>input_sequence_30319
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----------------------------------------------------ATGGAGGGGGGCGGCGAGGGGAAGGGCC
GGGCGGCGC---------CGGCGGCGGGGGGAGGGTTCGGCGGGTACGAGTCGGCCGGGGACCGCAAGTGGTGGCCCTGG
CTCGTGCCCACCGTCATCGTCGCCTGCGTCGCCGTCTTCGTCGTCGAGATGTGGGTCAACGACTGCCCCAGGCACGGCAG
TGCGCTCGGCGGCGGCTGCGTCGCGGGCTTCCTCCGCCGCTTCTCCTTCCAGCCGCTCCGCGAGAACCCGCTCCTCGGGC
CCTCCTCCACCACGTACGCCTCGGCTTCCCCC--C---------TCTCCCTTCTCCCTTCTGCGTCGTCGAATTGTGCTC
G------GGGTTGGGCGGTGCTCTACTTTCTTGGGTGTGCTTGAGGTGAAATTGGGCGCACAGATTTGGGG-ATTCATCT
TCAGATT-GGTT-GTTTTATCCGCGCTCGTAGTTGATTCGTTGGCAGAACATGGATTTCGTTTTGCTGGTTCTTGCAAGT
GAAGTGAAGCTCGCACCATGAAGCTGCCAATTCTGTTGCTCTGAACTCTGTAGCAAGTGTTACTGGACAGAGGATATCTC
TGGACTTTCCTCCGTCTGCTGTGAGGAAAT---------------------------------CAGAAATGTTCTCTGAA
CTTCCGCTTCTGAATTCAGATGCCTTTTCCTCTTTTGGAAGTTCGGGAGACAGGGGATTCTTCTGTCATGTGGTGGCGAC
ACTTCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAG--TGGCTTGAAATGGTCTG
AACGTGCACAATTCAACATGATTCAGTTGTTCAATGCACTCCACTGTTTAGTTCACCCTGCAGTTCGTCCATACAGTAGC
TTCCACTTATTCGCAAAATAAAAAATAAAAAAAATACAGTAGCTTCCACCGCTACACAACGCAGACAGCTTAAGCTTTCT
CTTCTTTGTTGTTTGTGCCAAAAATAGCTTTCTGAGACAGTCAGCGATGATATTTTCTACTACCTTTTGCTGGATTATAG
CCGGTAATTAGGTGTCCACTTTGTGCTGCAGGCGTAGGATTCTGTGTTATTGTAGTCTAGTAGATGGATTTATGGAAACT
GTTTTGACTTTTGC-AAGTGATGTACTACTAATG-----------------------CTAGACCAT--------------
-------------GTAGTTCTCTCATTGACAGTAGTGGCATGCCCGCTTATTTTAATTGCAACTTGCCATGTTGTAGTAT
CTATCTCATGAGATTGCAGCTCAGTTACCAACCGTTGACAACAAAA-GTTACATGTTTGGTTTGATTTGTGGAGTCAGTC
TAGATTATATTTATCTCACTGAGATACT---GTAGGAAGGGTACATACAAGATGATAAG-GTTAACGGCTTT-GCTCTGT
CTTGCAGTTTGGGGAAAATGGGAGCTCTTGACTGGAACAAAGTTGTCCATCAGCACCAAGGGTGGCGTCTCATTAGCTGC
ATCTGGCTCCATGCTGGCCTAATCCATTTGGTTGTGAACATGCTAAGTCTGCTGTTTATTGGGATTCGTCTTGAGCAGCA
ATTTGGGTTCGGTAAGCTTCTAACAATGCTGTGTGAATCAGTGTGACTATCATCATTTGGGGGATATTATGATAGTCTTT
CTACACGTCAACAAAACTCGTCTGAATGTCTATCTGCTGCAACTCATAGCATTTTAGTTACCCTGGAACTGGTTTCTATT
TTGCAAGTTGAGCTAGTTTAATTGCTGAGGTGTTGACAGTATGCTTAAATCTTACTACTTCAATTATGTTACTAATAT--
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-------------------------------------------------------------------------------T
CAATGTAGATCGAATATTTTTTATTATCAGCATGTTCATATATTGCACATGGCTAAATAACGTGTGCACTGACACTAGTT
CTTTTACTTGCAAGTTCGCATTGGCGCTATCTATCTACTGTCTGGTTTCGGCGGCAGCGTAATGTCCGCACTTTTCCTAC
GGAATAACTACATCTCTGTTGGTGCATCTGGAGCTTTATTTGGGCTGCTTGGATCTATGCTTTCTGAGCTGCTTATGAAC
TGGACAATTTATTCCAACAAGGTGAGAAAGAGAAAGAAACACGCATACATTTTCTTC----TATCCAGCTGCCTG-AACA
CTCTTTTGCTTATC-GAGTTGATGTGCTATTGCAGGTTGCAGCCATAATAACTCTTCTGTTTATAATTGCGATCAACGTG
GCGATCGGGATACTACCGCATGCTGATAACTTTGCTCATATTGGTGGATTCTTGACGGGGTTCCTTTTGGGGTTCGTTCT
GCTGGCTAGGCCACAATTCGGTTGGTTGGAACGCAGCGAGCTACCCCATACTAATCAGCCTCCTAAGTACAAACCATACC
AATATGTCCTGTGGGTTGTGGCACTCGTCTTGCTGCTTGTCGGGTAAGTCTGACAAATTCAC------------------
---------------ACAGACAGTTGGGTATATTCGATGG----------------------------------------
--------ATGGTTCTGAACTTACACTGAACATCATCAAGACCGAGTTATATGATTCAAATTTGTGCTAATGGAAGACAT
GAAATGAATCTGATACCAACAACTTGTGTTACAGGTTCACGCTTTCGTTGGTGATGCTCTTCAAAGGCAAGAACGGGAAT
GACGGCTGCCACTGGTGCCACTACCTGAACTGCGTGCCGACGTCGAGGTGGAAGTGCGATACCTAG--------------
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--
>chr5D_1_TraesCS5D01G320400
GTCGCACAGTACGTTTTTTT-CTGTTAATAATGTCTGAAGACATGGTCAGTCGTACGCTCG-CTCGCCTCGTACCGGACG
GACGGACGGACGGCGAGGTGGAAGAAAGCGACGAGTCGGTCGGTGCTGGTACAGTTGGATGATGA-GTGCTTGGGTCGGG
ACCGGCCGGGCTGGCACGGCGGACATGGCGACGCTACAGCGAGGCCAGTTGAACCTCCGGCCGGATCGGATCAAGACAGA
