGTCAGTACAACAGCGG
GAAGCTTCAGCCCAGCTGAACGATACTGTCAGTCAGGTCTATTTAGAAACAATAACTGATGCTATTTTTTTTTCTGCT--
-TTCTTCAGAGAACTCCTCATCCCCAGCTTCCCCCTCGCAAGCCCACCTGTGCGTCTGGCTGA-----------------
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>chr4A_1_TraesCS4A01G119000
GCACATTTTAGTTTTTATGTTCGAAAACTTTTATCGTTTGACTTTAATTCAAATTTGAATTCGAATAGGATTCGAACTAA
CACGAGGTTAGCAACAGTAACCGAGGTGACGTGGCATCGTTAACGCGGGATTACTGTAGTCTAATTATCCGGGCGTCACA
CTTTGCTCGGCAGTGTTTGCCGACCGCGGGAGGAGGTGGCCGCGGCAGTGCTGCCTGGGGTGCTCGCGCGAGCCGCCTCT
TGCAGACGACACATGGGCTT--GATCCGGGTTTTTTGGGGAGCAACACTCGGACTTTCTACCCATCCAATTTCATTCCTT
TGCAGATTAGAAGTGTATGTTGCCAATGTATAGGG-GCGTTTCAAACAAACGAATTATGTGGTTCCATA-----------
---------------------GGGCACTACTGATATCTAGAAGCTTTTTGGGACGCAGGGGTGACTTATTCCTGTCCGCT
AATTAGACCCACCTCACACACACCAAGATTTTGCACGACGTGTCCCACTCACATCTTCTTGTCACATTGATTGGATTTGG
CTTGACCTCACGTGTTTCTCGCCAAACCACTATTATTATTATTAACAAACCCTAGCTACACGCTACTGTTTAGCTGCATG
TATAAAGCGCGGCCTTTTATGGTTGGAAAACAAGCGCAAAATCAGTAGGAGCAACACAGGCATCACACGAACTGTACGCA
GCGCCAGCAGAAATTGAGGTCATGCCACGCAGCAAGCAAAGAAAA-TAAATGTTTCATGAAATAAGTACTTATATTTTAA
AGAAAATAAGAACAATATACGTATAT-------------------GTCTAACTAAAACACGAGCATTGCTATACACTGCT
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-------------------GTATGTAC-----------------------------CAGAGCAGAGAGGATGATCCCGCA
GGCTAGTTAAACGAGACGAGAGTCATGCATTTTGTAGCATGCGGTAGGCATGTATGTGATGTCCGTTGCGTTGTGCACCA
GGTCTTTGTGGTTCTCACGCGTGCGACCTCTATATATATCGCCTCGCCCCTCTCTGCTCGCACATGACTTCTCCCTCCTT
GCCTCCTCCTCCTCCTCCTC---TTCTTCTTCCCACCCACACAGACACAGGCAACACAAGGTTTTTCCTCCCC-------
TCTCAACTACCCAACACGCTTCTCGCCGATTTCATTTCACGACATTTTCCTCCCGATCTTCATGCCAAAGCTTCTCGCCA
TCGCCATCTTGCCGTTTATTTT-GGTCGTAGCCAAGCACTGAATCTTCAACGCGCTTGCCGT---TTATTTTGCAGAGCG
GCGAGGGAGGAGAAGGAAGAGGAGCGGGAGATGGCGGGCTGCGGTGAAGCCAAGACATCATCGGTTTCCATGGATGAAGA
GGTAAGCTCCCCATAGCCTCTGT--ATTGTCTGCCGGCGGAACAGTGATGCATGATCGATGATTACAATTTTCAAGTTCT
TCTTTCGGTAGTCTCCGACATCCCTGCGACTTGCTTGCAATGGTTTCCTTGGCTGAGCCTTCTGA---ATTATGGGAGAC
CTGTACTAGTTGG-----------TAACTTGGTAGAGAGATGGGTGGACTGAGTAATACGTTTAGATATTGGCTGTACAT
GAACGCCATTGATGCATAACAGAGAAAGCTTGGGAGTTTCAACTAACGCAAA-------------------TTAGGAAGC
TGTTCTCAGTCAGTATTATCCCCCTGTGCCCTGTCCCTGTCCGGCCTACCTCTCTGACATAGATATGCAGAGTAAGCCCG
TCAACTATCTCTGTTCTCCCATGAGCGTGTCACCTGTTTGGCTATGTAATTTCTCCTTTTTTCTGGC-------------
---------------AGCCACTAAACAAAATGGTTAGCTTGTCAGTTTCCTCATACTAAAAAGT----------------
-----------------TATTTGGGTGCATCTTAAGTTGGAACTTGAGTGTACTAGAAGCGCTTTTAATCCACAAAACTG
CGGTTTTAACCATTGAGAGCAAGTTCCTAGAGCGCATCCCATTGCCTAACGCGCTCGCGCTCCTTAATGAAGAAGACGCT
CTTATCCTCTGCACCCACTTAGCAAACCTGCAATGTCCTAATCTGAGTA-----TTAAAGATGGATTCTGCACCATCGGT
TACCGCAAGTGCATCTATAGGTTACGTGCAACCATTCCAGATTGCTCCTACTGACACCACGCGCACCAACATTTGCTAAC
GACGTACCGTACCAGCAAGGGACTATGAAGGG----------------CTACGCAGTCTCATGTCTGCGTGCGACTCAAG
AATCTATTGACCGATCAAAAGGCTGTGAAGGAAAC-AAAGGTGATGTGCGTGCGCGTCCATGATGGCTGACGGGCCACCG
CTTGTCTGCGCACGCTGCTGCTGTCACACTTTCACTGACCGCCACACTGGCACTGCCCAAGCAAGAATCTCCCACCTGGC
CTGCCTGCGTCACCTCTGCAGCCAGCTC-------------CATGAGCTAGCTACGTAGTA------GAGTACGAACGAA
CAAACACCTGTGCTGTGGTACCTTCCCGTGTCAGCAGCAGTTCACCACGGCGCCAACAAGTCGACACGGCGGCGGCAACG
