>input_sequence_30838
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-------ATGGGGAACTGCATGAAGTCCACGGCCCGGGTGGATCACAGCATGAACACTAGTGCCGCCTGTGAGTGCCTCT
CTTACCACTTGCCCCCTAATTTTGGTTT----------------------------------------------------
-----------------------------------CTCTGTATTTTTCAGTTTC---TACTTGCTCCCTGATTGGCATCT
TTTTTGTTCGATTGATTGGGTTGTTTTGGTTATTCGTACTG------GTAGTAATTCTTGGATTTGGTTTGTGTTGATTT
GGTTCGATGGTAACCTTGTCTGGGGC-AAAATTTGGATATCATGTT---GTGCATCTTACACTTCTATTTCTGTCACTAG
TTTTAG-CTACTTTGTTA--CTCTGGTGCACCTTCGCCTCTATTTTTGCT------------------------------
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------------------------CCCCTTCCTTATCAGGGTAAGCATAG--------CATGCCATGCTGCATGGATAAG
AACATTATTTTCTTCCTAGGTTTGATATACTTCAAATTTCACGGTAGCAAATGAAACTAAAGTTATTTAATTCAGAGTTT
CAGATAGCAGAGAGCTACTTCAATTCACATGTTCAGTATCATTGTAAACCTGAAGATGTTATTGTTGCCAATTTGTTCTT
ACACACATTTCCTTTGTTTCCTGTTGGGTCATCAGATCCATCGAAAGTGACCAGCAAAACAAGCATGTCATCTGCTACTT
CTGCGAGCAAGACCAACTCAACTCGTTCAACGTTTACTCTGCCATCTATAAGAGATCGCAGCGAGCCGCCTCGGACAGAA
GGCGAAATCTTGTCATCGTCGAACTTGAAGGCTTTCTTGTTCAATGATCTTAAAAATGCGACCAAGAACTTCCGCCCGGA
CAGTCTTCTTGGGGAAGGAGGGTTTGGGCATGTTTTCAAAGGTTGGATTGATGAACACACTCTTGCTCCTTCGAAACCGG
GAAGTGGTATGGTTGTTGCTGTGAAGAAGCTTAAACCAGAAGGTTTCCAAGGGCACAAGGAATGGCTGGTAGGTTCAGGA
CTCCTTAAAAATATTTTTCTACTTTCCTCTGGCTATTTTTCATGTTTCCTGATGGTTAATTTTCCTGCTCAGACGGAGGT
TAACTACCTTGGCCAACTTCACCATGCCAATCTTGTTAAGCTCATTGGTTATTGCTCAGATGGTGATAACAGACTTCTGG
TGTATGAGTTCATGCCCAAGGGAAGTTTGGAGAATCATCTGTTCAGAAGTATGTTCTTTAATCTATATGGGTTTTATTGC
TAAATCATTGATTTCTGACATCTTTAATATTCGTGTGTCAACTATCAAGTAACCAATAATGTTTGTATTCTTTTAGGAGG
TGCTGATCCTTTGTCATGGGGAATAAGGCTTAAGGTTGCTATCGGGGCTGCTAAGGGTTTGTCATTTTTACATCATGCTG
AAAACCAAGTTATATATCGTGATTTCAAGGCATCAAACATTCTTCTTGACTCGGTATGGTTGAAATATAATGTTGACTCT
GATTACAAGACAACCTTTGGGGTCTTTTAACTTAACTTGTTACTCTTGATTCAATGCAGGAATTCAACGCCAAGCTTTCA
GATTTTGGATTAGCGAAAGCTGGTCCAACTGGGGATAAAACTCATGTTTCCACACAAGTGATGGGCACCCATGGATATGC
AGCTCCAGAGTATATCGCAACAGGTTAGAATATTATCTTTGTGTTTGTATTTACAAAAATGGGGCGATGTCTCCCTTTTT
TCTGTGTCATGTGACATCAGTTTTGACAATA-GATGTTGATGTTGGGTCTTCTCTCTGTATTAGCTAAACCTCTGTTGAA
TTATTTTCCGGCCTAAATCATCCCATACCTA-----------TGACAGAGTCATGGTGAAGCCCTATTTGTTTAAAGTAG
CATAATCATATCATGGTGTTCTCCAATCATGCAGACCATCATGGAATTGTTTCCTGATCTCCCTCGATAGTCAACG-CAC
TTGCCTTCTGTTTTGTCTACATTTCCTGATCCAGCAATTTCATTGTTATATATGTCAAGTCAAACTAATATTAAATGTAA
GAAATGTTCCACTCCACTT--TATTCCTATTAAATTCGACACTGGCCATATTTTTCTTGGATTTTATAAAATGACAGTAC
ATATGAACATGTATTG-------------------------------------T-----------TTATTTCTGGATAAA
CCCATTCTCATGTTACTTAAAATTTACAGGTCGCCTCTCTGCAAAGGCAGACGTCTACAGCTTCGGGGTGGTGTTGCTTG
AGTTGCTGACCGGGAGACGAGCTCTGGACAAGTCGAAGCCCGGCATAGAGCAGAACCTAGTGGACTGGGCCAAACCGCAC
CTGCGAGACAAGCGCAGACTGTACCGTGTCATGGACACGAAGCTGGGAGGCCAGTATCCTAAGAAAGGCGCACACGCCGT
CGCGAACCTCGCCTTGCAATGCATCTGCAACGACGCCAAGATGCGGCCGCAGATCTCAGAGGTCTTAGAAGAGCTGGAGC
AGCTCCAAGACTCCAAAAGCAATATAGTGTCGCCGCAGGTTGACATCCGGAGGACCTCCAACACCGTCCCGAAGTCGCCA
ATGAGGGGCCAACCCTCGCCGCGGCGCTCTCTTGGAGCGATGGCGCCGCCGTCACCGGCATTTAGGACCGCGCAAGTGCA
