>input_sequence_30776
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-----------------------------------------------------------------------------ATG
GCGGACAAGGAGCCCGTCGTGGAGCGCCCCGTCGCGGAGGAGGAAGGCGAGGACTCCGCCGCCGCGGCCGCTGCCGGCGA
GGAGGAGGACACCGGTGCCCAGGTCGCCCCCATCGTGCGGCTCGAGGAGGTCGCCGTCACCACCGGCGAGGAGGACGAGG
ACTCTCTCCTCGACATGTAAGCTCCCCCTCGTCCCCCCTAGTTCTGCTCGTTTCGGCTCGATCTGGCGCTGATTTTTGGA
CGGGTTCGTGCGGCGATGTGCAGGAAGGCGAAGCTATACAGGTTCGACAAGGATGGGAACCAGTGGAAGGAGAGGGGCAC
GGGCACCGTCAAGCTGCTCAAGCACAAGGAGAACGGCAAGGTCCGCCTTGTTATGCGCCAGGCCAAGACACTTAAGATCT
GCGCCAATCACCTAGGTCTGTAGTTGTTTCCTCAGATTTTGCT-CCTTTAGTTCCGATCGCTCAGTTGCTTCAAGTAGAT
TCATCACAGGATCTCGTCTCACGGTTATGGCCTTGATCCTCTCTGTGTGCAGTGATCTCGACCACGAAGATGCAGGAACA
CGCCGGCAGCGACAAGTCCTGTGTCTGGCACGCGGCAGACTTTGCTGACGGAGAACTTAAGGATGAGATGTTTGCCATCC
GGTTTGGCACCGTTGAGAGTGAGTTCTAAACTCTATTTCCGCGTGCGTGTGTCTTGCGTGGTTGACTTGGTTGGATAACA
TGCTAGATCACCTTGTTTGTAGCATTAGTAGTTTCTTTTGTATGCTTTGTGAGACACTAGTGAATCCTGACCTGGTTACA
TTCTATAGCTGAACGTTGTGTTTTGTCTTGAGCACGTGAATTTTTCTTTTAGCAATTTAGTATTTACGAGGCTCGGTGAA
TCATCAGCAAAACAACATATTTAGGGTGTGTGTTGGCACTCTTTATCAGAAATTACATCTTAAGCATGTGATCTTGTAGT
AATCTACTATTTGGGATAAAGGATCATAAAAAATACCTTTCATGATTGGGGGTAGGTGGATTTGGTATAATAAGGGCAAT
GTTCCAAGAGGCAAGGCCATTCCTTGTCATAGTGAAGGTGACACGACCACAACCTATCATTGTTTTCATGCGACTCTTGA
TGTTTGTGAATTTTTAACATTCAAGGTTCTTCTAAATTTAAGTTGTAACGTCCTAGCTATATCATAATATCATGTCTCA-
----ACG-----GTTTTCCTGTAGATCCACATGGAAGTTCTTTTTGCTGCTTTGTTTATGTTAGTGGTCACAGGGATCCT
CTCTAATTGACATTTTTAATTCCAGTTGCCGAGTATTTATACATTAATT-AAGTATTTCCAGTGGTAGGGTATGGATGAT
ATTTGTAGCTTCAAAATTGCACCTTTTTTGCCGCCTTGTGGGTCGCTGCAATCAATATCTGGTTGTAACCTGTTACAACT
TTTTAGGGATGATAAGTTGCAAACTT-GTAGTTTCATAGGTTCCTGACATAATTTGGAATAATGCACTGTCCCAGTTCTT
TTGTTTCGTGTTGTTTTCCCCACTAGTAGCCATGCCTGATTTGTGATAAA--TGGTGCATGCTAGCTCCGC--------C
ACACATGTTAGTCTTTGTTTTTAGTCATGCTCAATGCAGCATTTTGATTGTGATTCTGTGAAGTACTATAATTAGGCATA
TACTGTCTTGTTTAACCTACTGACTTGCTCAGTATTTCTTGTGTAGTATTTATTATTTCATCCAAGTAGCAGCTGCACAT
TTAGATATATAAATATT---TTGCTACTTATGGCTGTCGCTCAATCTTATCTTTAGCTATAACA--TCTCTCCTGCAAAT
CTCGCTGATACCCTGTTCAAGTAGTCATGTTTAAGCTGCATAGGGAGCCTTTGGATCATTGGCTCACCTAGTTTACCTAG
GCTAGGCTCCACTGGCCTGTTTGAGCTATACCCTACCCAGGCAGAGGTACTTGTTTGATATGTGGTTAGCTAATCCAACC
TGAGCATATTCAAGCAGCAGTATCTACACCCACTAGCAGGACAACAGTTTAACTCTGCATTTTTCTCTGTTATTGCCGTC
AGAAGAGAGCTGTATAGGCTCTCCCAGTGGAGT-AAAGATTTTCTAGCCCAGAATTGCTTGGCAAAATTAACTTTCCTCT
ACCAAACACCCAGGGTTAGCATTAACGTTTAGAAACTAAACACACCTGCAGTGTTTTCCATGTGTTGCCCCAGTCAACCA
GAGGTCAACTGAAAGTTGTGCAATTTCTTTTGCTCTATGCCACCATAGTGATAGTGTGCTGATGCTCCATATTTATGTTT
TACTAAGTGCAGACTTTGAAA-TAGTTGAATGTCTCTGCTAATGACTCCCTTCTTATCTATTTTTTAGATTGCAAGAAGT
TTAAAGACTTAGTTGATGAGATCGCTGAGTCGCTTGCAAAGAATGAAGGCGGTGAAAGCGAAGAAGGTTCTTCCGCAGCT
GGACTGCTGGAGAAACTTAGTGTAAGCGAAAGCAAACCTGAGGAAAGCGCAGCTAAGGAGGAATCAACTGATGCTAGCAA
