>input_sequence_30306
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-------ATGGTGTCCGGCTCCGGTGTGTCCGCGCGTCGCGTGGTGGTGGATGCGCGCCACCACATGCTGGGTCGCCTTG
CGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTCCGGTGCGAGGAGATGTGCATCTCCGGCGGG
CTGGTCCGTCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGCGGATGAACACCAAGCCCTCGCACGGCCCCATCCACTT
CCGCGCCCCCTCGCGCATTTTCTGGCGCACCGTGCGCGGC----------------------------------------
--------------------------------------------------------------------------------
----------ATGATCCCGCACAAGACGCCCCGCGGCGAGGCTGCGCTCGCCAGGCTCAAGGCGTTCGAGGGCGTCCCGC
CGCCTTACGATCGCACCAAGCGTATGGTCATCCCCGACGCGCTCAAGTACGCGCCTTATCTTTGTTGCTTGCGCTCTAAT
GGCGGATTTAATTAGTTATGTGGTGATGGTCTTTGTCTGACTACTTGTTGGATAGGGTTCTGAGGCTGCAGCCGGGGCAC
AGGTACTGTCTGCTCGGCGAGCTTTCCAAGGAGGTCGGATGGAACTACCATGAAACTATCAAGGTACGTTTTGTTACAAT
CGATCACTCTGGGTGTCACCTCTGAACAAAATGATGAGT-ATGTGATGCATACATATGACTCTTTGGCCCACAATGTTAG
ATTGTGGTGGTTGTCCTGTGGGTTTAGTTTGTAGATGTCAACCAGATTGTTATTGAGAATTTGAGATAATAGCTTCTCAC
TGTGTGGCTAAGTCAAAATTATTTGCTGTCGAGCTGAAACACAGGTTAGGTTAATCGTTGCCATGGAATAAGGCTTTCGA
TAGTGATAGGGTGAAATGCTGAATTGTATAAGCCTATTTTACTGATTTTAACAAAAGGCACTG--TCAAGTTTCCTTTTG
TGCTTAGCCTAGTACCTTCCATCAGTAC---CCTTGTTAAGTGCATTGAGAACTGTTT-TTGTGCCATTTGAATTTGTTG
ATTTTTCACATTGCAA-GTGTGCAAATTTAGCATGACTGGGATGATGCAGAAACTCAGGACTGATGTCCATTGATTTTTC
ACAAAGATGATGCTTACAACCAGCTACTTCTGACTAGTCATGCTATTTTTTTGACAGCAAAAGCTATTTTAATTCGTCTG
TTCCCTCATGTCTGACGATAGACATGTTTTTCTTTTAGCCTGATTCTGATTAATTTTGTCAATGATGATTTCTGATTGAT
CATGGCATTTGTTGCCACATTCCATTGTAAGATTCTCATGTAGTAACATTTGGCTGTGGTTATTATCATGTCCTTTTGTT
GGTTTCTCTTGTGTTTTAATGATATGCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGGTGCTGCCCAGTTGACG
ACTATAACCACCAAGATCTCTGAGGCGTATTTAACAACCAGCGATTCTTATTGTTATTTAAAATTTGTTGGCTAGTTCGT
TTCAATAATTTGAACTCAGATA-CAAATCATAAAACTGCGATTTGGACTTTGGCACCTGTTCCTCATTCAACATTTGTCT
GTGGCTTTTAGCCTGTTCTTTTATTTGT------TGTGCTTCAGTTATAAGCCTGTGATGTGAGATTAATATTTGCTACT
CTTGATGGGTGTTCCCCAGTTGATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACTTCTAGCGATTCTTATTGT
TATTTAAAATTTGTTTCCTAGTTTGTTTCAATTATTTGATTCTCATTTGACATTTGGCTGTGGCGTTTAGCTTGTTCTTT
TGTTTGATTCTCCTGTGCTTGAGTTATAAGCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGGTGCTCCCAGTTG
ATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACAACCAGGGATTGTTTTCTTATTATTGTCTAAATCTGTTATA
GTTTGCTTCATTTATGTAAGTAGAGATAGCAAATCATAAAACTGGGATTGGGTCTCTTAATACCTGTTCCTCATGTAACA
TTTGACTTGGCTTTTACCCTGCTCTTTTGTTTGATTCTCCTGTACTTTAGTTATAAGCCTATGATGTGAGATTTATATTT
GCTACTCTTGATGGGTGCTCCCCAGTTGATGATCATAACCACCAAGATCTCTGAGGCCTCCTTATGACAGCCATGGCTTG
TTTTCTTATTGTTCTA-ATTTTGTTAGCTAGTTCGTTTTAGAAAAAAAAGCCAGAATCAGATTGCACATATCGTAATGAT
GTTAGAAAAATGGCCATTGACCACCAAGATCTTGTTGTGCATTTCATAGTTGATAATGGCCATTGACCACCAAGATCTCC
AGCGTGATGTTAGGTTCTTGATTGGGG-ACTGTTTTTAATCCTTGATTTGAGCGCATGCCTTGAAAACATATGTATAC--
-TTGCAACTAGATGTTATTTGGAAAATGGCTCATCACCTTTTTTGTTTAAACTGGCAGGAACTGGAGGAGAAGAGAAAGG
AGAAGGCTAAGGTGTCGTACGACAGGAGGAAGCAACTGGCCAAGCTGCGCGTCAAGGCTGAGAAGGCTGCCGAGGAGAAG
CTGGGTTCTCAGTTGGACATCCTGGCACCAATCAAATACTAG--------------------------------------
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>chr2B_1_TraesCS2B01G281300
CACAAGAGACCACTTGTATTTGTTTGTAGGGTTATTTGAGAGAGACCATATTCACCATGCACCTGTTGCGGATTGATAAA
CCTTAAACCATGAAAATTTGTCGTTATACTACAAAACTCTATGCTTGGTGGTCCAACAGAGTTCACAAGAATAAAGTTAT
GTAGTGGACATCACCCTGTGCGCCCTTCTGGGCTGGCCCATATGCATAGCGGGACGCCTCCATTTTTACATTTTTTTGCT
TTCTTCTTTTCTATTTTCTATTTTTTTTGCTTCTTGTTTTTTATTTTATGTTTTTTACTTCT--TCAAATAATTTGAGGT
TTCCAAAAACTTTCAAATTAATTTTTTGT--------GTGAATTTTGAAACAAAAAATGTTCGAGAAATCATAAAATATT
CATGAATA-AAAAAATATTTATGATTTTGAAAAATGTTCG-GGAAATTGTAAAATTTTCATGATTTTAAAAATATGCTCA
CGAATTTGAG-AAATGTTTGGGATTTCATATAATTTTCATGAACTAGAAATGTTCACAAAAATTCAAAAATGTTTGCGAA
TTTCAAAAAAAA--TGCAAA-GTTTTATAAGTAATCCTGGATTCAAAAAATGTTCACCAAAACAATATAGGTTTTCATGT
ATTTCA-AAAATTATTGCTGAATTTCAAGAAAATATTCGTCAATTCCA-AAATTGTTTGCCGATTCAAAAGAATGTTCAA
GAGTTTCAAAAAATTGTTCACAACATGGGCACGGGACTGACCT--------------------------GCTTTCTAATA
GAGACATGACATAGTGTAAGCCTATTAGGACTTTTTGTGGAGTACAGCCCATTAAAATTTTATTAGGTAACGAGGCCTAT
TGTTCTTTTGAGAGCACTAGCAACCGCCCGGCCCAATCTGCTACCTCCTGGTCGCCTATAAAATCATAAACCCTAACGTC
TTCCTGCGCCCTCCTTCGCCGCCGCCACCCACGACCACCACCGGAGCCGGAGGAAGAGAGGAAGGGAGAAGCCAACA---
GGTAACGATGGTGTCCGGCTCCGGTGTGTCCGCGCGTCGCGTGGTGGTGGATGCGCGCCACCACATGCTGGGTCGCCTTG
CGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTCCGGTGCGAGGAGATGTGCATCTCCGGCGGG
CTGGTCCGTCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGCGGATGAACACCAAGCCCTCGCACGGCCCCATCCACTT