ACCCCTCCGG--TCAGGATCGATCGGAGTCGGACCCTTTGCGTCGCTATCGTGGGCTCTGTTGGGGGATCGCCATCGCTA
GATCGCTCACATGTTTTTAGCGCCTTCTCGTGGATCGGAGGCGACCACGTCGATTGCCATGATTTTGCTGCCGGCTTGGC
GCCCTCCTGTCCGGTGGCCGCGAAAAGTGGGTTCGTCGTGAACGCTGCCGCTTTTGGCCAAATCTTTCGGCCGTCCGTCG
GTTTCGGCCGACTGATGCCGGCCGGGGACATGGCTGGGTGCGTGTATGATGCACGCCGTCGCGTCGGTC-----------
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------------------------------------------------GGGATAATTGTCTGTCCGTGTCATGTACCCTG
AGCAGACGGATAAGCCTGCGTGCATGC-----------------------------------------------------
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----------------------ATGCGTCTTTCTTGCGTCCGTCCAGGGAAGCTAGCCGAGTGTGTCGCGGAGCTTTGGA
ACCTGATCCCGTAGCTTTTTCCCTCGCGTTTGGCGGAGGCCCTGTCTCTGCTCGGTCTCGGATA--TTTATTTTCTTCTG
ATACTGATACAGTGTCTTGTTCTTCTTCAGGCATGCGGCTTGGAGAAGAAGAAGTTTGGCGGGATGGCGCCCAAGAAGCC
TCTCATATCAAAGGTAACAGCGCTAGCTAG-----------TAAATATAGGCACTGTCAA-----GCATGGAATATCTAT
GGGTCTCTAGAAGAAGA-----------CGTTTCCTTGATTTGGTCTGGTTGCATG-----CTAATGCTAACAATGCAGG
ACCATGAGCGTGCCTACTTCGACTCCGCAGATTGGGTCCTTGGCAAGGTCAGACAACACAACACAACACAACAACTTCTC
TCACTTACTTATTCAGCCATGAAAAATCTTCATTCAGAATTGCATCTGACCATGCATGCTTACTCGATCTCCTGCCATTT
TCTCCAGCAAGCTGCAAACAGCAGCTCAACGGCTGCAGTCGAATCGCTCAAGCCCAAGCTCAAGGTCAGTACAACAGCGG
GAAGCTTCAGCCCAGCTGAACGATACTGTCAGTCAGGTCTATTTAGAAACAATAACTGATGCTATTTTTTTTTCTGCT--
-TTCTTCAGAGAACTCCTCATCCCCAGCTTCCCCCTCGCAAGCCCACCTGTGCGTCTGGCTGAGACATGAGGTAAGAGGA
AGAAGCCTCAAAGTCGCAGGATTTTTCGCATTGCAGATTCACCTACGTGACAGTTGTTGCTTCTTGTGGTGCGTTGCAGG
GGTCACAATGCAGCAGCAA---CCAGCAGGTGAAGAGCTCGTAGGGAGGAGAGGAGTGAGCTCGGATTAATGTTGTTTAG
CTGCTCCTGAATTCGTACTGTAGGAAACAACT-----TTGCATGCGAATTGGCTTGGCACTTGCTGCCTCTATGTCTGTC
ACAAGTCATTAACCGTCGCTATCATGGTTATTGAGTC-GGATGGCATTTGCTGTTTCAGCAACCCTGCTACTATATTCGC
CCTAAAATAACAAGCTCCATACAAATAAAAACCTAAGAACTGGTCAAATTTTACTC-TTTTCAGGATTAAACTGAGAAAC
TAGTATGCGTTATACTAGTAGTTAT-GTCTATCATTGACTTGCTATATGTCGTGCTTTAGTTATTTTGTATCACA-TGTT
GCTGACTTAATTGTTTTGCCTAATGTGTCGCTAACTTGTAAGATATCCGTATACACTCCGAACTGAGTAAAGATACCATC
CGTATTTGTATTCGAGTAAGATCCGCTTTGGGTTTCGTATCCTATTACATCCCTAATCGCATTTGCAGTTAAAAATTAAA
AAATAGAACACGTGCATATGCTAGGCATTATCCGATCTTCGGTGACTAATT----CTACTTACGTTTTTATCGGAAAAAT
CTACCTCATGATGCGATTAGTATGTCCAAATACATAGATTTTCAAAT------------------TTTAAAACCTATACT
ATCAAATTAAAAAATTGCAAAAGCAACAAAAAGGTACTTCCTCCGTCCCACAACACAAGACGTTTTTACAACCTATGTTA
GCTTGCAAAAGTGCCCTGTTGGAAATATAAGCAGTTTACCGAATAATTTTATTAACAGAAATATTAGATAAAGCACGACT
AGTATAGAAATGATAAAACAAGTCATGCGATTTGACAAATAGAAGGTAAACAACATC
>chr4D_160
ACTTTGCTCA----------------------------------------------------------------------
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--------GGCAAAGTTTGCCGGCGCCGGCAGGAGGGGGCGGCGGCGGTGCTGCCCGGG-TGCTCGCCTGAGCCGCCTCC
TGCACACAACACATGGGCTT--GATCCGGGTTGTTTCGGGAGCAACAATCGGACTTTCTACCCATCCAATTTCATTCCTA
TTCAGATTAGAAGTGTGTCTTGCCAATGTATGGTGTGCGTTTCAAACAAACGAATTATGTAGTTCCATATGGCGTTACTT
TTTTTTTTGGCGGGCACCATAGGGCACTACTAATATCTAGAAACTTTGTGGGACGCCGGGGTGACTTATTCCTGTCCGCT
AATTAGACCCACCTGACACACACCAAGATTTTGCACGACGTGTCCCGCTCACATCTTCTTGTCACATTGATTGGATTTGG
