>input_sequence_30574
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-----------------------------------------------ATGATCCCGACGACGCGGCTGCTCAGCTGCTGC
TACTTGCTGTCGTTCATCTTCATCGCCGTCGCCCCGCGTGCGATCGATTCCAAGCTGGTGACCAGCCTCCCCGGCTTCGA
CGGCCGCCTCCCCTTCCGCCTCCACACTGGGTGTGTGTGTACCCTCATCCCCATCTCAATCTCCATGAGCCAAGTCTACT
TCCTCCGTTGGATTCT--TAAGTCGACATGTCCATGAATGAATTGAATCGCAAGGTACGTGGAGGTGGACCAGGGCACGG
AGCTCTTCTACTACTTCGTCGAGTCGGAGGCCGGCGGCGAGGGGGTACCTTTCCTTCTCTGGCTCACCGGCGGCGACCGC
TGCTCCGCCTTCAGCGGCCTCGCCTACGAGATCGGTCTCTCTTTTGATTCAATCAACTAGAATTGCTGACTGCTGGGTCG
TC-----------TCTCCGTCTGCAGCATGATCAC---ATCATTCATGTATAGTGCAGGTCCCGTCAGGTTCGTCCTGGA
GCCCTACAATGGCAGCTTACCACGCCTGCACATCAACCCAAACTCATGGACAAAGGTCTTCCTAGCCAGCTTCTTCTTCC
ATCTGAAGCAGCTCGCTGCCTGTAATGTATCTGTACGCATGCTGCTTGC------ACCCTGACAGTACCAAGGGAATGT-
----GCAGGTGGCACACATCCTGTTCGTCGATTCGCCGGTCGGTGCTGGATTTTCCTTTGCCAAGCAACCCAAGGGGTAC
GAGGTCGGGGATGTGTCCTCCTCATTGCAGCTCCATGACTTCCTCATCAAGTGGTTCAGCGACCACCCCAAATACCTGAA
AAATCCTTTCTATATCGGTGGAGATTCCTATGCCGGAAAACTTGTGCCATATATCGCACACATCATTTCACAAGGTAC--
ATA-----TATATACCCTACGCCCTGTTTGGCAACTCCATCTGCGTCAATCTGTGTGCAAACTAGTA--TCATCAACTGT
TTCAATTCACTATAAGCTCTATCTCAAGTTCTGAACTGCATATGAATTCATGCTCACTAGCTTCCCTCTTCAGGTATTGA
AGCAGGAAATAGTCCCCGCATTAATCTTAAGGTACCATAATGACATAATCATTACTACTTAGTTGTTTTAGCGATAACAG
TAAGTATCATAAATCATTATCATA--------------------------------------------------------
-------------------------------------------------TATGTATGTTTGTTGATTTCAGGGATATCTA
GTAGGCAACCCATCGACTGGTGAAAGCATCGATATAAGCTCTAAAGTGCCATATGCTCACGGAGTTGGTATAATATCAGA
TCAGTTGTATGAGGTAAACTAGACTCGAGCCTAATATCAGCCATGTATATACTCCATTTTATCGCAATCGAAGTGGCCAT
TAATATTTTCTTTGCTGATAATATATGTAGACCATATTGGGCCATTGCCAAGGACAGGACTACATGTTCCCGACAAATGA
TTTGTGCGCCCAAGCTCTGGATGATTTCAATCATGTAAGAAGAAGAAAGAAACATCTTATGCTAGAATTGACTTGACCGT
TCGCAATGCAACTTTTGCAGCTTTTGTCCGAAGTTCAGCAGGCCCAGATTTTGCTGGACACCTGCGTTTTTGCGTCCACT
CCAGCCCGGCCAGAAGCTGATAGTGGGACCGAGTACTCGGGTGGCGCTGGTAGGAGGATCCTAGTTGGAAATCCGCCACC
TCGCCCTCCATTTGGATGTGTTGTAAGTAGTAATGTCTCCATTCCTCATGTAGTACAATGCGAGTTA-------------
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------------GATAGTT-TCCATCGCTTTTAACAATTTATTACTCCCTCTGTCCCATAA-------------------
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-----------------------------------------------------------------TATAAGAACGTTTTT
GACAGTATGCTAGTGCCAAAAACGTTCTTATATTTTGGGACGGAGGGAGTAGTACTTAGCCAAGAAAAATGCAACTTA--
---------------------TAGCCAATATTGTGT-AGACTTATGGG---TACTACCTACCGTATTTTTCCATCACTTT
G-ACAACTTACAAGTACATACCCGAGAATAAAAGTA--------------------------------------------
--------ACTTATCAGTGCTATGTATACCAATATTGTGGCAGACTTATGGGTACTACCTATCGTATTTCTGGGCAAACG
CGGAGGTGACCCGAAATGCTCTTGGGATCAAGGAGGGGAGCGTGGAGGAGTGGGTGAGGTGCCACAACGGCGATCTGCCC
TACACAATCGACCTCAGGAGCAGCATTGAGTACCACCGGAACGTCACGGCCAATGGTGGCTACCGTGCGCTTGTATACAG
CGGCGACCATGACGCATTGGTGCCGCACCTGGGGACACAGGCGTGGATCAGGTCACTTGGCTTCCCCGTGGCACACCATT
GGAGGGCGTGGCATCTCCATGGCCAGTCTGCTGGGTACC---------ACACCATCGTTGCCTCGCTACTA------CTA
CTTCTTACTTCACGCTGACTGTATTCTGCTTATTGTTGTCGATGCATGTATTTCTTGCAGGTTCACCTTAACTTACTCCA
ACAACATGACATTCACAACCATTAAGGTAACACTTGCGTTCTTTTTTTTGCCTGGATACACAAACTGGTTCTGATCAAGT
TCGATTCGGTTGCTGCAGGGCGGCGGGCACACCGCGCCGGAGTACGAGCCCGAGAGGTGCTTCGCCATGTTCAGCCGATG
GATACTCGGCGAACCACTCTAG----------------------------------------------------------
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>chr3A_1_TraesCS3A01G329200