CTAG----------------------------------------------------------------------------
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>chr4D_1_TraesCS4D01G286100
TTTAATACTTTTGGGTTTAAGCGGCTAAATGGAGTGTAATTGGAATTGCATATTAATAGAATAATTATTAATGCTTGTGT
TCTTCCAATTA--TGTGTAGCAACTCGAATCCCATACTTTTGGCTTTAAGGAAGTAGGA---GTAGCAATCAACAACCAA
TTCATGGCAAAAGCATA-TTGACTGGTCTACCATTCTGTTCTTGCTTAAAGCCCCCTGTACAATCTCAGAGTTT------
---------------TACATCCACACGAGTCTTCTCTGCACAGGGGGCAAAGAACAAATACTGAAATACGTCGAGGTCCT
GCATGTAAAGTTGCCGCCACCAACGTGTAGAAGAGAGAGACAGGGGCGGAAGATCCCACCACCCGCCGCTCTCATTCGCA
GCTCCGTTCCCACCTGAGCCCAGCCGGTCGGTGGCTGCCGGCAGCAACCTGCTACTACCTCCGTTGCTCCTCCTCCCTCC
----CCTCCCACTCCCTCTCAGCCCCAGCTCGAGCGAGAGAGCATCTCCCTTCCGAGCGACCGCGTCCGCCTCCCTCCCC
TCCCCTGCCCCCCCGTGCGGTTCTTGGTGACGGCGCGGCGGCTTGGCTGGCCGGCCTCGCCTCCAGTTGACCCGACTGAC
TCTCCCCCATTCGGTCAGCCCGGAGGAGGAGGAGGAGGCGGAGG---------GGATTTGATTGACTTTTTGAAGCTTCT
CGCCTGTTTCTCTCCTGGCGTTGCGGCTGCCGGCCAACGGCCTC-GCGGATTTTTCTCCAGTCTCATCCCCCCCTTCAAG
TGGCGGCGGAGATCAGCTGGACCGAAAAAGCCTCGCCAGAAACCGGCTGGGACTCTAGGGTTGGCTGCTCAGCTCAGTTG
TCTTCGGCGGCTGCTCCTCCTGATCCCTCCTGTTGCCGCGGGCCAGCTCTCTCTAGCTTCGCTGACTTGACCCGGGACGG
AGGAGAGAGGAGCGGAGTTCGCCTGTGGATCTTTAGGAAAGGAAGCTCATTCG------TCCTGTCAGCTGGGAGGTAGA
GGAAGAGATGGGGAACTGCATGAAGTCCACGGCCCGGGTGGATCACAGCATGAACACTAGTGCCGCCTGTGAGTGCCTCT
CTTACCACTTGCCCCCTAATTTTGGTTT----------------------------------------------------
-----------------------------------CTCTGTATTTTTCAGTTTC---TACTTGCTCCCTGATTGGCATCT
TTTTTGTTCGATTGATTGGGTTGTTTTGGTTATTCGTACTG------GTAGTAATTCTTGGATTTGGTTTGTGTTGATTT
GGTTCGATGGTAACCTTGTCTGGGGC-AAAATTTGGATATCATGTT---GTGCATCTTACACTTCTATTTCTGTCACTAG
TTTTAG-CTACTTTGTTA--CTCTGGTGCACCTTCGCCTCTATTTTTGCT------------------------------
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------------------------CCCCTTCCTTATCAGGGTAAGCATAG--------CATGCCATGCTGCATGGATAAG
AACATTATTTTCTTCCTAGGTTTGATATACTTCAAATTTCACGGTAGCAAATGAAACTAAAGTTATTTAATTCAGAGTTT
CAGATAGCAGAGAGCTACTTCAATTCACATGTTCAGTATCATTGTAAACCTGAAGATGTTATTGTTGCCAATTTGTTCTT
ACACACATTTCCTTTGTTTCCTGTTGGGTCATCAGATCCATCGAAAGTGACCAGCAAAACAAGCATGTCATCTGCTACTT
CTGCGAGCAAGACCAACTCAACTCGTTCAACGTTTACTCTGCCATCTATAAGAGATCGCAGCGAGCCGCCTCGGACAGAA
GGCGAAATCTTGTCATCGTCGAACTTGAAGGCTTTCTTGTTCAATGATCTTAAAAATGCGACCAAGAACTTCCGCCCGGA
CAGTCTTCTTGGGGAAGGAGGGTTTGGGCATGTTTTCAAAGGTTGGATTGATGAACACACTCTTGCTCCTTCGAAACCGG
GAAGTGGTATGGTTGTTGCTGTGAAGAAGCTTAAACCAGAAGGTTTCCAAGGGCACAAGGAATGGCTGGTAGGTTCAGGA
CTCCTTAAAAATATTTTTCTACTTTCCTCTGGCTATTTTTCATGTTTCCTGATGGTTAATTTTCCTGCTCAGACGGAGGT
TAACTACCTTGGCCAACTTCACCATGCCAATCTTGTTAAGCTCATTGGTTATTGCTCAGATGGTGATAACAGACTTCTGG
TGTATGAGTTCATGCCCAAGGGAAGTTTGGAGAATCATCTGTTCAGAAGTATGTTCTTTAATCTATATGGGTTTTATTGC
TAAATCATTGATTTCTGACATCTTTAATATTCGTGTGTCAACTATCAAGTAACCAATAATGTTTGTATTCTTTTAGGAGG
TGCTGATCCTTTGTCATGGGGAATAAGGCTTAAGGTTGCTATCGGGGCTGCTAAGGGTTTGTCATTTTTACATCATGCTG
AAAACCAAGTTATATATCGTGATTTCAAGGCATCAAACATTCTTCTTGACTCGGTATGGTTGAAATATAATGTTGACTCT
GATTACAAGACAACCTTTGGGGTCTTTTAACTTAACTTGTTACTCTTGATTCAATGCAGGAATTCAACGCCAAGCTTTCA