CTTGACCTCACGTGTTTCTCGCCAAACCACTATTATTGTTTTTAACAAACCCTAGCTACACGCTACTGTTTAGCTGCATG
TATAAAGCGCGGCCTTTTATGGTTGGAAAACAGGCGCAAAATCAGTAGGAGCAACACAGGCATCACACGAACAGTACGCA
GCGCCAGCATAAATTGAGGTCATGCCATGCAGCGAGCAAAGAAAAATAAATATATCATGAAATAAGTACTTATATTTTAA
AGAAAATAAAAACAATATATGTCTAACTAATTCCCGGGAAAAAAAGTCTAACTAAAACATGAGCATTGCTATACACTGCA
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-------------------GTATGTACAACAGGTAGCCGTTAAATTGAGAGTGTGTCAGAGCAGAGAGGATGCTCTCTCA
GACTAGTTAAACGAGATGAGAGTCATGCATTTTGCAGCATGCGGTAGGCATGTATGTGATGCCCGTTGCGTTGTGCACCG
GGTCTTTATGGTTCTCACGCGTGCGACCTCTATATATATCGCCTCACCCCTCTCCGCTCGCACTTGACTTCTCTCTTCTT
GCCGCCTCCTCCTCCTCCTC---TTCT---TCCCACCCACACAGACACAGGCTACGCAAGGTTTTTCCTCCCCTCTCAAG
TCTCAACTACCCAACACGCTTCTCGCCGATTTCATTTCACGACATTTTCCTCCCGATCTTCATGCCAAAGCTTCTCGCCA
TCTCCATCTTGCCGTTTATTTT-GGTCGTAGCCAAGCACTGAATCTTCAACACGCTTGCCGT---TTATTTTGCAGAGCG
GCGAGGGAGGAGAAGGAAGAGGAGCGGGGGATGGCGGGCTGCGGTGAAGCCAAGACATCATCGGTTTCCATGGATGAAGA
GGTAAGCTCCCCATAGCCTCTGTGTATTGTCTGCCGGCGGAACACTGATGCATGATCGATGATTACAATTTTCAAGTTCT
TCTGTCGGTAGTCTCCGACATCCCCGCGACTTGATTGCAATGGTTTCCTTGGCTGAGCCTTCTGA---ATTATGGGAGAC
TCGTAGAGTCGTAGTTGGTTAGTATAACTTGGTAGAGAGATGGGTGGAGTGAGTAATACGTTCAGATATTAGCTGTACAT
GAACGCCATTGATGCATAACAGAGAAAGCTTGGGAGTTCCAACTAACCCAACTTGGGGAAACAGGGCTTGCTTAGGAAGC
TGTTCTCAGTCAGTATTA---CCCTGTGCCCTGTCCCTGTCCACCCTACCTTTCTCACACAAATATGCAGAGTAAGCTCG
TCAATTATCTCTGTTCTCCCATGAGCGTGTCAC-----TGGCCATGTCATTTCTCCTTTTTCTGTTTGATTGC-------
CTGTAGTGCTTCGCTAGCCAGTAAATAAAATGTCTAACTTTTGTCAGTTCTCTGAAACTGAAGTGTTAC-----------
---------------AGTATTTGGGTGCATCTTAATTTGGAACTTGAGT--ACTAGAAGCGGTTTTAATCCGCAAAATTG
CCGTTTTAACCATTCAGAGCAAGTTCCTAGAGAGCATTA-----CCCAACGCGCTCGCGCACCTTAATGAAGAAGACGCT
CTTATCCTCAGCACCTACTTAGCAAACCAGCAATGTCCTAATC----TA-----TTAAAGACGGATTCTGCACCATCGGT
TAC----------------------GTGCAGCCATGGCAGATTGCTCCTACTGACACCACGCGCACCAACATTTGCTAAC
GACGTACCGTACCTAGAAGCAACTAATGAAGGGCAGGAAGGCTAAACTCTACGCAGTCTGATGTCTGCGTGCGACTCAAC
AATCTATTGAGCGATCAAAAGGCTCCGAAGGAAAC-AAAGGTGATGTGCGTGTGCGTCCATGATGGCTGACGGGCTGCCG
CTTGTCTGCGCACGCTGCTGCTGTCACACTTTCACTGGCCGCCACACTGGCACTGCCCAAGCAAGAATCTCTCACCTGAC
CCGCCCGCGTCACCTCTGCAGGCTGCAACCAGCTGCAGCCGCATGAGCTAGCAACGTACTACTAGTACAGCACGAACGAA
CAAACACCTGTGGTGTGGTACCTTCCCATGTCAGCAGCAGTTCACCACGGCGCCAAGAAGTCGACACG---GCGGCAGCG
AGCCCTCCGGTCTCAGGATCGATCGGAGTCGGAGCC-TTGCGTCGCTTTCGTGGGCTTTGTTAGGGGATCGCCATCGCTA
GATCGCTCACATGTTTTTAGTGCCTTCTCGTGGATCAGGGGCAACCACGTCGATCGCCATGATTTTGTTGCTGGTTTGGC
TCCCTCGTGTCCAGTGGCCGCGAAAAGGGGGGT--TCGTGAACGCTCCCGCTTTTGGCCAAATCTTTCGGCCGTCCGTCG
GTTTCGGCGATCGGAAAGGCAGCCGAGCCGATTGATCCCCCTCTCGTCTAGGCTGGGATCGATATAGGCGAAGCGTCTTA
TTTAATACTGCATTGGTAGGGTCTTAAACTCAAGACCTCTTGGCTCTGATACCATATTAAATTCATGCATCAGCCAACTC
ATCCAAAAGTCCGAACTGATAGAGGAAGGTGGGCAATATATCTCAACAGGGATAATTGTCTGTCTGTGTAATGTACACTG
AGCAGACGGATAAGCGTGCGTGCGTACA----------------------------------------------------
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-------------------TGCATGCATCTTTCTTCCGTCCGTCCAGGCCTGCAG--------------GGAGCTTTGGA
ACCTGATCCCGTAGCTTTCTCCCTCGCGTTTGGCGGAGGCCCTGTCTCTGCTCCGTCTCGTATA--TTTATTTTCTTCTG
