>input_sequence_30998
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-------------------ATGGATCTTTCCGCCGCAAGCGCCCTCGCCGTCCTCAGCAAGCTGCAGCTCCTCGGCTTCT
GCGTCGGCCTCCAGATCCCCGACGACGCCGCCGACCCCTCCGAGGTGTTCGACACCATCGTCGCCGCGTTCCTGCGCGAG
GTCTACCCCGGCGAACGCGATGCGCGTCCGCTCCCGGCCGCCCTCGGCGACGGGCGCCGCGTGGACCTCCTCCGCCTCTT
CACCGCCGTCCGCGCCGCTGGCGGCTACGCCGTGTCCTCGTCGCCCTCTGTCGGCGCCGGCGTCTGGGCCGCAGCCGCCG
GATCTGCCGCCCTCGCCGCGCCCGTCAAGCTGATCTATGCCAAGTACCTCGGCGCGGTGGAGCGCTGGATCCAGAGGCTC
CCGGAGGCGCAACCACCGCCGTCTGACGAGATGCGGCAGGAGA---TGCTCTGCGTCCGCGGTGCCAATGGAGTTGAGAT
GGAGAA------------CTGCAATGGGAGGGATCAGCAGCACGGGGTGCTGAAGAGGAAGAGGGAAGACATTGCTGGGA
TGCTGGATTGGGTGAGGGGGCTCGCCGAGAGTGTCTCGGAGGAGGGCGCCATCGCCGCCGGCTTGGTGGATGGATACTTC
CCGGTGGCATTGGCGGCGCGGGAGGCGGTGTCCAGGAAGAGGGCACGCCGCGCAAGCGTGACCAACGGCGCGCTCTTGCA
GGTGATTCCGACACCTTTGATAAACTTGTTGCTGAAGATAATGTTTGACATATTGGTATTGCATCACTGCACTGCAC---
--ATATATAGACAGACATACATACAGAATTGGCATTGGATTACTTCAGCAATACATACAGCAATAAAC-------TTGTT
AGTTGGCAAC----ATCTGTATCCCTTTGATCTTCTAC----GTTTAGGCCCTGTTTCGATTGTCGTTTTCCTTTTAAAT
ACCCCTGGAAAAAAAATACACGTCTCTACCGAAAGATAAGATTGTCGTTTTGTTTCCAGCTGAAAATTGCTCGTGGTCGG
TAATTTAAATACCTCCGTATCAAATTACACCGACGCCAAGCGCGGCCTTAGTGCCACTGGACTGTAATAGTGCAGATCCA
CCTATTAGATAATTTGTTCTATTTCCCCTAAACATATAAGTAAATAAATAAAATTCATGCTTCAGGTCTTACCAGTCTTT
TCATTAGTGCTTTAAT----GCCTAAATACCCTTTGTAAATTTATTTTTTGGCTAGCTACCCTACAAATGGAGCATTGTC
GTTCCTTTTCTTTCTAATTTCGATTGTGCAGATTGGATGCTGGTAAAGGAGCATTTAGTATTTTCTTTTTTTTAATGAAA
TTAACTGCATCAATCTTCATTTTGGTGACATGTTATATGGATCGGGCAAAATGTGTGAACTTCCCATTTGCGGATCCTA-
--------------------------------T----ACCAGAGGGCAAAATCTGGCCTAGCCCTGCTTAAGCATTACAC
TGTGTACAATTGAAGCTACAGTATCTTTACTCCCTGATGTTCAGGGCATGTATCATTGGGATGACGAATACTATAAATAG
AGCTATGAAATCTCCCTTATGCTTTGGCCCCGGATATTACCTGTCGTGTACTGTGGGTGGTTGAAAATA-----------
------------------------------TTTTGTTTGCTTTATTGCCTTGAAGATGATAGTCCCCTATAAATAGAGCT
ATGAAATCCTACCTTTTTGGGTAAGCCGATTACTCAGCAACTGGATACATTTCGTATTCATAGTCACTGAACC--TTTTT
CTTCTGATGGCGCAGGAAATTGGTTGCAGGTGCTGCAGGAGTACCACCTGTGCCAGAATTGGTGTTCAATGCAGCAAAAT
TGTTCAACAACCTGGTCCGGATACTAATAATCTAACAAGAGTTGTTGATGTGAATGGATCCTCAATGGTCATAGAACAGG
CGAGCAGTGTGAACGGACAATTGAAGCATTCTAAAAGTCAGCAGAGGAACAAACTACTAGTGGGCCCCAATTATCAAGCA
GTGGTGCCACAGTGGACCGGCGTTCCGCCTGAAAATTACGGCGATCCAGAAACCCTCAAATGGCTGGGCACAAAAATCTG
GCCTCCAGAAAATGAGAAGAAAATAACCCCAACCTACCATGACCGTATTGGCAAAGGCAGAGAATTCGTTTGCAGCTGCA
ACATCCCGCGATCAGTAGAATGTGTCAGGTTTCACATTGCAGAAAGGCGGCTTCAGCTGAGACGTGAACTCGGCTCTGCT
TTCTACCAGTGGGGATTTGACCGTATGGGCGAGGAGGTTGCCCTTTCTTGGACGGATGAAGAGGAGGCAAGTTTCAAGGC
TGTAATGCAGACCTATGCGCCATCTCCAGGAAGGGATTTATGGAACCATCTCCAGTCATCCTTCCGCTGGAAGCGGAGGA
AAGAACTTGTGAGCTATTATTTTAA-------TTGTTTTCTGCTTAGGCGGAGGTGTTACCAGAATAGGACCGCACCAGA
GAAGATAGATAGTGATGATGAGGAAGAGACAGAGTTTAGGTTTTTTGGAAACCGTATGGGACAAAGTGCAACCAAGTATG
ACAGCACCAAGCACACCGTTTGCGTTCAGAGTACTCACTGCATGGATCTGGATGATGAGTAG------------------
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>chr2B_1_TraesCS2B01G023200
TAGACGATGGATCCATGTATGTTGGCATGGTAAAAGGATAATCTCCGTAAATTAT------------GAGCTTTCTAGAA
GCGAGGAGATTCATTCTGACTTG-TTTTGGCTTGTTTCTTCACTCTCTTCATAGTGGA----------------------
----TGCCTACTTCTCTCACCTAGTTGCTCACGACTGAAACAAACAGGTTGGTTGCGGCTCGTCG--AAGCCACATCTCA
TACTAGATTGAGAGCATGCCAGACTTCTCGACCAAGGGAGGAGTATGGAAGTGGGGTGATGCAGGTGAGGGACTAGCGAA
ACAAGGTGGGCGCCATGGCCGATGTAGTGAGATTAGGGGCATTGCGATTTCTTTTT------CACTTATTGACAGGGAAG
