>input_sequence_30543
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----------------------------------------------------ATGCAGAAGTCGCGGAGAGACCTCATGA
AGAGGAAGGCGGCGGCCAAGGCGCACGAGCAGGGCGCGGGCGCGGCCGCCGGGATGAGGCGGCGGCGGCTGTACGGCTTC
TCCGCCTCGCTCGTCGTCGCGTCCTGGGCCGCGCTCCTCATCCTCAACTCGCTCGTCGGCCACGGCGACGGTCAACGCGG
TACGCATGGTCCGGGCCTTCTTCTCTCCTCCGTC---CCTGAAACTCTGAAGTTCCGCTCGCCT--TGATGATGAATGAA
TCCTGTGCCGTGCTGCGCGGTGGTTGCGTGGTGCGGCGATCGGTAGGTGTTTGGTGGATTGTCCGTGGCTGTCGGTGGTG
CCGTGCAGGCGCGATCGAACCCCCGTTAGGCTTAGATCCGTAATAATCCGTATGCGGTTGTTGCGCTCTCTCTGATCACC
GAACAGGTTGCTGGTTGT-TAGATGCGTTGCCGAAATTTCCACGTTTGTGTTCTGTGTCCGAGATTTACTGAACGCTCCT
GTCATCAGTTTTTAAATAAACTTGGTTCCGTGTTGACTGAGATCACATTTTCTTCGTCTGATTTCTGCAGATGGTGGAGA
CCCGATTGTTGCCATTCCCATTGCTGGGCCTGGGCCTACAATGAATGAAGGTTCTGTTGGTCCTGATGTTGTACACCAGG
AGCACGAGGAGAATTTGGCGGTGTCTGGTGACACATGTGTTAAACTTGATGAAAGTGTCTTGCTTTCAGAAGAGACAGTT
CTGCAGGAAGATGAAGTGTGTTCCAAGGATGATGCTGGAAGTGATGACATGGAAGCTGTAACCAAGGATGATCAAATTGA
TCTGTCAGAAGGCCAGGGCGAAGAACAAACTGTAACCAAGGATGGTAAAATTGACCTGTCAGAAGGTCAGGGTGAGGAAG
GTGCTCTGACCAAGGATGATCAAATTGACCTGTCAGTAGGTCAGGGTGCGGAAGAAGCTCAAACAAATGATGATCAAATT
GAGCAGTCAGGAGGTCAGGGTGAGAGTCCTCATCTGACAAACATCGCCTCTGTAGTTCATCCAGCGGAGAAGGTGGATGT
TGAAGATGTTCCCAAACCAGCAAGGTTGGCACGAGTTGTTCCTCCGGGTCTTGATGAATTTAAGACGAGAGCAATTGCTG
AAAGGGGAAAGGATGCCTCTAGTCAAACTGGCCATGTGATTCACCGAAGGGAACCTAGTGGTCAGTTGTACAATTATGCT
TCGGCAGCTAAAGGGGCAAAGGTTCTGGATTATAACAAGGAGGCCAAAGGCGCTTCCAACATTCTAGACAAAGATAAGGA
TAAGTATCTCCGCAATCCTTGTTCCGTGGAGGGAAAATATGTCATCATAGAGCTTTCTGAAGAAACCTTGGTAGATACCA
TTGCAATTGCAAATTTTGAGCATTACTCTTCTAATTTAAAAGAATTTGAAATGCTGAGCAGTCTTATTTATCCCACAGAA
AACTGGGAAACACTTGGGAGATTCACTGTCGCAAATGCGAAGCATGCTCAGAGTTTCACATTTCCCGAGCCAAAGTGGGC
GAGGTACTTGAAGTTCAATTTGCTAAGCCATTATGGTTCTGCAAGCTATTGTACACTGAGTATGCTTGAGGTGTACGGAA
TGGATGCTGTGGAAAAGATGCTCAAGAACTTGATTCCAGTTGAGAATAGAAATGCTGAATCTGATGACAAATCGAAGGAG
CCAATTGAGCAACCACCTTTGAAGGAGCCTAGTGGTGGAAAAGACTCCTCACAGGAACCCCTTGATGAAGATGAATTTGA
GGTAGAAGATGATAAGCCAAATGGAGATTCATCAAGGAATGGTGTTCATGATCAGATTGTAGAGACAAGGACACTTCAGG
CTGGCAGAATTCCTGGAGATACAGTTCTCAAGATACTGATGCAGAAAGTCCAGTCTCTTGATGTGAGCTTTTCTGTATTG
GAGCGGTACCTAGAGGAACTCAACAGCAGATATGGACAAATTTTTAAGGATTTCGATTCTGATATTGATAGCAAAGATGC
GCTCTTGGAGAAGATAAAATTGGAGTTGAAGGAGCTTCAGAGCAGCAAAAATGACTTTGTATGCAACTTTCTGCACTTGT
GTTTTGTTTCTGCTATTGTTACCCTTAATTTCTGTACCTTATCTTATTAT--GCATTTCCTGTTTTCAGGCGAGAGATAT
TGAAAGTATCCTTTCATGGAAGTCAGTTGCCTCCTCGCAGTTAGACCAACTTGTCCTGGATAATGTCATACTCAGGTTTG
TATTGTTATTCTTTAGTTTCATGGATTTGCATGCACATTAAGAAAGCATGATATTGCTTGATACGATTCTAACCTTGTGA
---ATCATGCTGTTGTGTGCAGATCTGAGTATGAGCGATTTAGGGATAAGCAGGTTGACCTGGAGAATAGGAGCTTTGTT
GTTATATTCCTGTGTTTTATTTTTGGATGCCTAGCCATAGCTAAATTGTCCATAGGTATGATATTCAATATTTGTAGATT
ATATGATTGTGAAAAGTTGGATAGGGTAAAATCCGGATGGCTTGTGCTGCTGCTGAGCAGCTGCATTGTGGCCTCCATTT
TGGTAATACAGTGA------------------------------------------------------------------
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>chr3A_1_TraesCS3A01G389900
TGCTCCTTTCAGGGTGGTCGGCATGGAAATAGTACAAGTGTCGCAATGGACAATGAAAGACATTATCATTTAGGCCTGAC
ACTAAGCCCTCGGATGATTAGGTACTTTCCGGTGAAACCAGCTCACAAGAATGCAAGTTCT------------CATTGAT
GTATATATTTTTTAAAATTTATTT-CAGACTTTTAA-----------------------------CGATGTTTGTTCAGT