GGAGACAGAAACCAAAGCCGCGACAGCCCCCTCAGAGTAG----------------------------------------
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>chr1D_1_TraesCS1D01G225400
AGAGAGGTTATAAGAAAATCTAATAAAGG--AAAAAAACATTAGTGACGTCGGTAATATTTTGTTACAAAACTTATTCTA
TCTCAAGCATTAGATCGATATG--TCTGGTTGCAAAGGTTGTGTGAACATAGTTTTTTTCCACACTAGTCTGGATTTTTT
TCCCAAGGATGGCACTAGTCTAGACTTAATTATGCA---CCTTAAAAACATTTTGAATGACTAAAAGTTGTTCACCTCTT
TCTCGAGTCGTAGTTT-----AGATAGATAAGTTGCTTATAATGGAATTTGTATTCAAGTTTTATATCTTACATGGGTGT
TTGTAATTTTTTGGATTTGTTTCAGATTTTTATGTTTAGCGGGAGACAATGTACATGTGGACTACAAGATATGTGTGGTG
ATTTTGCAACTATTGTAAACAACGAACTGAACGTAACTACGATGGTTCAAATCTTAGGCTTAGCATTGGTGGTCACATTT
TTCTGGATTTATTCCAGTTCTTTCGGTGATGTGCGTTCAGTGCGACCA----------TCGACTTCAAAGTCATTTGTGG
CAAGTTTGTCAATCTTAATATGAACTCAGTCTCTAGTAGCCTTCATAAGGTG--------AACTAGTAACAAATTATTTA
TTC-AAAATTTTAAAAGTCACAAAAGAAAAGTTTTTTTTTTGTATGTCCCGGAAGGGGCAAAGAAAAGCTATTTTTAGTT
GCAAAAGAAAAGA-AAAGATTGTTGGAAGAAAAACTGACGCCGTTGCTAATCGGCAGTGGCGTTGTTAACACGCAGTTCC
GACGGTGACCCT--ACGCCAGGGCCTCGCCCCATCACGCTTCCAGTGGGCCCCACTTCTGTGGCGGCGCCTCCCCCTCCG
TGGTACACAAAAACCCTAGCGCACTGCCCTTTTACGGCCGCCCCC-CTCCTCTCGACCGACCTCCCAAAACTTCCCTCGG
CGTCTCTCTTCGTCC--CCCCCTCTCGCCGCCGCGTCGACTCGGAAGTAGCAAGCGCGCCGCCGCCCAACCCTTCCGATG
GCGGACAAGGAGCCCGTCGTGGAGCGCCCCGTCGCGGAGGAGGAAGGCGAGGACTCCGCCGCCGCGGCCGCTGCCGGCGA
GGAGGAGGACACCGGTGCCCAGGTCGCCCCCATCGTGCGGCTCGAGGAGGTCGCCGTCACCACCGGCGAGGAGGACGAGG
ACTCTCTCCTCGACATGTAAGCTCCCCCTCGTCCCCCCTAGTTCTGCTCGTTTCGGCTCGATCTGGCGCTGATTTTTGGA
CGGGTTCGTGCGGCGATGTGCAGGAAGGCGAAGCTATACAGGTTCGACAAGGATGGGAACCAGTGGAAGGAGAGGGGCAC
GGGCACCGTCAAGCTGCTCAAGCACAAGGAGAACGGCAAGGTCCGCCTTGTTATGCGCCAGGCCAAGACACTTAAGATCT
GCGCCAATCACCTAGGTCTGTAGTTGTTTCCTCAGATTTTGCT-CCTTTAGTTCCGATCGCTCAGTTGCTTCAAGTAGAT
TCATCACAGGATCTCGTCTCACGGTTATGGCCTTGATCCTCTCTGTGTGCAGTGATCTCGACCACGAAGATGCAGGAACA
CGCCGGCAGCGACAAGTCCTGTGTCTGGCACGCGGCAGACTTTGCTGACGGAGAACTTAAGGATGAGATGTTTGCCATCC
GGTTTGGCACCGTTGAGAGTGAGTTCTAAACTCTATTTCCGCGTGCGTGTGTCTTGCGTGGTTGACTTGGTTGGATAACA
TGCTAGATCACCTTGTTTGTAGCATTAGTAGTTTCTTTTGTATGCTTTGTGAGACACTAGTGAATCCTGACCTGGTTACA
TTCTATAGCTGAACGTTGTGTTTTGTCTTGAGCACGTGAATTTTTCTTTTAGCAATTTAGTATTTACGAGGCTCGGTGAA
TCATCAGCAAAACAACATATTTAGGGTGTGTGTTGGCACTCTTTATCAGAAATTACATCTTAAGCATGTGATCTTGTAGT
AATCTACTATTTGGGATAAAGGATCATAAAAAATACCTTTCATGATTGGGGGTAGGTGGATTTGGTATAATAAGGGCAAT
GTTCCAAGAGGCAAGGCCATTCCTTGTCATAGTGAAGGTGACACGACCACAACCTATCATTGTTTTCATGCGACTCTTGA
TGTTTGTGAATTTTTAACATTCAAGGTTCTTCTAAATTTAAGTTGTAACGTCCTAGCTATATCATAATATCATGTCTCA-
----ACG-----GTTTTCCTGTAGATCCACATGGAAGTTCTTTTTGCTGCTTTGTTTATGTTAGTGGTCACAGGGATCCT
CTCTAATTGACATTTTTAATTCCAGTTGCCGAGTATTTATACATTAATT-AAGTATTTCCAGTGGTAGGGTATGGATGAT
ATTTGTAGCTTCAAAATTGCACCTTTTTTGCCGCCTTGTGGGTCGCTGCAATCAATATCTGGTTGTAACCTGTTACAACT
TTTTAGGGATGATAAGTTGCAAACTT-GTAGTTTCATAGGTTCCTGACATAATTTGGAATAATGCACTGTCCCAGTTCTT