CCTACATTATTTTTAGGTG-CTCTTTTGTGTTCGTTTAGAGTTTGTGTTCTATTTAAGAAAACGAGACGACGGA----GG
CTCTCTGAAGTTGAAATAAGGTTCTTCCGCCTAAGG-CC-CGTTCTGGTGGTGCGTCTAGCATCATCAGAGGGCGTGTGG
AGATTTGTTCCCGACGGATCTCGCGGGATTCGGTCAGCGTTTGTCTTTGGTGGATCCACTTGGATCTGGTCTTCGTTCAT
ACGTGTTCGTATCTCTTCAGGTCAAATCCTTTCGGTCTACGTTTCTCTTCGTCGGCGGCAGCTGTTGTTCTGGTGCGTTG
ATCCTCTTGGGCCTTAGCACGATGACTTCCCGACTGTTTACTACTACAAGGTTTGTCCGGCTCCTATGATGGAGGGACGA
TGATGGCGACGCGCCTTCGGCTTGCTCCAGTGATTGTAGTCGTCGCTATGTGGTCTATGGATCTGGATCTAATTTTCACT
TTTAGTGTTCTTTGTACTACCTTGACAGTTGATGAATACTCCCTCCGTTTCTAAATATTCGTCTTTTTAGAGATTTCAAA
TGGATTACCACATACGGATATATATATATATATTTTAGAGCGTAGATTCACTTATTTTGTTCCATATATAGTCACTTGTT
GAAATTCCTAGAATGATAAATATTTAGGAACGGATGGAGTAGATCGCAAATTTTTATTGT--------------------
------------------------------------------------AAAAAAAAAGTTACTCTCACTAAGTTACTCCC
ACTATTACTAGCGGAGGCGTGTCACTGATTGGAATTCACCGAGCTAACGTGA--TGAGTTTCGGTGATCAGATTCGTTTC
CAAGCGGCGGATGTTGCCAGTCGTCCTGCCGTGACACGTCTGGATAAGAGGCATGACACGTGTGGTAGAGC-AGTTGAGA
CCGGCAGAAAATCTCCAACACCTCTCTAGACAGTTCCGGCCAAAACTATGCCAGCAGTTGATCCGC---------TCTGC
TCTGCTCTGCCGCCGTTGCCGCCGCTAGTCCGAGTACGAGCACTGAGATGATCCCGACGACGCGGCTGCTCAGCTGCTGC
TACTTGCTGTCGTTCATCTTCATCGCCGTCGCCCCGCGTGCGATCGATTCCAAGCTGGTGACCAGCCTCCCCGGCTTCGA
CGGCCGCCTCCCCTTCCGCCTCCACACTGGGTGTGTGTGTACCCTCATCCCCATCTCAATCTCCATGAGCCAAGTCTACT
TCCTCCGTTGGATTCT--TAAGTCGACATGTCCATGAATGAATTGAATCGCAAGGTACGTGGAGGTGGACCAGGGCACGG
AGCTCTTCTACTACTTCGTCGAGTCGGAGGCCGGCGGCGAGGGGGTACCTTTCCTTCTCTGGCTCACCGGCGGCGACCGC
TGCTCCGCCTTCAGCGGCCTCGCCTACGAGATCGGTCTCTCTTTTGATTCAATCAACTAGAATTGCTGACTGCTGGGTCG
TC-----------TCTCCGTCTGCAGCATGATCAC---ATCATTCATGTATAGTGCAGGTCCCGTCAGGTTCGTCCTGGA
GCCCTACAATGGCAGCTTACCACGCCTGCACATCAACCCAAACTCATGGACAAAGGTCTTCCTAGCCAGCTTCTTCTTCC
ATCTGAAGCAGCTCGCTGCCTGTAATGTATCTGTACGCATGCTGCTTGC------ACCCTGACAGTACCAAGGGAATGT-
----GCAGGTGGCACACATCCTGTTCGTCGATTCGCCGGTCGGTGCTGGATTTTCCTTTGCCAAGCAACCCAAGGGGTAC
GAGGTCGGGGATGTGTCCTCCTCATTGCAGCTCCATGACTTCCTCATCAAGTGGTTCAGCGACCACCCCAAATACCTGAA
AAATCCTTTCTATATCGGTGGAGATTCCTATGCCGGAAAACTTGTGCCATATATCGCACACATCATTTCACAAGGTAC--
ATA-----TATATACCCTACGCCCTGTTTGGCAACTCCATCTGCGTCAATCTGTGTGCAAACTAGTA--TCATCAACTGT
TTCAATTCACTATAAGCTCTATCTCAAGTTCTGAACTGCATATGAATTCATGCTCACTAGCTTCCCTCTTCAGGTATTGA
AGCAGGAAATAGTCCCCGCATTAATCTTAAGGTACCATAATGACATAATCATTACTACTTAGTTGTTTTAGCGATAACAG
TAAGTATCATAAATCATTATCATA--------------------------------------------------------
-------------------------------------------------TATGTATGTTTGTTGATTTCAGGGATATCTA
GTAGGCAACCCATCGACTGGTGAAAGCATCGATATAAGCTCTAAAGTGCCATATGCTCACGGAGTTGGTATAATATCAGA
TCAGTTGTATGAGGTAAACTAGACTCGAGCCTAATATCAGCCATGTATATACTCCATTTTATCGCAATCGAAGTGGCCAT
TAATATTTTCTTTGCTGATAATATATGTAGACCATATTGGGCCATTGCCAAGGACAGGACTACATGTTCCCGACAAATGA
TTTGTGCGCCCAAGCTCTGGATGATTTCAATCATGTAAGAAGAAGAAAGAAACATCTTATGCTAGAATTGACTTGACCGT
TCGCAATGCAACTTTTGCAGCTTTTGTCCGAAGTTCAGCAGGCCCAGATTTTGCTGGACACCTGCGTTTTTGCGTCCACT
CCAGCCCGGCCAGAAGCTGATAGTGGGACCGAGTACTCGGGTGGCGCTGGTAGGAGGATCCTAGTTGGAAATCCGCCACC
TCGCCCTCCATTTGGATGTGTTGTAAGTAGTAATGTCTCCATTCCTCATGTAGTACAATGCGAGTTA-------------
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------------GATAGTT-TCCATCGCTTTTAACAATTTATTACTCCCTCTGTCCCATAA-------------------
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-----------------------------------------------------------------TATAAGAACGTTTTT
GACAGTATGCTAGTGCCAAAAACGTTCTTATATTTTGGGACGGAGGGAGTAGTACTTAGCCAAGAAAAATGCAACTTA--