ATGGTCGGCATGAAAAAAAAGGACAGTACTTGCTAATAATAATCCTATA----GGGTGGTCGACATGAAAC---------
TGTTGCAATGGACACTACAAATCATTATCATCG-----------------------------------------------
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---------------------------ACCCGTAAAATTTGGCCGTTTCCCCACATTTCCCGCATGGAAGCATGGCT---
--TTCTACCCCGTGATTTCTCCCTGATTTAGGAATTTCGCAGTTTGAAACCGAAGCTTTTGAGTTCTGACGGTGACAACG
GC-----AGGCAGCGGGGT---------TTCTGCCGTTCCACGTCGCAAGGGAACAAAAGGGCCACCTCATCGCGAGGCG
AACAGGCTGGACGTGTCGACGCGGCATGAATCGCCGTGCCAAACGCTGTAAGCCGACAAGGAGATCTCGCGATACAAAAC
CCAGGGGCGCCTCCCTGGCCTCCACCTCCTCCTCCTCCCCCTCCCCCC-------------TCTCCACCTGCCTTCCATC
CCTCCCCCCGATGGAGCTCCGGCCGTTTCAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCGCC-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------CTCGCTTCCCCGCGCCGG
ACCAAGGG----------TGCCGCGGGGCGCGCAGATGCGAGGCGGGGAGAAATGCAGAAGTCGCGGAGAGACCTCATGA
AGAGGAAGGCGGCGGCCAAGGCGCACGAGCAGGGCGCGGGCGCGGCCGCCGGGATGAGGCGGCGGCGGCTGTACGGCTTC
TCCGCCTCGCTCGTCGTCGCGTCCTGGGCCGCGCTCCTCATCCTCAACTCGCTCGTCGGCCACGGCGACGGTCAACGCGG
TACGCATGGTCCGGGCCTTCTTCTCTCCTCCGTC---CCTGAAACTCTGAAGTTCCGCTCGCCT--TGATGATGAATGAA
TCCTGTGCCGTGCTGCGCGGTGGTTGCGTGGTGCGGCGATCGGTAGGTGTTTGGTGGATTGTCCGTGGCTGTCGGTGGTG
CCGTGCAGGCGCGATCGAACCCCCGTTAGGCTTAGATCCGTAATAATCCGTATGCGGTTGTTGCGCTCTCTCTGATCACC
GAACAGGTTGCTGGTTGT-TAGATGCGTTGCCGAAATTTCCACGTTTGTGTTCTGTGTCCGAGATTTACTGAACGCTCCT
GTCATCAGTTTTTAAATAAACTTGGTTCCGTGTTGACTGAGATCACATTTTCTTCGTCTGATTTCTGCAGATGGTGGAGA
CCCGATTGTTGCCATTCCCATTGCTGGGCCTGGGCCTACAATGAATGAAGGTTCTGTTGGTCCTGATGTTGTACACCAGG
AGCACGAGGAGAATTTGGCGGTGTCTGGTGACACATGTGTTAAACTTGATGAAAGTGTCTTGCTTTCAGAAGAGACAGTT
CTGCAGGAAGATGAAGTGTGTTCCAAGGATGATGCTGGAAGTGATGACATGGAAGCTGTAACCAAGGATGATCAAATTGA
TCTGTCAGAAGGCCAGGGCGAAGAACAAACTGTAACCAAGGATGGTAAAATTGACCTGTCAGAAGGTCAGGGTGAGGAAG
GTGCTCTGACCAAGGATGATCAAATTGACCTGTCAGTAGGTCAGGGTGCGGAAGAAGCTCAAACAAATGATGATCAAATT
GAGCAGTCAGGAGGTCAGGGTGAGAGTCCTCATCTGACAAACATCGCCTCTGTAGTTCATCCAGCGGAGAAGGTGGATGT
TGAAGATGTTCCCAAACCAGCAAGGTTGGCACGAGTTGTTCCTCCGGGTCTTGATGAATTTAAGACGAGAGCAATTGCTG
AAAGGGGAAAGGATGCCTCTAGTCAAACTGGCCATGTGATTCACCGAAGGGAACCTAGTGGTCAGTTGTACAATTATGCT
TCGGCAGCTAAAGGGGCAAAGGTTCTGGATTATAACAAGGAGGCCAAAGGCGCTTCCAACATTCTAGACAAAGATAAGGA
TAAGTATCTCCGCAATCCTTGTTCCGTGGAGGGAAAATATGTCATCATAGAGCTTTCTGAAGAAACCTTGGTAGATACCA
TTGCAATTGCAAATTTTGAGCATTACTCTTCTAATTTAAAAGAATTTGAAATGCTGAGCAGTCTTATTTATCCCACAGAA
AACTGGGAAACACTTGGGAGATTCACTGTCGCAAATGCGAAGCATGCTCAGAGTTTCACATTTCCCGAGCCAAAGTGGGC
GAGGTACTTGAAGTTCAATTTGCTAAGCCATTATGGTTCTGCAAGCTATTGTACACTGAGTATGCTTGAGGTGTACGGAA
TGGATGCTGTGGAAAAGATGCTCAAGAACTTGATTCCAGTTGAGAATAGAAATGCTGAATCTGATGACAAATCGAAGGAG
CCAATTGAGCAACCACCTTTGAAGGAGCCTAGTGGTGGAAAAGACTCCTCACAGGAACCCCTTGATGAAGATGAATTTGA
GGTAGAAGATGATAAGCCAAATGGAGATTCATCAAGGAATGGTGTTCATGATCAGATTGTAGAGACAAGGACACTTCAGG
CTGGCAGAATTCCTGGAGATACAGTTCTCAAGATACTGATGCAGAAAGTCCAGTCTCTTGATGTGAGCTTTTCTGTATTG
GAGCGGTACCTAGAGGAACTCAACAGCAGATATGGACAAATTTTTAAGGATTTCGATTCTGATATTGATAGCAAAGATGC
GCTCTTGGAGAAGATAAAATTGGAGTTGAAGGAGCTTCAGAGCAGCAAAAATGACTTTGTATGCAACTTTCTGCACTTGT
GTTTTGTTTCTGCTATTGTTACCCTTAATTTCTGTACCTTATCTTATTAT--GCATTTCCTGTTTTCAGGCGAGAGATAT
TGAAAGTATCCTTTCATGGAAGTCAGTTGCCTCCTCGCAGTTAGACCAACTTGTCCTGGATAATGTCATACTCAGGTTTG