GATTTTGGATTAGCGAAAGCTGGTCCAACTGGGGATAAAACTCATGTTTCCACACAAGTGATGGGCACCCATGGATATGC
AGCTCCAGAGTATATCGCAACAGGTTAGAATATTATCTTTGTGTTTGTATTTACAAAAATGGGGCGATGTCTCCCTTTTT
TCTGTGTCATGTGACATCAGTTTTGACAATA-GATGTTGATGTTGGGTCTTCTCTCTGTATTAGCTAAACCTCTGTTGAA
TTATTTTCCGGCCTAAATCATCCCATACCTA-----------TGACAGAGTCATGGTGAAGCCCTATTTGTTTAAAGTAG
CATAATCATATCATGGTGTTCTCCAATCATGCAGACCATCATGGAATTGTTTCCTGATCTCCCTCGATAGTCAACG-CAC
TTGCCTTCTGTTTTGTCTACATTTCCTGATCCAGCAATTTCATTGTTATATATGTCAAGTCAAACTAATATTAAATGTAA
GAAATGTTCCACTCCACTT--TATTCCTATTAAATTCGACACTGGCCATATTTTTCTTGGATTTTATAAAATGACAGTAC
ATATGAACATGTATTG-------------------------------------T-----------TTATTTCTGGATAAA
CCCATTCTCATGTTACTTAAAATTTACAGGTCGCCTCTCTGCAAAGGCAGACGTCTACAGCTTCGGGGTGGTGTTGCTTG
AGTTGCTGACCGGGAGACGAGCTCTGGACAAGTCGAAGCCCGGCATAGAGCAGAACCTAGTGGACTGGGCCAAACCGCAC
CTGCGAGACAAGCGCAGACTGTACCGTGTCATGGACACGAAGCTGGGAGGCCAGTATCCTAAGAAAGGCGCACACGCCGT
CGCGAACCTCGCCTTGCAATGCATCTGCAACGACGCCAAGATGCGGCCGCAGATCTCAGAGGTCTTAGAAGAGCTGGAGC
AGCTCCAAGACTCCAAAAGCAATATAGTGTCGCCGCAGGTTGACATCCGGAGGACCTCCAACACCGTCCCGAAGTCGCCA
ATGAGGGGCCAACCCTCGCCGCGGCGCTCTCTTGGAGCGATGGCGCCGCCGTCACCGGCATTTAGGACCGCGCAAGTGCA
CTAGAAGCACAGCTTAGAAGTGGGAGAGAGATGTATCCGTACGGCTGTACATTTGGTGGTGAGCTGTGTAATAGTTGTTT
CTAGTGATGCTTCTTGCTCATTTGTAGGGTGTGGCACGGAATATGACTACGGCACTCTGTGATGAATTGTTTTTCACCAA
GCCTGAGAGGTGTGCCTCACTGGGTTCTGTTCTGGTCCATTCTCATCGCGGTGCCGGGTTTATCTTCTGCGACATGATAG
AAACTGGATGATTTGTTGTTGACATGATAGAAACTGTGGACAGTGAGCATTTCCAGGCTTGTCATTGGTTACCAAATTCG
TCGCCCAATTGTGCTCGATAAGAAACTGGCATGTTATCAGATAGGGTCTTGATGTTTTTTTTAA--TCACAGCTGCATAT
TTCTCAGGCAATTGCAATTCCTTTGTCCAGATAGGGATTAATATATGTAACATACAGGAAAGGACTCCCCTCTTGCAACA
TTATGCAACTGAAA-AAGATAAAATGGAAAAATGAGCCTTGAATTTCAGGAATGTACAGATACTAGACGTATGTCTCTTG
GGTTTAGTGATGATTTGATGAACTTGCACAAATTTGTTGTGGAGAACAAAAACAGCAGCGATGAGCATGCCAGCCTGCTA
AGGCGGGTAAATGTCACAGTGTGTCTCATTTCTCGACAATAAACTCCTGAATCTCTATTCCAGTGTGACGGGCGCCGCCC
TGCTTCCTCACCAGAACTTCGTCGCCAACTTTCAGTGAAGTCACAGGAATAGCAGTCCTTCCACCAGATCCTACATCAGA
CAATCATACAACTCGGGAGTAAGTTGGTCAAGAAAGACCGATGATAAACCTTGAATCCTTATCTGAAGTTCTGAACCTTA
ACTAAATCTAGGGGAGTATCAGAGAACTCAGCAAAAACATTGCAGTGGTTGTACGATA----------------------
--------CCCCCACGATGGTTTTAAAGGTTTCCTTTTACTACAAAACTTTGTACTCAGTTGATTTCCAGAGTTGTA
>chr4A_1
TTTGATACTTTTGGCTTTAAGCGGCTAAATGGAGTGTAATTGGAATTGCATATAAATAAAATAATCATTAATACTTGGGT
TCTTCCAATTATGTGTGTAGCAACTGGAATCGCATACTTTTGGCTTTAAGGA------A---GTAGCAATCAACAACCAA
TTCATGGCAAA-GCATATTTGACTGGTCTACCATTCTGCTTTTGCTTAAAGCCCCCTGTACAATCTCGGAGTTCACTTCC
ACCACCATCCAAGCGTAC----------GTCTTCTCTGCACAGGGGTTAAAGACGGAACACTCAAACATGTCGAGGTCCT
GCACGCAAAGTTGCCCCCACCAACGTGTAGAAGAGAGGGACAGGGGCGGAAGATCCCACCACTCGCCGCTCCCATTCGCA
GCTCCGTTCCCACCTGAGCCCAGCCGGTCGGTGGCTGCCGGCAGCGACCTACTACTACCTCCGCTGCGCCCCTCAGCAGC
TCCTCCTCCCACTCTGCCGCAGCCCCAGCTCGAGCGAGAGAGCATCTTCCTCCCGCGCGGCCGCGTCCGCCTCCCTCCCC
TGCCCTG--CCCCCGTGCGGTTCTTGGAGGCGGCGTGGCGGCTTGGCTGGCCGGCCTCGCCTCCAGTTGACCCGACTGAC
TCCCCCCCATTCGGTCAGCCCGGAGGAGGA---------GGAGG---------GGATTTGATTGACTTTTTGAAGCTTCT
CGCTTGTTTCTCTCCTGGCGTTGCGGCTGCCGGCCAACGGCCTCAGCGGATTTTTCTCCAGTCTCATCCCCCCCTTCAAG