TTAGGGATTCACGGGTTCACATGATGC-TAGGGGGCAGCGGCTGCCTTGCAGGATGGGCGGG-GGCGTCCATCTCGTGCA
TATTGGTGGCTCCACGCAATGAAGGGAGGCGGTGCCAGAGAGAATAGTCGGGCAGCGCCATCTAGGTCAAAACATTCGCG
CGAGGGGTGGCGGACCGTCGAGCGATGTCATAGCGAGGCGATCCCACTGGTGGGGGA-AGACGCTGATTTAGCCATCACG
ACGACCGCAAACACCCCGCTTAATAGTGAGGATAACCCGCTTACATCATCTTGTTATGCTTGCTTTTGCTCTTCATGGAC
GATGGGCTCTTTCTGGAGGCATCTAGA----AGTAAGGAGAATACTTCCGAAATCTGTTCGACTTGTTAGGACTATAGTA
TAAATTACCCCAACCACCAGGACAGATGGCAATTTGATCTCACAACTACCCAAATTTGCCTAAAGTAATTGCTCCAAATA
CTTGCCAAATTTTGAAAAATATTTAAACACATACTCTCAACTTTGTTTCCCCATCC-----ACCCAAACCCTAGAGAGAA
AAAAAAGGAAGGAAAAAAATCAACAAAAAAAGAGAGAGAAAATGCGCCGCCGTTGCTCGCCGTCGTGACCCCGCCGCCGG
CGAGGCCTCCCCCGCGTCCATGGATCTTTCCGCCGCAAGCGCCCTCGCCGTCCTCAGCAAGCTGCAGCTCCTCGGCTTCT
GCGTCGGCCTCCAGATCCCCGACGACGCCGCCGACCCCTCCGAGGTGTTCGACACCATCGTCGCCGCGTTCCTGCGCGAG
GTCTACCCCGGCGAACGCGATGCGCGTCCGCTCCCGGCCGCCCTCGGCGACGGGCGCCGCGTGGACCTCCTCCGCCTCTT
CACCGCCGTCCGCGCCGCTGGCGGCTACGCCGTGTCCTCGTCGCCCTCTGTCGGCGCCGGCGTCTGGGCCGCAGCCGCCG
GATCTGCCGCCCTCGCCGCGCCCGTCAAGCTGATCTATGCCAAGTACCTCGGCGCGGTGGAGCGCTGGATCCAGAGGCTC
CCGGAGGCGCAACCACCGCCGTCTGACGAGATGCGGCAGGAGA---TGCTCTGCGTCCGCGGTGCCAATGGAGTTGAGAT
GGAGAA------------CTGCAATGGGAGGGATCAGCAGCACGGGGTGCTGAAGAGGAAGAGGGAAGACATTGCTGGGA
TGCTGGATTGGGTGAGGGGGCTCGCCGAGAGTGTCTCGGAGGAGGGCGCCATCGCCGCCGGCTTGGTGGATGGATACTTC
CCGGTGGCATTGGCGGCGCGGGAGGCGGTGTCCAGGAAGAGGGCACGCCGCGCAAGCGTGACCAACGGCGCGCTCTTGCA
GGTGATTCCGACACCTTTGATAAACTTGTTGCTGAAGATAATGTTTGACATATTGGTATTGCATCACTGCACTGCAC---
--ATATATAGACAGACATACATACAGAATTGGCATTGGATTACTTCAGCAATACATACAGCAATAAAC-------TTGTT
AGTTGGCAAC----ATCTGTATCCCTTTGATCTTCTAC----GTTTAGGCCCTGTTTCGATTGTCGTTTTCCTTTTAAAT
ACCCCTGGAAAAAAAATACACGTCTCTACCGAAAGATAAGATTGTCGTTTTGTTTCCAGCTGAAAATTGCTCGTGGTCGG
TAATTTAAATACCTCCGTATCAAATTACACCGACGCCAAGCGCGGCCTTAGTGCCACTGGACTGTAATAGTGCAGATCCA
CCTATTAGATAATTTGTTCTATTTCCCCTAAACATATAAGTAAATAAATAAAATTCATGCTTCAGGTCTTACCAGTCTTT
TCATTAGTGCTTTAAT----GCCTAAATACCCTTTGTAAATTTATTTTTTGGCTAGCTACCCTACAAATGGAGCATTGTC
GTTCCTTTTCTTTCTAATTTCGATTGTGCAGATTGGATGCTGGTAAAGGAGCATTTAGTATTTTCTTTTTTTTAATGAAA
TTAACTGCATCAATCTTCATTTTGGTGACATGTTATATGGATCGGGCAAAATGTGTGAACTTCCCATTTGCGGATCCTA-
--------------------------------T----ACCAGAGGGCAAAATCTGGCCTAGCCCTGCTTAAGCATTACAC
TGTGTACAATTGAAGCTACAGTATCTTTACTCCCTGATGTTCAGGGCATGTATCATTGGGATGACGAATACTATAAATAG
AGCTATGAAATCTCCCTTATGCTTTGGCCCCGGATATTACCTGTCGTGTACTGTGGGTGGTTGAAAATA-----------
------------------------------TTTTGTTTGCTTTATTGCCTTGAAGATGATAGTCCCCTATAAATAGAGCT
ATGAAATCCTACCTTTTTGGGTAAGCCGATTACTCAGCAACTGGATACATTTCGTATTCATAGTCACTGAACC--TTTTT
CTTCTGATGGCGCAGGAAATTGGTTGCAGGTGCTGCAGGAGTACCACCTGTGCCAGAATTGGTGTTCAATGCAGCAAAAT
TGTTCAACAACCTGGTCCGGATACTAATAATCTAACAAGAGTTGTTGATGTGAATGGATCCTCAATGGTCATAGAACAGG
CGAGCAGTGTGAACGGACAATTGAAGCATTCTAAAAGTCAGCAGAGGAACAAACTACTAGTGGGCCCCAATTATCAAGCA
GTGGTGCCACAGTGGACCGGCGTTCCGCCTGAAAATTACGGCGATCCAGAAACCCTCAAATGGCTGGGCACAAAAATCTG
GCCTCCAGAAAATGAGAAGAAAATAACCCCAACCTACCATGACCGTATTGGCAAAGGCAGAGAATTCGTTTGCAGCTGCA
ACATCCCGCGATCAGTAGAATGTGTCAGGTTTCACATTGCAGAAAGGCGGCTTCAGCTGAGACGTGAACTCGGCTCTGCT
TTCTACCAGTGGGGATTTGACCGTATGGGCGAGGAGGTTGCCCTTTCTTGGACGGATGAAGAGGAGGCAAGTTTCAAGGC
TGTAATGCAGACCTATGCGCCATCTCCAGGAAGGGATTTATGGAACCATCTCCAGTCATCCTTCCGCTGGAAGCGGAGGA
AAGAACTTGTGAGCTATTATTTTAA-------TTGTTTTCTGCTTAGGCGGAGGTGTTACCAGAATAGGACCGCACCAGA