TATTGTTATTCTTTAGTTTCATGGATTTGCATGCACATTAAGAAAGCATGATATTGCTTGATACGATTCTAACCTTGTGA
---ATCATGCTGTTGTGTGCAGATCTGAGTATGAGCGATTTAGGGATAAGCAGGTTGACCTGGAGAATAGGAGCTTTGTT
GTTATATTCCTGTGTTTTATTTTTGGATGCCTAGCCATAGCTAAATTGTCCATAGGTATGATATTCAATATTTGTAGATT
ATATGATTGTGAAAAGTTGGATAGGGTAAAATCCGGATGGCTTGTGCTGCTGCTGAGCAGCTGCATTGTGGCCTCCATTT
TGGTAATACAGTGATGTGTGTACTCATCTCCATATAATCGCGGCTGCATAATGTAATTCCATGAGGTATCTGATTCAAAA
AAGATCACATCTCTGAGATCATAGAA-AATAAAATCTCAGTACAGATTATCTAGCCTCATCATTGATCTAAAATTTGGAG
GGAAAAGGAAAGGAGCAAAGTGTGCACCTGTGAAACTGGAGTCATTTTAAAGGTGCAG-CAGACTAGAAGTAGTAAAGTC
TAGAACTAGATTATCTCTGCTCTGGTCCATGCCTCCATGGTCCACTCCAGTGGAATGTAGAAGCAAGACTACCTGGAAAC
CATGTGCACCCAGCTGGAGCCGGCAATCATGGAAGGTTAACCG-------TGGCATGGTCCCATGTGCTTCCTTGTATGA
TTGCCA-------GGGAGAGAAATGTACTGAATATAGCATTTCCCTATGTCTCGCCATGAATCCTGTGCAGTGGGTGTTC
TTTATTTTTGGGTGGGCGTCCTGTCCAGCGGTGGTGCACGTGGCCTCCACATTGTGTTGCTTACAAGGCAG---------
-----TTGTCCATTTGTTTCCACTTTCCACAATGGAAGGCACCATTGGTACTC-TAACTTCTATTGGTAGTTTCAAAACT
CAAGTCAATGGCTCATCAAAGGTATATGCTCCCTGCACAGCCACATATGT---ACAGCTGTTCTTAGCAGTTGAGAGAGT
ATT-T-TTTTGCAAGTTTTTCTATTGCTTCCATGTCCAGCTTCTCGGTTGGAATTTCTGTGTATTTCTG----------T
TTGAACAAGCTATTCATGATAGTTGACATTTTATTTCATGGATAGATTCATAGAAGGATGGCATTGAAAAATACTTTTGT
CTGCGACATCTGGTTAGCTAGGCAATGACAGCTCGTA-------------------------------------------
--------------GTTTTTTGCTGGATGGATATCCACAGTTTCACGCGGCATTCTCCTATGTCAGCTTCTTCATTACTT
TGATCATTTCTACTCCCTCCGTTCCAAATTACTCGTCGCAGAAATGAATGTATCTGGAACTAAAATACATCTAGATA
>chr3D_3
--CTCCTTTCAGGGTGGTCGGCATGGAAATAGTACAAGTGTCGCAATGGACAATGAAAAACATTATCATTTAAGCATGA-
-----------------TTAGGTACTTTGTAGTGAAATCAACCCGTCAGGATTCAAATTCTA----GACTTGATATTGGT
GTACATATTTTTCCGTATTTATTT-TAGACTTTCGGCGATTTTCGTTTTTTTTTTTTTTGAATTGCGATTTTCGTTTGGC
ATGGTCGACATGAA-------GATAGTACTCGCTAATAATACTCCT-----------GGTCGACATGGAAATAGTACAAG
TGTGGCAATGGACACGGCAAATCATTATCATTG-----------------------------------------------
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---------------------------ACCCGC-AAATTTGGCCGTTTCCCCACATTTCCCGCATCGAGGCCTGGC-TTC
CATTCTACCCCGTGATTTCTCCCTGATTTTGGAACTTCGCAGTTTGAAACCGAACCTTTGGAGTTTTGACAGTGACAACG
GC-----AGGCAGCGGGGTTTCCGGGCCTTCTGCCGTTCCACGTCGCAAGGGAACAAAAGG-CCACCTCATCAGGAGCGG
GACAGGCTGGACAGGTCGACTCGGCATGAATCGCCGTGCCAAACGCTGTAAGCCGACAAG-AGATCTCGCGATACAAAAC
CCAGGTGCGCTTCCCTGGCCT------------CCACCTCCTCCTCCC-------------CCTCCACCTGCCTTCCATC
CCT-CCCCCGATGGAGCTCCGGCCGTTTCAAAAGGCAGCCCCCACCCTCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCGGCCCGCGGCCGCGGTTCTGAGCGCGCGCGCGCCCCTCTCCCCTCCCCTCCCCCC
CGGCTCGGATTC-----------------------------------CGTTCGGTGCCCTCGCTCGCCGCGCCGCGCCGG
ACCAAGGGCGCTGCCTGGTGC---------CGCAGATGCGAGGCGGGGAGAAATGCAGAAGTCGCGGAGAGACCTCATGA
AGAGGAAGGCGGCGGCCAAGGCGCACGAGCAGAGCGCGGGCGCGGCCGCCGGGATGAGGCGGCGGCGGCTGTACGGCTTC
TCCGCCTCGCTCGTCGTCGCGTCCTGGGCCGCGCTCCTCATCCTCAACTCGCTCGTCGGCCACGGCGACGGTCAACGCGG
TACGCACGGTCCGGGCCTTCCTTCGTATCTCTTCCGTCCTGGA-CTCTGAAGTTTCGCCTCGATGATGATGATGAATGAA
TCCTGTGCCGTGCTGCGCGGTGGTTGCGTGGTGCGGCGATCGGTAGATGTTTGGTGGATTGTCCGTGGTTGTCTGTGGCG
CCGCGCAGGCGCGATCGAACCCCCGTTAGGCTTAGATCCG---TAATCCGTATGCGGTTGTTGCGCTCTCTCTTGATC--
--ACAGGTTGCTGGCTGTGTAGATGCGTTGCCGAAATTTCCACGTT-GTGTTCTGTGTCCTAGATTTACTGAACGCCCCT
GTCATCAGTTTTTAAATAAGTTTGGTTCCGTGTTGACTGGGATCACATTTTCTTCGTCTGATTTCTGCAGATGGTGGAGA