TGGTACGTACACGCGCATGAAATCAATGCATGCAACGTAGGAGTACAAGTAGTGGAGTACTGCAAGAAGGAAGGAGCCTC
CAGAAAAGTTTCATTTACGGCGCGGTCGGTCGCGGCGCCGAGCACGGCTGTGGCTT-GCGGCAATGTACGAGACCGAGAC
CGGAACCGGAGCGACCCATGGAGAAGCTGGTGGCACGTACGTACGCA----------------CTCCACGTCGGCGCCCG
GTGACGTGACCACCGGCGCG-----TCCCACACGCACGCGCGGCACCTGGCCCAACGGCAACCCGCCA-------CCACG
GCACCGCCTGACGTCGCCGCGCCA------CTCCGC------GTCCACGTCCACGCGCTTCGCGCCGCCGCCTGATCCTC
TCAG----CACGTCTCCCGCGCTCCCTTCTTCCTCACGCGGATCGGTTACAACCACTGCTACTACTTCACCACGCGAACC
GAAACACCACTCACACACGGACTCACCCGGGGACGGACGGACGGACAGCAACGCCTTACCGCGCGGTGGTCCCCGTCGCC
CACGGGGCCCCGCGCGCCAGCGTGCCACAG--------------GCAGCCCCACCCACCCACCGTTGCTCTCTGTCCGCC
TCCCCCGGCCCCGCGCATCATTTCCTTTCCTGTCCCCGTCCCCTCGCTTCCAAGCTACTACCCCGAGCGAGCGAG-----
-------------AGCGCCACTTGACTCCAGCTAGCCTCCTCCTTCCTTCCCCATCCTTCCATCCTCGGCTTGCACATCG
CATCACGTCACCGGAGCCAGCTACGGGCGCGTGGGAC------------AGCATGGAGGGGGGCGGCGAGGGGAAGGGCC
GGGCGGCGC---------CGGCGGCGGGGGGAGGGTTCGGCGGGTACGAGTCGGCCGGGGACCGCAAGTGGTGGCCCTGG
CTCGTGCCCACCGTCATCGTCGCCTGCGTCGCCGTCTTCGTCGTCGAGATGTGGGTCAACGACTGCCCCAGGCACGGCAG
TGCGCTCGGCGGCGGCTGCGTCGCGGGCTTCCTCCGCCGCTTCTCCTTCCAGCCGCTCCGCGAGAACCCGCTCCTCGGGC
CCTCCTCCACCACGTACGCCTCGGCTTCCCCC--C---------TCTCCCTTCTCCCTTCTGCGTCGTCGAATTGTGCTC
G------GGGTTGGGCGGTGCTCTACTTTCTTGGGTGTGCTTGAGGTGAAATTGGGCGCACAGATTTGGGG-ATTCATCT
TCAGATT-GGTT-GTTTTATCCGCGCTCGTAGTTGATTCGTTGGCAGAACATGGATTTCGTTTTGCTGGTTCTTGCAAGT
GAAGTGAAGCTCGCACCATGAAGCTGCCAATTCTGTTGCTCTGAACTCTGTAGCAAGTGTTACTGGACAGAGGATATCTC
TGGACTTTCCTCCGTCTGCTGTGAGGAAAT---------------------------------CAGAAATGTTCTCTGAA
CTTCCGCTTCTGAATTCAGATGCCTTTTCCTCTTTTGGAAGTTCGGGAGACAGGGGATTCTTCTGTCATGTGGTGGCGAC
ACTTCAGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCAG--TGGCTTGAAATGGTCTG
AACGTGCACAATTCAACATGATTCAGTTGTTCAATGCACTCCACTGTTTAGTTCACCCTGCAGTTCGTCCATACAGTAGC
TTCCACTTATTCGCAAAATAAAAAATAAAAAAAATACAGTAGCTTCCACCGCTACACAACGCAGACAGCTTAAGCTTTCT
CTTCTTTGTTGTTTGTGCCAAAAATAGCTTTCTGAGACAGTCAGCGATGATATTTTCTACTACCTTTTGCTGGATTATAG
CCGGTAATTAGGTGTCCACTTTGTGCTGCAGGCGTAGGATTCTGTGTTATTGTAGTCTAGTAGATGGATTTATGGAAACT
GTTTTGACTTTTGC-AAGTGATGTACTACTAATG-----------------------CTAGACCAT--------------
-------------GTAGTTCTCTCATTGACAGTAGTGGCATGCCCGCTTATTTTAATTGCAACTTGCCATGTTGTAGTAT
CTATCTCATGAGATTGCAGCTCAGTTACCAACCGTTGACAACAAAA-GTTACATGTTTGGTTTGATTTGTGGAGTCAGTC
TAGATTATATTTATCTCACTGAGATACT---GTAGGAAGGGTACATACAAGATGATAAG-GTTAACGGCTTT-GCTCTGT
CTTGCAGTTTGGGGAAAATGGGAGCTCTTGACTGGAACAAAGTTGTCCATCAGCACCAAGGGTGGCGTCTCATTAGCTGC
ATCTGGCTCCATGCTGGCCTAATCCATTTGGTTGTGAACATGCTAAGTCTGCTGTTTATTGGGATTCGTCTTGAGCAGCA
ATTTGGGTTCGGTAAGCTTCTAACAATGCTGTGTGAATCAGTGTGACTATCATCATTTGGGGGATATTATGATAGTCTTT
CTACACGTCAACAAAACTCGTCTGAATGTCTATCTGCTGCAACTCATAGCATTTTAGTTACCCTGGAACTGGTTTCTATT
TTGCAAGTTGAGCTAGTTTAATTGCTGAGGTGTTGACAGTATGCTTAAATCTTACTACTTCAATTATGTTACTAATAT--
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-------------------------------------------------------------------------------T
CAATGTAGATCGAATATTTTTTATTATCAGCATGTTCATATATTGCACATGGCTAAATAACGTGTGCACTGACACTAGTT
CTTTTACTTGCAAGTTCGCATTGGCGCTATCTATCTACTGTCTGGTTTCGGCGGCAGCGTAATGTCCGCACTTTTCCTAC
GGAATAACTACATCTCTGTTGGTGCATCTGGAGCTTTATTTGGGCTGCTTGGATCTATGCTTTCTGAGCTGCTTATGAAC
TGGACAATTTATTCCAACAAGGTGAGAAAGAGAAAGAAACACGCATACATTTTCTTC----TATCCAGCTGCCTG-AACA
CTCTTTTGCTTATC-GAGTTGATGTGCTATTGCAGGTTGCAGCCATAATAACTCTTCTGTTTATAATTGCGATCAACGTG
GCGATCGGGATACTACCGCATGCTGATAACTTTGCTCATATTGGTGGATTCTTGACGGGGTTCCTTTTGGGGTTCGTTCT