---------------------TAGCCAATATTGTGT-AGACTTATGGG---TACTACCTACCGTATTTTTCCATCACTTT
G-ACAACTTACAAGTACATACCCGAGAATAAAAGTA--------------------------------------------
--------ACTTATCAGTGCTATGTATACCAATATTGTGGCAGACTTATGGGTACTACCTATCGTATTTCTGGGCAAACG
CGGAGGTGACCCGAAATGCTCTTGGGATCAAGGAGGGGAGCGTGGAGGAGTGGGTGAGGTGCCACAACGGCGATCTGCCC
TACACAATCGACCTCAGGAGCAGCATTGAGTACCACCGGAACGTCACGGCCAATGGTGGCTACCGTGCGCTTGTATACAG
CGGCGACCATGACGCATTGGTGCCGCACCTGGGGACACAGGCGTGGATCAGGTCACTTGGCTTCCCCGTGGCACACCATT
GGAGGGCGTGGCATCTCCATGGCCAGTCTGCTGGGTACC---------ACACCATCGTTGCCTCGCTACTA------CTA
CTTCTTACTTCACGCTGACTGTATTCTGCTTATTGTTGTCGATGCATGTATTTCTTGCAGGTTCACCTTAACTTACTCCA
ACAACATGACATTCACAACCATTAAGGTAACACTTGCGTTCTTTTTTTTGCCTGGATACACAAACTGGTTCTGATCAAGT
TCGATTCGGTTGCTGCAGGGCGGCGGGCACACCGCGCCGGAGTACGAGCCCGAGAGGTGCTTCGCCATGTTCAGCCGATG
GATACTCGGCGAACCACTCTAGTACTCCTAACAGCAACAACCAAGTAGAGAAGGGGGCAAGCCTCACGATTTCAAGTATT
GGGTACCTCTCCACTCCACTAATCAATGGTTTCGCCTACATATGAACTATACTGCCTGGCAGTGTAGTTCGTACTAGAAC
ATATAGGCGTCTGATGCCGCGTCCGTCTATATTGGAGAAAAACACTTAACATATTTTAGAAAGAAAATACGGATACTACA
AATATCTTGTTAAGTATGGTATAGATATATGCGACAAGGAAAATTCTAGGAAGATACAATAAATCTGCATTTTGGTGCAG
CAGACAAAGATTTTACAAATGCAAGGTTCGGAGGGATCACACTGATGCTATTGCTA------------------------
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----------------------------------TACAAATTGTCGTCATGTTTACATACGCTACTGTTCAGAACTAAAG
ATACAGTGATCTCACATTAAATTAACACATGGCTATGGCTGTTGCTTTTCCAATTTCAATTAAATTGGCATATGGTTATG
GCCATTGCTTTTCCAATTTCAGTGCCGCCTCCTTGCACGCCATATTTAAATTGACACACGCGACTTTAGGTCGCGTTAAC
GAGGCCCCACGGCTTTCTTATTCAGATGAAAGAGCATTTTGTCTGTCAATTTACTAAGTGCTTGGCTTGAGGTCCTGAGC
TGGTCTTTTCAAATTCAAGTCCAACAGTAACATTCCAACAGTAACATTCCAACAGTCCAACAGTAACATTCCAACAGTAA
CAATGGTAGCATTCCAACATTCATTAAGAAAATCTTCTAGGATTTTCATGGGCATGACATCGCAATCCTACGTATTTCCT
ATTCATGTACTTCGAATGAATGGAAGAAGCCATTACCGTTCGAGTCTTACGTCAGTCGAACTTCAAAGCAGATTCTATTT
AAAACAAAAACAAAAACTGGAACAGTTGAACCCATTATCAGTGATGCAGGCCTGCGCAGCGAGACACCGGCGCCGATCGA
GCGGTTGAGTGTTAATCTATCGCTACGGACGCGAACAGCT
>chr2A_1
CCTACATCGTTTTTAGGTG-TTTTTTTATGTTCGTCTAGGATTTGTGTTCTGTTCAGGAAGACAAAACGGCGGC----GG
CTTTCTGATGTTGGAATAAGGTTCTCCCTGCCTATGCCC-TGTTCTGTTGATGCGTCTAGCATTATCAGAGGGCGTGTGG
AGATTTGTCTCCGACGGATCTTGCGGGATTCGGTCGGCGTTTGTCTTTGGTGGATCCACTTGGATCCGGTCTTCGTTCGT
ATGTGTTCGTGTGTCTTGAGGTTAGATCTTTCCGGTCTATGCTTCCCTTCATCGGCGGCGGCTGCTATTCTGGTGTCCTG
GTCCTCTTGGGCCTTAGCACGACGACTTCCCGACTGTCTACTACAGCAAGGTTTGCACGGCTTCGACGATGGAGGGGCAA
TGACGGCGGCGCGCCTTGGGCTCGCTCTAGTGATTGTAGTCGTTTTTAGGTGGTCTACGGACCTGGATGTAATTTTTACC
TCTAGCGTTCTTTGTACTGCCTTGACAGTTGATGAATA------------------------------------------
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>chr2B_1
CCTACATCGTTTTTAGGTATTTTTTTTGTGTTTCTCTAGGGTTTGTGTTTTGTTTAGGAAGACAAGGC----GC----GG
CTTTTTGATGTTGAAATAAGGTTCTTCCCGCCTATG-CC-CATTCTGGTGATGCATCTAGCATTATCAGAGGACGTGTGG
AGATTTATCTCCGACTGATCTTGCGGGATTCGGTCGGCGTTTGTCTTTGGTGGATCCACTTGGATCCGGTCTTCGTTCGT
ATGTGTTCGTGTGTCTTCAAGTTAGATCTTTTCGGTCTACGCTTCTCTCCATCGGCGGCGGCTGCTATTCTGGTGCCCTG
GTCCCCTTGGGCCTTAGCACGACAACTTCCCGACTGTCTACTACAACAAGGTTTGCACGGCTTCGACGATGGAGGGGCGA
TGATGGCACCGCGCCTTCGGCTCGCTCTAGTGATTGTAGTCGTCGTTAGGTGGTCTACGGACCTGGATGTAATTTTTACC
TCTGGTGTTCTTTGTACTGCCTTGACAGATGATGAATA------------------------------------------
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>chr3B_3
--TACATCATTTTTAGATATTTTTTGTGTTTGTCTA---GATTTGTGTTTTATTTAGGAAGACGATGC----GGGGGTGG