CCCGATTGTTGCCATTCCCATTGCTGGGCCTGGGCCTACAATGAATGAAGGTTCTGTTAGTCCTGATGTTGTACACCAGG
AGCATGAGGAGAATTTGGCGGTGTCTGGTGACACATGTGTTAAACTTGATGAAAGTGTCTTGCTTTCAGAAGAGACAGTG
CTGCAGGAAGATGAAGTGTGTTCCAAGGATGATGCTGGAAGTGATGACATGGAAGCTGTAACCAAGGATGATCAAATTGA
TCTGTCAGAAGGTCAGGCCGAAGAACAAACTGTAACCAAGGATGATCAAATTCACCTGTCAGAAGGTCAGGGTCAGGAAG
GTGCTCTGACCAAGGATGATCAAATTGACCTGTCAGTAGGTCAGGGTGCGGAAGAAGCTCAAACAAATGATGATCAAATT
GAGCAGTCAGGAGGTCAGGGTGAGAGTCCTCATCTGACAAACATTGATTCTGTACCTCACCCAGTGGAGAAGGTGGATGC
TGAAGATGTTCCCAAACCAGCAAGATTGGCACGGGTTGTCCCTCCTGGTCTCGATGAATTCAAGACGAGAGCAATTGCTG
AAAGGGGAAAGGATGCCTCTAGTCAAACTGGCCATGTGATCCACCGAAGGGAACCTAGTGGTCAGTTGTACAATTATGCT
TCGGCCGCTAAAGGGGCAAAGGTTCTGGATTTTAACAAGGAGGCCAAAGGCGCTTCCAATATTCTAGACAAAGATAAGGA
TAAGTATCTCCGCAATCCTTGCTCCGTGGAGGGGAAATATGTCATCATAGAGCTTTCTGAAGAAACCTTGGTAGATACCA
TTGCAATTGCAAATTTTGAGCATTACTCTTCTAATTTAAAAGAGTTTGAAATGCTGAGCAGTCTTATTTATCCCACAGAA
AACTGGGAAACACTTGGGAGATTCACTGTCGCAAATGCGAAGCATGCTCAGAATTTCACATTTCCCGAGCCAAAGTGGGC
GAGGTATTTGAAGTTCAATTTGCTAAGCCATTATGGTTCTGCAAGCTATTGTACACTGAGCATGCTTGAGGTGTATGGAA
TGGATGCTGTGGAAAAGATGCTCGAGAACTTGATTCCAGTTGAGAGTAAAAATGCTGAATCTGATGACAAATCGAAGGAG
CCGATTGAGCAACCACCTTTGAAGGAGCCTAGTGGTGGAAAAGACTCCTCACAGGAACCCCTTGATGAAGATGAATTTGA
GGTAGAAGATGATAAGCCAAATGGAGATTCATCAAGGAATGGTGTTCATGATCAGATTGTAGAGACAAGGACACTTCAGG
CTGGCAGAATTCCTGGAGATACAGTTCTTAAGATACTGATGCAGAAAGTTCAGTCTCTTGATGTGAGCTTTTCTGTATTG
GAGCGGTACCTAGAGGAACTCAACAGCAGATATGGACAAATTTTTAAGGATTTCGATTCTGATATTGATAGCAAAGATGC
ACTCTTGGAGAAGATAAAATTGGAGTTGAAGGAGCTTCAGAGCAGCAAAAATGACTTTGTATGCAACTTTCTGCACTTGT
ATTTTGTTTCTGCTATTGTTACCCTTAATTTCTGTATCTTATCTTATTATATGCGTTTCATGTTTTCAGGCGAGAGATAT
TGAAAGTATCCTTTCATGGAAGTCAGTTGCCTCCTCACAGTTAGACCAACTTGTCCTGGATAATGTTATACTCAGGTTTG
TATTGTTATTCTTTAGTTTCATGGATTTGCATGCGCATTAAGAAAGCATGATATTGCTAGATACGATTCTAACTTTGTGA
ATCATCATGCTGTTGTGTGCAGATCTGAGTATGAGCGATTTCGGGATAAGCAGGTTGACCTGGAGAATAGGAGCTTTGTT
GTTATATTCCTGTGTTTTATTTTTGGATGCTTAGCCATAGCTAAATTGTCCATAGGTATGATATTCAATATTTGTAGATT
ATATGATTGTGAAAAGTTGGATAGGGTAAAATCCGGATGGCTTGTGCTGCTGCTGAGCAGCTGCATTGTGGCCTCCATTT
TGGTAATACAGTGATGTGTGTACTCATCTCCATATAATCGCGGCTGCATATTGTAATTCCATGAGGTATCTAATTCAAAA
AAGATCACATCTCTGAGATATTACAAGAATAAAATCTCAGTACAGATTATCTAGCCTCATCATTGGTCTCAAATTTGGTG
GGAAAAGGGAAGGAACAAAGTGTGCACCTGTGAAACTGAAGTCATTTTAAAGGTGCAG-CAGACTAGAAGTAGTAAAGTC
TAGAAGTAGATTATCTCTGCTCTGGTCCATGCCGCCATGGTCCACTCCAGTGGAATGTAGAAGCAAGACTACCTGGAAAC
CATGTGCACCCAGCTGGAGCCGGCAATCATAGAAGGAGCCATGGCAGGACTGGCATGGTCCCATGTGCTTCCTTGTATGA
TTGCCACTTGCCAGGGAGAGAAATGTACTGAATATAGCATTTCCCTATGTCTCGCCATGAATCCTGTGCAGTGGATGTTC
TTTATTTTTGGGTGGGCGCCCCGTCCACC---GGTGCACATGGCCTCCACATTGTGTTGCTTACAAGGCAG---------
-----TTTTTCATTTGTTTCCACTTTCCACAATGGAAGGCGTCATTTCATCAG-TAACTTCCATTGATAGTTTCAAAA-T
GAAGTCAATGGCTCATCAAAGGTATATGCTCCCTGCACAGCCACATATGTAGCACAGCTGTTCCTAGCAGTTGAGAGAAT
TTTCT-TTTTGCAAGTTTGTCTATTGCTTCCATGCCCAGCTTCTCAGTTGGA----------ATTTCTG----------T
TTGAACAAGCTATTCGTGATAGTTGACATTTTATTTCATGGATAGATTCATAGAAGGACGGCATTGAAAAATACTTTTGT
CCGCGACATCTGGTTAGCTAGCTAATGGCAGCTCGT--------------------------------------------
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-----------------------------------------------------------------------------