TTGTTTCGTGTTGTTTTCCCCACTAGTAGCCATGCCTGATTTGTGATAAA--TGGTGCATGCTAGCTCCGC--------C
ACACATGTTAGTCTTTGTTTTTAGTCATGCTCAATGCAGCATTTTGATTGTGATTCTGTGAAGTACTATAATTAGGCATA
TACTGTCTTGTTTAACCTACTGACTTGCTCAGTATTTCTTGTGTAGTATTTATTATTTCATCCAAGTAGCAGCTGCACAT
TTAGATATATAAATATT---TTGCTACTTATGGCTGTCGCTCAATCTTATCTTTAGCTATAACA--TCTCTCCTGCAAAT
CTCGCTGATACCCTGTTCAAGTAGTCATGTTTAAGCTGCATAGGGAGCCTTTGGATCATTGGCTCACCTAGTTTACCTAG
GCTAGGCTCCACTGGCCTGTTTGAGCTATACCCTACCCAGGCAGAGGTACTTGTTTGATATGTGGTTAGCTAATCCAACC
TGAGCATATTCAAGCAGCAGTATCTACACCCACTAGCAGGACAACAGTTTAACTCTGCATTTTTCTCTGTTATTGCCGTC
AGAAGAGAGCTGTATAGGCTCTCCCAGTGGAGT-AAAGATTTTCTAGCCCAGAATTGCTTGGCAAAATTAACTTTCCTCT
ACCAAACACCCAGGGTTAGCATTAACGTTTAGAAACTAAACACACCTGCAGTGTTTTCCATGTGTTGCCCCAGTCAACCA
GAGGTCAACTGAAAGTTGTGCAATTTCTTTTGCTCTATGCCACCATAGTGATAGTGTGCTGATGCTCCATATTTATGTTT
TACTAAGTGCAGACTTTGAAA-TAGTTGAATGTCTCTGCTAATGACTCCCTTCTTATCTATTTTTTAGATTGCAAGAAGT
TTAAAGACTTAGTTGATGAGATCGCTGAGTCGCTTGCAAAGAATGAAGGCGGTGAAAGCGAAGAAGGTTCTTCCGCAGCT
GGACTGCTGGAGAAACTTAGTGTAAGCGAAAGCAAACCTGAGGAAAGCGCAGCTAAGGAGGAATCAACTGATGCTAGCAA
GGAGACAGAAACCAAAGCCGCGACAGCCCCCTCAGAGTAGTGGGCAGAGCAACGCCCGTCACAATGGTACCGCTGAGCAT
TGCTCGGTGGCAAGAGTCAGTTTGTCGGTCCTTCCTGTTGACGGAAGTTGGTAGTCGTTGACGATGAAATATGCTGAGAA
CTTTTTGAGACAGTCAGAAGGTGTCTTGAGCAGAGTCCATCTTCACCC-CCACTGGGTGTTCACGCGTCTGAGTATTTAT
TGTTATGTAAAATATCTGCTCGCATGGCTTTTGGATGGTGTTGTCTTGCTTTTGTCAAGAACTCGAAATGTAGTCCATGA
GTATTGAGTTTGGAACATTTTGGGTTTGAATTGTGGGTATTTGAGTTGCATGTGCTGGTTATGGATTGCATACAACTTCT
-ATAAATCACTTGCTATATTATTTTTACGCATTTGATATGCCAGTTCCTTATTGTTTTGTT---CTTACATGTGAGAAGC
CGCTCCTGATCGTCGGTGGGCAGCTAGCATGCGCCTGTTACAAAGTTTGAAGTCAGTAGATTTGGATACATTAGAGCTGA
GACTGTACAAAAGAAAACTTAGTTGCATAATCTTGACGGAGCATGTTTGGTGCCAGTTTATATTGTTTTTACTTTT-TTT
TAGGGAGTTCATATTGTTTTACTACTATGGCAAGTATCAGATCATCTTTCTTTTTTTCTTTTTTTTTTGCGAGAAACATA
GAGCTTTATTCAATCAAAACCGGCTCCAGCGCAATCAACCATCAGGCTCGTCACTAGGAAGCCGGGAGGAGAGTCCATCC
AACAATCAGTCACTCCCAGTGTGCTCGCATGCTTTGCACAAAGGTGCGCTGAGTTGTTAGCTTGTCTCAATACATGATGA
ACATCAAAACTAAGGAAAGTTGAGGCTAGCCCTTCAATTTCGAGAAGAATAGGCGCTATGACAGAGTGCGAAAATTGTCG
CGAGTTCCAGAGCTGTACCAGCTCCAGACAATCTACTTTGAGCACCACTCGCGAAGAACCTCGAAGCTTGCCAAAGATGA
CTCCGT
>chr1B_2
-GAGAGGTTATAATAAAATGTGATAAAGGAAAAAAAAACAATAGCGACGTCGGTAATATTTTGTCGCAAAACTTGTTCTA
TCTTAACCATTAGATCAATATATATCTGGTTGCAAAGATTGTGTGAACATAGTTTTTCTTACACATCAGTCTG-TTTTTT
TT--AAGGATCGCACTAGTCTAGGCTTAATTATGTA---CCTT-AAAACATTTTGAATGACTAAAAGTTGTTCACCTCTT
CCTCGAGTCGTAGTTT-----AGACAGATAAGTTGCTTATAATGGAATTTGTATTCAAGTTTTATATCTTACACGGGCGT
TTGTAATTTTTTGGATTTGTTTCAGATTTTTATGTTCAGTGGGAGACAATGTACATGTTGACCACAAGATATGTGTGGTG
ATTTTGCATCTAATGTAAACAACGAACTGAGCGTAATTGCAAT-GTTCAAGTCTTAGGCTTAGCATTG-TGGTCACATTT
CTCTGAATTTATTTCAGTTCTTTCGGTGATGTACGTTCAGTGCGAGGAGACATCCCTGTCGACTTCAAAGTCGTTTGTGG