GCTGGCTAGGCCACAATTCGGTTGGTTGGAACGCAGCGAGCTACCCCATACTAATCAGCCTCCTAAGTACAAACCATACC
AATATGTCCTGTGGGTTGTGGCACTCGTCTTGCTGCTTGTCGGGTAAGTCTGACAAATTCAC------------------
---------------ACAGACAGTTGGGTATATTCGATGG----------------------------------------
--------ATGGTTCTGAACTTACACTGAACATCATCAAGACCGAGTTATATGATTCAAATTTGTGCTAATGGAAGACAT
GAAATGAATCTGATACCAACAACTTGTGTTACAGGTTCACGCTTTCGTTGGTGATGCTCTTCAAAGGCAAGAACGGGAAT
GACGGCTGCCACTGGTGCCACTACCTGAACTGCGTGCCGACGTCGAGGTGGAAGTGCGATACCTAGGCGGTCCCTTCTTT
CGGTTTTCGACGAAAACGCGTAGTGTTGAGAGGACCA-TTTTCATGCTTGTATGTTTGTAGATAGGAACTGTGGT--GTT
AATTAAGTTTGTTCGTTAGCGAATTCTGTAAATTTGTTTGCCAGGTCCTGTAAGTTTGTAATTCGAGCACCTCTCCAGTG
ATTTCATGCGTGTTTTTGTGTAAGAGGCCGTATCGTTTTGATCCTTGCTTTTGCGTTGGTCCGGCAGCCGATTCGACGAT
TCGTGTGGCGCTTGACGCGCTATGTAACGTATAATAAGTAACGCTGTTGAAATGGTAACATCCAGAGCCGTCCTAGCTCA
GTGGTAGAGCGCGTGGCTTTTAACCACGTGGCCGTGGGTTCGATCCCCACGGACGGCGTTATGCGTT-------TTTTTG
CTTTTTAACCACGTTTTTGTTGAGCAAACCAGGGAGAAGATTCATAGATTAGCACGTCTATATTGA--------------
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----------------------------------------------------------TTCTATTATCCGTA-ATTTTTT
GGACTAAACACGAACAAACC------------------------------------------------------------
-----TAAGCTCTCATGAAATAGACTGAATCAATCAGCCAACAACGACATAAGACTGTTTTGCTTTCCATCAGGATTTTG
AACAATCG--------------GCCTAGACAGAAGATCTGCGTTGTGAGAGAAGA---TCTCTCTAGGCTAACACG----
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----------------------------TTTAGCTTTTTTGTTT------------------------------------
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-------------------------------------------------------------TCGAGCCAATCAGCCTAGA
GAGAAGATTCGCACGTTCTGTATGAGAGCAAATTAGACTGAGTACTCAATTAGACTTGAATCAACCAAGCACGCCACGTG
AATGACATCCGCACTTGCAATATTTATACTACTTCAAAGAGGATAATTATTATTTATGTT--TCTTTACAAAAACAGAGG
ATAAACATAGGCCACAATACAGGCAAAGCAACCAAACTATACATAAAGGCCCTGTTTGGTTCGGCTGTGGATTTCTAAAA
GTAGCTGTGAAAAATCTGTTGTGGAAAAACAGCTATGGAAAATCTGATGTGAAAAAGACGTAGGTCATTTGTCAAACCAG
CT
>chr5B_8
-------AGTACGTTTTTTTCCTGTTAATAATGTCTGAAGACATGGTCAATCGTACGCTCGCCTCGCCTCGTACCGGACG
GACGGACGG----CGAGGCGGAAGAAAGGGACGAGTCGGTCGGTGTTGGTAGGTACAGTTGGACGGGTGCTTGGGCCGGG
ACCGGCCGGGCTGGCACGGCGGACATGGCGACGCTACAGCGAGGCCAGTTTAAACTCCGGCCGGATCAAGACC-----GA
TGGTACGTACACGCGCATGAAATGAATGCATGCAACGTAGTACTAGTT--------GTACTGCAAGAAGGAAGGAGCCTC
CAGAAAAGTTTCATTTACTGCGCGGTCG-----------GAGCACGGCTGTGCCTTTGCGGCAATGTACGAGACCAAGAC
CGGAACCGGAGCGACCCGTCGCGAAGCTG---------------GTGGTAGGCAACGTACGCGCTCCACGTCGGCGCCCG
GTGACGTGGCGACCGGCGCG-----TCCCACACGCACGCGCGGCACCTGGCCCAACGGCAACCCGCCACCACGGTCCACG
GCACCGCGTGACGTCGCCGCGCCAGCTCCACTCCGG------CTCCACGTCCACGCGCTTCGCGCCGCCGCCTGATCCTC
TCAG----CACGTCTCCCGCGCTCCCTTCTCCCTCACGCGGATCGGTTACAACCACTAGTACTACTTCACCACGCGAACC
GAAACACCACACACACTCACA--CACCCGGGGACGGACGGACGGACAGCAACGCCTCACCGCGCGGTGGCCCCCGGCGCC
CACGGGGCCCCGCGCGCCAGCGTGCCACAGGT----------------CCCCACCCACCCACCGTCGT----TGTCCGCT
TCCCCCGGCCCCGCGCATCATTTCGTTCCCTGTCCCCGTCCCCTCGCTTCCAAGCTACTACCCCGAGA----------GA
GAGCGAGAGAGCAAGCGCCACTTGACTCCAGCCAGCCTCCTCCTTCATTTCCCATCCTTCCACCCTCGGCTTGCGCATCA
CATCACGTCACCGGAGCCAGCTACGGGCGCGTGAGACTAG--------CAGCATGGAGGGGGGCGGCGAGGGGAAGGGCC
GGGCGGCGCCGGCGGCGGCGGCGGCGGGGGGAGGGTTCGGCGGGTACGAGTCGGCCGGGGACCGCAAGTGGTGGCCCTGG
CTCGTGCCCACCGTCATCGTCGCCTGTGTCGCCGTCTTCGTCGTCGAGATGTGGGTCAACGACTGCCCCAGGCACGGCAG
CGCGCTCGGCGGCGGCTGCGTCGCGGGATTCCTCCGACGCTTCTCCTTCCAGCCGCTCCGCGAGAACCCGCTCCTCGGGC
CCTCCTCCACCACGTACGTCTCGGCTTCCCCCTCTCTCCCTGTTTCTCCCTTCTCCCTTCTGCGTCGTCCAATTGTGGTC