GAAGATAGATAGTGATGATGAGGAAGAGACAGAGTTTAGGTTTTTTGGAAACCGTATGGGACAAAGTGCAACCAAGTATG
ACAGCACCAAGCACACCGTTTGCGTTCAGAGTACTCACTGCATGGATCTGGATGATGAGTAGTTGCTGATTGATTACATT
CTAGGAGGCTGGTTGAAGACTGTTAAGTAGTTTGAATTTATAAATGGTC---CCCATTCATTGATTTGGT--------TA
TGCCCATGACATTGCACATCAGTTTTTGTGAGCAAAGAGTTAGACCATTTTGCTTACTGTT-----TTCAGAGCCGTGCC
AGCAATCGAAGTTTTGAT--------------------ATGGACCTGTAT-------CCCAGAAGTAAAA----AAATGC
ACTGGTATTTGTTTTTGAAACAGAGAACTGCAGGGGAGGCCCCAACAGTAAACTTTGTTTGTACAAGTGAGAGATGAGGA
GGATATATAGAGGCAGAGTTGCAATCTTTCGA--------------GCTGAGAGGATTAACATGTTGTATACATTGTGGA
ATAGTAGTATGTTG------------------------------------------------------------------
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-----------------------------------------TTATCAGAGAGAACCTGACTGAGTGTT------ATCATC
ATGTATACCTG-------------------TACCCTCTGTGGATTGACATGTACATTGACCAGTAGGTATAAGCATACCT
G------------------------------------------------ACATTAGCCCGTTCTGGTT------------
--------------------------------GTATGTTGAGGTTAGTCTTGTGAAACTAGTGTTGGAGTTGTTCTTTGT
T---------GCATGTCTGTTTTATTTATTTGGG-T----TTCGGCATCTCAATAAGAACATGTCTGTTTTAGTCTATGA
GTTGTTTTTTCTTTTCTTTCTTGTGAGCTATAAATAAATGTCAAATATTATCAACCTAAGCACAACACTTG-------TT
TACTCCTCTGTCACACATTAACCGACAGATAAATGGGAATCGGCAG-----TAGCATAGTCTGATCTGATGTACTAGAAT
CTAGTTCCAAATAAACTCTTTGAATTTTGGGCATTAGCTTTGGTGGTGCTGTACTGTGCTGTGCTGTGCTGTGTAGGTTT
GGTGGTGCAAGATGACGGCGGCGTCTTGCTGCTGCTTTGCGACTGGCCATGTTTATGTTTGTAGTGTAATAACCAAATCT
GAGAGCTGCAACTGTAAACTAGCTTGTGGCTTGTGGCTTTGAAATCTGCAGTCTTGTCAGTGTGGTTTCATTTTGTTGCT
GCATTGTACGCAT
>chr2A_1
TAGACAACGGATCCATGCATGTTGGCATGGTAAAAGGATAATCTCCATAGATTATGAGCTCTCACAGGAGATCTTTAGAA
GTGAGGAGATTCCTCCTGACTTCTTTTTGGCTTGTTTCTTTACTCCCCTCATAGTGGA----------------------
----TGCCTGCTTCTCTTACCTAGTTGCTCATGACTGAAACAA-CAACTTGTTTACGGCCCGTCATCGAGCCACATCTCA
TATCGGATCAAGAGCATGCTAAAGTTTTGAACCGAGGAAGGAGCATGGAAGTGGGGTGAGGCAGGTGAGGGACTAGCGGA
GAAAGGTGGGCCCCATGGTCGATGTAGTGCGATTAGGGGCATTGCAATT--TTTTT------CACTTACCGACGGGGATG
TTAGGGATTCATGGGATCACATGATGCGTAGGGGGTAGCGGCGGTGCTGTAGGGTGGGGCGGCGGCGTCCACGTCGTGCA
TGCCGGCGGCTCCACGCAATGAACGCAGGCGGTGCCAGAGGGAATAGTCGACCAGCGCTATCTAGGTCAAAACGTCTGCG
CGAGGGGTGGCGGGCCGTGGAGCGGCGCCGGAGCAAGGCGATCCCACTGGGAGGGAAGAGGCGCTGGTTGCACCATCACG
ACGACCGCAGACAAT-CGCTTAATAGTGAGGATAACCTGCTTACATCACCTTGTTGTACTTACCCTTGCTCTTCATGGAC
GATGGGCTCTCACCGGAGATCTCTAGAAGT-----AGGAGAATCCTTCCGAAATCTGTTCGGCTTGTTAGGACTATACTA
TAAATGACCCCAACCACCAGGCCAGATGGCTATTTGATCTCACAACTATCAAAATTTGCCTAAAGTAATTGCTCCAAATA
TTTGCCAAATTTTGAAAAATATTTAAACACACAGGCTCGACTTTCTTTCCCCATCCACCCAACCCAAACCCTAGAGAGAA
AAAAAAGGAAGGAAAAAA-TCAGCAAAAAAAGAGAGAGAAAATGCGCCGCCGTTGTTCGCCGTTGTGACCCCGCCGCCGG
CGAGGCCTCCCCCGCGTCCATGGATCTTTCCGCCGCAAGCGCCCTCGCCGTCCTCAGCAAGCTGCAGCTCCTCGGCTTCT
GCGTCGGCCTCCAGATCCCCGACGACGCCGCCGACCCCTCCGAGGTGTTCGACACCATCCTCGCCGCGTTCCTGGGCGAG
GTCTACCCCGGCGAGCGCGATGCGCGCCCGCTCCCGGCCGCCCTCGGCGACGGGCGCCGCGTGGACCTCCTCCGCCTCTT
CACCGCCGTCCGCGCCGCCGGCGGCTACGCCGTGGTCTCGTCGCCCTCTG------CCGGCGTCTGGGCCGCAGCCGCCG
GATCCGCGGCCCTCGCCGCGCCCGTCAAGCTGATCTATGCCAAGTACCTCGGCGCGCTGGAGCGCTGGATCCAGAGGCTC
CCGGAGGCACAACCACCGCCGTCTGACGAGATGCGGCAGGAGCTGCTGCTCTGCGTCCGCGGTGCCAATGGAGTTGAGAT
GGAGGAGCCGTCCATGGACTGCAATGGGCA---------GCATGGCGCGCTCAAGAGGAAGAGGGAAGACATTGCTGGGA
TGCTGGATTGGGTGAGGGGGCTCGCCGAGAGTGTCTCGGAGGAGGGCGCCATCGCCGCCGGGTTGGCGGATGGATACTTC
CCGGTGGCATTGGCGGCGCGGGAGGCGGTGTCCAGGAAGAGGGCACGCCGCGCAAGCGTGACCAACGGCGCGCTCTCGCA