CAACTTTGTCAATCTTAAGATGAACTCAGTCTCTAGGAGCCTTCATAGGGTGAGTGTATGAACTAGTAACAAATAATTTG
TTCAAAAATTTAAAAAGTCACAAAAGAAAAGTTTTATTTATGGGATTTCCGGAAGGGACAAAGAAAAACTATTTTAAGTT
GAAAAA--AAAGA-AAAGATTGTTGGAAGAAAAACTGACGCCGTTGCTAATCGGCAGTGGCGTTGTTAACACGCAGCTCA
GGCGATGACCCTACACGCCAGGGCCTCGCCC-ATCACGCTTCCAGTGGGCCCCACTTCTGTGGCGGCGCCTCCCCCTCCG
TGGTACACAAAAACCCTAGCGCACTGCCCTTTTACGGCCG-CCCC-CTCCTCTCGACCGACCTCCCAAAACTTCCCTAGG
CGTCTCTCTTCGTCCCTCCCCCTCCCGCCGCCGCGTCGACTCGGAAGTAGCAAGCGCGCCGCGGCCCAACCCTTCCGATG
GCGGACAAGGAGCCCGTCGTGGAGCGCCCCGTCGCGGAGGAGGAAGGCGAGGACTCCGCTGCCGCGGCCGCCGCCGGCGA
GGAGGAGGACACCGGTGCCCAGGTCGCCCCCATCGTGCGGCTCGAGGAGGTCGCCGTCACCACCGGCGAGGAGGACGAGG
ACTCTCTCCTCGACATGTAAGCTCCCCCGCG-TCCCCCTAGGTCTGCTCGTTTCCGCTCGATCTGGCGCTGATTTTGGGA
TTGGTTCGTGCGGCGATGCGCAGGAAGGCGAAGCTATACAGGTTCGACAAGGATGGGAACCAGTGGAAGGAGAGGGGCAC
GGGCACCGTCAAGCTGCTCAAGCATAAGGAGAACGGCAAGGTCCGCCTTGTTATGCGCCAGGCCAAGACACTTAAGATCT
GCGCCAACCACCTAGGTTTGTGGTTGTTTCCTCAGATTTTTGCCCCTTTATTTCCGATCGCTCAGCTGCTTCAAGTAGAC
TCATGACAGGATCTCGTCTCACGGTTATGGCCCTGATCCTCTCTGTGTGCAGTGATCTCGACCACGAAGATGCAGGAACA
CGCCGGCAGCGACAAGTCCTGTGTCTGGCACGCGGCAGACTTTGCTGACGGAGAGCTTAAGGATGAGATGTTTGCCATCC
GGTTTGGCACCGTGGAGAGTGAGTTCTCAACTCTATTTCCGCGTGG--GTGTCTTGCGTGGTTGACTTGGTTGGATAACA
TGCTAGATCACCCTGTTTGTAGCATTAGTAGTTTCTTCTGTATGCTTTGTGAGACACTAGTGAAACATGACCTGGTTACA
TTCTATAGCTGAACGTTGTGTTTTGTCTTGAGCACGTGGATTTTTCTTTTAGCAATTTAGTATTTACGAGGCTCAGTGAA
TCATCAGCAATACGACATATTTAGGGTGTGTGTTGGCACTCTTTATCAGAAATTACATCTTAAGCATGTGATCTTGTAGT
AATCTACTATTTGGGATAAAGGATCATAAAAAATACCTTTCATAATTGGGGGTAGGTGGATTGGGTATAATAAGAGTAAC
GTTCCAAGAGGCAAGGCCGTTACTTGTCATAGTGAAGGTGACACGATCACAACCTATCATTGTTTTCATGTGACTCTTGA
TGTTTGTGAATCTGTAACATTCAAGGTACTTCTAAATTTAAGTTGTAACGTCTTAGCTATATCATAATATCATGTCTCGA
CTTTACG-----GTTTTGCTGTAGATCCACATGGAAGTTATTTTTGCTGCTTTGTTTATGTTAGTGGTCACAGGGATCCT
CTCTAATTGACATTTTTAATTCCAGTTGCCGAGTATTTGTACATTAATTAAGGTATTTCCAGTGGCAAAGTATGATTGAT
ATTTGTAGCTTCAAAATTGCACCTTTTTTTGCGGCCTTGTGGTTGCTACAATCAAGATCTGGTTGTAACCTGTTACAACT
TTTTAGGGATTTTAAGTTGCAAACTTGGTAGTTTCATAGGTTCCTGACATGATTTGGAATAATGCACTGTCCCAGTTCTT
TTGTTTCGTGTCGTTTTCCCCACTAGTAGCCATGCCTGATTTGTGATAAAAATGGTGTATGCTAGCTCTGCGCCTCTGCC
ACACGCATTAGTCTTTGTTTTTAGTCATGCTCAATGCAGCATTTTGAGTGTGATTCTGTGAAGTACTATAATTAGGCATA
TAATGTCTTGTTTAACCTATTGACTTGCTCAGTATTTATTGTGTAGTATTTCTTATTTCATCCAAGTAGCAGCTGCGTA-
TTAGATATATAAATGTTCTGTTGCTACTTATGGCTGTCGTTCAATCTTATCTTTAGCTATAACA--TCTC--CTGCAAAT
CTCCCTGATACCCTGTTCAAGTAGTCATGTTTAAGCTGCATAGGGAGCCTTTGGATCATTAGCTCACCTAGT-----TAG
GCTAGGCTCCACTGGCCTGTTTGAGCTATACCCTACCCAGGCAGAGCTACTTGTTTGATATGTGGTTAGCTAATCCAACC
TGAGCATATTCAAGCAGCAGTATCTACGCCCACTAGCAGGACAACAGTTTAACTCTGCATTTTTCTCTGTTATTGCCGTC
AGAAGAGAGCTGCATAGGCTCTCCCAGTGGAGTAAAAGATTTTCTAGCCCAGAATTGCTTGGCAAAATTAACTTTCCTCT
ACCAAACACCCAGGGTTAGCATTAACGTTTAGGAACTAAACACACCTGCAGTGTTTTCCATGTGTTGCCCCAGTCAACCA