G------GGGTTGGGCGGTGTTCTACTTTC-TGGGTGTGCTCGAGGTGAAATTGGGCGGACAGATTTGGGG-ATTCATCT
TCAGATT-GGGTCGTTTTATCCGCGTTACTAGTTGATTCGTTGGCAGAACATGGATTTTGTTTT----------------
--------------------AAGCTCACAATTCTGTAGCTCTGAACTCTGGAGCAAGTGTTACTGGCCA-----------
----------------------GAGGAAAT---------------------------------TAGAAATGTTCTCTGAA
CTTTCGCTTCTGAATTCAGATGCGTTTTCCTCTTCTGGAAGTTCGGGAGACAGGGGATTCTTCTGTCATGTGGTGACGAC
AGTTCAGATCT--------CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCAATGGCTTGAAATGATCTG
AACGTGCACAATTCGATATGATTCCATTGTTCAATGTGCTCCACTGTTTAGTTTACCCTGCACTTCGTCCATACAGTAGC
TTCCAC-------------------------------------------CGCTACACAACGCAGACAGCTTAAGCTTTCT
CTTCTTTGTTGTTTGTACCAAAAATAGCTTTCTGAGACAGTCAGCGATGACATTTTCTACTACCTTTTGCTGGATTATAG
CCGGTAATTAGGTGTCCACTTTGTGCTGCAGGCGTAGGATTCTGTGTTATTGTAATCTAGTAGATGGATTTATGGGAACT
GTTTTGACTTTTGGTAAGTGATGTACTACTAATG-----------------------CTATAAAACAACCCAAGCTGTTT
CTAGACCATGTAAGTAGTTTTCTCGTTGACAGTAGTGGCATGCCCGCTTATTTTAATTGCAACGTGCCATGTTGTAGTAC
CTATCTCATGAGATCGCAGCTCAGTTACCAACCGTTGACAACAAAAAGTTACATGTTTGGTTTGATTTCTGGAGTCAATC
TAGATTATATTTATCTCACTAAGATACA---GTAGGA----TACATACAAGATGATAAGAGTTAACGGCTTT-GCTCTGT
CTTGCAGTTTGGGGAAAATGGGAGCTCTTGACTGGAACAAAGTCGTCCATCAGCACCAGGGGTGGCGTCTCATTAGCTGC
ATCTGGCTCCATGCTGGTCTGATCCATTTGGTTGTGAACATGCTAAGCCTGCTGTTCATTGGAATTCGTCTTGAGCAGCA
ATTTGGGTTTGGTAAGCTTCTAACAATGC----TGAATCAGTGTGACTATCATCATTTGGGGGATATTTTGTTAGTCCTT
CTACACGTCAACAAAACTCGTCTGAGTGTCTATCTGCTGCAAGTTATAGCATTTTAGTTACCCTGGAACTGGTTTGTATT
TTGCAAGTTGAACTAATTTAATTGCTGAGGTGTTGACAGTATGCTTAAATCTTACT---TCAATTATGTTACTAATAT--
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
CAATGTAGATTGAATGTTTTTGATTATCAGCATGTTTATATATTGCACATGACTAAATAACGTGTGCACTGACACTAGTT
CTTTTGCTTGCAAGTTCGCATTGGCGCTATCTACCTACTGTCTGGTTTCGGTGGCAGCGTGATGTCTGCACTTTTCCTCC
GAAATAACTACATCTCTGTTGGTGCATCCGGAGCTTTATTTGGGCTGCTTGGATCTATGCTTTCTGAGCTACTTATGAAC
TGGACTATTTACTCCAACAAGGTCTGAGATAGATAG-AACACACATACATTTTCCTCTAGATATCCAGCTGCCTG-AACA
CTCTTTTGCTTATCAGAGTTGATGTGCTATTGCAGGTTGCAGCCATAATAACTCTTCTCTTCATAATCGCGATCAACGTG
GCAATCGGGATACTACCGCATGCTGATAACTTTGCTCATATTGGTGGATTCTTGACCGGGTTCCTTTTGGGGTTTGTTCT
GCTGGCAAGGCCGCAATTCGGTTGGTTGGAACGCAGCGAGCTGCCCCACACTAATCAGCCTCCTAAGTACAAACCATACC
AATATGTCCTGTGGGTTGTGGCACTCGTCTTGCTGCTCGTCGGGTAAGTCTGACAATTCACA------------------
----------------CAGACAGTTGGGTATATTCGATGCCGCTGTGATTATATCAATGTTTTGCACATGTGTAGTGTAA
AAATACGCATGGTTCTGAACTTACACTGAACATCATCAAGACCGAGTTATATGATTCAAAGTCGTGCTAACGGAAGACAT
GAGATGAACCTGATACCAAGAACTCGTGTTACAGGTTCACGCTTTCGTTGGTAATGCTCTTCAAGGGCAAGAACGGGAAC
GACGGCTGCCACTGGTGCCACTACCTGAACTGCGTGCCGACGTCGAGGTGGAAGTGCGATACCTAGGCGGTCCCTTCTTT
CGGTTTTCGACGAAAACATGTAGTGTTGGGAGGACCATTTTTCATGCTTGTATGTTTGTAGATAGGAACTGTGGTCTGTT
AATTAAGTTTGTTCGTTAGTGAATTCTGTAAATTTGTTTGCCAGGCCCTGTAAGTTTGTTACTCGAGCA---CTCCAGTG
ATTTCATGCGTGTTTTTGTGTAAGAGGCCGCATCGTTTTGATACCTGCTTTTGCGTTGGTCCGGCAGCCGA--------T
TCATGTGGCGCTTGACGTGCTAAGTAACGTATAATAAGGAATGCTGTTGAACTGGTAACATCCGTAGCCGTCCTAGCTCA
GTGGTAGAGCGCGTGGCTTTTAACCACGTGGCCGTGGGTTCGATCCCCACGGACGGCGTTTTTAGCTTTATTCATTTTTG
TTTTTTGAACCACGTTTTGTTGAGCAAACCAGGTGGAAGATTCATGGCATAGCATGTCTATATTGA--------------
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----------------------------------------------------------CTGTATGACCAGTACATTTCTT
GGACTAAACACGAACAGACAGACCTTAGGCTCTCATGGAAAAGACTGAATCAGCCAACACGACATAAGACTTTATTGACA
GACCTTAGGCTCTCATGAAAAAGACTGAATCAGCCAAC-----ACGACATAAGACTTTATTGCTTTTCAGTAGGATTTTC
AACAATCGACTTGAGCCAATCAGCCTGGAGAGAAGATTCGCACGTTCTGTATGAGAGCAAATCAGACTGAATCGACCAAA