GGTGATTCCGACACCTTTGATAAACTTGTTGCTGAAGATAATGTTTGACATATTGGTATTGCATCACTGCACTGCAC---
--ATATATAGGCAGACATACATACAGAATTGGCACTGGATTACTTCAGCAATACATACATACAGAGA---------TGTT
AGCTGGCAACATCTATCTCTATCCCTTTGATCTTCTAC----GTTTAGGCCCTGTTTCGATTGTCGTTTTCCTTTTAAAT
ACCCCTGT---AAAAATACACGTCTGTACCGAAGGATAAGATTGTCGTTTTGTTTCCAGCTGAAAATTGCTCGTGGTCGG
TAATTTAAA----------------------------------GGCCTTAGTGCCACTGGACTGTACTAGTGGAGATCCA
CATATTAGATAATTTGTTTGATTTCCCCTAAAC--ATAAGTAAATAAATAAAATTCATGCTTCAGGTCTTACCAGTCTTT
TCATTAGTGCTTTAATTAAGGCCTGGACACCC-TTGTAAA-------TTTGGCTACCTACCCTACAAATGGAGCATTGCC
GTTCCTTTTCTTTCTAATTTTGATTGTGCAGATTGGATGCTGGTAAAAGAGCATTTAGAAGAGTATTTAAAAGGAGCAT-
TTAACTACTTCTATCTTCATTTTGGTGACGTGGTATATAGTTCGGGCAAAATGTGTGAACTTCCCATTTGCCGTCTC--T
GTGTTAGAACTTCTGGAGGGATACGCGGGTGCTACCAACCAGAGGGCAAAATCTGGCCTAACCCTGCTTAAGCATTACAC
TGTGCACAATTTAAGCTACAGTATCTTTGCTCCCTGATGTTCGCT-CATGTATCATTGGGATGACGGATACTATAAATAG
AGCTATGAAATCTCCCTGATGCTTTGGCCCCGGATATTACCTGTCGGGTACTGTGGGTGGTTGAAAATA-----------
------------------------------TTTTGTTTGCTTTATTGCCTTGAAGATGATAGTCCCCTATAAATAGAGCT
ATGAAACCTTACCTTTCTGGCTAAGCCGATTACTCGGCAACTGGATACATATCTTATTCATAGTCACTGAATGTTTTTTT
CTTCTGATGGCGCAGGAAACTGGTTGCAGGTGCTGCAGGAGTACCACCTGTGCCAGAATTGGTGTTCAATGCAGCAAAAT
TGTTCAACAACCTGGTTCGGATACTAATAATCTAACAAGAGTTGTTGATGTGAATGGATCCTCGACGGTCATAGAACAGG
CGAGCAGTGTGAACGGACAATTGAAGCATTCTAAAAGTCAGCAGAGGAACAAACTACTAGTGGGCTCCAATTATCAAGCA
GTGGTGCCACAGTGGACTGGCTTTCCGCCTGAAAATTACGGCGATCCGGAAACCCTCAAATGGCTGGGCACAAACATCTG
GCCTCCAGAAAATGAGAACAAAATAACCCGAACTTACCATGACCCTATTGGCAAAGGCAGAGAATATGTTTGCAGCTGCA
ACGTCCCGCGATCAGTAGAATGTGTCAGGTTTCACATTGCAGAAAGGCGGCTGCAGCTGAGACGTGAACTCGGCCCTGCT
TTCTACCAGTGGGGATTTGACCATATGGGCGAGGAGGTTGCCCTTTCTTGGACGGATGAAGAGGAGGCAAGTTTCAAGGC
TGTAATGCAGACCTATGCGCCATCTCCAGCAAGGAATTTATGGAACCATCTTCAGTCATCCTTCCGCTGGAAGCCGAGGA
AAGAACTTGTGAGCTATTATTTTAA-------TTGTTTTCTGCTTAGGCGGAGGTGTTACCAGAATAGGACCGCACCAAA
GAAGATAGATAGTGATGACGAGGAAGAGACAGAGTTTAGGTTTTTGGGAAACCGTATGGGACAAAGTGCAACCAAGTATG
ACAGCACCAAGCGCACCGTTTGCATTCAGAGTACTCACTGCATGGATCTGGATGATGAGTAGTTGCTGATTGATCACATT
CTAGGAGGCTGGTTGAAGCCTGTTCAGGAGTTTGGATTTATAAATGGCC---CCCATTCATTGATTTGGT--------T-
-------GACATTGCACATGAGTTGCTGTGAGCAAAGAGTTAGACCATTTTGCTTACTGTT-----TTCAGAGCCTTGCC
AGCAATCCAAGTTTTGAC--------------------ATGGACTTGTATGTTGTATCCGAGAAGTAAAAAA--AAATGC
ACTGGTATTTATTTTTGAAACAGAGAACTGCAGG---------AACAGTAAACTTGATTTGTACAAGTGAGAGATGAGGA
GGATATATAGAGGCAGAGCTGATCCAAGCCAGTTGCAGTCTTTGGGGCTGAGAGGATTAACCTGTTGTATACATTGTGGA
ATAT---TATGTTG------------------------------------------------------------------
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-----------------------------------------TTATCAGAGAGAACCTGACTGACTTGTATCATCATCATC
ATGTATACCTG-------------------TATCCTCTGTGGATTGACATGTACATTGACCAGTAGGTAAAAGTATATGG
AGTGATGGCCCGTATCATCATCATCATCATCATCATCATCATCATGTACACAGTAGCCCGTTCCGGTCGTATTTCTCTCT
CTAGATATGGAGTGATGGCAGGCATAGGAATGATATGTTGAGGTTAGTCTTGTGAAACTAATGTTGCAGTTGTTGTTTGT
TGTAGACTGAGCATGTCTGTTTTATTTCTTTGGG-TTTCGTTCGGCATCTCAATAAGTACATGTCTGTTTTAGTTTATGA
GTTG---TTTCTTTTCTTTCTTGTGAGCTATAAATAAATGTCAAATAGTATTATCAACCTTGGGAAATATTATCAACATT
TACTCCTCTGTCACATATTAACCGACAGATAAATGGGAATCGGCTT-----TAGCATAGTCTGATCTGATGTACTAGAAT
TTAGTTCCAAT-------TTTGAATTTTAGGCATTAGCTTTGGTGGTGCTGTGCTGTGCTGTGCTGTGCTGTGTAGGTTT
GGTGGTGCAAGATGACGGCGTCGTCTTGCTGCTGCTTCCGACTG------------------------------------