CCGCGCCCCCTCGCGCATTTTCTGGCGCACCGTGCGCGGC----------------------------------------
--------------------------------------------------------------------------------
----------ATGATCCCGCACAAGACGCCCCGCGGCGAGGCTGCGCTCGCCAGGCTCAAGGCGTTCGAGGGCGTCCCGC
CGCCTTACGATCGCACCAAGCGTATGGTCATCCCCGACGCGCTCAAGTACGCGCCTTATCTTTGTTGCTTGCGCTCTAAT
GGCGGATTTAATTAGTTATGTGGTGATGGTCTTTGTCTGACTACTTGTTGGATAGGGTTCTGAGGCTGCAGCCGGGGCAC
AGGTACTGTCTGCTCGGCGAGCTTTCCAAGGAGGTCGGATGGAACTACCATGAAACTATCAAGGTACGTTTTGTTACAAT
CGATCACTCTGGGTGTCACCTCTGAACAAAATGATGAGT-ATGTGATGCATACATATGACTCTTTGGCCCACAATGTTAG
ATTGTGGTGGTTGTCCTGTGGGTTTAGTTTGTAGATGTCAACCAGATTGTTATTGAGAATTTGAGATAATAGCTTCTCAC
TGTGTGGCTAAGTCAAAATTATTTGCTGTCGAGCTGAAACACAGGTTAGGTTAATCGTTGCCATGGAATAAGGCTTTCGA
TAGTGATAGGGTGAAATGCTGAATTGTATAAGCCTATTTTACTGATTTTAACAAAAGGCACTG--TCAAGTTTCCTTTTG
TGCTTAGCCTAGTACCTTCCATCAGTAC---CCTTGTTAAGTGCATTGAGAACTGTTT-TTGTGCCATTTGAATTTGTTG
ATTTTTCACATTGCAA-GTGTGCAAATTTAGCATGACTGGGATGATGCAGAAACTCAGGACTGATGTCCATTGATTTTTC
ACAAAGATGATGCTTACAACCAGCTACTTCTGACTAGTCATGCTATTTTTTTGACAGCAAAAGCTATTTTAATTCGTCTG
TTCCCTCATGTCTGACGATAGACATGTTTTTCTTTTAGCCTGATTCTGATTAATTTTGTCAATGATGATTTCTGATTGAT
CATGGCATTTGTTGCCACATTCCATTGTAAGATTCTCATGTAGTAACATTTGGCTGTGGTTATTATCATGTCCTTTTGTT
GGTTTCTCTTGTGTTTTAATGATATGCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGGTGCTGCCCAGTTGACG
ACTATAACCACCAAGATCTCTGAGGCGTATTTAACAACCAGCGATTCTTATTGTTATTTAAAATTTGTTGGCTAGTTCGT
TTCAATAATTTGAACTCAGATA-CAAATCATAAAACTGCGATTTGGACTTTGGCACCTGTTCCTCATTCAACATTTGTCT
GTGGCTTTTAGCCTGTTCTTTTATTTGT------TGTGCTTCAGTTATAAGCCTGTGATGTGAGATTAATATTTGCTACT
CTTGATGGGTGTTCCCCAGTTGATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACTTCTAGCGATTCTTATTGT
TATTTAAAATTTGTTTCCTAGTTTGTTTCAATTATTTGATTCTCATTTGACATTTGGCTGTGGCGTTTAGCTTGTTCTTT
TGTTTGATTCTCCTGTGCTTGAGTTATAAGCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGGTGCTCCCAGTTG
ATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACAACCAGGGATTGTTTTCTTATTATTGTCTAAATCTGTTATA
GTTTGCTTCATTTATGTAAGTAGAGATAGCAAATCATAAAACTGGGATTGGGTCTCTTAATACCTGTTCCTCATGTAACA
TTTGACTTGGCTTTTACCCTGCTCTTTTGTTTGATTCTCCTGTACTTTAGTTATAAGCCTATGATGTGAGATTTATATTT
GCTACTCTTGATGGGTGCTCCCCAGTTGATGATCATAACCACCAAGATCTCTGAGGCCTCCTTATGACAGCCATGGCTTG