CACGTCACGTGACTGACATCCGCATTTGCAATATTTATACTATTTCAAAGAGGAATATCATTATTCATGTTTCTCTTTAC
AAAAACAGAGGACAAACATAGGCGACAATACAGGCAAAGCAACCAAACTATACATAAAGCATAACAACAACCAGTATGCT
GCCCAATTCTCTAGTGAGATTTGTCGTTTTTAGCTTTATTCATTTTTGTTTTTTGAACCACGTTTTGTTGAGCAAACTAG
GTGGAAGATTCATGGCATAGCATGTCTATATTGACTGTATGACCAGTACATTTCTTGGACTAAACACGAACAGACAGACC
TTAGGCTCTCATGGAAAAGACTGAATCAGCCAACACGACATAAGACTTTATTGACAGACCTTAGGCTCTCATGGAAAAGA
CTGAATCAGCCAACACGACATAAGACTTTATTGCTTTTCAGTAGGATTTTCAACAATCGACTTGAGCCAATCAGCCTGGA
GAGAAGATTCGCACGTTCTGTATGAGAGCAAATCAGACTGA------------------ATCGACCAAACACGTCACGTG
ACTGACATCCGCACTTGCAATATTTATACTATTTCAAAGAGGAATATCATTATTCATGTTTCTCTTTACAAAAACAGAGG
ACAAACATAGGCGACAATACAGGCAAAGCAACCAAACTATACATAAAG--------------------------------
--------------------------------------------------------------------------------
--
>chr5A_244
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTACACGCGCATGAAATGAATGCATGCAACGTAGCAGCAGCAGTACTACA--ACTACAAGAAGGAAGGAGCCTC
CAGAAAAGTTTCATTTACGGCGCGGTCCGGCGGCAAGCACCGGCCCCTGAAACTTGCGCCGTAGC-----AGACCAAGAC
CGGAACCGGAGCGACCCGTCGAGAAGCTG---------------GCA----------------CTCCACGTCGGCGCCCG
GTGACGTGACCACCGGCGCGGCGCGTCCCACACGTACGCGCGGCACCTGGCCCAACGGCAGCCCG---------------
----------------CCACCCCAGCTCCACCCCGCGTCCACCTCCACGTCCACGCGCTTGGCGCCGCCGCCTGATCCTC
TCACCTCTCACGTCTCCCGCGCTCCCTTCTTCCTCACGCGGATCGGTTACAACCACTAGTACTACTTCACCACGCGAACC
GAAACACCACTCAC------------CCGGGGACGGACGGACGGACAGCAACGCCTCACCGCGCGGTGGCCCCCCTCGCC
CACGGGGGCCCGCGCGCCAGCGTGCCACAGGCCCCCCCGCAGCCGCAGCCCCACCCACCCACCGTCGCTGTCTGTCCGCC
TCCCCCGGCCCCGCGCATCATTTCCTTCCCTGTCCCCGTCCCCTCGCTTCCAAGCTACTACCCCGAGCGCGCGAGAGCGA
GAGCGAGCCAGCCAGCGCCACTTGACTCCAGCTCCT----TCCTTCCCTCCCCATCCTTCCGTCCTCGGCTTGCACATCA
CATCGCGTCACCGGAGCCAGCTACGAGCGCGTGAGACCAGCAGCGGGACAGCATGGAGGGGGGCGGCGAGGGGAAGGGCC
GGGCGGCGC---CGGCGACGGCGGCGGGGGGAGGGTTCGGAGGGTACGAGTCGGCCGGGGACCGCAAGTGGTGGCCCTGG
CTCGTGCCCACCGTCATCGTCGCCTGCGTCGCCGTCTTCGTCGTCGAGATGTGGGTCAACGACTGCCCCAGGCACGGCAG
CGCGCTCGGCGGCGGCTGCGTCGCGGGATTCCTCCGGCGATTCTCCTTCCAGCCGCTCCGCGAGAACCCGCTCCTCGGGC
CCTCCTCCACCACGTACGTCTCCGCTTCCCCTCTC---------TCTCCCTTCTCCCTTCTGTGTGGTCCAATTGCGCTA
GGGGACTGGGTTGGGCGGTGTTCTGCTTTC-TGGGTGTGCTCGAGGTGAAATTGGGCGGACGGATTTGGGGGATTCGTCT
TGAGATTGGGTT-GTTTTATCCGCGTTCCTAGTTGATTCGTTGGCAGAACATGGATTTTGCTTTGCTGGTTCTTGGC---
-AAGTTAAGCTCGCATCATGAAGCTGTCAATTCTGTTGCTCTGAACTCTGGAGCAAGTGTTACTGGTCA-----------
----------------------GAGGAAATCTCTCAACTCTCCTCCTTTTGCTGTGAGGAAATCAGAAATGTTCTCTGAA
GTTTCGCTTCTGAATTCAGATGCCTTTTCCTCTTCTGGAAGTTCGGGAGACAGGGGATTCTTCTGTCATGTGGTGGCGAC
AGTTCAGATCT--------CCCTCCCTCTCTC--------------------------CAG--TGGCTTGAAATGATCTG
AACGTGCACAATTCGACATGATTCCATTGTTCAATGCACTCCACTGTTTAGTTTACCCTCCACTTCGTCCAAACAGTAGC
TTCCAC-------------------------------------------CAGTACGCAACGAAGACAGCTGAAGCTTTCT
CTTCTTTGTTATTTGTGCCAAAAATAGCTTTCTGAGACAGTCAGCGACGATATTTTCTACTACCTTTT-----------G
CCGGTAATTAGGTGTCCACTTTGTGCTGCAGGCGTAGGATTCTGTGTTATTGTAGTCTAGTACACGGGTTTATGGAAACT
GTTTTGACTTTTGCTAAGTGATGTAGAACTAATGCTATAAAACAACCCAAGCTGTTTCTAGACCAT--------------
-------------GTAGTTTTCTCGTTGACAGTAGTGGCATGCCCGCTTATTTTAATTGCAACTTGCTATGTGGTATGTG
---TCTCATGAGATTGCAGCTCAGTTGCCAACCGTTGACCAG-AAAAGTTCGTTGTTTGGTTTGATTTGTGTAG------
----TTATATTTATCTCTCTAAGATACTACTGTAGGA----TACATACAAGATGATAAA-GTTAACGGGTTAAGCTCTAT
CTTGCAGTTTGGGGAAAATGGGAGCTCTGGACTGGAACAAGGTTGTCCATCAGCACCAGGGGTGGCGTCTCATTAGCTGC
ATCTGGCTCCATGCTGGCCTGATCCATTTGGTTGTGAACATGCTAAGTCTGCTGTTTATTGGGATTCGTCTTGAGCAGCA