GAGGTCAACTGAAAGTTGTGCAATTTCATTTTCTCTATGCCACCATAGTGGTAGTGCGCTGATGCTCCATATTTATGTTC
TACTAAGTGCAGACTTTGAAACTAGTTGAATGTCTCTGCTAATGACTCCCTT---ATCTATTTTTTAGATTGCAAGAAGT
TTAAGGACTTGGTTGACGAGATCGCTGAGTCGCTTGCAAAGAATGAAGGCGGTGAAAGCGAAGAAGGTTCTTCCGCAGCT
GGACTGCTGGAGAAACTTAGTGTAAGCGAAAGCAAACCTGAGGAAAGTGCAGCTAAGGAGGAATCAACTGATGCTAGCAA
GGAGACAGAAACCAAAGTCGCGACAGCCCCCTCAGAGTAGTGGGCAGAGCAACGCCCGTCACAATGTTACTGCTGAGCAT
TGCTCGGTGGCAAGAGTCAGTTTGTTGGTCCTTCCTGTCGACGGAAGTTGGTAGTTGTTGACGATGAAATATGCTGAGAA
CTTTTTGAGACAGTCAGAAGGTGTCTTGAGCAGAGTCCATCTTCACCC-CG-CTGGGTGTTCACGCGTCTGAGTATTTAT
TGTTATGTAAAATATCTGCTCGCATGGCTTTTGGATGGTGTTGTCTTGCTTTTGTCAAGAACTCGAAATGTAGTCCATGA
GTATTGAGTTTCGAACATTTTGGGTTTGAATTGTGGGTATTTGAGTTGCATGTGCCGGTTATGGATTTTATACAAC---T
-ATAAATCATTTGCTATATCATTTTTACACATTTGATATGCCAGTTCCTTATTCGTTTGTTTTTCTTACATGTGAGAAGC
CGCTCCTTATCGTTGGTGTGCAGCTATCATGCGCCTGTTACAAAGTATGAAGTCAGTAGATTTGCATACGTTAGAGCTGA
GACTGTACAAAAGAAAACTTAGTTGCGTAATCTTGACGGAGCATATTTGGTGCCAGTTTATATTATTTTTACTTTTATTT
GAGGGAGTTTATATTGT--------TATGGCAAGTATCAGATCATCT---------------------------------
--------------------------------------------------------------------------------
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------
>chr1A_2
GAGAGGTTTATAAGAAAATGTGACAAAGGAAAAAAACAC--TAGCGACATCGGTAATATTTTGTTGCAAAACTTGTTCTA
TCTCAAGCATTAGATCGTTATG--TCTGGTTGCAAAGAT--TGTGAACATAATTTTTTTCAACACTAGTCTGGATTTTTC
CT--AAGGATGGCACTAGTCTAGACTTAATTATGTACTACCTT-AAAACATTTTGGATGACTAAAAGTTGTTCACCTCTT
TCTCGAGTCGTAGTTTAGATTAGATAGATAAGTTGCTTATAATGGAATCTGTATTCAAGTTTTATATCTTACACGGGTGT
TTGCAATTTTTTGGATTTGTTGCAGATCTGTATGTTCAGCGGGAGACAATGTACATGTCGACTACAAGTTATGTGTGATG
ATTTTGCAACTATTGTAAAGAACGAATTGAGCGTAACTGTGATGGTTTAAGTTTTAGACTTAGCATTGGTGGTCACATTT
CCCAGAATTTATTTCAATTATTCCGGTGATGTGCATTTGGTACGATGAGACATTTCCGTCAACTTCAAAGGCGTTTATGG
CAACTTTGTTAATCTTAAGAGGAACTCAGTCTCTAAGAGCCTTCATAGGGTGAGGGTATGAACTAGTAACAAATAATTTG
TTC-AAAATTTAAAAAGTCACGAAAGAAAAG------------------------GGACAAAGAAAAGCTATTTTTAATG
AAAAAA--AAAGAGAAAAATTGTTGGAAGAAAAACTGACGCCGTTGCTAATCGGTAGTGGCGTTGCTAACACGCAGTTCA
GACGGTGACCCT--ACGCCAGGGCCTCGCCC-ATTACGCTTCCAGCGGGCCCCACTTATGTGGCGGCGCCTCTCCCTCCG
TGGTACACAAAAACCCTAGCGCACTGCCCTTTTACGGCCG-CCCCCCTCCTCTCGACCGACCTCCCAATACTTCCCTAGG
CGTCTCCCTTCGTCC--CCCCCTCTCGCCGCCGCGTCGACTCGGAAGTAACAAGCGCGCCGCCGCCCAACCCTTCCGATG
GCGGACAAGGAGCCCGTCGTGGAGCGCCCCGTCGCGGAGGAGGAAGGCGAGGACTCCGCCGCCGCGGCCGCCGCCGGCGA
GGAGGAGGACACCGGTGCCCAGGTCGCCCCCATCGTGCGGCTCGAGGAGGTCGCCGTCACCACCGGCGAGGAGGACGAGG
ACTCTCTCCTCGACATGTAAGCCCCCCCGCGTTCCCCCTAGGTTTGCTCGTT-CGGCTCGATCTGGCGCTGATTTTGGGA
CGGGTTCGTGCGGCGGTGCGCAGGAAGGCGAAGCTATACAGGTTCGACAAGGACGGGAACCAGTGGAAGGAGAGGGGCAC
GGGCACCGTCAAGCTGCTCAAGCATAAGGAGAACGGCAAGGTCCGCCTTGTTATGCGCCAGGCCAAGACGCTTAAGATCT
GCGCCAACCACCTAGGTTTGCAGTTGTTTCCTCAGATTTTGCT-CCTTTATTTCCGATCTCTCAGCTGCTTCAAGTAGAT