TGGCGGCGGAGATCAGCTGGACCC-AAAAGCCTCGCCAGAAACCGGCTGGGACTCTAGGGTTGGCTGCTCAGCTCAGTTA
TCCTCAGCGGCTGCTCCTCCTGATCCCTCGCGTTGCCC---GCCATCTCTCTCTAGCTTTGCTGACTT-ACCCGGGGCGG
AGGAAAGAGGAGCAGAGTTCGCCTGTGGATCTTCAGGAAAGGAAGCTCATTCATCCTCTTCCTGTCAGCTGGGAAGTAGA
GGAAGAGATGGGGAACTGCATGAAGTCCACGGCCCGGGTGGATCACAGCATGAACACTAGTGCCGCCTGTGAGTGCCTCT
CTTACTACTTTTACCCCTATTTTTCTTT----------------------------------------------------
-----------------------------------GTGTCTATTTGTCAGCTTCTAGTACTTGCCTCCTGGTTGGCATCT
TTTTTGTTCGATTGCTTGGGCTGTTTTGGTTATTCGTACTGGTGGTAGTAGTAGTTCTTGGATTTGGTTTGTGTTGAACT
GAGAGGCGT---ACCATGTGTGGGGCAAAA-TTTGGATAGCATGTTGTTATGCATCTTACACTTCTGTTTCGGTGACTAG
TTTTTACCTACTTTGTTCCTCTCTGGTGCACCTTCGCCTCTATGTTTG--------------------------------
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----------------------TCCCCCTTTATTATTAGGGTAAGCATAGCATATTAGCATGCCATGGTGCATGAACTGG
AACATCAATTTCTTCTTAGGTTTGA--------------------------------------------------AATTT
CAGATAGCAGAGAGCTACTTCAGTTCACATGTTCAGTATCATTGTGAACCTGAAGATGTTGTTGTTGCCAATTTGTTCTT
ACACACATTTCCTTTGTTTCTTGGTGGGACATCAGATCCATCGAAAGTGACCAGCAAAACAAGCATGTCATCTGCTACTT
CTGCGAGCAAGACCAACTCAACTCGTTCAACGTTTACTCTGCCATCTATAAGAGATCGCAGCGAGCCGCCTCGGACAGAA
GGCGAAATCTTGTCATCGTCGAACTTGAAGGCCTTCTTGTTCAATGATCTTAAAAATGCGACCAAGAACTTCCGCCCGGA
CAGTCTTCTTGGGGAAGGAGGGTTTGGGCATGTTTTCAAAGGTTGGATTGATGAACACACTCTTGCTCCTTCGAAACCGG
GAAGCGGTATGGTTGTTGCTGTCAAGAAGCTTAAACCAGAAGGTTTCCAAGGGCACAAGGAATGGCTGGTAGGTTCAAGA
CTCCTTACCACTAATTTTCTACTTTCCTCCGGCTA-TTTTCTTGTCTCCTGATGGTTCATTTTCCTGCTCAGACGGAGGT
TAACTACCTTGGCCAACTTCACCATGCCAATCTTGTTAAGCTCATTGGTTATTGCTCAGATGGTGACAACAGACTTCTGG
TGTATGAGTTCATGCCCAAGGGAAGTTTGGAGAATCATCTGTTCAGAAGTATGTTCTTTAATCTATATGAGTTTTATTGC
TAAATCATTGATTTCTGACGTCTTTAATATTCATGTGTCAACTATCAAGTAACCAATAATGTTTGTATTCTTTTAGGAGG
TGCTGATCCTTTATCATGGGGAATAAGGCTTAAGGTTGCTATCGGGGCTGCTAAGGGTTTGTCATTTTTACATCATGCTG
AAAACCAAGTTATATACCGTGATTTCAAGGCATCAAACATTCTTCTTGACTCGGTATGGTTGAAATATGATGTTGACTCT
GATTACAAGCCAACCTCTGGGGTCTTTTAACTTAACTTGTTACTCTTGATTCAATGCAGGAATTCAACGCGAAGCTTTCA
GATTTTGGATTGGCGAAAGCTGGTCCAACTGGGGATAAAACTCATGTTTCCACGCAAGTGATGGGCACTCATGGATATGC
AGCTCCAGAGTATATCGCTACAGGTTAGAAGATTATCTTTGTGTTTGTATTTACAAAAATGGGGCCATGTCTCCCTTTTT
TGTTTCATGTTACAAAAATGGGGCC--------------ATGTTGGGTCTTCGCTCTGTATTAGCTAAACCTAAGTTGAA
TTATTTTCCGGCCTAAATCATCCCATATCTATGACAGAATCATG-----------GTGAAGCCCTATTTGTTTAAAGTAG
CATAATCATATCATGGTGTTCTCCAATCATGTAGGCCATCATGGAATTGTTTCCTGATTTCCCTTGATAGTCAACTACAC
TTGCCTTCTGTTTTGTCTACATTTCCTGATCCAGCAATTTCTTTGTTTTATATGTCAAGTCAAACTAATTTTAAATGTAG
GAAATGGTCCACTCCACTTTATATTCCTATTAAATTCGAGACTGGCCATATTATTCTTGGATTTTATAAAATGGCAGTAC
ATATGAACATGTATTGATAATATTGTGCGTAAGAAATAAATGAAATCTAAATGAATATGCATTGCTTATTTCTGGATAAA
CCCATTCTCATGTTCCTTAATATTCACAGGTCGCCTCTCTGCTAAGGCAGACGTCTACAGCTTTGGGGTGGTGTTGCTTG
AGCTGCTGACCGGGAGACGAGCCCTGGACAAGTCAAAGCCAGGCATAGAGCAGAACCTAGTGGACTGGGCCAAACCGCAC
CTGCGCGACAAGCGCAGGCTGTACCGTGTCATGGACACGAAGCTGGGAGGCCAGTATCCTAAGAAAGGCGCACACGCCGT