>chr3B_9
--------TCAGGGTGGTCGGCATGGAAATAGTACAAGTATCGCAATGGACAATGAAAAACATTATCATTTAGGCTTGAC
ACCGAACCGTCAGATGGTTAGGTACTTTGTGATGAAACCAACTCACCAGGCTTCAAGTTATAGATGGACTTAACATTGGT
GTGTATATTTTTCTAAATTTTTTTTCAGACTTTTGA-----------------------------TGATGTTGGTTCAGC
ATGGCCGACATGAA-------AAAAATGCTTGCTAATAATAGTCCTATATATAGGGTGGTCGACATGGAAC---------
TGTTGCAATGGACACTACAAATCATTATCATTTGTTAGGAATTAATTAATAGGTTAATTAATTGTTAATCTATGCTAATG
TCGGTGGCCATGTTTGGCAACCGTCTCCTTTGTAACCGCCTTGTAACGAGGGTATAAATACCCCAATGTTCAATCAATGA
AAGAACTGTTCCATCATTTGCTCCTCTCTCTCGTTTCTCTCTAAACACGTTATCACGCACGCCTCTTCCAGAGAGCAATT
AGGCCAAGAACTCGACGGCACCACCGTCCCTGACCATCGGCCTGATACACGGCTGTGGCGGCGACTCCCTCCGGCCCCAA
GGACACAAGGACCCTCGGCCTCGACAGCGCTCCAGCGGCGCAGCACCAGCGCGCGATGCAGGCGGCTGAGGCACCCCATG
GTTGACGACGCCCTCCTCTGTAGGCGCGTCGAAGCGGCGCCCTCCGGCGCTTCAATCCGCCACATGACTGCCGACGACAG
CGACGGCAAACGGCAAGGCCTCTCTATGGCCAGAGGAGGCCACTCCGGCGATCTGCAATTGCCGCAGACGATGACTGGAC
AAGTCTGGAGAAGTTGGCTACTAGAGTTTCGGCCACCACGCGATTCACGGCGGAGACGAGATGTTCCTCGTACAAAAAGG
AAAGAAACTAATCAGGAGATTGATTGATTGATCTTGTCTTCTTGCAATCATCAATTAATAATCTAACAATGAATTGTTTT
TCTCCTGTATGTATATGCGCTCACACGAATCTCACGAAGAATTGATCAATCGTGAACTACAAAGAAAGAAGAACCGATGG
AAGAACGCAGCGCCAGCCTCCATCGATTCAACAATTGGAAGCCTCGAACACACTCTGCCAAAGGACAGAAAATCAATCAA
TTGAGCGGATTTATCATACTCCAAGCAGGAACATCAGAACTTGAAATTGGGCACAATTTTCAATTACACAAGGAAGACGC
ACAGAAAAGGATATGGGCGTTGGCATCCAGGATCACTCGATCGAAAATCCATACCAATAACTGTAAGCATCCATGTGATT
TCTTCAATTTGTGATGTTCTTGCCTCTTAAATGAGATCGGCCGCGGATTCCGGACGGAGGAAGGTCTAAGCGGCGGCCGC
TCGTCCACTCTCCTCCTCCCTTTTCCCCCTGGATGCGGATGGTTGAGGCTGCACCCGCGGCCTCCATCGGCACGGCCGTC
TACAGCGGCGACGACCACATCCCGGCAGCAACGCTCCTCCCTCCGGAGGAGCACCACGGCCCGCCACGCAGCCCGGCAAC
AGAGACGGCCAACGCGCATGCGGAGCGCAGTTCTCTCCGCCACACCTTGGCACGGCGGCGGCCTTCGGCTCCGACGCCGC
TTCTCCTGATGCGGCGCGATGGCGCGGCGGCCGGCGGTGGTGGCGGCCAACATCCGTCCCACGGCGTGGAGATGCTGCCC
AGGCGCAGACGACCTTCGATTGGCGACGCCATCTTACCTCCTAATTCCTCACGAGGAGATGTGCTATGACTCTGTACAGC
CAAAGCTAACTCAATCGATGGATTCTTGGCCGTAGCGAGAATCACCGGAGAACCTTATCTCTTCGGCCATTTAACAATTT
GCATTTTTTTTTCTATTGCCAAATAAGGACATCAGCTTTAGTACTACTTGCATAGAAGCCCTCAGGCTAATTGTGATCGT
ATCACTCAGACCCTCTGGTCTTGTCATATTGTGCATCATATTTTAAAAAATGAATTCCACATGTATTATGAGCATAGTAG
TATTGTTCAAGTGTTCATACCTTGAATTTCCATTATATATTAGAGACGACATTGTGCCATATTATACATGTTTGCCTCAA
CATTCATTGTAAATATTAATTTTAGAACAACATTTTTCTGTCTTTTGCAATTGGAATTAATTTTTCTTGCAAATCTTGAC
AAAATCCAAAATAAGGATTTTGAAGTGTCATACTTAATATGACCACATCATATTTTATTTGTGAATCACAAGGTATTGAT
GGCATCTACTGCATAATTTGCAGATTATCTATCACTACTGTGAGGTCTACATCTTGTTATTTTGATAAGATGACTACCTT
CAAGTGCTCTTCCAAATATTAATGTGACTATTCCAAATTTAATTTGTGAATCACAAGGTATTGGTGGTATCTACTGCACC
ATTTGCAGATTATCAACCACTATTGTGAGGTCTACATCTTGTCATTTTAACAAGATTATTACCTTCAAAGTGTTGTTCCA
AATATTAATATTATATGTGACTACCTCAAGATATCATAAGGTAATACTGGCATCTACTGCAAATTTTGCAGACTATCCAT
TATTACTGCAAGGTCTACATCATGTCACTTTGACAGATGATTACCTTCAAAGTGATTTCACACATTTTACATAACATAAG
GTAATAGAATTATGAACATCTACTGACAAAAGTCAGACTATGTTTCCTATTACTGCGAGATCTACACCGCATCCAATGAT
TATCTTCAAAGTGTTATCCTATATAAATTGAGGTCTACACATATGAGTGTATAGCATCAGCTATCATAAAATTTGCTCCT
CTGAAGCAATTATTGTTGTTCACTAAAATTATTTACTCTCCTAATAAAAAAAATTATATTGATCTTACATGATTAAAATG
GCATTTTTTTTCTTCTAGTACCAATTATTTAAGCATCATTTTGCTTGAATAAGTCGTGGAAAATTACACAAATATTACTT
TTTGTGATGATATTGTCGTCCATACATAAAGGTGGAGACCATAATTTATAGCAAAGATCGAGTGTCTCAAACACTATTGC