TTTTCTTATTGTTCTA-ATTTTGTTAGCTAGTTCGTTTTAGAAAAAAAAGCCAGAATCAGATTGCACATATCGTAATGAT
GTTAGAAAAATGGCCATTGACCACCAAGATCTTGTTGTGCATTTCATAGTTGATAATGGCCATTGACCACCAAGATCTCC
AGCGTGATGTTAGGTTCTTGATTGGGG-ACTGTTTTTAATCCTTGATTTGAGCGCATGCCTTGAAAACATATGTATAC--
-TTGCAACTAGATGTTATTTGGAAAATGGCTCATCACCTTTTTTGTTTAAACTGGCAGGAACTGGAGGAGAAGAGAAAGG
AGAAGGCTAAGGTGTCGTACGACAGGAGGAAGCAACTGGCCAAGCTGCGCGTCAAGGCTGAGAAGGCTGCCGAGGAGAAG
CTGGGTTCTCAGTTGGACATCCTGGCACCAATCAAATACTAGTGTGCCCCGCAGTCATGCATCGTCTGTTTTGCTGGATA
ATGGTGGTTATTGTTTACGTTATTAGTAGCCTGAGAGTGTCGTTGAGATTTGAAACCTCTGAATATCTATACTCTTCCAA
TCTTTGTAGCAAATGGATTGTTTGGTATTGTTGTTTTCGCCCCATGAGATTTCCTAGATGTTGCTGTTTTCTC---CCAT
CATGTTTTTGTTGTCGCCAGGAATTTACG---CTTCTAGATCCAGCTCTCACGCAAGTCAAGCGTGCAAGCTAGTTAAAG
CACA-TTGATCCGCTGAGTCTCGGCGTGATATAAATTGAAGAAGAGGCAAACTGAGATTATCGAACGGGAAGTAAACATG
GCGGAGGCTTGCGCCAAACAC---------------CTCCCCAGCGCTGCTACCCTTAGAGGAGTGCTGGTCAATAGCAA
CATTA---------------CATACCGGTTCAGGTGTTTGCTAACATTGC----------AGTTTAAGCAAAGGCGAGGT
TTTCTCTGCCTATTTCGCTGGTTACAGAGGATCTAACACCTCACCATCATGCGATCCGACAGTTTCTGGACATCCAAATC
GA----------------------------------------AACATTTGGGCCATCAGAATATCTTCTATTTCCACGTT
GGAATTTTTAGTTTAAACCGATGGCGAGCTGCATTCCAGAAA-------------------------------TTGGTAG
GTTGCATCTATTTTGGGGTCTTTTCATATGTGACTCAGTTGGACTTGACTGAGTAAATGTATGCCAAAAACGCATGTTTG
GCTACCGTAGCTACCGTTGACTTGCTTGCGCTCTGGGTGAGAACCTAGACCCAGTTTCCCGGTTCGGACGATGGCGGCGC
TAGTGTCGCTCTCCCTCATGGGGGCATCGTTTTTGGAGCAGCTGCCGGATGGGGAAGACAAAAGGTGGAGCGGTGTTTCA
TTTACCGCATCGAAGACGACGGATCTCGGTGGCATGGCGCAGCAGGGTCTTGGCGGCAGAGGTGTGATGATGGACGCGCA
GGGAGGTGGTGTTGTTTGGCACTGTGGTAGCGTCGACGCC
>chr2A_7
------AGACCACTTGTATTTGACTGAATGGTTGTTTGAGACAAACCATCTTCCCCATGCATCTCTTGTGGATTGATAAA
CCTTAAACCATGGAAATTTGCCGCTGTACTACAAAACTTTGTGCTTGGTGGCCCAACAGAGTCTACAAG-ATAAGGTTAT
GTAATAGACATCACCCCGTGCGCCCTTCTGGGCCGGCCCATATGCGCAACGGGATGCCTCCTGTTTTTTTTG--------
-----CTTTTCTATTTTATTTCTTTGCTTCTTGT--TTTTTTATTTTATGTTTTTGTTTACTTCTTTAAGAATTCAAGGT
TTCCAAAAACTTCCAT-----TTTTTTTT--------GTGAATTTTGAATTTTTTC-----CGAGAAATCATAAAATATT
CATGAATACAAAAAATATTTATGATTTTGAAAGATGTTCG-GAAATCA-TAAAATGTTCATGATTTTCAAAAAATGCTCG
CAAATTTGGAAAAAAGTTTGGGATTTCATATAATGTTCATGAACTAAAAATGTTCAAAAAAATTAAAAAATGTTTGCGAA