ATACTGATACAGTGTCTTGTTCTTCTTCAGGCGTGCGGCATAG---AGAAGAAGTTTGGCGGGATGGCGCCCAAGAAGCC
TCTCATATCAAAGGTAACAGCGCTAGCAGC-----------CAGAAATAAGCACTGTCGAGCAGCGCATGAAATATCTAT
GGGTCTCTAGAAGAAGA-----------CGTTTCCTTGATTTGGTCTGGTTGCATG-----CTAAT------AATGCAGG
ACCATGAGCGTGCCTACTTCGACTCCGCAGATTGGGTCCTTGGCAAGGTCAGACAACATAACACAACA------------
------ACTTATTCAGCCATGACATATCTTCATTCAGAACTGCATCTCACCATGCATGCTTAATCGATCTCCTGCCATTT
TCTCCAGCAAGCTGCAAACAGCAGCTCAACGGCTGCGGTCGAATCGCTCAAGCCCAAGCTCAAGGTCAGTACAACAGCGG
GAAGCTTCAGCCCAGCTAAACGATACTGTCAGTCAGGTC--------------AACTGATGCTATTTTTT--CCTGCTTG
CTTCTTCAGAGAACTCCTCATCCCCAGCTTCCCCCTCGCAAGCCCACCTGTGCGTCTGGCTGAGACACAAGGTAAGAGGA
GGAACCCTCAAAGTCGCAGGATTTTTCACACTGCAGATTCACCTACGTGACAGTTGTTGCTTCTTGTAG---------GG
GGTCACACTGCAGCAGCAGCAGCCAGCAGGTGAAGAGCTCGTAGGGAGGAGAGGAGCGAGCTCGGATTAATGTTGTTTAG
CTGCTCCCAAATTCGTAATGTAGGAAACAACT-----TTGCATGCGAATTGGCTTGGCACTTGCTGCCTCTACGTCTGTC
ACAAGTGATTAACCGTCGCTATCATGGTTATCGAGTC-GGATGGCATTTGCTGTTTCAGCAACCTTGCTACTATATTCGC
CCTAAAATAACAAGCTCCATACAAATAAAAACCTAAGAACTGGTCAAATCTTACTC-TTTTCAGGATTAAACTGAGAAAC
TATTACGCGTTAGGGTAGTAGTTATCGTCTATCATTGACTTGCTTGGTTCT--------GTTATTTTGTATCACATGGTT
GCTGACTTAATTGTTTTGCCTAATGTGTCGCTAACTTGTAAGATTATCGTATACACTCCGAACTGAGTAAACATACCATC
CGTATTCGTATTCGAGTAATATCCGCTTTGGGC-TCGTATCCTATAACATCCATACTCGCATTTGGGGTTGCTTTG-AAA
TACGAAAACAAAAGCGACCAG--GGCATTATCCGATCTTTCCGTGACTAATTCTACTACTTACGTTCTTATCGGAAAAAT
CTACCTCATGATGAGA--------------TACGTGGATTTTTTAAAATATTTTCATTTCCAAAATTTCAAATCTATACT
ATCAAATTAAGAAATTGCAAAAGCACAAAAAGG-----------------------------------------------
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---------------------------------------------------------
>chr4B_160
ACTCTGCTCA----------------------------------------------------------------------
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--------GGCAGAGTTTGCCGGTGCCGGCAGGAGGGGGCGGCGGCGGTGCTGCCCGGGGTGCTCGCCTGAGCCGCCTCC
TGCACACAACACATGGGCTTTTGATCCGGGTTGTTTCGGGAGCAACAATCGGACTATCTACCCATCCAATTCCATTCCTT
TTCAGATTAGAAGTGTGTGTTGCCAATGTATAGTG-GCGTTTCAAACAAATGGATTATGTGGTTCCATA-----------
---------------------GGGCACTACTGATATCTAGAAGCTTTTTGGGACGCTGGGTTGACTTATTCCTGTCCGCT
AATTAGACCCACCTGACACACACCAAAATTTTGCACGACGTGTCCCGCTCACATCTCGATGTCTCATTGATTGGATTTGG
CTTGACCTCACGTGTTTCTCGCCAAACCACTATTATT---ATTAACAAACCCTAGCTACACGCTACTGTTTAGATGCACG
TATAAAGTGCGGCCTTTTATGGTTGGAAA----------------TAGGAGCAATACAGGCATCACATAAACAGTACACG
GCGCCAACAAAAACTGAGGTCATGCCATGCAGCAAGCAAAGAAAA-TAAATGTATCATGAAATAAGTACTGTATATTTAA
AAAAAATAAGAACAATATATGTATAT-------------------GTCTAACTAAAACATGAGCATTGCTATACATTGCA
ATACAATAACTAGAACTCCGCGTCCCTCGCGTCGCCATCCCTGCCGACGGCGGGGGAACTCCAGCGACCAGCCACCACAA
CCCCCCTCCCAGCTCCTCCACCACCTCGCCGCCACCGGAGGAGTGGCCGGCGAAGCCCGCGCCGGCTCCCGGGATGGTGG
CGGTTGGGTGCCTCGTCCGGCTACAGCCTCCCCGCCGGCACGCCCGTCCGCCAGCCTCTGTGCCCTACGCCAGCCGCTCC
GCCATCCGCTGGTGCGTCTCTGGCAGCGGCCTACTCCCCGCCCCGCCCGTCATCCCTACCAATAGTCCTGCTCCCCTCCG
CATTCGCTCTCCGTGTCAGATCTCGGCCCAGCGAGGTTCGTCCTGTCGTCGGCGTCCCTCTTCTGCCGGTGCCGGGCCCG
GGGTTGGGGTAGTGTCCTCTTCGGCTGGCTCGGGGCCATCCTTGTGGCGTGCGACGACGTTCTTCAAGGATATGACGCCG