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>chr2D_1
TAGACGATGGATCCATGCATGTTGGCATGGTAAAAGGATAATCTCCGTTGATTAT------------GAGCTTTCTAGAA
GCGAGGAGATTCATTCTGACTTG-TTTTGTCTTGTTTCATCACTCTCTTCATAGTGGATGTTTCATCACTCTCTTCATAG
TGGGTGCCTACTTCTCTCACCTAGTTGCTCACGACTGAAACAAACAGGTTGGTTGCGGCTCGTCG--GAGCCACATCTCA
TACTAGATTGAGAGCATGCCAGACTTCTCGACCGAGGGAGGAGTATGGAAGTGGGGTGAGGCAGGTGAGGAATTAGCGGA
GCAAGGTGGGCGCCATGGTGCATGAAACGCGATTAGGGGCATTGCAAAAACAAAAACAAAAACACTTACCGACGGGGATG
TTAGGGATTCACGGGATCACACGATGC-TAGGGGGCAGTGGCTGCGCTGCAGGGTGGGGCGG-GGCGTCCATGTCGTGCA
TGTTGGCGGCTCCATGCAATGAACGAAGGCGGTGCCAGAGGAAATAGTCGGGCAACGCTATCTAGGTCAAAGCGTTCGGG
CAAGGGGTGGCAGGCCGTCGAGCGGCTTCGGAGCGAGGCGATCCCACTGGGTGAGGATAACCCGCTTTAAAAAAAAA---
------------------------------GATAACCCGCTTACATCATCTTGTTATACTTGCTTTTGCTCTTCATGGAC
GATGGGCTCTTTCCGGAGACATCTAGAAATAAGTAAGGAGAATACTTCCGAAATCTGTTCGGCTTGTTAGGACTATAGTA
TAAATTACCCCAACCACCAAGACAGACGGCAATTTGATCTCACAACTACCCAAATTTGCCTAAAGTAATTGCTCCAAATA
TTTGCCAAATTTTGAAAAATATTTAAACACACAAGCTCAACTTTGTTTCCCCATCCACCCAACCCAAACCCTAGAGAGA-
AAAAAAGGAAGGAAAAAA-TCAGCAAAAAAAGAGAGAGAAAATGCGCCGCCGTTGTTCGCCGTCGTGACCCCGCCGCCGG
CGAGGCCTCCCCCGCGTCCATGGATCTTTCCGCCGCAAGCGCCCTCGCCGTCCTCAGCAAGCTGCAGCTCCTCGGCTTCT
GCGTCGGCCTCCAGATCCCCGACGACGCCGCCGACCCCTCCGAGGTGTTCGACACCATCCTCGCCGCGTTCCTGGGCGAG
GTCTACCCCGGCGAGCGCGATGCGCGCCCGCTCCCGGCCGCCCTCGGCGACGGGCGCCGCGTGGACCTCTTCCGCCTCTT
CACCGCCGTCCGCGCCGCCGGCGGCTACGCCGTGGTCTCGTCGCCCTCTG------CCGGCGTCTGGGCCGCAGCCGCCG
GATCCGCGGCCCTCGCCGCGCCCGTCAAGCTGATCTATGCCAAGTACCTCGGCGCGGTGGAGCGCTGGATCCAGAGGCTC
CCGGAGGCGCAACCACCGCCGTCTGACGAGATGCGGCAGGAGC---TGCTCTGCGTCCGCGGTGCCAATGGAGTTGAGAT
GGAGGA------------CTGCAATGGGAGGGATCAGCGGCATGGCGCGCTCAAGAGGAAGAGGGAAGACATTGCTGGGA
TGCTGGATTGGGTGAGGGGGCTCGCCGAGACTGTCTCGGAGGAGGGCGCCATCGCTGCCGGGTTGGCGGATGGATACTTT
CCGGTGGCATTGGCGGCGCGGGAGGCGGTGTCCAGGAAGAGGGCACGCCGCGCAAGCGTGACCAACGGCGCGCTCTTGCA
GGTGATTCCGACACCTTTGATAAACTTGTTGCTGAAGATAATGTTTGACATATTGGTATTGCATCACTGCACTGCACTGC
ACATATATAGACAGACATACATACAGAATTGGCATTGGATTACTTCAGCAATACATACATACATACAGAGGAATATTGTT
AGCTGGCAACATCTATCTGTATCCCTTTGATCTTCTACATTAGTTTAGGCCCTGTTTCGATTGTCGTTTTCCTTTTAAAT
ACCCCTGT---AAAAGATAC-------ACCGAAGGATAAGATTGTCGTTTTGTTTCCAGCTGAAATTTGCCCGTGGTCGG
TAATTTAAA----------------------------------GGCCTTAGTGCCACTGGACTGTACTAGTGGAGATCCA
CATGTTAGATAATTTGTTCTATTTCCCCTAAACATAAGTAAAAT----TAAAATTCATGCTTCAGGTCTTACCAGTCTTT
TCATTAGTGCTTTAAG----GCCTGAACACCC-TTGTAAATTTATTATTTGGCTAGCTACCCTACAAATGGAGCATTGCC
GTTCCTTTTCTTTCTAATTTTGATTGTGCAGATTGGATGCTGGTAAAAGAGCATTTAGAAGAGTATTTAAAAGGAGCAT-
TTAACTACTTCTATCTTCATTTTGGTGACGTGGTATATAGTTCGGGCAAAATGTGTCAACTTCCCATTTGCTGTCTTGAT
GTGTTACAACCTCTGGAGGGATACACGGATCCT----ACCAGAGGGCAAAATCTGGCCTAACCCTGCTTAAGCATTACAC
TGTGCACAATTTAAGCTACAGTATCTTTGCTCCCTGATGTTCGCT-CATGTATCATTGGGATGACGGATACTATAAATAG
AGCTATGAAATCTCCCTGATGCTTTGGCCCCGGATATTACCTGTCGGGTACTGTGGGTGGTGGAAGGGGCCAGCAGGGAG
AGATATAGAATGGAGGGGTTGGAACTTTTTTTTTGTCTGCTTCATTGCCTTAAAGATGATAGTCCTCTATAAATAGAGCT
ATGAAATCTTACCTTTCTGGCTAAGCCGATTACTTGGCAACTGGATACACTTCTTATTCATAGTAACTGAACG--TTTTT
TTTCTGATGGCGCAGGAAATTGGTTGCAGGTGCTGCAGGAGTACCACCTGTGCCAGAATTGGTGTTCAATGCAGCAAAAT
TGTTCAACAACCTGGTTCGGATGCTAATAAACTAACAAGAGTTGTTGATGTGAATGGATCCTCAACGGTCATAGAACAGG
CGAGCAGTGTGAACGGACAGTTGAAGCATTCTAAAAGTCAGCAGAGGAACAAACTACTAGTGGGCTCCAATTATCAAGCA
GTGGTGCCACAGTGGACCGGCGTTCCGCCTGAAAATTACGGCGATCCGGAAACCCTCAAATGGCTGGGCACAAAAATCTG
