>input_sequence_30702
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----------------------------------------ATGAGAATCGAATCTAGGCCTGCAGCCGGAGTCGCCGCAT
CTG-AAAATCTAGGCATGCATCTCGCCGCCGACTACCCCAACCGCGGCGGTGGCCGCCTCGGCCTAGGGCCATTCGCGGC
TGCCGTGCTCCGCACCGATAACCGTCGCCGTGCGATTGCAGGCGGCGCGGTCCTCGCCTCGGCGCTGCTTCTCGTGGCCA
CACCACGCCTCCGCCACTCGCCGGCGCTCCACCTCTTCGCCGACATGCGCAACCTCCTCGGCGTGCCCAACACCCTCAAC
GTGCTCACCGCCTACCCGCTTCTCCTTGCTGGAGTACCAGGACTTATCCTTTGCCTCTTCGGCAGCGGATGCTTCGGCAT
AAGGTGAGCCA--TGCCCTTTCTCTTGCTCGCACGCCAGCTGTTTGGTGAAATGTCTAGCTTAAAGAACTAAAGAAGTGA
ATACATTTTATTTTTTCTTCACATGATATGCACCATTTGGAGGGTTTTGCTGTACTTGTTTC------------------
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---------T--AAAGAATGCGACGAATAATCAAATTGTCAAATTAGCAGTAACAGACCTTGAACAATATTATGAAGGAG
GCACATCTTATCAATTATGCTTGAGAACCTTACAAGAGAGTTCTTAGTGTGTATACC-----------------------
--------------------------------------------------------------------------------
------TAGCAAGTAAGAACACATTATTAATGGATGCTGCGTGATCTAAATGACAGTATTGCTGAAAGGGATGGCCATGA
ACATGATTCACCATGGCCCCGATGAGGCTCCAGCTCCACTTATTGAGAATATGTGATGATGCTCTAATCAATGGGAATAT
TTCTTATCCAGTGGGAATTGAAATGTTTTG--CTGTTATATGGGAAATTTACCATGTTTTCCTTCCTATTGCTAGATTTC
TTGATGAAATGCATGAGCTTTGGGAATCCGCAGTCTTGCAACAGAGTAGAATAAATCAGTCAGTGGGATTTGAA-TGTGG
GTGGTAGGCTAAACTGT-TCAGTTAAGATGTGTGTGATATTCCTGTTTGCAGAAACCTGTTATTTAGTGCACAACTATT-
GTCCTGTGGCTTGCTGCCTAAACAATTTTGC---TATCATTGTTAAAAGAACAGGCCGGAGTGAAATGATAGTGTGCTCC
TTTCATTGTGTTAAGTTTCACAGAAGAAAAATTTGTAGCTGAGATTTGGCACTTCAAATAAAATTGTCTTCTTGTGTTCT
GCTGAATATGTCAAATGAATTATACTGGTGTTTAATAAAACCTATGTTAC-TTTGTGGAAATTATGTAGCTTAAGGTGGG
AGGCCTTGGGATGGTTCCTCTTCTATGCAGGGAATGTAGGGGCAGCATTTGGCTCAGCTTACTATCACCTCAAGCCAGAT
GATGACCGGTTAATTTGGGACAGGTTGCCGGTATTCTAAACATTTCTTCTTTCTGCCATCCTCCCCTCTGCAGTTTCCTA
ATTATTAGTTGGTCTTTTTGGTGTACTTAGGGAGTTT----TTTGTTATTTTAACTTCTGATTTACATAGTTTGGACTCT
GATGGTAAATTACTCTGTTAAAAATGCAGTTTGCCTACTTACATTTTAAATCCAAGCATTCACCATAGGCGAAAAATATC
TGTATCTGGGTTTCCATGTGATTTTGATATGAAATATTATTGTGCTATGTATCTGATCTGAATATTCTTTTGCTGCATAA
ATCAATGTGATCAATGAGTTTTGACAAAGCTTTTGTTGAGACGAATGTTTACTGGATGCTCTCACAATGCAGATGATGAT
GTCGGCCTCCTCGCTTTTGTCGATATTGGTAATTGAAAGAGTTGATGAGAGGGCTGGATTATCTTGTTTGATCTCGCTCT
TGTCTCTTTTATTGGTGAGCAGTGTGTGTGAAAGGTATGGACAAGTGCGCAGTTGTTGAGCTTCTTTATTCTAATATCGA
TGTCAAATAAATTCTGAAAATGTGTTATATGTAATGTGTTGTTCTGGCTTGTCTGGCTGCAGGATTCTTGATGATATGCG
CCTGTGGGTAGTTTTAAACCTGGTTCCTTGTGTTGCAATTCCTGCACTGCTATTCTTGTTCCCGCCAAAGTATACACACT
CAAGATTTTGGTTTCTTGCTACAGGTAAGGTAACAGCGAATTGATCTAATACATCTGAACTTGTTAACCTTAAAAAAAAC
TCTTATTTAATTGGTATCTCGGTGCAGGCTTTTACCTTCTGGCAAGATTTGAAGGCCTTGCCGACAGAAAGGTTTACAGT