CGCGAACCTCGCCTTGCAATGCATCTGCAACGACGCCAAGATGCGTCCGCAGATCTCAGAGGTCTTAGAAGAGCTGGAGC
AGCTCCAAGACTCCAAAAGCAATTTAGTGTCGCCGCAGGTTGACATCCGGAGAACCTCCAACACCGTCCCGAAGTCGCCA
ATGAGGGGCCAACCCTCGCCACGGCGCTCTCTTGGAGCGATGGCGCCGCCGTCACCGGCTTTTAGGACCGCGCAAGTGCA
CTAGAAGCACAGCTTAGAAGTGGGAGAGAGATGTATCCGTACGGCTGTACATTTGGTGGCGAGCTGTGTAATTGTTGTTT
CTAGTGATGCTTCTTGCTCATTTGTAGGGCGTGGCACGGAATATGACTACGGCACTCTGCGATGAATTGTTTTTCACCAA
ATCTGAGAGGTGTTCCTAAACCCTAAACC------------CTCGTCGCGGAGCCGGGTTTATCATCTGCA---------
--------------------GACATGACAGAAACTGTGGACAGGGAGCATTTCCAGGCTTGTCATGGGCTACCAAATTCG
TCGCCCAATTGTGCTCGATAAGAAATTGACATGTTATCAGATAGGGTCTTGATGTTTTTTTTTTTGTCACAGCTGCATAT
TTCTCAGGCAATCGCAATTCCTTTGTCCAGATAGGGAAAAATATATACC---TACTGGAAAGGACTCCCCTCTTGCAACA
TTATGCAACTGAAACAAGATAAAATGGAAAAATGAGCCTTGAATTTCAGGAATGTACATGTACTAGATGTA---CTCTTG
GGTTTAGTGATGATTTGATGAACTTGCACAAATTTGTTGTGGAGAACAAAAACAGCAGCGATGGGCATGCCAGCCTGCTA
AGGCGGGTAAATGGTACAGCGTGTCTCATTTCTCGACAATAAACTCCTGAATCTCTATTCCAGTGTGACGGGCGCCGCCC
TGCTTCCTCACCAAAACTTCGTCGCCAACTTTCAGTGAAGTCACAGGAATAGCAGTCCTTCCACCAGATCCTACATCAGA
CAATCATACAGTTCGGGAGTAAGTTGGTCAAGAAAGACCGATGATAAACCTTGAATCCTTATCTGAAGTTCTGAACCTTA
ACTAAATCTAGGGGAGTATCA-----------------------------GAGAACTCAGCAAAAACATTGCACTGGTTG
TACAATGCCCCCCACAATGGTTTTAAAGGTTTCCTTTTACTGCAAAACTTCATACTCTGTTGATTTCCAGAATTGTA
>chr4B_4
---AATACTTTTGGCTTTAATGGGCTAAATGGAGTACAATAGGAATTGCATATAAATAGAATAATTATTAATGCTTGGGT
TCTTCCAATTA--TGTGTAGCAACTGGAATCGCATACTTTTGGCTTTAAGGA------AGAAGTAGCAATCAACAACGAA
TTCATGGCAAA-GCATA-TTGACTGGTCTACCATTCTGTTTTTGCTTAAAGCCCCCTGTACAATCTCAGAGTTCACTTCC
ACCACCATCCAAGCGTACATCCAGACGGGTCTTCTCTGCACAGGGGCTAAAGATGGAACACTCAAACATATCGAGGTCCT
GCACGCAAAGTTGCCGCCACCAACGTGTAGAAGAGAGAGACAGGGGCGGAAGATCCCACCACCCGCCGCTCTCATTCGCA
GCTCCGTTCCCACCTGAGCCCAGCCGGTCGGTGGCTGCCGGCAGCAACCTGCTGCTACTTCCGTTGCTCCTCCTCCCTCC
----CCTCCCACTCCCTCTCAGCCCCAGCTCGAGCGAGAGAGCATCTCCCTCCCGAGCGACCGCGTCCGCCTCCCTCCCC
TGC------CCCCCGTGCGGTTCTTGGTGACGGCGCGGCGGCTTGGCTGGCCGGCCTCGCCTCCAGTTGACCCGACTGAC
TCTCCCCCATTCGGTCAGCCCGGAGGAGGA---------GGAGGAGGCGGAGGGGATTTGCTTGACTTTTTGAAGCTTCT
CGCTCGTTTCTCTCCTAGCGTTGCGGCTGCCGGCCAACGGCCTC-GCGGATTTTTCTCCAGTCTCACCCCCTCCTTCAAG
TGGCGGCGGAGATCAGCTGGATCC-AAAAGCCTCGCCAGAAACCGGCTGGGACTCTAGGGTTGGCTGCTCAGCTCAGTTG
TCTTCGGCGGCTGCTCCTCCTGATCCCTCCCGTTGCCGCTGGCCAGCTCTCTCTGGCTTTGCTGACTTGACCCGGGACGG
GGGAAAGAGGAGCAGAGTTCGCCTGTGGATCTTCGGGAAAGGAAGCTCATTCA------TCCTGTCAGCTGGGAGGTAGA
GGAAGAGATGGGGAACTGCATGAAGTCCACGGCCCGGGTGGATCACAGCATGAACACTAGTGCCGCCTGTGAGTGCCTCT
CTTACTACTTGCCCCTAATTATGTTTTGAACTCACTCTGTAAAGAGATATAAGAGCGTTTAGATCACAACTTTAGTGATC
TATAAACGCTCTTATATTTCTTTACAGAGGGAGTAGTATGTATTTGTCAGTTTC---TACTTACCT--------GCATCT
TTTTTGTTCGATTGCTTTGGCTGTTTTGATTATTTGC---------------AGTTCTTTGATTTGCTTTGTGTTGAATT
GAGAGGCGT---ACCATATCTGGGGC-AAA-TATGGATACCATGTT---ATGCATCTTACACTTCTATTTCAGTCACTAG
TTTTTACCTACTTCGTTC--CTCTGGTGCACCTTCGCCTCTATTTTTGGAGGAAATTGACTATTTATTATTAAGTTCGTC
GGAGTTTGATTAAAACTACAAAGTTGATTTCTTCTTGACAAAAAATGTCTAGGGACTAGATTGTGAGAGATGATTAGTGC
TAATGAAAAAGAAGAAGATCCCGCGTACACACGTCGTATACATGTACAAGTATAAGGATAGTGATCGGCCCATAACTATC