CTCTTTGAATTTGAAATAAGGTTTTTTCCGTCTAAG-CCCCGTTCTGGTGGTGCGTTTAGCATCATCAGAGGGCGTGTGG
AGATTTGACTTCAACAGAGCTCACATGATTCGGTCGGCGTTTGTCT-----GGATCCACTTGAATGTGATCTTCGTTCGT
ACGTGTTCGTGTGTCTTCAGATTAGATCCTTCCGGTCTACGCTTCTCTTCATCGGCGGCTGTTG---TTCTGGCGCGCTG
GTCCTCTCGAGACTTAGCACAACGACTTT-CGACTGTTTACTATAACAAGGTTGGTCTGGCTCTAATGATGAAGGGACGA
TGATGGTGCTGTGCCTTCAGCTTGCTCCGGTGATTGTAGTATTTGTTAGGTGGTTTGCGGATCTGGATGTAATTTTTACT
TCTAGTGTTATTTGTACTGTCTTGACAATTGATGAATAGAGCGAAAATATTTCTCGTAATTTTTTTTACTTTCATTATGC
TGCTCTCTTTTATGTCTTGAAATGTGCTATTATAGATAAGGCCATTATTATAGATGAGGTCAACCTATGGGTTACTGCAG
GGGCTAAACAATTAGGAAAAATTGTATTGCGCGAGTAATTGTCATGCCGTACTACGGTCTTGTCTAACTCTAAAACTCTA
TCCTTCTCTATTTTAATAGATGAGGCAAAAATTTTGCTTCCGTTTCGGAAAAAAAAGTTCTATGTTACTAAGTTACTCCC
ACTATGC---GCGGAGGCGTGGCACTGATTGGGATTCACCGAGCTGACGTGA--TGAGTTTCGGTGATTAGATTCGTTTC
CAAGCGGCGGATGTTGCCAGTCGTCCTGCCGTGACACGTCTGGCTAAGGGGCATGACACGTGTGGTAGAGC-AGTTGAGA
CCGGCAGAAAATCTCCTCCGCCTT--TAGACAGTTCCGGCCAAAACTATGCCAGCAGTTGATCCGCTGCCCGTGCTCTGC
TCTGCTCTGCCGCCGTTGCCGCCGCTAGTCCGAGTACGAGTACAGAGATGATCC---CGACGCGGCTGCTCTGCTGCTGC
TACTTGCTGTGGTTCATCTTCATCGCCGTCGCCCCGCGCACGATCGATTCCAAGCTGGTGACCACCCTCCCTGGCTTCGA
CGGCCGCCTCCCCTTCCGCCTCCACACTGGGTGG----GTACCTTCGTCTCCATCTCAATCTCCACGAGCTAAAGTCTAT
CTACTTCTTGCATTCTTATAAATCGACATGTCCATGAATGAATTGAATCGCAAGGTACGTGGAGGTGGACCAGGGCACGG
AACTCTTCTACTACTTTGTCGAGTCGGAGGCCGGCGGCGAGGGGGACCCTTTCCTTCTCTGGCTCACCGGCGGCGACCAC
TGCTCCGTCTTCAGCGGGCTCGCCTACGAGATCGGTCTCTCTTTTCATCCAATCAACTACTATTACTGATTGCGGGGCCG
TC-----------TCTCCATCTGCAGCATGATCATATTATCATTCATGTATAGTACAGGTCCCATCAGGTTCGTCCTGGA
GCCCTACAATGGCAGCTTACCACGCCTGCACATCAATCCAAACTCATGGACAAAGGTCTTCCTAGCCAGCTTCTTGTTCC
ATCTGAAGCAGCTCGCTGCCTGTAATGTATATGTACGCATGCTGCTTGCGCTTGCACCCTAATAGTACCAAGGGAATGT-
----GCAGGTGGCACACATCCTGTTCGTCGACTCACCGGTGGGTGCTGGATTTTCCTTTTCCAAGCAACCCAAGGGGTAC
GAGGTCGGGGATGTGTCCTCCTCATTGCAGCTCCATGACTTCCTCATCAAGTGGTTCAGCGACCACCCCAAATACCTGAA
AAATCCTTTCTATATCGGTGGAGATTCCTATGCTGGAAAACTTGTGCCATATATCGTGCACATCATTTCACAAGGTAC--
ATTTATAGTATATACCATGTGCCCTGTTTTGCAAGTCCATCTGCGTAAATCTGTGTGCAAACTAGTA--TGATCAATTGT
TTCAATTCATTATAAGCTCTATCTGAAGTTCTGAACTGTATATGAATTCATGCTCACTAGCTTCCCTCTTCAGGTATTGA
AGCAGGAAATAGTCCCCGCATTAATCTTAAGGTACCATAATGACATAATCATTACTACTTAGTTGTTTTAGCGATAACAG
TAAGTATCATAAATGATTATTATA--------------------------------------------------------
-------------------------------------------------TATGTATGTCTATTGATTTCAGGGATATCTA
GTAGGTAACCCGTCGACTGGTGAAAGCATCGATATAAGCTCTAAAGTGCCATATGCTCACGGAGTTGGTATAATATCAGA
TCAATTATACGAGGTAA-CTAGACTCGAGCCTCCTTGCAGCCATGTATATAGTCCATTCTATCGCGATCAGGGTGGGCAT
TAATACGTTCTTTGTTGATAATATATGTAGACCATATTGGGGCATTGCCAAGGACAGGACTACATGTTTCCAACAAATGA
TTTGTGCGCCCAAGCTCTGGATGATTTCAATCATGTAAGAAGAACAAAGAAACATCTTATGGTAGAATTGATTTGACTGT
TCGCCATGCGA-TTTTGCAGCTTTTGTCCGAAGTTCAGCAGGCCCAAATTTTGTTGGACACCTGCGTTTTTGCGTCCGTT
CCAGCCCGACCAGAAGCTGATAGTGGGACCGAGTACTCGGGTGGCTCTGGTAGGAGGATCCTAGTTGGAAATCCGCCACC
TCGCCCTCCATTTGGATGTATCGTAAGTAGCAATGTCTCCATTCTTCATGCAGTACAATGCAAGTTA-------------
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------------GATAGCCGTCCATCGCTTTTAACAATTTATTACTATATAATACTCCCTCCGTTCCTAAATATTTGTCT
TTCTAGAGATTTCAACAAGTGACTACATACGGAGCAAAATGAGTGAATCTACACTCTAAAATATGTCTATATACATCCAT
ATGTGGTAGTCCATTTGAAATCTCTAAAAAGACAAATATTTAGGAACGGAGGGAGTATAAAACTTTATTACAACTAATGT
ACTAATATATTAGTTGCAATAACA-TCTTATATTATGGGATGAAGCGAGTAGTACTTAGCTAAGGAAAAAGCAACTTAAT