ATTTGGGTTTGGTAAGCTTCTCACAATGC----TGAATCAGTGTTACTAGCATCATTTGGGAGATATTCTGTTAGTGTTT
CTACACGTCAACAAAACTCGTCTGAGTGTCCGTCTGCTG------------TTTTAGTTACACTGTAACTGGTTTCTATT
TTGCAAGTTGAGCTAGTTTAATTGCTGAGGTGTTGACAGTATGCTTAAATCTTACTTTATTTATGTCACTCCCTGATCCA
TATCAATTGCCGCTAGTTTAGTACTCTCTCTGTAAAGAAATATAAGAGCATTTAGATCACTATTTTATTGATCTAAACAC
TCTTATATTTGTTTACGGAGGGAGTACAACATTGTACTAAACCAGCGTCAATTAATATGGATCAGAGGGACTACTAATAT
CAATGTAGATAGAATATTTTTGATTATCAGCATGTTTATATATTGCACATGAC--------------------ACTAGTT
CTTTTGCTTGCAAGTTCGCATTGGCGCTATCTACCTACTGTCTGGTTTCGGTGGCAGCGTGATGTCTGCACTCTTCCTAC
GAAATAACTACATCTCTGTTGGTGCATCTGGAGCTTTATTTGGGCTGCTTGGATCTATGCTTTCTGAGCTACTTATGAAC
TGGACTATTTACTCCAACAAGGTCCGAGATAGATAG-AAAACACATACATTTTCCTCTATATATCCAGTTGCCTAAAACA
TTGTTTTGCTTATC-AAGTTCATATGCTATTTCAGGTTGCAGCCATAATAACCCTTCTGTTTATAATCGCGATCAACGTG
GCAATCGGGATACTACCGCATGCTGATAACTTTGCTCACATTGGTGGATTCCTGACCGGGTTCCTTTTGGGGTTCGTTCT
GCTGGCAAGGCCACAATTCGGTTGGTTGGAACGCAGCGAGCTGCCCCATACCAATCAGCCCCCCAAGTACAAACCATACC
AATATGTCCTGTGGGTTGTGGCACTCGTCTTGCTGCTTGTCGGGTAAGTCTGACAAATCACATCTCATAAAAAAAATAGT
CTGACAAATCGCACGACAGTTAGTTTTGAATATTCGATGCCGCTGTGATTATCGTTGTTTGTACATG-------------
---------------------TACACTGAAAATCATCGAGACCGACTTATATGATCCAGAGTCAAGCTAACGGCTGATAT
GAAATGAATCTTATACCGAGAACTCGTGATGCAGGTTCACGCTTTCGTTGGTGATGCTCTTCAAGGGCAAGAACGGGAAT
GACGGCTGCCACTGGTGCCACTACCTGAACTGTGTGCCGACGTCGAGGTGGAAGTGCGATACCTAGGCGGTTCCTTCTTT
CGGTTTTCGACGAAAACCCGTAGTGTTGTGAGGACCA-TTTTCATGCTTGTATGTTTGTAGATAGGAACT----------
---------TGTTCTTTAGTGAACTCTGTAAATTTGTTTGGCAGGCTCTGTAAGTTTGTAACTCGAGCAC-TCTCCAGTG
ATTCCATGCGTGTTTTTGTGTAAGAGGCCGTATCGTTTTGATCCCTGCTCTTGGGTTGGTGAAGCAGTCGA--------T
TCGTGTGGCGCTTGACGTGCTAAGTAACATATAATAAGCTATTCCGTTGAAATGGTAACATCCAGAGCCGTCCTAGCTGA
GTGGTAGAGCGCGTGGCTTTTAAGCACGTGGCCGTGGGTTCGATCCCCACGGACGGCGTATGTTT-TTTCTTCCTTCTTG
CTTTTT-AACCACATCTTGTTGAGCAAACCAGGGAGAAGATTCATAGATTATAGCCGGCTGATTATAGCTTGCGCATCCG
CCGGACGCTGCACCGTTCGATCGCTTCATCGTGATTTCACGCCACGCTGGAAGTGTTCACACGGAGCGTGCAGGTGCGTG
GGCTTCTATGGGTTCATTGTTTGATTTTTTCCATATACCGTGCGGTGTGACTCTGACTTAGAGCCTTTCATATTTGCCAT
CTTGCTGGGATGTCACGCTTCTCACGGGATGAAACTGACTTCCCACAATCTCTTCTTTCTGCAACAAGATCTCTGTTGCA
AAAAAAAGCATCGAGACCTCTGTTACGAAAATAATTAACTGCAGCAAGGCCTTTGTTGTACAAAAGATTGTAACATGACC
TCCATTGCAAAAACGAAAATTGCAACATGAACTCCGTTGCAATTTTTTTAACAATGCCCCGGTTACAAAAAAAATCTACA
ACTTTATCTATATTTTGCAAAATTTTCCGCAACATGACCCGTGTTGCAGAAAATTATCGCAACACTACATTTGTTGCAAT
GGTAGAGGATAATGCTCGGCCACTCAATTCGTCAGATCCACGTCTCGCATGCGCAACCGTCAGATACGAGCTTCCGTCAC
ATGCGCAGCCGTCAGATACGAGCTTGAGCAGCCGACACACAACCGGCCAGGACCTTCACCACTAGACGCAAAAGTCCTTC
CACAACAACACCCATGTTGCAGAAGTCCTTCCGAAACAACACTCATGTTGCAAAAAGGTTAAGATGAAAAAAATTCTGCA
ACATCATTTGTGTTGCAGAAGTCTTTCCACAACAATACCCATGTTGGCAAAAATTTAAGAAAAAGAAAGTTCTACAACAT
CATTTGTGTTGCAAATTTCTTCCGCAACGACACTCATATTTCAAAAGAGTTCAGACAAAAAGAACTCTGCAACAACACCT
CTGTTGCAAATGTTTCTGCAATAAGAGGTCTGTTGCAACGCTGAGGAAGGAACCGCGCCACTGGATTGCCCTGACCAAAT
GGATGCGAAGGCGGCGGATCTTTTTAAAAGATCCGCTGGCCGACGCCTAGTGTCCCCCTTATATTATCTGTA-ATTTGTT
GGACTAAACACGAACAAACC------------------------------------------------------------
-----TAAGCTCTCATGAAAAAGACTGAATCAGCCAAC-----ACTACATAAGACTGTCTTGCTTTTCAGCAGGATTTTG
AACAATCGGCCTAG----------------AGCAGATCTGCATTGTGAGAGAAGATCTTCTCTCTAGGCTAACACG----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------TTTAGCTTTTT-GTTT------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------TTGAGCCAATCAGCCTAGA
GAGAAGATTCGCACCTTCTGTATGAGAGCAAATCAGTC------------------TGAATCAACCAAGCACGCCACGTG