GTGAATAGATACTTCATTAGCGGCCATTCCTTGGAGCACCTTTGTTTCGCCATGGTTACATTGATACTTATTGTGATGCT
ATCCTTCAGAAATATTAAGATCACCAGGTACCAATCAACCGATGTTCGTCACATTTAGATTCTCTGAAGAGCTGCTTTCT
TGAATCACTCTGGTCAGTTTGATTTGGTACTTCGTTAGGGTCTGTTACTCGTAAAGGTGGTTGGTCCTCTCCAAAGTAGA
TAGTAAAATGCTAGTAGTTGCTTAGTACCGATTGCCTCTGTAGTTCATTGCGCTTGACAAATCGTATGCACAAAACACAA
GCTACAAGCTTTAGATTAATCTACCATTC--TGTCTTCTTGACAGGGACTCGTGA-------------------------
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-----------------------------------
>chr3A_1_TraesCS3A01G310900
TGAAATGGTTGGGCTTACCATCTAAAATAACATGACTCCCTCCGTTCCATAACAAGCATTATGGAATGGGGGAGTAGTGT
TTTGTCAAAAATACAAAAATGGTGCTCTCTCAGACAAAAAGTGTTATCACTGCTCGCCGATCTTCTTTGATCAAGCATTG
AAGCAAATTAGAATTGGCGACACAACTTAATTGAAGAAAAAAGTGTTACGGGCTATCCATTTGTTTGACCATTTTGGCTT
TTGGGAACAACTCGATGAATTTAGTAGATCCTTTTAGGAGGTAAACTTTACTCTCGTGAGATCAGGGGGTAAGCGAATAA
GGTAGCACACAAAGAGATAAGGTTGATGGTGTTTTATTTCACCATATTCCCCCCTTTTGCAAGCTCTGTTTCCTTGTATT
AACATTTGTTAATCAATATGTACTCCCTTCATTTCATATTTCTTGTCGTGGTTTTACTTTAAAATTTAAATTAAAACATG
GAATTTGAAACTAAAACCACAACAAAATATATGGAATGGAGGGAGTACTATTTAAATAGTGTGGTACGGTTTTAAAAAAG
ATGGCAGAACAACATACGAAAAATGCCTCCTATTTAAGAGTATTTGTACTCCCTTCGTCCCATAATTTAAGATGCTATTG
CATCTCACATATTAGATATAATAGCATCTTATATTATGGGACAGAGGGAGTCCTATTTTAACAATACATTTCTATTGGCA
ATAGAATACCAACTTCCTCACACATCAGTTTGCTCGGAAAGAATGTCTTAGATAGTTGGGATAAAGTAGTTTGTGTTTTT
TAGGGGAGAAATACTAATTTATGGGTTTTTTAGAATCCAAATACTAATTTATGTAGCAGTTGTTCTTTAGAATTTGTTTC
TTGAGAGTCATCAGATTTTTTAGCTTTTTTTTTAGACAAATCAGATTTTTTTTAGCTGATGTGTGGTGCAAAGGGAGAGA
GAATCCCTAAAAATGAAGGCCCAAAAGAATAAGACGGCCCATGAGAATCGAATCTAGGCCTGCAGCCGGAGTCGCCGCAT
CTG-AAAATCTAGGCATGCATCTCGCCGCCGACTACCCCAACCGCGGCGGTGGCCGCCTCGGCCTAGGGCCATTCGCGGC
TGCCGTGCTCCGCACCGATAACCGTCGCCGTGCGATTGCAGGCGGCGCGGTCCTCGCCTCGGCGCTGCTTCTCGTGGCCA
CACCACGCCTCCGCCACTCGCCGGCGCTCCACCTCTTCGCCGACATGCGCAACCTCCTCGGCGTGCCCAACACCCTCAAC
GTGCTCACCGCCTACCCGCTTCTCCTTGCTGGAGTACCAGGACTTATCCTTTGCCTCTTCGGCAGCGGATGCTTCGGCAT
AAGGTGAGCCA--TGCCCTTTCTCTTGCTCGCACGCCAGCTGTTTGGTGAAATGTCTAGCTTAAAGAACTAAAGAAGTGA
ATACATTTTATTTTTTCTTCACATGATATGCACCATTTGGAGGGTTTTGCTGTACTTGTTTC------------------
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---------T--AAAGAATGCGACGAATAATCAAATTGTCAAATTAGCAGTAACAGACCTTGAACAATATTATGAAGGAG
GCACATCTTATCAATTATGCTTGAGAACCTTACAAGAGAGTTCTTAGTGTGTATACC-----------------------
--------------------------------------------------------------------------------
------TAGCAAGTAAGAACACATTATTAATGGATGCTGCGTGATCTAAATGACAGTATTGCTGAAAGGGATGGCCATGA
ACATGATTCACCATGGCCCCGATGAGGCTCCAGCTCCACTTATTGAGAATATGTGATGATGCTCTAATCAATGGGAATAT