TTTCAAAAACTGTTTGCAAA-ATTTTAAAAATAATCATGGATTCAAAAAAAGTTCATGCATTCAATACATTTTTTCATCA
AAACAATAAAATTATTCCTGAATTTAAAGAAAATGTTACTCGATTCCA-AAAATGTTTGCCGATTCAAAAAAATGTTCAA
-AGTTTCAAAAATTTGTTCACAACATGCGCACGGGACTGACCCGCTTTC-------------------------------
------TGACATAGTGTAAGCCTATTAGGACTTTTTGTGGAGTACAGCCCATTAAGAGTTTATTAGGTAACGAGGCCTAT
TGTTCTTTTGAGAGCACTAGCAACCGCCTGGCCCAATCTGCTACCTCCTGGTCGCCTATAAAATCATAAACCCTAACGTC
TTACTGCTCCCTCCTTCGCCGCCGCCACCCACGACCAGCACCGGAGCCGGAGGAAGAGAGGAAGGGAGAAGCCAACAACA
GGTAACGATGGTGTCTGGCTCCGGTGTGTCCGCGCGTCGCGTGGTGGTGGATGCGCGCCACCACATGCTGGGTCGCCTTG
CGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTCCGGTGCGAGGAGATGTGCATCTCCGGCGGG
CTGGTCCGTCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGCGGATGAACACCAAGCCCTCGCACGGCCCCATCCACTT
CCGCGCTCCCTCGCGCATTTTCTGGCGCACCGTGCGCGGC----------------------------------------
--------------------------------------------------------------------------------
----------ATGATCCCGCACAAGACGCCCCGCGGCGAGGCCGCACTCGCCAGGCTCAAGGCTTTCGAGGGCGTCCCGC
CGCCTTACGATCGCACCAAGCGTATGGTCATTCCCGACGCGCTAAAGTACGCGCCTTATATTTCTTGCTTGCACTCTAAT
GGCGGATTTAGTTAGTTATGTGGTGATGATCTTTGTGTGACTTGTTGTTGGATAGGGTTCTGAGGCTGCAGCCGGGGCAC
AGGTTCTGTCTGCTCGGCGAGCTTTCCAAGGAGGTCGGATGGAACTACCATGAAACTATCAAGGTACGTTTTGTTACA-T
CGATCACTCTGGTTGTCACCTCTGAACAAAAATGATGATGATGTGATGCATACATATGATTCTTTGGCTCACAATGTTAG
ATGTA----GTTGTCCTGTGGGTTTAGTTTGTAGATATCAACCAGATTTTTATTGAGAATTTTAGATGATAGCTTCTCAC
TGTGTGGCTAAGTCAAAATTAATTGCTGTCGAGCTGAAACACAGGTTAGGTTATGGGTCGACATGAAATAAGGTTTTGGA
TAGTGATAGAGTGAAATGCTGAATTGTGTAAGCCTATTTTACTGATTTTAACAAAAGGCACTG--TCAAGTTTCCTTTTG
TGCTTAGCTTAGTAGCTTCCATCAGTTCCTTCCTTGTTAAGTGCATTGAGAACT-TTT-TTGTGCCATTTGAATTTGTTG
ATTTTTTACATTGTAA---GTGCAAATTTAGCATGACTGGGATGATGCAGAAACTCAGGACTGATGTCCATTGATTTTTC
ACAAAGATGATGCTTACAACCAGCTACTTCTGACTATTCATGCTAATTTTTTGACAGCAAAAGCTATTTTAATTCGCCTG
TTCCCTCGTGCCTGAT----GATATTTTTATCTTTTAGACCGATTTTGATTAATTTTGTCAATGATGATTTCTGATTGAT
CATGGCATTTGTTGCCACACTCCATTGTAAGATTCTCATGTAGTAACATCTGGCTGTGGTTATCATCATGTTCTTTTGTT
GGTTTCTCTTGTGTTT--------------------------------------------------------AGTTGACG
ACCATAACCACCAAGATCTCTGAGGCGTATCTAACAACCAGCAATTCTTATTGTTATTTAAAATTTGTTGTCTAGTTCGT
CTCAATTATTTGAACTCAGATATCAAATCATAAAACTGCGATTGGGACTTCGGCACCTGTTTCTCATTCAACATTTGGCT