TACATCGATCCACGCCTCCATCTATACCTAGCCGTCGCAACTCATCAGGCAGCGCGGCCGCCTCCTCAACCCTATGCGAT
GAATTCATCATCTGGTGCGCTAGCCGCTCACAATTCTTCGACGCTGTTTCTAATCTCTCCATGATCGGCCCATAACTATC
TACATCGGTCCACACCTCCATCTATACCTAGCCGTCGCAACTCATCAGGCAGCGCGGCCGCCTCCTCAACCCTATGCGAC
GAATTCATCATCTGGTGCGCTAGCCGCTCACAATTCTTCGACGCTGTTTCTAATCTCTCCATTGTCAATAATAAAAAAAC
ACAATGAAAATCGTTGCACCTAAGAAAGGATCGTAGCAAATCCTACAGAAAAATAGAATCGCGACATCTAGCACCTAAGG
ATCCTAACACATTTTTTTTCCTTTCCTGCTCCATGATTTTTTTTCTCTCTCGTGGAGTGATCCATCAGTATGTGTTCCGT
GTGTAGTAATCGATATGTATACGACCTGTGTACACGTGGGATCTTTTTCATTTTCCCTTAGCACTAATCATCTCTTACGC
TCCAGTCCCTGGTTAACGTTTTGTCAAGAAAAAATGAACTTTGTAGTTATAATCAAATTCCGACGAACTTAATAATAAAT
AGTCAATTTCCTCCTATTTTTGTCCCCCTTTCTTATTTCAGAA---------------CATGCCATGCTGCATGGATAAG
AACATTAATTTCTTCTTAGGTCTCGTATACTTCAAATTACCCGAGAGTAAATAAAACGGAACTTATTTAATTCGGAATTT
CAGATAGCAGAGAGCTCCTTCAGTTCATATCTTCAGTTTCATTGTAAACCTGAAGATGTTATTGTTGCCAATTTGTTCTT
ACACACATTTCCTTTGTTTCTTGTTGGGCCATCAGATCCATCGAAAGTGACCAGCAAAACAAGCATGTCATCTGCTACTT
CTGCGAGCAAGACCAACTCAACTCGTTCAACGTTTACTCTGCCATCTATAAGAGATCGCAGTGAGCCTCCCCGGACAGAA
GGTGAAATCTTGTCATCGTCGAACTTGAAGGCCTTCTTGTTCAATGATCTTAAAAATGCGACCAAGAATTTCCGCCCGGA
CAGTCTTCTTGGGGAAGGAGGGTTTGGGCATGTTTTCAAAGGTTGGATTGATGAACACACTCTTGCTCCTTCGAAACCGG
GAAGCGGTATGGTTGTTGCTGTCAAGAAGCTTAAACCAGAAGGTTTCCAAGGGCACAAGGAATGGCTGGTAGGTTCAAGA
CTCCTTACCAATAATTTTCTACTTTCCTCTGGCTATTTTTCATGTTTCCTGATGGTTGATTTTCCTGCTCAGACGGAGGT
TAACTACCTTGGCCAACTTCACCATGCCAATCTTGTTAAGCTCATTGGTTATTGCTCTGATGGTGATAACAGACTTCTGG
TGTATGAGTTCATGCCCAAGGGAAGTTTGGAGAATCATCTGTTCAGAAGTATGTTCTTTAATCCATATGGGTTTTATTGC
TAAATCATTTATTTCTGACGTCTTTAATATTCATGTGTCAACTATCAAGTAACCAATAATGTTTGTATTCTTTTAGGAGG
TGCTGATCCTTTGTCATGGGGAATAAGGCTTAAGGTTGCTATCGGGGCTGCTAAGGGTTTGTCATTTTTACATCATGCTG
AAAACCAAGTTATATATCGTGATTTCAAGGCATCAAACATTCTTCTTGACTCGGTACGGTTGAAATATAATGTTGACTCT
GATTACAAGCCAACCTTTGGGGTCTTTTAACTTAACTTGTTACTCTTGATTCAATGCAGGAATTCAACGCGAAGCTTTCA
GATTTTGGATTAGCGAAAGCTGGTCCAACTGGGGATAAAACTCATGTTTCCACACAAGTGATGGGCACCCATGGATATGC
TGCTCCAGAGTATATCGCAACAGGTTAGAAGATTATCTTTGTGTTTGTATTTACAAAAATGGGGCCATGTCTCCCTTCTT
TATGTGTCATGTGACATCAGTTCTGACAAATGGATGTTGATGTTGGGTCTTCCCTCTGTATTAGCTAAACCTAAGTTGAA
ATATTTTCTGGCCTAAATCATCCCATACCTA-----------TG-----------GTGAAGCCCTATTAGTTTAAAGTAG
CATAATCATATCATGGTGTTCTCCAATCATGTAGACCATCATGGAATTGTTTCCTGATTTCCCTTGATAGTCAACTACAC
TTGCCTTCTGTTT-GTCTACATTTCCTGATCCAGCAATTTCATTGTTATATATGTCAAGTCAAACAAATATTAAATGTAG
GAAATGGTCCACTCCACTT--TATTCCTATTAAATTCGACACCGGCCATATTATTCTTGGATTTTATAAAATGACAGTAC
ATATGAACATGTATTAATTATACTGTGCATAAGAAATGAACGAATATTTATTGT-----------TTATTTCTGGATAAA
CCCATTCTCATGTTACTTAATATTCACAGGTCGCCTCTCTGCTAAGGCAGACGTCTACAGCTTCGGGGTGGTGTTGCTTG
AGTTGCTGACCGGGAGACGAGCCCTGGACAAGTCAAAGCCAGGCATAGAGCAGAACCTAGTGGACTGGGCCAAACCGCAC
CTGCGTGACAAGCGCAGGCTGTACCGTGTCATGGACACGAAGCTGGGAGGCCAGTATCCTAAGAAAGGCGCACATGCCGT
CGCGAACCTCGCCTTGCAATGCATCTGCAACGACGCCAAGATGCGGCCGCAGATCTCAGAGGTCTTAGAAGAGCTGGAGC
AGCTCCAAGACTCTAAAAGCAATTTAATGTCGCCGCAGGTTGACATCCGGAGGACCTCCAATACCGTCCCAAAGTCGCCA
ATGAGGGGCCAACCCTCGCCGCGGCGCTCTCTTGGAGCGATGGCGCCGCCGTCACCGGCATTTAGGACCGCGCAAGTGCA