TTCTTATCCAGTGGGAATTGAAATGTTTTG--CTGTTATATGGGAAATTTACCATGTTTTCCTTCCTATTGCTAGATTTC
TTGATGAAATGCATGAGCTTTGGGAATCCGCAGTCTTGCAACAGAGTAGAATAAATCAGTCAGTGGGATTTGAA-TGTGG
GTGGTAGGCTAAACTGT-TCAGTTAAGATGTGTGTGATATTCCTGTTTGCAGAAACCTGTTATTTAGTGCACAACTATT-
GTCCTGTGGCTTGCTGCCTAAACAATTTTGC---TATCATTGTTAAAAGAACAGGCCGGAGTGAAATGATAGTGTGCTCC
TTTCATTGTGTTAAGTTTCACAGAAGAAAAATTTGTAGCTGAGATTTGGCACTTCAAATAAAATTGTCTTCTTGTGTTCT
GCTGAATATGTCAAATGAATTATACTGGTGTTTAATAAAACCTATGTTAC-TTTGTGGAAATTATGTAGCTTAAGGTGGG
AGGCCTTGGGATGGTTCCTCTTCTATGCAGGGAATGTAGGGGCAGCATTTGGCTCAGCTTACTATCACCTCAAGCCAGAT
GATGACCGGTTAATTTGGGACAGGTTGCCGGTATTCTAAACATTTCTTCTTTCTGCCATCCTCCCCTCTGCAGTTTCCTA
ATTATTAGTTGGTCTTTTTGGTGTACTTAGGGAGTTT----TTTGTTATTTTAACTTCTGATTTACATAGTTTGGACTCT
GATGGTAAATTACTCTGTTAAAAATGCAGTTTGCCTACTTACATTTTAAATCCAAGCATTCACCATAGGCGAAAAATATC
TGTATCTGGGTTTCCATGTGATTTTGATATGAAATATTATTGTGCTATGTATCTGATCTGAATATTCTTTTGCTGCATAA
ATCAATGTGATCAATGAGTTTTGACAAAGCTTTTGTTGAGACGAATGTTTACTGGATGCTCTCACAATGCAGATGATGAT
GTCGGCCTCCTCGCTTTTGTCGATATTGGTAATTGAAAGAGTTGATGAGAGGGCTGGATTATCTTGTTTGATCTCGCTCT
TGTCTCTTTTATTGGTGAGCAGTGTGTGTGAAAGGTATGGACAAGTGCGCAGTTGTTGAGCTTCTTTATTCTAATATCGA
TGTCAAATAAATTCTGAAAATGTGTTATATGTAATGTGTTGTTCTGGCTTGTCTGGCTGCAGGATTCTTGATGATATGCG
CCTGTGGGTAGTTTTAAACCTGGTTCCTTGTGTTGCAATTCCTGCACTGCTATTCTTGTTCCCGCCAAAGTATACACACT
CAAGATTTTGGTTTCTTGCTACAGGTAAGGTAACAGCGAATTGATCTAATACATCTGAACTTGTTAACCTTAAAAAAAAC
TCTTATTTAATTGGTATCTCGGTGCAGGCTTTTACCTTCTGGCAAGATTTGAAGGCCTTGCCGACAGAAAGGTTTACAGT
GTGAATAGATACTTCATTAGCGGCCATTCCTTGGAGCACCTTTGTTTCGCCATGGTTACATTGATACTTATTGTGATGCT
ATCCTTCAGAAATATTAAGATCACCAGGTACCAATCAACCGATGTTCGTCACATTTAGATTCTCTGAAGAGCTGCTTTCT
TGAATCACTCTGGTCAGTTTGATTTGGTACTTCGTTAGGGTCTGTTACTCGTAAAGGTGGTTGGTCCTCTCCAAAGTAGA
TAGTAAAATGCTAGTAGTTGCTTAGTACCGATTGCCTCTGTAGTTCATTGCGCTTGACAAATCGTATGCACAAAACACAA
GCTACAAGCTTTAGATTAATCTACCATTC--TGTCTTCTTGACAGGGACTCGTGACTACAACTCCACCATTGCTTGTTTG
TAATACATGGCAAATTTCCTCTCAGAATTTGTATGTTCGGAAGAGCCCCTCCAGACTCCGGAAGCACCTGAAGAAACGTA
AATTGTTGATCTATGTATCCTATTTTCCCACTACCTGGGTGATTGGCGCCCTCCATCCCTAAGTGGCATAGATAAGTCCT
GTGAGATTATTTCAA-GTGTGTTCATGT-GTGAGTTGTTTTTGTTTGGAGCTTGTTAAC---------------ATTGGA
GGACTACACTGCAATTTATACAGATCTCAGCTGTAACAAAACCATAGATTTGTTGCTCACCATAGCTTGCATC---CGCT
GATTGTTTGAGGTTTGTTCAGTTGATTTTCCTCGAGAAAAAAAGGATTGTTCAGTAGGACTGTACAAGTGTACATTTGTA
GTGGGCTACTGGGTAACAACAACAAATCTTTGCTCTAGCTCCAGCAGCTGGAGCAGTATGCGGAGATGTTCTTTCTGCAG
AGTCCATGTCACTTCGGTATGGTTTGATTCTAGCCCAGTCTGTTCAGTGTAACAAGCTTGTCACCAATTCCGACAATGTT
GAGGTTATTGAGACAATGATCTGGAGGCACATCTTTGGCAGTACTCCCTCTGGTCCTTTTTACTCTGCACATTGGATTTG
CCGAAAGTCAAACTTTGCTAAGTTTGACCAAATTTATATTAGAAATTATTAGCATCTATAATATCTCATAAATATGATAT