TCATCACAGGATCTCATCTGACGGTTATGGCCTTGATCCTCTGTGTGTGCAGTGATCTCGACCACGAAGATGCAGGAACA
CGCCGGCAGCGACAAGTCCTGTGTCTGGCACGCGGCAGACTTTGCTGACGGAGAGCTTAAGGATGAGATGTTTGCCATCC
GGTTTGGCACCGTGGAGAGTGAGTTCTCAACTCTGTTTCCGCATGGGTGTGTCTTGCGTGGGTGGCTTGGTTGGATAACA
TGCTAGATCACCCTGTTTGTAGCATTAGTAGTTTCTTCTGTATGCTTTGTGAGACACTAGTGAAACATGACCTGGTTACA
TTCTATAGCTGAACCTTGTGTTTTGTCTTGACCACGTGAATTTTTCTTTTACCAATTTATTATTTGCAAGGCTCAGTGGA
TCATCAGCAAAACAACATATTTAGGGTGTGTGTTGGCACTCTTTATCAGAAATTACATCTTAAGCATGTGATCTTGTAGT
AATCTACTATTTGGGATAAAGGATCATAAAAAATACCTTTCATGATTGGGGGTAGGTGGATTGGGTATAATAAGGGTAAC
GTTCCAAGAGGCAAGGCCATTCCTTGTCAGAGTGAAGGTGACACGACCACAACCTATCATTGTTTTCATGTGACTCTTGA
TGTTTTTGAATTTGTAACATTCAAGGTTCTTCTAAATTTAAGTTGTAACGTCCTAGCTATATCATAATATCATGTCTCA-
----ATTTTATCGTTTTGCTGTAG-TCCACATGGAAGTTCTTTTTGCCACTTTGTTTATGTTAGTGGTCACAGGGATCCT
CTCTAATTGACATTTTTAATTCCAGTTGACGAGTACTTGTACATTAATTAAAGTATTTCCACCTGTAAAGTATGATTGAT
ATTTGTAGCTTCAAAATTGCATCTTTTTTGCGGCCTTGTGGGTCGCTGCAATCAAGATCTGGTTGTAACCTGTTAGAACT
TTTTAGGGATGAGAAGTTGCAAACTTG-TAGTTTCATAGGTTCCTGACATAATTTGGAATAATGCACTGTCCTAGTTCTT
TTGTTTCGTGTTGTTTCCCCCACTAGTAGCCAT-----------GATAAA--TGGTGTATGCTAGCTCTGC--------C
ACACACGTTAGTCTTTGTTTTAAGTCATGCTCAATGCAGCATTTTGTGTGTAATTCTGTGAAATACTATAATTAGGCATA
TAATGTCTTGTTTAACCTATTGACTTGCTCAGTATTTATTGTGTAGTATTTCTTATTTCATCCAAGTAGCAGTTGCGTGT
TTAGATATATAAATGTTCTGTTGCTACTTATGGCTGTCGTTCAATCTTATTTTTAGCTATAACGTCTCTC--CTGCAAAT
CTCCCTGATACCCTGTTCAAGTAGTCATGTTTAAGCTGCATAGGGAGCCTTTGGATCATTAGCTCACCTAGT-----TAG
GCTAGGCTCCACTGGCCTGTTTGAGCTATACCCCACCCAGGCGGAGCTACTTGTTTGATATGTGGTTAGCTAATCCAATC
TGAGCATATTCAAGCAGCAGTATCTTCACCCACTAGCAGGACAACAGTTTAACTCTGCATTTTTCTCTGTTATTGCTGTC
AGAAGAGAGCTGCGTAGGCTCTCCCAGTGGAGT-AAAGATTTTCTAGCCCAGAATTGCTTGGTAAAATTAACTTTCCTCT
ACCAAACACCCAGGGTTAGCATTAACATTTAGGAACTAAACACACCTGCAGTGTTTTCCATGTGTTGCCCCAGTCAACCA
GAGGTCAACTTT-AGTTGTGCAATTTCTTTTGCTCTATGCCACCGTAGTGATAGTGTGCTGATGCTCCATATTTATGTTT
TACCAAGTGCAGACTTTGAAACTAGTTGAATGTCTCTGCTAATGACTCCCTTG---TCTATTTTTTAGATTGCAAGAAGT
TTAAGGACTTGGTTGACGAGATCGCTGAGTCGCTTGCAAAGAATGAGGGCGGTGAAAGCGAAGAAGGTTCTTCTGCGGCC
GGACTGCTGGAGAAACTTAGTGTAAGCGAAAGCAAACCTGAGGAAAGTGCAGCTAAGGAGGAATCGACTGATGCTAGCAA
GGAGACAGAAACCAAAGCCGCAACAGCCCCCTCAGAGTAGTGGGCAGAGCAACGCCCGTCACAATGGTACTGCTGAGCAT
TGCTCGGTGGCATGAGTCAGTTTGTCGGTCCTTCCTGTCGACGGAAGTTGGTAGTCGTTGACGATGAAATATGCTGAGAA
CTTTTTGTGACAGTCAGAAGGTGTCTTGAGCAGAGTCCATCTTCACCCCCG-CTGGGTGTTCACGCGTCTGAGTATTTAT
TGTTATGTAAAATATCTGCTCGCATGTCTTTTGGATGGTGTTGTCTTGCTTTTGTCAAGAACTTGAAATGTAGTCCATGA
GTATTGAGTTTGGAACATTTTGGGTTTGAATTGTGGGTATTTGAGTTGCATGTGCTGGTTATGGATTGCATACAGC---T
TATAAATTACTTGCTATATTATTTTTGCACATTTGATATGCCAGTTCCTTGTTGGTTTGTTCTTCTTACATGTGAGAAGC
AGTTCCTTGGTTTGTTCTTAT--------------------AAAGTTTGAAGTCAGTAGATTTGGATACATTAGAGCTGA