GCCTCCAGAAAATGAGAAGAAAATAACCCCAACCTACCATGACCGTATTGGCAAAGGCAGAGAATATGTCTGCAGCTGCA
ACATCCCGCGATCAGTAGAATGTGTCAGGTTTCACATTGCAGAAAGGCGGCTTCAGCTGAGACGTGAACTCGGCTCTGCT
TTCTACCAGTGGGGATTTGACCGTATGGGCGAGGAGGTTGCCCTTTCTTGGACGGATGAAGAGGAGGCAAGTTTCAAGGC
TGTAATGCAGACCTATGCGCCATCTCCAGCAAGGAATTTGTGGAACCATCTCCAGTCATCCTTCCGCTGGAAGCCGAGGA
AAGAACTTGTGAGCTATTATTTTAA-------TTGTTTTCTGCTTAGGCGGAGGTGTTACCAGAATAGGACCGCACCAAA
GAAGATAGATAGTGATGATGAGGAAGAGACAGAGTTTAGGTTTTTGGGAAACCGTATGGGACAAAGTGCAACCAAGTATG
ACAGCACCAAGCGCACCGTTTGCATCCAAAGGACTCACTGCATGGATCTGGATGATGAGTAGTTGCTGATTGATTACATT
CTAGGAGGCTGGTTGAAGTCTGTTAAGGAGTTTGGATTTATAAATGGTC---CCCATTCATTGATTTGGT--------T-
-------GACATTGCACATGAGTTGCTGTGAGCAAAGAGTTAGACCATTTTGCTTACTGTCTTGTCTTCAGAGCCGTGCC
AGCAATCGAAGTTTTGAC--------------------ATGGAC-------TTGTATCCCAGAAGTAAAAAAAAAAATGC
ACTGGTATTTATTTTTGAAACAGAGAACTGCAGGGGAGGCCCCAACTGTAAACTTGATTTGTACAAGTGAGGGATGAGGA
GGATATATAGAGGCAGAGCTGATCCAAGCCAGTTGCCATCTTTGGGGCTGAGAGGATTAATATGTTGTATACATTGTGGA
ATAGTA---TGTTG------------------------------------------------------------------
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-----------------------------------------TTATCGGAGAGAACCTGAGTGAGTGGT------ATCATC
ATGTATACCTG-------------------TATCCTCTGTGGATTGACATGTACATTGACCAGTAGGTAAAAGTATAACT
G------------------------------------------------ACAGTAGCCCGTTCCGGTCGTATTTCTCTCT
CTAGATATGGAGTGATGA----CATAGGAATGGTATGTTGAGGTTAGTGTTGTGAAACTAATGTTGCAGTTGTTGTTTGT
TGTAGACTGAGCATGTCTGTTTTATTTATTTGGGGT----TTCGGCATCTGAATAAGAACATGTCTGTTTTAGTCTATGA
GTTG---TTTCTTTTCTTTCTTTTGAGCTATAAATAGATGTCAAA---TATTATCAACCTTGGGAAATATTATCAACATT
TACTCCTCTGTCACATATTAACCGACAGATAAATGGGAACCGGCTTTAGCATAGCATAGTCTGATCTGATGTACTAGAAT
TTAGTTCTTTGGTG----------------------------------------------GTGCTGTGCTGTGTAGGTTT
GGTGGTGCAAGATGACGGCTTCATCTTGCTGCT-----------------------------------------------
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>chr2D_2891
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----------------------------TTCTACAACTCAGCGAAGGAATAAAATACTAGTGGGCTCCAATTATCAAGCA
G-GGTGCCACAGTGGACCACGTCCTA-CCTGCAAATTGCGATGATCCGAAAACCTTGAAATGGTTGGGCACAGAACTCTG
GCCTGCAAAATACAAGAACAACAAATCACCATTTTACGTTGACCCAATTGGTGAAGGCAGTGAAGATGTTTGCAGCTGCA
ACGTTCCAGGATCAGTCGAATGTGTTAGGTTTCATATTGCAGAAAGGCGACTTCAGCTGAGACGTGAACTCGGTTCGGCT
TTCTACCAGTGAGGATTTGATCGTATGGGTGAGGAGATCGCACTTTCGTGGCA-GATGAAGAGGAGGCAAATTTTAAGGC
TGTAATGCAGAACAACATGCCATTTTCAGGAAGAAATCTATGGAACCATCTCCACTCATCATTCCGCTGGAAGCGAAGGC
AAGAACTCGTGAGCTATTATTTTTTATTTAATTTGATTTCTGCTTAGGTGGAGGTGTTACCAGAATAGGATCACACCAAA
GAAGATAGATAGTGATGATGAGGAAGAGACAAAGTTTAGATTTTTAGGAAACCGTCTTGGGCAAAGTGCAACCAAGTATG
ACAGCACCAAGCGCACCGTTTGCATTCAAAGTACTCACTGCATGTC---------------GTTGCTGATCA---ACATT
CTAGGAGGCTGGTTGAAGCCTGTTAATTCCAGTTTTCTCCCTCCCTGTTATGCCCATTCAATGATTTGGTTATGCCCAT-
-------GACATTGCACATCAGTTGCTGTGAGCAAAGAGTCAGACCATTTTGCTTACTGTT-----TTCAGAGCCTTGCC
AGCAATCGAAGCTTTGACACTGATCTGTCAGCTCTCATATGGAC-------TTGTATCCCAGAAGTAAAAAATGCACTGG
---------TATTTTTTGAACAGGGAACTGCAGGGGAGGCCCCGACAGTAAACTTCATTTGTACAAGTGAGAGAATGGGA
GGATATATAGAG------CTGATCCAAGGCAGTTGTAAT-----GGGCTGAGAGGATTAACAA---GTATACATTGTGGA
ATAGTA---TGTTTAATGTTCAAAAAAGCAGAAAGCGTAAACGAAGCAGAAGGCCACAGCTTAGAGCAATGGGCGCTTAA
GCGTTTTATGAAATTGGCTAGAATTTGACAGATTTTGAATAATATACACAGTAAAGTAGGAAACATGGCACATGGGTAAT