AATGACATCCCCACTCACAATGTTTATACTACTTCAAAGAGGAATATTATTATTCATGTT--TCTTTACAAAAACTATAC
ATAAA-----GCAACAATAGAGGCAAAGCAACAAAACTATACATAAAG--------------------------------
--------------------------------------------------------------------------------
--
>SNPs
SSSSSSS------------------------------------------S------------------------------
---------SSSS-----S---------S----------------S-----SSSSSS-S--SSSS----------S----
--------------------------------------------------S--S-------------SSSS-SSSSSS--
-----------------------S----------------S----SS----S-SS-------------------------
-----------------------------S--SSSS--S-------------S----------------------S----
-----------------S-S---------SSSSSSSSSSSSSSS------------------------------------
--------------------------------------------------------------------------------
-------S----------------------------------S-------------------------------------
---------------------------------------------------------SS---------------------
----------------S-SS-SS---------------------------------S------------S----------
-----------------------------------------------------------------S---S----------
---------------------------S-----------------------------------------S----------
-------------------------------------------------------------------------------S
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S--------------------------S--------S-------------------------------------------
------------------S--------------------------------------------------S----------
--------------------S---------S----------S----------------S---------------------
-------------------------S--S-----------------------------S----------------SSSSS
S----S---------S----------S-----------------------S---------------S--SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------------
---S------------------------------S---------------------------------------------
-S---------SSSSSSSS--------------------------------------------------------S----
--------------S---------SS---------------------------S--------S-----------------
------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S----S------------------------------------------------------S
-----------------------------------------------------------------------------S--
--------------------S----------------SSSS---------------------------------------
----------------------------------------------------------S---------------------
--------------------S-----------------------------------------------------------
---------S-------------------SSSS-----------------------------------S--S--------
-------------------------S----------------S-S-----------------------------------
--------------------------------------------------------SSS---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S----------S--------------S--------------S----------------------------
-----S---------------------------S-----------------S--------S-----S-------------
-S--------------------------------------------------------------------S---------
-----S-----S-----------SS--S-S---S--S-----S-----------S-------------------------
-------------------------------------------------------------------S------------
--S-----------------------------------------------------S-----------------------
------S-----------------------------------S-------------------------------------
----------------------------------------------------------SSSS------------------