AACTGTACAAAAGAAAACTTAGTTGCGTAATCTTCACGGAGCATATTTGGTGCCAGTTTATATTGTTTTTACTTTT-TTT
GAGGGAGTTTATATTGTTTTACTACTATGGCAAGTATCAGACCATCT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------
>SNPs
S------------------S-S------------------S---S--------------------S--------S-----
-------------------------------------S----------------------S-------------------
-SSS------------------------------S--------S------------------------------------
-------------------------------------------------------------------------S------
------------------------------------S---------------------S---------------------
------------------------------S-------S-----------S-----------------------------
S----S-------S-------------------------------SS-------------------------S-------
---S--------------S-----------------S----------S--------------------------S----S
-----------S-----------------------S---S--SSSS-S---------S----------------------
-S----SS-----------------------------------------------------------------------S
-------------------------------S------------------------------------------------
----------------------------------------S------------------------------------S--
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
----------------------------S---S--------S----------------------------------S---
------------------S-------------------------------------------------------------
------------------------S-------------------------------------------------------
-------S---------S--------------------------------S--------------S--------------
--------------------------------------------------------------------------------
------------------------------------------------------S-------------------------
-------------S-------------S-----------------S----------------------------------
------------S------------------------S--------------------------S-S-------------
--------------------------------------------------------------------------S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------S-------------S--S
----------------------------------------------------------------------S---------
-------------S------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------S----------------------------SS-----SS----
-------------------------------------------------------S------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------S-----------
-----S-----------------------------------------S--------------------------------
--S----------------S-----------------S-------------S------------------------SS--
--------------S------------------------S------------------------------SS--------
---S--------------------------------------------------------S-----------SSSSS---
----------------------------------------------S---------------------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------SSS-------------------------