AAGATCTACATCACATTTTTGGTTGGTATTTTATACTGACTAATCCCATGTTCAAAAAAATGTCATGGCTATTCTCTTGA
TAGCTAAATATGTACATATTTCATTTTACCCGC-AAATTTGGCCGCTTCCCCACATTTCCCGCATTGAAGCTTGGCTTTC
TATTCTACCCCGTGATTTCTCCCTGATTTAGGAACTTCACAGTTTGAAACCGAACCCTTCGAGTTTTGACATTGACAACG
GCAGGCAAGGCAGCGGGGT---------TTCTGCCGTTCCACGTCGCAAGGGAACAAAAGGGCCACCTCATCAGGAGCGG
GACAGGCTGGACAGGTCGACTCGGCATGAATCGCCGTGCCAAT-GCTGGAAGCCGACAAG-AGATCTCGCGATACAAAAC
CCAGGGACGCCTCCCTGGCCT------------CCACCTCCTCCTCCCCCCCTCCCCTCCTCCTCCACCTGCCTTCCATC
CCTCCCCCCTATGGAGCTCCGGCCGTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGTTCGGTGCCCTCGCTCGCCGCGCCGCGCCGA
ACCAAGGGCGCTGCCCGGTGCCGCGGGGCGCGCAGATGCGAGGCCGGGAGAAATGCAGAAGTCGCGGAGAGACCTCATGA
AGAGGAAGGCGGCGGCCAAGGCGCACGAGCAGAGCGCGGGCGCGGCCGCCGGGATGAGGAGGCGGCGGCTCTACGGCTTC
TCCGCCTCGCTCGTCGTTGCGTCCTGGGTCGCGCTCCTCATCCTCAACTCGCTCGTCGGCCACGGCGACGGTCAACGCGG
TACGCACGGTCCGGGCCTTCTTCTCTCTTCCGTC---CCTGAA-CTCCGAAGTTTCACCTTATGATT-----------AA
TCCTGTGCCGTGCTGCGCGGTGGTTGCGTGGTGCGGCGATCGGTAGATGTTTGGTGGATTGCCCGTGGCTGTCGGTGGTG
CCGCGCAGGCGCGATCGAACC-CCGTTAGGGTTAGATCCG---TAATCCGTATGCGGTTGTTGCGGCTCTCTCTGATC--
--ACAGGCTGCTGGTTGT-TAGATGCGTTGCCGAAATTTCCACGTC-GTGTTCTGTCTCCTAGATTTACTGAACGCTCCT
G---TCAGTTTTTAAATAAATTTGGTTCCGTATTGACTGGGATCACATTTTCTTCATTTGATTTCTGCAGATGGTGGAGA
CCCTATTGTTGCCATTCCCATTGCTGGGCCTGGGCCTACAATGAATGAAGGTTCTGTTAGTCCTGATGTTGTACACCAGG
AGCATGAGGAGAATTTGGCAGTGTCTGCTGACACATGTGTAAAACTTGATGCAAGTGTCTTGCTTTCAGAAGAGACAGTG
CTGCAGGAAGATGAACTGTGTCCCAAGGATGATACCCAAAGTGATGACATGGAAGCTCTAATAGAGGATGATCGAATTGA
GCTGTCGGAAGGTCAGGGCAAGGAACAAACTCTAACCATGGATGATCAAATTCACCTGTCAGAAGGTCGGGGTGAGGAAG
AAGTTCTGGCCAAGGATGATCAAATC------------------------------------------------------
GAGCAGTCAGAAGGTCAGGGTGAGAGTCCTCATCTGACAAACATTGACTCTGTAGCTCATCCAGCGGAGAAGGTGGATGC
TGAAGATGTTCCCAAACCAGCAAGATTGGCACGGATTGTTCCTCCCGGTCTTGATGAATTCAAGACGAGAGCAATTGCTG
AAAGGGGAAAGGATGCCTCTAGTCAAACTGGTCATGTGATCCACCGAAGGGAACCTAGTGGTCAGTTGTACAATTATGCT
TCGGCAGCTAAAGGGGCAAAGGTTCTGGATTTTAACAAGGAGGCCAAAGGCGCTTCCAACATTCTAGACAAAGATAAGGA
TAAGTATCTCCGCAATCCTTGCTCCGTTGAGGGAAAATATGTCATCATAGAGCTTTCTGAAGAAACCTTGGTAGATACCA
TTGCAATTGCAAATTTTGAGCATTACTCTTCTAATTTAAAAGAATTTGAAATGCTGAGCAGTCTTATTTATCCCACAGAA
AACTGGGAAACACTTGGGAGATTCACTGTCGCAAATGCGAAGCATGCTCAGAGTTTCACATTTCCCGAGCCAAAGTGGGC
GAGGTACTTGAAGTTCAATTTGCTAAGCCATTATGGTTCTGCAAGCTATTGTACACTGAGTATGCTTGAGGTGTACGGAA
TGGATGCTGTGGAAAAGATGCTCGAGAACTTGATCCCAGTTGAGAATAGAAATGCTGAATCTGATGACAAATCGAAGGAG
CCAATTGAGCAACCACCTTTGAAGGAGCCTAGTGGTGGAAAAGACTCCTCACAGGAACCCCTTGATGAAGATGAATTTGA
GGTAGAAGATGATAAGCCAAATGGAGATTCATCAAGGAATGGTGTTCATGATCAGATTGTAGAGACAAGGACACTTCAGG
CTGGCAGAATTCCTGGAGATACAGTTCTTAAGATACTGATGCAGAAAGTTCAGTCTCTTGATGTGAGCTTTTCTGTATTG
GAGCGGTACCTAGAGGAACTCAACAGCAGATATGGACAAATTTTTAAGGATTTCGATTCTGATATTGATAGCAAAGATGC
ACTCTTGGAGAAGATAAAATTGGAGTTGAAGGAGCTTCAGAGCAGCAAAAATGACTTTGTATGCAACTTTCTGCACTTGT
GTTTTGTTTCTGCTATTGTTACCCTTAATTTCTGTACCTTATCTTATTAT--GCATTTCCTGTTTTCAGGCGAGAGATAT
TGAAAGTATCCTTTCATGGAAGTCAGTTGCCTCCTCGCAGTTAGACCAACTTGTCCTGGATAATCTCATACTCAGGTTTG
TATTGCTATTCTTTAGTTTCATGGATTTGCATGCGTATTAAGAGAGCATGATATTGCTTGGGACGATTATAACTTTGTGA
ATCATCATGCTGTTGTGTGCAGATCTGAGTATGAGCGATTTCGGGATAAGCAGGTTGACCTGGAGAATAGGAGCTTTGTT
GTTATATTCCTGTGTTTTATTTTTGGATGCCTAGCCATAGCTAAATTGTCCATAGGTATGATATTCAATATTTGTAGGTT