TGATATAGCATCTAAAATACAATTCACACCATAGCAAATACACTTCAGGTTCACATTAGCAAGCAAAATAACAACTAAAA
TGCAGTCCAGTTCAAATAGTCATAACCTAATATAGATCATGTGCCAGAATTCTGCCAGAATATGAATGAAATAGTTCCCG
AACAGAGTCTAATAATAAGATAAATGGCATATTGCCATTATTGCGCAAGCAGACAAGCAAAAGCAGTTCAAAACCAGCCA
AATTTAAGAAAAAAAACGCTTAACCTACCGCTTAGGGCAAAAGCTAAGCAGTTTGCCATCGCTCAGCGCTTAAGCACGCT
TAAGCGTCGCTTAAAAACGCTTTCTTGAACACTTAATGTTATTATAAAAAAGAACCTGACTGACTGGT------ATCATC
ATGTATACCTGCTTTCATCCCCTCACTTTTTATCCTCTGTGGATTGACATGTACATTGACCAGTAGGTATAAGTATAACT
G------------------------------------------------ACAGTAGCCCGTTCTGGTTGTAT--------
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>SNPs
-----------------S-------------------------------S------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
---------------------------------S-------------------------S------------------S-
S-----------------S----------S---------------S---S------------------SS---S----S-
---------------S-----------------------------SS------S----SS------------S-------
-S----S----------------S-S--------------S-----------------S--------------S------
-------------S----------SS---SS-------------------SS--------S-----S--S-S--------
---------S---SSS-----------------------------------------S----------------------
-------------S----S------------------------------------------S------------------
--------------------------------------------------------------------------------
S------------------------------S-SS---------------------------------------------
------------------S---S--------------------------------S------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------S-----
--------------S-----------S-----------------------------------------------------
------------------S---------------SS--------------SSSSSS------------------------
----S--S------------------------------------------------------------------------
------------------------------------------S-------------------------------------
----S---------------------------------S---S--S-S---S----------------------------
-------------------------------------------------------------S----S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------SSS---S-S------------
--S-----------------------------------------------------------------------------
-------SSSS--------------S-------S----------------------------------------------
---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S-----S-------
-S------------------------------------------------------------------------------
------------------------S--S----S-------------S-------------------------------S-
--------------------S--------------------------S----------S-SSS-S---SSSSSS-SS-SS
------S-S--S-----------------S--S-----S-S------------------------------S-SSS-S--
------------------------------------------------------------S-------------------
----S------S----------------S-------------SSSS--------------------S-------------
-----------------S----------------------------S---------------------------------
--------------------------------------------------------------------------------
--------S-------S---S--------------S-----------------S------------------S-------
--------------------------------------------------------------------------------
----------------S------------------------------------------------S--------------
-----------------------------------------------------------------S--------------