GAAAATATATTCCAAGATGAATCCGATGATATTGGTGTTGTTATGTGAATGTTTATAATTTTTTATATAAACTTGGTCAA
AGTTGGATAAAATTAATTTCGGACAAACCTAATATGCAGAGTAAAAAGTACCAGAGGGAGTACTACCTGCAGCAATCTTC
GACGACTGCTATCATCTCGCTTGTGAATCCCACAAACTTTTTTTTGAACATTATTATATACTCCCTTTGTTCATAAATAT
AAGATGTTTCGGAAATTTCAATATGGACTACATAC
>chr3D_922
CAGAT---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------TTTTTTAGATGA--TGTGGTGTAAAGGAAGAGA
GAATC-----AAAAGAAGGCCCAAAAGAATAAGACGGCCCAAGAGAATAGAATTTAGGCCTGAAGCCGGAGTAACCGCAT
CTGAAAAATCTAGGCATGCATCTCGCCGCCGACTACCCCCACCGCGGCGGTGGCCGCCTCGGCCTAGGGCCATTCGCGGC
AGCGGTGCTCCGCACCGACAACCGTCGCCGTGCGATTGCAGGCGGCGCGGTCCTCGCCTCGGCGCTGCTTCTCGTGGCCA
CACCACGACTCCGCCACTCGCCGGCGCTCCACCTCTTCGCCGACATGCGCAACCTCCTCGGCGTGCCCAACACCCTCAAC
GTGCTCACCGCCTACCCGCTTCTCCTTGCTGGAGTACCAGGACTCATCCTGTGCCTCTTCGGCGGTGGATGCTTCGGCAT
AAGGTGAGCCATATGCCCTTTCCCTTGCTCGCACACCAGCTATTTGGGGAAATGTCTAGCTTAAAGAACTAAAGAAGTGA
TTTTT-----TTTTTGCTTCACATGATATGCATCATTTGGAGGGTTTTGCTATAACTTTTTTTAGGGTCCCGATAACTGC
CACACGTGTGGTGTATCGGGTGGTTGTGCCGCACGCCTCGTGTGGCATGGATAGGAACCCGCCCGCATGACCGCGTCCGG
GCGCGCAAAGCCACAGCCCGCACGTCCGGTGCAGCGCGATCGCCCCGCACGAGCACGTCCGGGCGAGCGAGCGCGCGGCC
CGCACGACCCGTCTCGGCCGTCGCCCCTCCCCGCCTGCGAGCCACACGCCCCGCGTGTCAGTAACCACGCGTCCCGCCGC
GATTGCTATGGTCCGGACCCTCTTCCATGTACGTGTAACTCCAGTTGCCATGTCGCTGAACTGCAGTTGCCATGTCGTAC
AACTGCAGTTGTCATGTCGCTGAACTACAGTTGCCGTGTCGGACAACTACAGTTGCCATGGTTGCTCGTAACTCCAGTTG
CCATGTCGCTGAACTGCAGTTGCCATGGTTGCTCGACTGCAGTTGCCATCTCAGGTTAAGTGCCGGATGCCATTTTTGGG
CAACTGCAGCTGTTGCCATGTATGGTCTGGTCTACTACAGTTGCCATGATTTGAAAACTTTAGGAGTTGCCACCTGCTAA
CACTAGACAGTTGCCATGTAGCACTACAAAAAACAGACGTGGCAACAATAACATGTTCGGGGTAAAAGAGAGTTGCCGTC
TGCTTACAAAGCACACTAGGGCAGTCGCCATGTACCCTACAAAAACACATGGCAACTGATAGCTTTTGGTGTGTGGGAGA
GGAGACGGGCATGTGGACTACGGTGGTATCTTTAGGAGTTGCCACCTACTAACACTAGACAGTTGCCATGTAGCACTACA
AAAAACAGACGTGGCAACAATAACATGTTCGGGGTAAAAGAGAGTTGCCGTCTGCTTACAATCACGAATAGGGCTGTTGC
CATGTAACCTGCAAAAAACATGGCAAATGACACTTGGGTGTGGGAGAGTGGGAAAATGGGCAGTCGTGGGAGATGGTGGA
CAGAAGTCGTGCGGGGCGTGCGGGCGCGACGGCAGTTCCACCGCACGCCCCGAGTCGCAATCGCTGACCTCGGAGGAAAA
ACAGCGTGCGGGCGAACTCCCTCATACGCCACACACGCGAGTTGTCCTACGTGGCACACAAAATCAGCCCTCTCGTGCCA
AGATTCGTGCAAAAGGCACTGGGTGGCGATCGAGGCGTGTGGGCGAGTTGGCTAACGCCCACACGTGTAGGCGTTAGTGT
TTTCGTATTTTGAAAGAATGGGACGAATAATCAAATTGTCAAATTCGTAGTAAAAGACCTTGAACAATTTTGTGAAGGAG
GCACGTCTTATCAATTATGCTTGAGAACCTTACAAGAGAGTTCTTAATGTGTACTAGTACCTACTCCCTCCGTTCGGAAT
TACTTGTCACAAAAATGGATGTATTTATAACTAAAATACATCTAGATACATTCATTTCTTGGACGAGTAATTCCGAACGG
AGGGAGTAGCAAGTAAGAGCAC-TTATTAATGGACGATGCCCGAATTAAATGTGAGTATTGCG--AAAGGATGGCCATGA