ATATGATTGTGAAAAGTTGGATATGGTAAAATCCGGATGGCTTGTGCTGCTGCTGAGCAGCTGCATTGTGGCCTCCATTT
TGGTAATACAGTGATGTATGTACTCATCTCCATATAATCGCGGCTGCATATTGTAATTCCATGAGGTATCTAATTCAAAA
AAGATCACATCTCTTAGATATTACAAGAATAAAATCTCAGTACAGATTATCTAGCCTCATCATTGATCTCAAATTTGGAG
GAAAAAGGAAAGGAACAAAGTGTGCACCTGTGAAACTGAAGTCATTTTAAAGGTGCAGCCAGACTAGAAGTAGTAAAGTC
TAGAACTAGATTATTTCTGCTCTGGTCCATGCCTCCATGGTCCACTCCAGTGGAATGTAGAAGCAAGACTACCTGGAAAC
CATGTGCGCCCAGCTGGAGCCGGCAATCATAGATGGTTAACCG-------TGGCATGGTCCCATGTGCTTCCTTGTATGA
TTGCCA-------GGGAGAGAAATGTACTGAATATAGCATTTCCCTATGTCTCGCCATGAATCCTGTGCAGTGGATGTTC
TTTATTTTTGGGTGGGCGCCCTGTCCACC---GGTGCACATGGCCTCCACATTGTGTTGCTTACAATTACAATTTACAAG
GCAGTTTGTCCATTTGTTTCCACTTTCCACAATGGAAGGCACCATTGGTACTCTTAACTTCTATTGGTAGTTTCTAAACT
GAAGTCAATGGCTCATCAAAGGTATATGCTCCCTGCACAGCCACATATGT---ACAGCTGTTCTTATCAGTTGAGAGAGT
ATT-TTTTTTGCAAGTTTTTCTATTGCTTCCATGCCCAGCTTCTCAGTTGGA----------ATTTCTGCGTATATCTAT
TTGAACAAGCTATTTGTGATAGTTGACATTTTATTTCATGGATAGATTCATAGAAGGATGGCATTGAAAAATACTTTTGT
CTGAGACATCTGGTTAGCTAGCCAGTGACAGCTCGTTTCTTAAAACTGAGCTGCTCCTGCTCAGTTGACCATGCTTTACA
ATGTGCAAACTGCGGTTTCTTGCTGGATGGATATCCACAGTTTCACGCGGCATTCTCCTATGTCAGCTTCATCATTACTT
TGATCATTCCTA-----------------------------------------------------------------
>SNPs
SS--------------------------------------------------------S----------------S----
--SS-S--S--S----S-----------SS----------S-----S--S--S-------------------------S-
------------SS--------------------S-------------------------------------S------S
-------S------SSSSSSS--S-----------------S-------------------------S------------
-------------------------------S------------------------------------------------
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--------------------------------SS-------------------------------S-----S--------
----------------------------------S-------------------S----S-----S----S---------
------------------------------------------------------------------------SS---SS-
S-----------SS------S---------------------------------------S-------------------
---------------------SSSSSSSSSSSS--S--S-----S----------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------SSSSSS-------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SS-S---------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
------S--------------------S---------------S----------S---SSSSS-----------------
----------------------------------------------S---------------------------------
---S------------------------------------SSS------------------------------SSSSSSS
SS--------------------------------------------S-------------S-------------------
--------------------S------------------S----------------------------------------
----------------------------------------------------------S---------------------
----S--------------------------------------------------------------------------S
--------------------------------------------------------------------------------
------------S-------------------------------S-S-----S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-S--------S-----------------------S
------------------------S--------S-----------S--------------S-------------------