GTGGCTTTTAGCCTGTTCTTTTATTTGATTCTCCTGTGCTTCAGTTATAAGCCTGTGATGTGAGATTAATGTTTGCTACT
CTTGATGGGCGTTCCCCAGTTGATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACTTCCAGGGATTCTTATTGT
TATTTAAAATTTGTTTGCTAATTTGTTTCAATTATTTGATTCTCATTTAACATTTGGATGTGGTGTTTAGCTTGTTCTTT
TGTTTGATTCTCCTGTGCTTGAGTTATAATCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGATGCTCCCAGTTG
ATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACAACCAGGGATTGTTTTCTTATTATTGTTTAAATCTGTTATA
GTTTGCTTCAATTATTTAAGTA-AGACAGCAAATCATAAAACTGGGATTGGGTCTCATAATACCTGTTCCTCATGT-ACA
TTTGACTTGGCTTTTACCCTGTTCTTTTGTTTGATTCTCCTGTGCTTTAGTTGTAAGCATATGATGTGAGATCTATATTT
GCTACTCTTGATGGGTGCTCCCCAGTTGATGATCGTAACCACCAAGATCTCTGAGGCCTCCT-ATGACAGCCATGGCTTG
TTTTCTTATTGTTTTTTATTTTGTTAGCTAGATCGTTTTAGAAAAAAAAATCAAAATCAGATTGCACATATCGTAATGAT
GTTAGATAAATGTGCGCTGC---------TCTTGTTGAGCATTTCAATAGT--TAATGGCCATTGACCAGCAAGATCTCC
AGCGCCATGTTAGGTTCTTGATTGGGG-ACTGTTTTTAATTCTTTATTTGAGCGCATGCCTTGAAAACATAGGCATACCT
GCTGCAACTAGATGTTATTTGGAAAATGGCTCATCACCTCTTTTGTTTAAACTGGCAGGAACTGGAGGAGAAGAGGAAGG
AGAAGGCAAAGGTGTCGTATGACAGGAGGAAGCAACTGGCCAAGCTGCGCTTCAAGGCTGAGAAGGCTGCCGAGGAGAAG
CTGGGTTCTCAGTTGGATATCCTGGCACCAATCAAATACTAGTGTGCCGCCCAGTCATGCATGGTCTGTTTTGCTGGATA
ATGGTGGTTATTGCTTACG---TTAGTAGCCTGAGAGTGTCGTTGAGATTTGAAACCTCTGAGTATCTATACTATTCCAA
TCTTTGTAGCAAATGGATTGTTTGGTATTGTTGTTTTCGCCCCATGAGATTTCAAAGATG----TGTTTTCTC---CCAT
CATGTTTTTGTTGTCGCCAGAAACTTATGACCCTTCTAGATCCAGCTCTCACACAAATCAAGCGTGCAAGCGAGTTAAAG
AACA-TTGATCCGCG-----------------------------------------------------------------
----------------------------------------------------------------------------GCAA
CATTATTGTTTATCTTCACCCATACCGGTTCAGGTGTTTGCCAACATTGCCCAGCACTGCAGTTTAAGCAAAGACGAGGT
TTTCTCTGCCCATTTCACTGGTTACAGAGGATCGAACACCTCACCATCATGCGATCCAACGGTTTCTGGACATCCAAATC
GAGTACATTATGGAGATAATCGTACACAGATC------------------GGCCATCAGAATATCTTTTATTTCCACGTT
AGGATTTTTAGTTTAAACCGATGGCGAGCTGTCCAGAAACTCTGCGCATGCGAGCGATGCATCAAGGGCATGCTTGGTAG
GTTGCATCCTTTTTTTGGTCTTTTTATCTGTGACTCAGTTGGACCTAACTGAGTAAATGTATGCCAAAAACGCATGCTTG
--------------------------------------------------------------------------------
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----------------------------------------
>chr2D_146