AGTGCCCTATGTAGAACAAACTAACCAATATTGTGGCAGACTTATGGGTAATACTGCCTATTGTATTTTTCCATCGCTTT
TAACAACTTATAAGTACTTAAACGAGAATAAAAGTAGGGAAAGTTGTGGTGAAGCTCAGGCTCCAAAAAAACACTCTCTT
TAAAAGTAACTTATTAGTGCTATATATACCAATATTGTGGCAGACCTATGGGTACTACCTATCGTATTTCTGGGCAAATG
CGGAGGTGGCCCGAAATGCTCTTGGGATCAAGGAGGGGAGCGTGGAGGAGTGGGTGAGGTGCCACAACGGCGATCTGCCC
TACACAATCGACCTCAGGAGCAGCATTGAGTACCACCGGAACGTCACGGCCAATGGTGGCTACCGTGCGCTTGTATACAG
CGGCGACCATGACGCGATGGTGCCGCACCTGGGGACACAGGCGTGGATAAGGTCACTTGGCTTCCCCATCGCCCACCATT
GGAGGGCGTGGCATCTCCATGGCCAGTCTGCTGGGTACCCCCACACGCACATCATTGTTGCTAG----CTA------CTA
CTACTTGCTTCACGCTTACTGCATATTC-------TTGTTGATGCATGTATTTGTTGCAGGTTCACCTTAACTTACTCCA
ACAACATGACATTCGCAACCATTAAGGTAACACTTGCCTTCTTAATC-TGCCTGGATGCACAAGCTGGTGCTGATCAAGT
TCCATTCGGTTGATGCAGGGCGGCGGGCACACCGCGCCGGAGTACGAGCCCGAGAGGTGCTTCGCCATGTTTAGCCGATG
GATACTCGGCGAACCACTCTAGTACTCCTAACAGCAACGACCAAGTAGAGAAGGGGGAAAGC------------------
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>chr3B_10
---------TTTTTAGATG-CTTTTCTGAGTTTGGTTAGGGTTTGTGCCATGCTCAAGAAGATGAGGCGGTGGC----GG
CTTCTTGAAGATGGAATAAGGTCCTCCCCGCCTAGC-CC-CGTCCCGGTGATGTTTCAAGCATCGTCGGAAGGCGTGTGG
AGGTTTGTCTCCGGCGGATCTCATGGGATCCGGTCGGCGTTTGTCTTCGGTGGATCCGACTGGATCCGGTCTTCGCTCGT
CTACGTCTGTGTGTCTGCAGGTTGGATCCTTTCGGTCTATGCTTCTCTTCATCGGCGGCGGTTGCTGTTCTGGTGCGCTG
GTCCCATGGGGCCTTAGCACGACGACTTCCCGACTGTCTACTACAACAATGTTTGCCCGGCTCCGACGAGGGAGGGACGA
TGACGGCGGCGCGCCTTCGGCTCGCTTCAGAGATTGTAGTCATCGCTAGGTGGTCTACAGACATGGATGTAATTTTTACT
TCTAGTGTTTTTTGTACTACCTTGACAGTTGATGAATA------------------------------------------
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>chr2A_10
---------TTTTTAGATG-CTTTTCTGAGTTTTGTTAGGGTTTGTGCCATGCTCAAGAAGATGAGGCGGTGGC----GG
CTTCTTGAAGATGGAATAAGGTCCTCCCCGCCTAGC-CCCCGTCCCGGTGATGTTTCAAGCATCGTCGGAAGGCGTGTGG
AGGTTTGGCTCCGGCGGATCTCATGGGATCCGGTCGGCGTTTGTCTTCGGTGGATCCGACTGGATCCGGTCTTCGCTCGT
CTACGTCTGTGTGTCTGCAGGTTGGATCCTTCCGGTCTATGCTTCTCTTCATCGGCGGCGGTTGCTGTTCTGGTGCGCTG
GTCCCATGGGGCCTTAGCACGACGACTTCCCGACTGTCTACTACAACAATGTTTGCCCGGCTCCGACGAGGGAGGGGCGA
TGATGGCGGCGCGCCTTCGGCTCGCTCCAGAGATTGTAGTCGTCGCTAGGTGGTCTACAGACCTGGATGTAATTTTTACT
TCTAGTGTTTTTTGTACTACCTTGACAGTTGATGAATA------------------------------------------
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>chr7B_10
---------TTTTTAGATG-CTTTTCTGAGTTTTGTTAGGGTTTGTGCCATGCTCAAGAAGATGAGGCGGTGGC----GG
CTTCTTGAAGATGGAATAAGGTCCTCCCCGCCTAGC-CCCCGTCCTGGTGATGTTTCAAGCATCGTCGGAAGGCGTGTGG
AGGTTTGTCTCCGGCGGATCTCATGGGATCCGGTCGGCGTTTGTCTTCGGTGGATCCGACTGGATCCGGTCTTCGCTCGT
CTACGTCTGTGTGTCTGCAGGTTGGATCCTTCCGGTCTATGCTTCTCTTCATCGGCGGCGGTTGCTGTTCTGGTGCGCTG
GTCCCATGGGGCCTTAGCACGACGACTTCCCTACTGTCTACTACAACAATGTTTGCCCGGCTCCGACGAGGGAGGGGCGA
TGACGGCGGCGCGCCTTCGGCTCGCTCCAGAGATTGTAGTCGTCGCTAGGTGGTCTACAGACCTGGATGTAATTTTTACT
TCTAGTGTTTTTTGTACTACCTTGACAGTTGATGAATA------------------------------------------
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>chrUn_10
---------TTTTTAGATG-CTTTTCTGAGTTTTGTTAGGGTTTGTGCCATGCTCAAGAAGATGAGGCGGTGGC----GG
CTTCTTGAAGATGGAATAAGGTCCTCCCCGCCTAGC-CCCCGTCCCGGTGATGTTTCAAGCATCGTCGGAAGGCGTGTGG
AGGTTTGTCTCCAGCGGATCTCATGGGATCCGGTCGGCGTTTGTCTTCGGTGGATCCGACTGGATCCGGTCTTCGCTCGT
CTGCGTCTGTGTGTCTGCAGGTTGGATCCTTCCGGTCTATGCTTCTCTTCATCGGCGGCGGTTGCTGTTCTGGTGCGCTG
GTCCCATGGGGCCTTAGCACGACGACTTCCCGACTATCTACTACAACAATGTTTGCCCGGCTCCGACGAGGGAGGGGCGA
TGACGGCGGCGCGCCTTCGGCTCGCTCCAGAGATTGTAGTCGTCGCTAGGTGGTCTACAGACCTGGATGTAATTTTTACT