GGATGACGCAAGGTGTCCACGGCGGCCCGTAGGATTGTTGCGCTGAGCATGTGGGGTTGCGGCGATCTGCTCGCCTTCCA
CGTGTACGGTGCCGATACAACGCTGCGATTTTTGGTTGGTGGTGGTGATCTAGATCATATCTGCCGGATGGTGCTGAATG
TAGATTGCTCTGCAACGACTTCCTATGGATCCACGACAGCGGAGATCATCGAAAAGACTTCGGGAGGTTTTATCTCTTGA
CCTGTTGGATGACTTCAGTGATATGATACAAATTATGGACGATGACTTGACGCAGAGGGTAAGTTGTGGAGTGGTGGCTA
TCCAATTGCAGCTGGTGGGATTTTGAAAAAGCGGGGGCGACAACACTTGTATGACTTGGATGATGGTGTTGCGTGCACCA
GGTCTCGAGCTCCGGGATGAAAACCTAGGTCAGACTCGAGTGGTTACACCTGGCAAAGGCGATGATTTTTTACGTCGTTA
CCTTGTTGGAGGATTGCTCGGATTTGCTTCGACTGATTCTTCAGGGTGAAAACTTAGATTCGGGCCTTTGTGGTTAGATC
CGGTGACGACGACGCTTGAGTGCCGCTCCCTTCCTGGAGGTGTTGTTGTTGAAGATCCTCCATATCATTATGGTGTCAAT
GGTTTTTGTGCGGATATAAGTCTCATTTGTAGTTTGTCGATCACTGATTTGATCGCTTTAGGCTTCTTCTTTTTCTTTTT
TTCCTCGCCGACACATGGTCTTATGACTTTGCTAGTTGTTGGTGTGCGTGTGTGTGTTGGATTGGCTGCGTGCATCCTAA
TTATGCAAAGGCCGGGTGTATGCTCATTGTATTATGTATTCTCTTGATGCTCCATTTTGAGCCAATAAAATTCACCCTTT
TCCGAAAAAATACACCGCTGTATGTGCCACGGGTAGCCGTTGATTTGAGAGTGTCTCGGAGCAGAGAGGATGCTCTCTCA
GGCTAGTTAAACGAGA-----GTCATGCATTTTGTAGCATGCGGTAGGCGTGTATGTGATGTCCGTTGCGTTGTGCACCA
GGTCTTTACGGTTCTCACGCGTGCGACCTCTATATATATCGCCTCACCCCTCTCTGCTCACACTTGACTTGTCCCTCCTT
GCCTCCTCCTCCTCCTCCTCCTCTTCT---TCCCACCCACACAGACACAGGCTACACAAGGTTTTTCCTCCCC-------
TCTCAACTACCCAACACGCTTCTCGCCGATTTCATTTCACGACATTTTCCTCCCGATCTTCATGCCAAAGCTTCTCGCCA
TCTCCATCTTGCCGTTTATTTTGGGTCGTAGCCAAGCACTGAACCTTCAACACGCTTGCCGTGCCTTATTTTGCAGAGCG
GCGAGGGAGGAGAAGGAAGAGGAGCGGGGGATGGCGGGCTGCGGTGAAGCCAAGACATCATCGGTTTCCATGGATGAAGA
GGTAAGCTCCCCATAGCCTCTGTGTATTGTCTGCCGGCGGAACAGTGATGCATGATCGATGATTACAATTTTCAAGTTCT
TGTTTCGGTAGTCTCCGACATCCCCGCGACTTGATTGCAGTGGTTTCCTTGGCTGAGCCTTCTGTTGTATTATGGGAGAC
TTGTACTAGTTGG-----------TAACTTGGTAGAGAGATCGGTGGAGTGAGTAATACGTTCAGATATTAGCTGTACAT
GAACGCCATTGATGCATAACAGAGAAAGATTGGGAGTTTCAACTAACCCAACTTGGG-AAACAGGGCTTGCTTATGAAGC
TCTTCTCAGTCTGTATTA---CCTTGTGCCCTGTCCCTGTCCACCCTACCTCTCTGACATAAATATGCAGAGTAAGCCCG
TCAATTATCTCTCTTCTCCCATGAGCGTATCACCTGTTTGGCTATGTCATTTCTCCTTTGTTTTTCTGTTTGATGATACG
CTGTAGTGCTCCCCCACCCACTAAACAAAATGGTTAACTTGTCAGTTTCCTCGTACGTGTAGTGTCAAAAACGCTCTTAT
ATTATGGGATGGGGGAGTATTTGAGTGCATCTTAATTTGGAACCTCATTACACTAGAAGCGGTTTTAATCCGCAAAACGG
CGGCCTTAACCATTGAGAGCAAGTTCCTAGAGCGCATTA-----CCTAACGCGCTCGCGCACCTTAATGAAGAAGACGCT
CTTATCCTCAGCACCTACTTAGCAAACCAGCAATGTCCTAATC----TACTCCATTAAAGATGGATTCTGCAGCATCGGT
TAC----------------------GTGCAGCCATTGCAGATTGCTCCTACTGACACCACGCGCACCAACATTTGCTAAC
GACGTACCGTACCAACAAGGAGCTAATGAAGGGCAGGAAGGCTAAACTCTACGCAGTCTCATGTCCGCGTGCGGCTCAAG
AATCTACTGACCGATCAAAAGGCTCTGAAGGAAACAAAAGATGATGTGCGTGTGCGTCCATGATGGCCGACGGGCCACCG
CTTGTCTGCCCACGCTGCTGCTGTCACGCTTTCACTGGCCGCCACACCGGCACTGCCCAAGCAAGAATCTCCCACCTGGC
CTGCCTGCGTCACCTCTGCAGCCAGCTCC---------------GAGCTAGCTACGTAGTA------CAGTACGAATGAA
CAAACACCTGTGCTGTGGTACCTTCCCGTGTCAGCAGCAGTTCACCACGGCGCCAACAAGTCGACACGGCGGCGGCAACG
AGCCCTCTGG--TGAGGATCGACCCGAGTCGGACCCTT-GCGTCGTTTTCGTGGGCTTTGTTAGGGGATCGCCATCGCTA
GATCGCTCACATGTTTTTAGTGCCTTCTCGTGAATCAGAGGTAACCACGTCGATGGCCATGATTTTGTTGCTGGTTTGGC
GCGAAAAGT--------------------GGGT--TCGTGAACGCTCCCGCTTTTGGCCAAATCTTTCGGGCGTCCGA--
------GCCGACTGATGCCGGCCGGGGACATGGCTGGGTGCGTGTATCATGCACGCCGTCGCGTCGGTC-----------