ACATGATTCACCATGGCCCA-ATGAGGCTCCAGCTCCACTGATTGAGAATATGCAGTAATGCTCTAATCAAAGAGAATAT
TTCTTATCCAGTGCTAATTGAATTTTTTCG--CTTTTATATGGAAATTTTACCGTGTTTTCCTACCTATTGCTAGATTTC
TTGATAGAATGCATGAGCTTTAGAAATCCGCAGTCTTGCAACAGAGTAAAATAAAACAGTCAGTGGGATTTGAAATGTGG
GTGGTAGGTTAAGATGTGTCAGTTAAGATGTGTATGATATTCCTGTTTGCAGAAATCTGTCATTTAGTGCACAACTAATC
GTCCTGTGGCTTGCTCCCTAAAGAAATATTCTAGTATCATTGTTAAAAGAACAAGCCGGAGTGAAATGATAGTGTGCTCC
TTGCATTGTGTTAAGTTTCACAGAAGTAAAATTTGTAGCTGAGATTTGTCACTTCAAAGAAAATTTTGTTCTTGTGTTCT
GCTGAATGTGTCAAATGAATTATACTGGTGTTTAATAAAACCTATTTTACTTTTGTGGAAATTATGTAGCTTAAGGTGGG
AGGCCTTGGGATGGTTCCTCTTCTATGTGGGGAATGTAGGGGCAGCATTTGGCTCAGCTTACTATCACCTCAAGCCAGAT
GATGACCGGTTAATTTGGGACAGGTTGCCGGTATTCTAAACATTTCTTCTTTCTGCCATCCTCCCCTCTGCAGTTTACTA
ATTATTAGTTTGTCTTTTTGGTGTACTTAGGGACTGAGCTATTTGTTAATTAAACTTCTGATTTGCCTAGTTTGGACTCT
ATTGGTAAATTACTCTGTTAAAAATGCAGTTTGCCTACTTACATTTTAAATCCAAGCATTCACCATAGGTGAAAATTATC
TGTATCTGGGTTTCTATGTGATTTGGGTATT-AATATTATTGTGCTATGTATCTGATCTGAATGTTCTTTTGGTGCATAA
ACCAATGGGATCCATGACA-CC---------TTTGTTGAGACGAATGTTTACTGGATGCTCTCACAATGCAGATGATGAT
GTCGGCCTCCTCGCTTTTGTCGATATTGGTAATTGAAAGAGTTGATGAGAGGGCTGGGTTATCTTGTTTGATCTCGCTCT
TGTCTCTTTTACTGGTGAGCAGTGCGTGTGAAAGGTATAGACAAGTGCCCAGTTGTCGGGCTTCTTTATTCTAATATCGG
CGGCAAATAAAATGAGTAC-----------GTAATGTGCTGTTCTGGCTTGGCTGGCTGCAGGATTCTTGATGATATGCG
CCTGTGGGTAGTTTTAAACCTGGTTCCTTGTGTTGCCATTCCTGCAATGCTATTCTTGTTCGCGCCAAAGTATACACACT
CAAGATTTTGGTTTCTTGCTACAGGTAAGGTAACAGTGAATTGATCTAATGCATCTAAACTTATTAACCTT-AAAAAAAC
TCTTATTTAATTGGTATCTCTGTGCAGGCTTTTACCTTCTGGCAAGATTCGAAGGCCTTGCCGACAGAAAGGTTTACAGT
GTGAATAGATATTTCATTAGCGGTCATTCCTTGGAGCACCTTTGCTTCGCCATGGTTACATTGATACTTACTGTGATGCT
ATCCTTCAGAAATATTAAGATCACCAGGTACCAATCAACTGATGTTAGTCACATTTCGTTTCTCTGAAGAGCTGCTTTCT
TGAATCACTCTGGTCAGTTTGATTTGGTAGTTTGTTA-GGTTTGTTACTCGCAAAGGTGTTTGGTCCTCTGTAAAGTAGA
TAGTAATATGCTAGTAGTGGCTTAGTGCCAATTGCTTCTGTAGTTAATTGCGCTCGACAAATCATATGAATAAAACGCAA
GCTACAAGGTTTGGATTAATCTACCATTATGTGTCTTCTCGGCAGGGACTCGTGACTACAACTCCACCATTGCTTGTTTG
TAACAAATGGCAAATTTCCTGTCAGAATTTCTATGTTCGGAAGGGCCCCTCCAGAGTCCGGAAGCACCTGAAGAAACATA
AATAGGTGATCTATGTATCCTATCTTTCCACTACCTGGGTGACTGACGCCCTCCATCCCTGGGCGGCATAGACAAGTCCT
GTGAGATTATTTCAATGTGTGTTCATGTCGTGAGTTATTTGTGTTTGGAGCTTGTTAACTGGACCAGCAGAAACATTGGA
CGACTATATTGCAATTTATACAGATTTCAGCTGTCAAAAAACCATAGATTTGTTGCTCATCATAGTTTG---C---CGCT
GATTGTTTGAGGTTTGCTCAGTTGATTTCCCTCGAAAAA-----------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------
>chr3B_929
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------TTTTTAGATGA--TGTGGTGTAAAGG--GAGA
GAATC-----AAAAGAAGGCCCAAAAGAATAAGACGGCCCAAGAGAATAGAATCTAGGCCTGAAGCCGAAGAAACCGCAT