TCTAGTGTTTTTTGTACTACCTTGACAGTTGATGAATA------------------------------------------
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>chr3D_750
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------------------------CTGATTGGGATTCACCGAGCTGAGGGAAGCTGAATTTCGGTGATTAGATTCGTTTC
CAAGCGGCGGAAGTCGCCAGTCATCCTTCCGTGACACGTCTGGCTAAGAGGCATGACACGTGTGGTAGATCAAGGTGAGA
CCGGCATAAAATGTCCTCCGCCA------ACAGTTCCGGCAAAAACTATGCCAGCAGCTGATCCGCTGCCCGTGCTCTGC
TCTGCTCTGCTGCCGTTGCCGCCGCTAGTCCGAGTACGAGTACAGAGATGATCC---CGACGCGGCTGCTCTGCTGCTGC
TACTTGCTGTCGTTCATCTTCATCGCCGTCGCCCCGCGCACGACCGATTCCAAGCTGGTGACCAGCCTCCCCGGCTTCGA
CGGCCGCCTCCCCTTCCGCCTCCACACTGGGTGG----GTACCTTCGTCTCCATCTCAAGCTCCACGAGCTAAGGTCTAT
CTACTTCTTGGATTCCTATAAATCGACATGTCCATGAATGAATTGAATCGCAAGGTACGTGGAGGTGGACCCGGGCACGG
AGCTCTTCTACTACTTCGTCGAGTCGGAGGCCGGCGGCGAGGGCAACCCTTTCCTTCTCTGGCTCACCGGCGGCGACCGC
TGCTCCGCCTTCAGCGGCCTCGCCTACGAGATCGGTCTCTCTTTTCATTCAGTTA---ACTATCATTAATTGCGGGGTCG
ATCGCCTCTACAGTCTCCATCTGCAACATGATCAC---ATCATTCATGTATAGTGCAGGTCCCGTCAGGTTCGTCCTGCA
GCCCTACAATGGCAGCTTACCACGCCTGCACATCAACCCAAACTCATGGACAAAGGTCTTCCA----AGCTTCTCGTTCC
ATCTG------------------AATATGTATGTACGCATGCTACTTGC------ACGCTAATACTAAGGTAATGTCCAC
CGGCGCAGGTGGCACACATCTTGTTCGTCGATTCGCCGGTCGGTGCTGGATTTTCCTTTTCCAAGCAACCCAAGGGATAC
GAGGTCGGGGATGTGTCCTCCTCGTTGCAGCTCCATAACTTCCTCATCAAGTGGTTCAGCGACCACCCCACATACCTGAA
AAATCCTTTCTATATCGGTGGAGATTCCTATGCCGGAAAACTTGTGCCATATATCGCACACATCATTTCACAAGGTACAT
ATA-----TATATACCCCGTGCCCTGTTTGGCAACTCCATCTGTGTAAATCTGTGTGCAAACTAGTACATGATCAATTGT
TTCAATTCACTATAAGCTCTATCTGAAGTTCTGAACTGTATATGAATTCATGCTCACTAGCTTCCCTCTTCAGGTATTGA
AGCAGGAAATAGTCCCCACATTAATCTTAAGGTACCACAATGACATAATCATCGCTG----GTTGTTTTAGCGATAACAC
TAAGTATCATAAGTCATTATCATATACTCCCTCCGTTTCAAATTACTCGTCGCTGAAATGGATGTATCTAGAACTAAAAT
ACATCTAGATACATCCATACGTGCGACAAGTAATTCGGAACGGAGGGAGTATGTATGTTTGTTGATTTCAGGGATATCTA
GTAGGCAACCCATCGACTGGTGAAAGCATCGATATAAGCTCTAAAGTGCCATATGCTCACGGAGTTGGTATAATATCAGA
TCAATTATATGAGGTAA-CTAGACTCGAGCCTCCTCGCAGCTATGTATATAGTCCATTTTATCGCAATCAAAGGGGCCAT
TAATATGTTGTTTGCTGATGATATATGTAGACCATATTGGGGCATTGCCAAGGACAGGACTACATGTTTCCGACAAATGA
TTTGTGCGCCCAAGCTCTGGATGATTTCAATCATGTAAGAAGAAGAAAGAAACATCTTATGCTAGAATTGACTTGACCGT
TCGCAATGCAATTTTTGCAGCTTTTGTCCGAAGTTCAGCAGGCCCAAATTTTGTTGGACACCTGCGTTTTTGCGTCCACT
CCAGCCCGGCCAGAAGCTGATAGTGGGACCGAGTACTCGGGTGGTGCTGGTAGGAGGATCCTAGTTGGAAATCCACCACC
TCGCCCTCCATTTGGATGTGTTGTAAGTAGTAATGTCTCCATTCCTCATGTAGTACAATGCGAGTTACTCCCTCCGTTCG
TAATTACTTGTCGCAGAAATGGATGTATCTAGACGTATTTTAGTTTTAGATACATCTTTTTCCGAGACAAGTAATTCTGA
ACGGAGGGAGTAGATAGTT-TTCATCGCTTTTAACAATTTATTGCTCCCTCTGTCACAAAATAACAAAGTTGAGTCACAT
TTTTTGAA------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------ACGGAGGGAGTAGTAATTAGCCAAGAAAAATGCAACTTA--
---------------------TACCCAATATTGTGT-AGACTTATGGG---TACTACCTATCGTATTTTTCCATCACTTT
G-ACAACTTACAAGTAATTACCCGAGAATAAAAGTA--------------------------------------------
--------ACTTACTAGTGCTATGCATACCAATATTGTGGCAGACTTACAAGTACTACCTATCGTATTTCTGGGCAAACG
CGGAGGTGACCCGAAATGCTCTTGGGATCAAGGAGGGGAGCGTGGGGGAGTGGGTGAGGTGCCACAACGCCGATCTGCCC
TACACAATCGACCTCAGGAGCAGCATTGAGTACCACCGGAACGTCACGGCCAATGGTGGCTACCGTGCGCTTGTATACAG
CGGCGACCATGACGCAGTGGTGCCGCACCTGGGGACACAGGCGTGGATCAGGTCACTTGGCTTCCCTGTCGCCCACCATT
GGAGGGCATGGCATCTCCATGGCCAGTCTGCTGGGTACCC--------ACACCATCGTTGCTAG----CTATTATCGCTA
TTTCTTGCTTCATGCTTGCTGTATATCC-------TTGTTGATGCATGTATTTCTTGCAGGTTCACCTTAACTTACTCCA
ACAACATGACATTCGCAACCATCAAGGTAACACTTGCCTTCTTAATC-TGCCTGGATGCACAAGCTGGCTCTAATCAAGT