--------------------------------------------------------------------------------
------------------------------------------------GGGATAATTGTCTGTCCGTGTCATGTACCCTG
AGCAGACGGATAAGCGTGCGTGCATGCATGCATGCATCTTTTTTTCTTTTTTAGGAATTGTTCATTCAAATCACGAATTA
GTACAGAGTAGGTGACCCTTACAAGCACACTGAAACGCAAAAATAAAGGACCAAGAATACCTAGAGTACCCTAAGACAAC
CATAACACAAGAAGATCTCCGGAGCCCTGTGTCATCATCCCTGAATCTTGAGAGAAGACCCCTGCAGCAAAAGGATCTGC
AACCAGTCGCAAACAGGTCATCATCTTCGACCACGGTACAATTGTCGCCACGCTGCTTCCTCCTTTCTTGACACCAGCGC
TGAGAGGGCATGGACATCAATCCAACACACCTGCAACAGCCGTCGCCATCTTTGGCTTTGAGTACCGCGAAAAGTGTCCC
TTCCGGAAGGAAGAGATCACGAGTCATCCGACCGGTTCGGCACCGCGGCCGGGCCATCCGCCCGGGCAAAGCAGGATCTC
CCACCAGCATCAGCGCAGAGGAAGGAGAAGAACAGCAGCAGCAAATCGTACCAACAAGGAAGAAGAAAGGTCTTCGTCTC
CCTACCTCCATCGCCCATCTGAGGATCCAAACGGCCAGTGCCGATGGACCTCCAACCACCATAGCCCGCGACCTCGACGA
GATCCGGGGATCCCCAACACCGCTGGCTCCTAGACGAAGGCAAAAGCCCCGCCTAACTGCGAACGGAGCCCGGACAAACT
TATTCCGACGCGACACCACCGCAATGGCCTCGGCAGCGTCTCCCTCAACCCTAACCCTACCACACGCCCACCTAGTGAAC
AGACCCGAGGTTCCCCCTCCCTCCCGCCGCCGGAGCGGCCGACGAAGAGAGAGGGAACCGGCGGCGTCACTGGCGGCGCG
CAAGGGACCCCTAGTCGCCTCCCTGATCGCCTCGAGCGATCCAACTTTTTCGGACGTGCGGTTAGGAAACAAATAGCAAA
TTATTATCCTACGCAGAGGTGCATGCATCTTTCTTCCGTCCGTCCAGGGAAGCTAGCCGAGCGTGTCGCGGAGCTTTGGA
ACCTGATCCCGTAGCTTTTTCCCTCGCGTTTGGCGGAGGCCCTGTCTCTGCTCAGTCTCGGATACGTTTATTTTCTTCTG
ATACTGATACCGTGTCTTGTTCTTCTTCAGGCGTGCGGCATGG---AGAAGAAGTTTGGCGGGATGGCGCCCAAGAAGCC
GCTCATATCAAAGGTAACAGCGCTAGTGTTTTACTACTGAGCAGAAATAGGCACTGTCAA-----GCATGAAGTATCT--
------CTAGAAGAAGAACACATCTGGCCGTTTCCTTGATGAGCTTGGTTGCATTCTAAATCTAAT------GATGCAGG
ACCATGAGCGTGCCTACTTCGACTCCGCGGATTGGGTCCTTGGCAAGGTCAGACACCACAACACAACA------------
------ACTTATTCAGCCATGACATATCTTCATTCAGAACTGCATCTGACCATGCGTGCTTAATCCATCTCCCGCCATTT
TCTCCAGCAAGCTGCAAACAGCAGCTCAACGGCTGCGGTGGAATCGCTCAAGCCCAAGCTCAAGGTCAGTACAACAACGG
AAAGCTTCAGCCCGGCTGAACGATACTGTCAGTCAGGTCTATCTAGAAACAATTACTGATGCTGTTTTTG--TCTGCT--
-TTCTTCAGAGAACTCCTCATCCCCAGCTTCCCCCTCGCAAGCCCACCTGTGCGTCTGGCTGAGACATCAGGTAAGAGGA
AGAAGCCTCCAAGTCGCAGGATTTTTCACACTGCAGATTCACCTACGTGACAGTTGTTGCTTCTTGTGGTGCGTTGTA-G
GGTCGCATTGCAGCAGC----------AGGTGAAGAGCTCGCAGGGAGGAGAGGAGTGAGCTCGGATCAATGTTGTTTAG
CTGCTCCTAAATTCGTAATGTAGGAAACAACTTTGCATTGCATGCAAATTGGCTTGGCACTTGCTGCCTCTATGTCTGTC
ACAAGTGATTAACCGTCGTTATCATGGTTATTGAGTCTGGATGGCATTTGCTGTTTCAGCAACCTTGCTAGTATGTTCGC
CCTAAAATAACAAGCTCCATACAAATAAAAACCTAAGAACTGGTCAATTTTTACTCTTTTTCAGGATTAAACTGAGAAAC
TATTACGCGTTATAGTAGTAGTTATCGTCTATCATTGACTGGCTATATGTCGTGGTTCAGTTATTTTTTATCACATTGTT
GCTGACTTAATTGTTTTGCCTAATGTGCCGCTAACTTGTAAGATATTCATATACACTCCAAACCAAGTAAACATACTATC
CGTATTCGTATTCGAGCAGTATCCGCTTGGAG-TTCGTATCCTATAACATCCGTACTCGCATTTGGAGTTGCTTTGAAAA
TATGAAAACAAAAGTGAGAAG--GGCATTATGCGATCTTTCCGTGACTAATTCTACT---TACGTTCTTATAAGAAAAAT
CTACCTCATGATGCGACCAGTCTGCCCAAATACGTGGATTTT--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
>SNPs
S-S-SSS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS-----S--------S-SS---S------S---S-----S--------S-----------SS----------S
----S--S------------------------S---S----------S--------------------------------