-----------------------------------------------S--------------------------------
-----------------------------------------------------------------SS-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S---------------------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------S----------------------------------
------------S----------S--------------------------------------------------------
------------------S---------------S--------------------------------------------S
SSSSSSS-----------------SS------------------------------------------------------
-----------------S--------------------------S-----------------------------------
----------S--------------------------------------------SS-----------------------
------------------S--SSSSSSSS-SS------------------------------------------------
------S-------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------S----------------------------------------S---S--
----------------------------------------------------S---------------------------
------------------------------------------------------------S-----S-------S-----
--------------------------------------------------------------------------------
----SSS----------------------------------------S---S-S-SSSSSSSSS-S-SS-S---------
---------------S----------------------------SS----------------------------------
S---------SSSSSSSS----------S-----------------------S---------------------------
--------------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS
>forward_739
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-------------------------------------------------------------------------------C
GATGGGCTCTTTCTGGAGG-------------------------------------------------------------
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>reverse_1566
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---------------------------------------------GGTGCTGAAGAGGAAGAGGG---------------
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>forward_1559
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--------------------GCAATGGGAGGGATCAGCA-----------------------------------------
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>reverse_3026
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-----------------------------------------------------------------TGGTCATAGAACAGG
CGAGC---------------------------------------------------------------------------
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>forward_2121
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---------------------AAATTACACCGACGCCAAGC---------------------------------------
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>reverse_3693
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------------ACACCGTTTGCGTTCAGAGT------------------------------------------------
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>forward_3599
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-----------------------------------------------------------CCAGAATAGGACCGCACCAG-
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>reverse_5229
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----------------------------GGGCATTAGCTTTGGTGGTG--------------------------------
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-------------