TCCATTCGGTTGCTGCAGGGTGGCGGGCACACCGCGCCGGAGTACGAGCCCGAGAGGTGCTTCGCCATGTTCAGCCGATG
GATACTCGACAAACAACTCTAGTACTCCTAACAGCCACGATCAAGTAGAGAAGGAGGCAAGCCAGACGATCAG-AGTATT
GGGTACCTCCCCACTCCACTATTCAGTGGTTTCGCCTACATATCAACTATACTGCCTGGCAATATAGTTCGTACTAGAAC
ATATAGGCGCGCGATGCCC--TCCGTCTATATTGGAGAAAAACACTTAATATATTTT----AGAAAATACGGATACTACA
AATATCTTGTTAAGTATGGTACAGATATATGAGACAAAGAAAATTCTAAGAAGATACAATAAATCTGCATTTTGGTGCAG
CAGACA--GATTTTACAAATGCAGGGTTCAGAGGGATCACACCGATGCTATTGCTATGTGTTAGGATTTAATTAATCCTA
TTAATCCATGCTTAAGGAATAGATCGCGGTTGCCATATGGAAACCGACGTTTTCCTAGCGCCTTCTGGAACAGACACCTT
TTCACTTGGTGTCTTTTGTAACTCTATATATAGATGTATTCATCATCAATAAAGATTACCCCGATTCATTTGTTCGACTC
TCTTGTTCGTTTACAATCGATCCTTCACACTATGTACAAATTGTCGTCATGTTTACATACGCTACTGTTCAGAACTAAAG
ATACAGTGATCTCACATTAAATTAACACATGGCTATGGCTGTTGCTTTTCCAATTTCAATTAAATTGACATATGGTTATG
GCCATTGCTTTTCCAATTTCAGTGCCGCCTCCTTGCACGCCATATTTAAATTGACACACGCGACCTTAGGTCGCATTAAC
GAGGCCCCACGGCTTTCTTATTCAGATGAAAGAGCATTTTGTGTGTCAATTCCCTAAG----------------------
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>SNPs
-------S--------------S----------------S--------------------S--------S---S------
----------------------------SS-SS-----------------------------------------------
--------SS-------------------------S------------------------------------------S-
----------S-S---------S-S----------------S--------S--------S----S------------S--
S---------------------S---------------------S-------------------S---------------
--------S---------------------------------------S--------S----------S-------S---
-S------------------------------------SSS-SSSSS-S-S-SSSSSSSSS-S----SSSSSSS--SSSS
--SSS-SSSSS--SSSSSS-S--S-SSSSS---SSSSS--SSS-SSS-S-SSS--SSS--SSSSSSSSSS--S---SSSS
-SSS-SSSS-SSSS-SS---SS-S--SSSSSS--SSS-S-SSSSS--SSSSS-SSSS-S---------------------
--------------------------------------------------------SS-SSS-S-S--------------
-----SSSSS-----------S----------S------------S----------------------S-----------
-------------------------------------------S------------------------------------
----------------SS-S---SSS------------------------------------------------------
----------------------------------------S--S----------SSS--------------S--------
--------------------------------------SS----------------------------------------
---------------------------------SSSSS-----S--S--S---------------S----S---SSSSS-
SSSSSSS--------------S----------------------------------------------------------
---------------------------------------------SS---------------------------------
---------------------------------------------S-------------SS---S----S---S------
------------------S-------------------------------------------------------------
---------------------------------------------------------------------------S----
------------------------------S-----------------------------S-S-----------------
-----------------------------------------------------------S--------------------
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------------------SS--------------------------S-----------------------S-----S---
------------------------S-------------S-----------------------------------------
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---S--S----------S--------------SS-SS--------------S-----------------S----------
------S----------------------------------S--------------------------S-----------