--------------------------------------------------------------------------------
-----------------------------------------------------------------CAAGAATAAAGTTGT
GTAGTAGACATCACCCCCTGCGTCCCTCTGTGCCGACCCATATGGGCAAAGGGACGCCTCCTAATTTACATTTTTTTGCT
TTTCTGTTTTCTATTTTATA----TTTTGCTTCTTGTTTTTTCTTTTATTTTCA-TACTTCT--TTAAATAATTCAAAGT
TTCCAAAATCTTCCAA-----TTTCTTTTTTTAAAATGTGAATTTTG---TTTTTT-----TGAGAAATCATAAAATATT
CATGAATACAAAAAAG-TTTATGGTTTTGAAAAATGTTTGAGAAATCA-TAAAATGTTCATGGTTTTAAAAAA-TGCTCA
TGAATTT-GAAAAATGTTTGGGGTTTCATATAGTGTTCATGAATTAAAAAATGTTCACAAAATTCAAAAATGTTTGTGAA
TTTCAAAAACTGTTTGCAATTGTTTTAAAAAAAATCATGGATTCAAAAAATGTTCATGCATTCAATAAAATG--TCATCA
AAACAATGAAAGTTTTCATGTATTTCAAAAATTATTTCTGAATTTCAAGAAAATGTTTGCCTATTCAAAAAAATGTTCAA
GAGTTCC-AAAAATTGTTCACAACATGCGCATGGGACTGACCCGCTTTTTTTTTAGATGAGACTGACCCGCTTTCTAATA
GAGACATGACATAGTGTAAGCCTATTAGGACTTTTTGTGGAGTACAGCCCATTAAAATTTTATTAGGCAATGAGGCCTAT
TGTTCTTTTGAGAGCACTAGCAACCGCCCGGCCCAATCTGCTACCTCCTGGTCGCCTATAAATTCATAAACCCTAACGTC
TTCCTGCTCCCTCCTTCGCCGCCGCCAGCCACGACCACCACCGGAGCCGGAGGAAGAGAGGAAGGGAGAAGCCAACA---
GGTAACGATGGTGTCCGGCTCCGGTGTGTCCGCGCGTCGCGTGGTGGTGGATGCGCGCCACCACATGCTGGGTCGCCTTG
CGTCGATCGTGGCCAAGGAGCTGCTCAACGGGCAGCGCGTAGTGGTTGTCCGGTGCGAGGAGATGTGCATCTCCGGCGGA
CTGGTCCGTCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGCGGATGAACACCAAGCCCTCGCACGGCCCCATCCACTT
CCGCGCCCCCTCGCGCATTTTCTGGCGCACCGTGCGCGGC----------------------------------------
--------------------------------------------------------------------------------
----------ATGATCCCGCACAAGACGCCCCGCGGCGAGGCCGCGCTCGCCAGGCTCAAGGCTTTCGAGGGCGTCCCGC
CGCCTTACGATCGCACCAAGCGTATGGTCATCCCCGACGCGCTCAAGTACGCGCCTTATCTTTCTTGCTTGCTCTCTAAT
GGCGGATTTAATTAGTTATGTGGTGATGATCTTTGTCTGACTTCTTGTTCGATAGGGTTCTGAGGCTGCAGCCGGGGCAC
AGGTTCTGTCTGCTCGGCGAGCTTTCCAAGGAGGTCGGATGGAACTACCATGAAACTATCAAGGTACGTTTTGTTACA-T
CGACCACTCTGGTTGTCACCTCTGAACAAAAATGATGATGACGTGATGCATACATATGATTCTTTGGCTCACAGTGTTAG
ATGTA----GTTGTCCTATGGGTTTAGTTTGTAGATGTCAACCAGATTTGTATTGAGAATTTTAGATGATAGCTTCTCAC
TGTGTGGCTAGGTCAAAATTAATTGCTGTCGAGCTGAAACACAGATTAGGTTATCGGTCGCCATGAAATAAGGTTTTCGA
TAGTGATAGGGTGAAATGCTGAATTGTGTACGCCTATGTTACTGATTTTGACAAAAAGGCAGTGTTCATGTTTCCTTTTG
TTCTCAGCCTAGTAGATTCCATCAGTTC---CCTTGTTAAGTGCATTGAGAACT-TTTGTTGTGCCATTTGAATTTGTTG