CTAGAAGCACACCTTAGAAGGGGGAGAGAGATGTATCCGTACGGCTGTACATTTGGTGGTGAGCTGTGTAATAGTTGTTT
CTAGTGATGCTTCTTGCTCATTTGTAGGGTTTGGCACGGAATATGACTACGGCACTCTG--ATGAATTGTTTTTCACCAA
ATCTGTGAGGTGTGCCTCACTGGGTTCTGTTCTGGTCCATTCTCATCGCGGTGCCGGGTTTATCTTCTGCAGACAT---G
ATACTGGATGATCCCTTGTTGACATGACAGAAACTGTGGACTGGGAGCATGTCCAGGCTT--CATTGGTTACCAAATTCG
TCGCCCAATTGTGCTCGATAAGAAACTGGCATGTTATCAGATAGGGTCTTGATGTTTTTT-----GTCACAGCTGCATAT
TCCTCAGGCAATTGCAATTCCTTTGTCCAGATAGGGATTAATATATGTAACATACAGGAAAGGACTCCCCTCTTGCAACA
TTATGCAACTGA-ACAAGATAAAATGGAAAAATGAGCCTTGAATTTCAGGAATGTATATGTACTAGATGTATGTCTCTTG
GGTTTAGTGATGATTTGATGAACTTGCACAAATTTGTTGTGGAGAACAAAAACAGCAGCGATAAGCATGCCAGCCTGCTA
AGGCGGGTAAATGATACAGTGTGTCTCATTTCTCGACAATAAACTCCTGAATCTCTATTCCAGTGTGACGGGCGCCGCCC
TGCTTCCTCACCAAAACTTCGTCGCCAACTTTCAGTGAAGTCACAGGAATAGCAGTCCTTCCACCAGATCCTACATCAGA
CAATCATACAGCTCAGGAATAATTTGGTCAAGATAGACCAATGATAAACCTTGAATCCTTATCTGAAGTTCTGAACCTTA
ACTAAATCTAGGGGAGTATCA-----------------------------GTACGATA----------------------
--------CCCCCACGATGGTTTTAAAGGTTTCCTTTTACAACAACACTTTGTACTCAGTTGATTTCCAGAGTTGTA
>SNPs
--------------S--------------------------------------S-----------------------S--
-------------------------S-----S--------------------SSSSSS----------------------
-----------S----------------------------S--------------------------------S------
-----------------------S---S------------------SS-----SSS--S---S---S-S-----------
---S-S--------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
-S-----SS-----------------------------------------------------------------------
------------------------------SSSSSSSSS-----------------------------------------
---S----------------------------------------------------------------------------
-----------------------SS-------------------------------------------------------
------------------------------S--------S-------------------S--------------------
----S--------S-------------------S------------------S---------------------------
--------------------------------------------------------------------------------
-----S----------S------SS-------------------------------------------------------
-----------------------------------S-S-------S------------------SS----S---------
--------------S-----S--------------------------------S-----------------------S--
-SSSS-SSSSSS---S--------------S--------S---------S---------------------S--------
----SS-----------S------------------------------SS------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----S-------------------------------------------
-------S-------S----------------------S-S--SS--S----S----SS--S-----------S--S---
----------------------S---------------------------------------------------------
--------------------S-------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
----S-----------------S------------------------------------------------------S--