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-----------S----------------------------------S------S--------------------------
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-------------------------------------------------------S--S---------------------
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--------------------------------------------------------------------S-S---SSS-S-
SSS-S---SS----SS---S---SS---------S---------------------------------------------
-----------------------S------------------------------------S-------------------
-----------------S--------------------------------------------------------------
--------------S-----------------------------------------------------------------
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----------------S----------------------------------------------------S--S-------
-------------------------------------------------------------SSSSSSS------------
------S---------S-------SS-SSSSSSSS----S----------------------------------------
--------------S----------------------S-----SS-SS---------S-----S----------------
--S-----------------------------------------------------------------------------
--------------------------------------S------------------------SS-----SSSS------
---------S-----------S---S-----------------S-----------------S-S----------------
---------SSS------SSS----------------------------S-------SSSS-------------------
---------------------S---------S-----S----------S-------------------------------
------SS---------------S-----S------------S-------------------------------------
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-------------------------------------------------------------------S------------
----------------------------------------------------------------S---------S-----
------------------------------------------S--------SS-----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_833
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-------------GAGGCGTGTCACTGATTGGA-----------------------------------------------
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>reverse_2602
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-----------------------------------------CCATTGCCAAGGACAGGACT-------------------
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>forward_1096
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------------------------------------CGAGCACTGAGATGATCCCG------------------------
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>reverse_2767
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----------------------------------------------GATTTTGCTGGACACCTGCG--------------
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>forward_2732
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------------------------------------------------------------------------TTGACCGT
TCGCAATGCAAC--------------------------------------------------------------------
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>reverse_5027
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------------------------------------------------------------------TTGAGGTCCTGAGC
TGGTCT--------------------------------------------------------------------------
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----------------------------------------