CTG-AAAATCTAGGCATGCATCTCGCCGCCGACTACCCCCACCGCGGCGGTGGCCGCCTCGGCCTAGGGCCATTCGCGGC
AGCCGTGTTCCGCACCGACAACCGTCGCCGTGCGATTGCAGGCGGCGCCGTCCTCGCCTCGGCGCTGCTTCTCGTGGCCA
CACCACGACTCCGCCACTCGCCGGCGCTCCACCTCTTCGCCGACATGCGCAACCTACTCGGCGTGCCCAACACCCTCAAC
GTGCTCACCGCCTACCCGCTTCTCCTTGCTGGAGTACCAGGACTTATCCTGTGCCTCTTCGGCGGTGGATGCTTCGGCAT
AAGGTGAGCCATATGCCCTTTCCCTTGCTCGCACACCAGCTATTTGGGGAAATGTCTAGCTTAAAGAACTAAACATGTGA
ATATATA-TATTTTTGCTTCACATGATATGCATCATTTTGAGGGTTTTGCTATACTTGTTTC------------------
--------------------------------------------------------------------------------
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---------TTTAAAGAATGGGATGAATAATCAAATTGTCAAATTCGCAGTAAAAGACCTTGAACAATTTTGTGAAGGAC
GCACATCTTATCAATTATGCTTGAGAACCTTACAAGAGAGTTCTTAGTGTGTACTAGTACCTACTCCCTCCGTTCCGATT
TACTCGCCGTGATTTTAGTTCAAATTTGAACTAAAACCAC---------------------GACGAGTAAATCGGAATGG
AGGGAGTAGCAAGTAAGAGCAC-TTATTAATGGACGATGACCGAATTAAATGTGAGTATTGC--AAAAGGATGGCCATGA
ACATGACTCACCATGGCCCA-ATGAGGCTTCAGCTCCACTGATTGAGAATATGCAGTAATGCTCTAATTAAAGAGAATAT
TCCTTATCCAGTGGAAATTGAATTTTTTTTCTCTTTTATATGGAAAATTTACCATGTTTTCCTACCTATTGCTAGATTTC
TTGATGGAATGCATGAGCTTTAGAAATCCGCAGTCTTGCAACAGAGTAGAATAAAACAGTCGGTGGGATTTGAAATGTAG
GTGGTAGGTTAAAATGTGTCAGTTAAGATGTGTATGATATTCCTGCTTGCAGAAGTCTGTCATTTAGTTCTCAACTAATC
ATCCTGTGGCTTGCTCCCTAAAGAAATATTCTAGTATCATTGTTAAAAGAACAAGCCGGAGTGAAATGATAGTGTGCTCC
TTGCATTGTGTTAAGTTTCACAGAAGTAAAATTTGTAGCTGATATTTGTTACTTCAAAGAAAATTGTGCTCTCATGTTCT
GCTGAATGTGTCAAATGAATTATACTGGTGTT-AATAAAACCTATGTTACTTTTGTGGAAATTATGTAGCTTAAGGTGGG
AAGCCTTGGGATGGTTCCTCTTCTATGTGGGGAATGTAGGGGCAGCATTTGGCTCAGCTTACTATCACCTCAAGCCAGAT
GATGACCGGTTAATTTGGGACAGGTTGCCGGTATTCTAAACATTTCTTCTTTCTGCCATCCTCCCCTCTGCAGTTTCCTA
ATTATTAGTTTGTCTTTTTGGTGTACTTAGGGACCGAGCTATTTGTTAATTAAACTTCTGATTTGCCTAGTTTGGACTCT
ATTGGTAAATTACTCTGTTCAAAATGCAGTTTGCCTACTTACATTTTAAATTCAAGCATTCACCATAGGCGAAAAATATT
TGTATCTGGGTTTCTATGTGATTTAGATATT-AATATTATTGCACTATGTATCTGATCTGAATGTTCTTTTGGTGCATAA
ACCAATGGGATCCATGAGACCC---------TTTGTTGAGACGAATGTTTACTGGATGCTCTCACAATGCAGATGATGAT
GTCGGCCTCCTCGCTTTTGTCGATATTGGTAATTGAAAGAGTTGATGAGAGGGCCGGGTTATCTTGTTTGATCTCGCTCT
TGTCTCTTTTACTGGTGAGCAGTGCGTGTGAAAGGTATAGACAAGTGCCCAGTTGTGGGGCTTCTTTATTCTAATATCGG
CGTCAAATAAATTCTGAAAATGTGT---ATGTAATGTGTTGTTCTGGCTTGGCTGGCTGCAGGATTCTTGATGATATGCG
CCTGTGGGTAGTTTTAAACCTGGTTCCTTGTGTTGCCATTCCTGCAATGCTATTCTTGTTCCCGCCAAAGTATACACACT
CAAGATTTTGGTTTCTTGCTACAGGTAAGGTAACAGTGAATTGATCTAATGCATCGAAACTTATTAACCTTAAAAAAAAG
TCTTATTTAATTGGTATCTCGGTGCAGGCTTTTACCTTCTGGCAAGATTCGAAGGCCTTGCCGACAGAAAGGTTTACAGT
GTGAATAGATATTTCATTAGCGGTCATTCCTTGGAGCACCTTTGCTTCGCCATGGTTACATTGATACTTACTGTGATGCT