-S--------------S----------------S----------------------------------------------
--------------------------------------------------------S-----------------------
--------------S-------------------------------S---------------------------------
-------------------------------------S------------------------------------------
--------------------------------S---------------------------------------S-------
---------S-----------------S-------------------------S--------------------------
-------------------S---------------------------------------S-------------------S
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------------------------------------------------------------------------S--S-S--
----------------S---------------------------------------------------------------
-------S-------------------------------------S-----------------S----------------
---------------------------SSS----------------------S---------------------------
--------------------------------------------------------------------------------
--S------------------------------------------------S----------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------------
------------------------S--------S----------------------------------------------
S-----------------------------------------------S-------------S-------S---------
-----------------------------------------------S---S----------------------------
------------------SSS---------------------SS-----------------S------------------
----S------------------------------------------S--------------S-SSS-------------
------------------------------------S---------------S---SSSS--------------------
-----------------------------------S-------------SS----------S---------S--------
-------------------------------------SSSSSSS----------------S-------------------
---------S-----S------------S--------------SSSS---------------------------------
---SSSSSSSSSSSSSSSSSSSSSS-----S-----S-------------------------------------------
--------------S-----S----SSS-S--------------------------------------------------
------------------------S---------------------------S---------------------------
-------------------------------------S------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
-S---------------------------------------------S---------S----S-----------------
--------------------S---------------S-----S-----------S------------S---S--S-----
------S-----S--------------S---S-SS-----------S---------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S--------S-------------------------S------------------
-----------------------------------------------------S--------------------------
--------------------------------S------S---SSS----------------------------------
---------------------------SSS-----------S-S-S------------------------S---------
------------------------------------------------------------------SSSSSS--------
--------------------------------------------------------------------SSSSSSSSSSSS
SSSSSS----------------S-S--------------S----------------------S-----------------