----S-----S-----S---------------------------------------------------------------
-----------------------------------------------S--------------------------------
----------------------------------------------------------------------S---------
--------------------------------------S-----------------------------------------
--------------------------------------------------SS----------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------SSS-
----------------------------S-------------------------S-------------------------
-------S-----S----S-------S-----------------------------------------------------
--------------------------S-----------------S-----------------------------------
S--------S-------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSS
>forward_526
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------GATGTGCGTTCAGTGCGAC----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------
>reverse_1708
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------AAACTCTATTTCCGCGTGCG---------------------------------
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------
>forward_1233
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------CATGTAAGCTCCCCCTCGTC-----------------------------------------------
--------------------------------------------------------------------------------
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------
>reverse_2077
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------CAAT
GTTCCAAGAGGCAAGGC---------------------------------------------------------------
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------
>forward_1458
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------CT
GCGCCAATCACCTAGGTC--------------------------------------------------------------
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------
>reverse_3457
--------------------------------------------------------------------------------
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----------------TGAGATCGCTGAGTCGCTTG--------------------------------------------
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------
>forward_3007
--------------------------------------------------------------------------------
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---------------------------ATACCCTACCCAGGCAGAGG---------------------------------
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------
>reverse_4356
--------------------------------------------------------------------------------
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-----------------------------------CAACCATCAGGCTCGTCACT-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------