ATCCTTCAGAAATATTAAGATCGCCAGGTACCAATCAACTGATGTTAGTCACATTTCATTTCTCTGAAGAGCTGCTTTCT
TGAATCACTCTGGT-----TGATTTGGTAGTTTGTTAGGGTTTGTTACTCGCAAAGGTGTTTGGTCCTCTCTAAAGTATA
TAGTAATATGCTAGTAGTTGCTTAATACCAATTGCTTCTGTAGTTAATCGCGCTTGACAAATCATATGAATAAAACACAA
GCTACAAGGTTTGGATTAATCTACCATTATGTGTCTTCTCGACAGGGACTCGTGACTACAACTCCACCATTGCTTGTTTG
TAACAAATGGCAAATTTCCTGTCAGAATTTCTATGTTCGGAAGAGCCCCTCCAGAGTCCGGAAGCACCTGAAGAAACATA
AATAGGTGATCTATGTATCCTATCTTTCCACTACCTGGGTGACTGACGCCCTGCATA-----------------------
--GACATTATTTCAATGTATGTTCATGTCGTGAGTTGTTTGTGTTTGGAGCTTGTTAACTTGACCAGCAGAAACATTGGA
GGACTATATTGCAATTTATACAGATTTCAGCTGTCACAAAACCATAGATTTGTTGCTCATCATAGTTTG---CGTCCGCT
GATTGTTCGAGGTTTGCTCAGTTCCTCG---------AAAAAGGGATTGTTCAGTAGGGTTGTACATCTGTACTTTGCTA
CTGGCTA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>SNPs
SSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---SS-------S-----S-----
-----SSSSS---S---------------------------S------S-------------S---------SS------
---------------------------------------S----------------------------------------
S-----------------S-------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------S------------S-S--------------
----------------------S-----------S------S-----S--------------------------------
---S--SS-------S----------------S------------------S----------------------------
--------------------------------------------------------------------------------
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--------------------S------------------------S-------S--------------S--S--------
-----------------------------------------------------SSSS-----------------------
--------------------------------------------------------------------------------
------------------S---S-----------S-S---SS--SS------SS--------SS---S------------
-------------------SS-------------------S------------SSS-S-------------S-S------
--------------S-------S-S---------S--------S-------------------S----------------
------S--------------S-S-------------------------------S------------------------
--------S----S-------------------S---------------------S----S----------------S--
---------------S------S--S-S-S-----------------------S--------------------------
--S-----------------------S---------------------S---------S--------S------------
-------S------------------------------------------------------------------------
---------------------------SS---------------------------------------------------
--------------------------------------------------------------------------------