------------------------------------S-------------------------------------------
------------------------------------------S---------------------------SS--------
--------------------------------------------------------------------S-----------
---------------------------S--S---------------------------------------------S---
-------S----------S-------------------------------------------------------------
--------S--------S--------------------------------------------------------------
------S---------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--S--S--------S---------------------------------------S--S----------------------
----------------------------------------------S------------------------S--------
------S------------S------------S------------S------S--S---------S----SSSSSSS---
S-SS-S----SSS--SSSSSSSS----------------SSSSSSSSS-S----------------S-------------
----------------SS---S--S--------S-S------SS--S---------------------S---S-------
----------S--------------SS----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2408
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--------------------------------------------------------------------CGTTGTGCACCA
GGTCTTTG------------------------------------------------------------------------
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>reverse_3530
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---------TGCACCCACTTAGCAAACCT---------------------------------------------------
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>forward_3205
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-----------------------------------------------------------------TGCAGAGTAAGCCCG
TCAAC---------------------------------------------------------------------------
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>reverse_5547
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--------------------------GTCTTTCTTGCGTCCGTCCA----------------------------------
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>forward_3813
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---------------------------------AACAAAGGTGATGTGCGTGC---------------------------
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>reverse_5911
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----------------------------------------------------------------------ACAATGCAGG
ACCATGAGCG----------------------------------------------------------------------
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>forward_4576
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----------------------------------------------------------------------------CCTG
AGCAGACGGATAAGCC----------------------------------------------------------------
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>reverse_7161
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----------------------------------------CTCCGTCCCACAACACAAGA--------------------
--------------------------------------------------------------------------------
---------------------------------------------------------