-------SS----S-------------------------------------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S------------S-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------S------------------------------------------------------------S---------
--------------------------------------------------------------------------------
------------------------------S----------------------------------S--------------
-S--------------------S------SS---------------------S-------------------SS------
--------------------------------------------SSSSSSSSSSS-------------------------
-------------------------------S--------------------------S-----S----------S----
-------------------------------------------------------------------------------S
------S---------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------S---S-----------------S-------------------------------------
----------------------S-----------S-----S---------------------------------------
-----S-----------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
SS--------------------------------------------------------------------SSSSSSSSS-
-S----------SSS------------S---------------S------------------------------------
--------------------------------------------------------------SS----------------
--------------------------------------------------------------------------------
----------------------------------------------------------SS-------S------------
--------------------------------------------------------------------------------
-------------SS-----------------------------------------------------------------
-------------S------------------------------------------------------------------
----------S---------------------------------------------------------------------
---------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------
-----------------------------------------------------------------------------
>forward_326
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------TACGTCGAGGTCCT
GCATGT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_1369
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------GGTAACCTTGTCTGGGGCAA----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_1137
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------TCT
CTTACCACTTGCCCCCT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_3805
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------ACAGAGTCATGGTGAAGCCC----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_2885
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CTCCTTCGAAACCGG
GAAGT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_4326
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----AGACAAGCGCAGACTGTACC-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>forward_4281
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------CTCTGGACAAGTCGAAGCCC---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>reverse_5567
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------GGTTGTACGATACCCCCACG--------------
-----------------------------------------------------------------------------