----------S----------------------S-SS-----------S--S------------S-S-------------
SS------------------------------------------------------------------------------
--------------S---------S-----SS-------------------------------S--------S-------
-S-----S----S-----SSSSSSSSSSSSS-------------------------------------------------
---------------------------------------------------------S----------------------
-----------S------------S-------------S---------S-------S-S--------------------S
S------------------------SSS-----------------------S----------------------------
------------------------------------S---------S---------------------------------
------------------------------------S-------------S-----S-----S-----------------
-------------------------------------------------S------------------------------
-----------S-----------S--------------------S-------------------------S---------
---------------------------------------S------S---------S-S---------------------
-----------------------------S--S--------S---------S-------S-----------S--------
------S----------------------S-----S---------S-----------------S----S-S---------
--------S---S---------------S----------S----------------------------------------
---S-S--------------S---------S------------------------S---------------------S--
---S-S-----------------S--S---------------S--S--------------SS-S--------S-------
----------------------------------------S---------------------------------------
------S-S----------------S--------S------------------------S-----S---SSS--------
----------------S-----------S------S------S---------------SS------SS-----S--SS--
S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_316
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------TGAGATCAGGGGGTAAGCGA----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------
>reverse_3629
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------AGGGAATGTAGGGGCAGCAT--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>forward_3060
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
ACATGATTCACCATGGCCCC------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>reverse_4172
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------TTGGTGAGCAGTGTGTGTGA-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
>forward_3081
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------ATGAGGCTCCAGCTCCACTT---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------
>reverse_5016
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CTCCGGAAGCACCTGAAGAA-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------