----------------------------------------S---------------------------------------
-------------------------------S------------------------------------------------
---------------------S----------------------------------------------------------
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-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------S--------------------S------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------S--------------------------------------S------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S--------------------S--------
-------------------SS--S---------------------------------------------S----------
--------------S-----------------------S-----------------------------------------
--------------------------------------------------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------S-----
------------------S--------S-SSS-------S----------------------------------------
--------------------------------------------------------------------------------
S-------------------------------------------------------------------------------
----------------------------------S----------S------SSSSSSSSSS------------------
---------------S----------------------------------------------------------------
---------------------S--------------S-------------------------------------------
------------------S---------------------------------------------------S---------
--------S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_3266
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----------------------------------------------TTCCCCACATTTCCCGCATG--------------
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>reverse_5176
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-------------------------------------------------------TTCATCCAGCGGAGAAGGTG-----
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>forward_4560
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------------------------------------------------------------TTGCGCTCTCTCTGATCACC
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>reverse_5392
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-------------------------------ATAACAAGGAGGCCAAAGGC-----------------------------
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>forward_4621
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-----------------------------------------ACGTTTGTGTTCTGTGTCCG-------------------
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>reverse_6522
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-----------------------------------------AGGGATAAGCAGGTTGACCT-------------------
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>forward_4680
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-------------------ACTTGGTTCCGTGTTGACTGA----------------------------------------
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>reverse_6771
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--------------------------------------------------ATGTAATTCCATGAGGTATCTGATTCA---
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-----------------------------------------------------------------------------