---------------------------------------S----------------------------------------
------------------------------------------------------------S-S-------S---------
-------------------S----S---------------------------------------S---------------
--------------------------------------------------------------------------------
-----------------S----------S---------------------------------------------------
-------------------S-------------------------S---------------S--------S---------
--------------------------------------------S--------------------------SSSSSSSS-
-----------------S----S---------------S--S--------------------------------------
------------------------------------------------------------S-SS-S--------------
------S-S-SSSS------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------S--------S--
--------------------------------------------------------------------------------
--------------------S-----------SS--S-SSSSS---------------S-------S--S----------
--------------------------S--S-----------S--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------------------------S-------SSSSSSSSSSSSSSS------------------------
-------------------------------------------SS---------S-------------------------
------------S-----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SS
>forward_737
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ACC
GAAACACCACTCACACA---------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_1684
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---ACTTTCCTCCGTCTGCTGTG---------------------------------------------------------
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--
>forward_1499
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---------------------------------------CTTGAGGTGAAATTGGGCGC---------------------
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--
>reverse_3234
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---------------------------------TCTACTGTCTGGTTTCGGCG---------------------------
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--
>forward_1549
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---------GGTTGTTTTATCCGCGCTCG---------------------------------------------------
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--
>reverse_3607
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------TAGGCCACAATTCGGTTGGT------------------------------------------------------
--------------------------------------------------------------------------------
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--
>forward_1702
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--GACTTTCCTCCGTCTGCTGT----------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_3985
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----------------------------------------------------------------AGGCAAGAACGGGAAT
GACG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>forward_3282
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--------------------------------------------------------------TGTCCGCACTTTTCCTAC
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--
>reverse_6533
--------------------------------------------------------------------------------
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----------------------------------------------------TGTTTGGTTCGGCTGTGGAT--------
--------------------------------------------------------------------------------
--