ATTTTTTGCCATTGTACGTGTGCAAATTTAGCATGACTGGGATGATGCAGAAACTCAGGACTGATGTCCATTGATTTTTC
ATAAAGATGATGCTCACAACCAGCTACTTCTGACTAGTCATGCTATTTTGTTGACAGCAAAAACTATTTTAATTCTTCTG
TTCCCTCGTGTCCAATGATAGACATGTTTTTCTTTTAGCCTGATTCTGATTAATTTTATCGATGATGATTTCTGATTAAT
CATGGCATTCGTCGCCACATTCCATTGTAAGATTCTCATGTAGTAACATTTGGCTGTGGTTATCATCATGTTCTTTTGTT
GGTCTCTCTTGTGTTTTAATGATATGCCTATGATGTTATTATAATAATTGCTACTCTTGATGGGTGCTCCCCAATTGAC-
-CCATAACCACCAAGATCGCTGCGGACTATTTATTTT----------------TTATTTAAAATTTCTTGGCTAGTTCGT
TTCAATTATTTGAACTC-GATATCTAATCATAAA------------ACTTTGGCACCTGTTTCTCATTCAACATCTGGCT
GTGGCTTTTAGCC-------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------TGCTCTTT
TATTTGATTCTCCCGTGCTTCAGTTATAAGCCTATGATGTGAGATTAATATTTGCTACTCTTGATGGGTGCTCCCAGTTG
ATGACCATAATCACCAAGATCTCTGAGGCCTCTTTTAACAACCAGGGATTGTTTTCTTATTATTGTTTAAATCTGTTATA
GTTTGCTTCAATTATGTAGTAA-AGATAGCAAATCATAGAACTGGGATTGGGTCTCTTAATGCCTGTTTCT-ATGTAACA
TTTGACTTGGCTTTTACCCTGTTCTTTTGTTTGATTCTCCTGTGCTTTAGTTATAAGCCTATGATGTGAGATTTATATTT
GCTACTCTTGATGGGTGCTCCCCAGTTGATGATCATAACCACCAAGATCTCTGAGGCCTCCT-ATGACAGCCATGGCTTG
TTTTCTTATTGTTCTA-ACTTTGTTAGCTAGTTCGTTTTAGAAA--AAAATCAAAATCAGTTTGCACATATCGTAATGAT
GTTAGAAAAATGTGCGCTGC---------TCTTGTTGCACATTTCAATAGT--TAATGGCCATTGACCACCAAGATCTCC
AGCGCGATGTTAGGTTCTTGATTGGGGGACTGTTTTTAATTCTTGATTTGAGCGCATGCCTTGAAAACGTATGTATAT--
-CTGCAACTAGATGTTATTTGGAAAATGACTCATCACCTCTTTTGTTTAAACTGGCAGGAACTGGAGGAGAAGAGGAAGG
AGAAGGCCAAGCTGTCGTACGACAGGAAGAAGCAACTGGCCAAGCTGCGCATCAAGGCTGAGAATGCTGCCGAGGAGAAG
CTGGGTTCTCAGTTGGACATCCTGGCACCAATCAAATACTAGTGTGCCGCGCAGTCATGCATCATCTGTTTTGCTGGATA
ATGGTGGTTATTGTTTACG---TTAGTAGCCTGAGAGTGTCGTTGAGATTTGAAACCTCTGAGTATCTATACTATTCCAA
TCTTTGTAGCAAATGGATTGTTTGGTATTGTTGTTTTCGCCCCATGAGATTTCAAAGATG----TTGCTGTTTTCTCCAT
CATGTTTTTGTTGTCGTCAGGAACTTAGGACG------------GCTCTCGCACAAGTCAAGCGTGCAAGCGAGTTAAAG
CACATTTGATCCGCTGAGTCTCAGCGTGATATAAACTGAAAAAGAGGCAAACTGAGATTATCGAACGTGAAGTAAACATG
TCGGAGGTTTGCGCCAAACACAAGAAAAGCTCACACCTCCCCAGCGCTGCTACCCTTCGAGGAGTCCCGGTCAATAGCAA
CGTTATTGTTTATCTTCACCCATACCGGTTCAGGTGTTTGCCAACAATGCCCAGCACGGCAGTTTAAGCAAAGACGAGGT
TTTCTCTGCCCATTTCACTAG-TACAGAGGATCGAACACCTCACCATCATGCGATCCAACGGTTTCTGGACATCCAAATC
GAGTACATTATGGAGATAATCGTACACAGATCCCTGTCGCTGAACATTTGGGCCATCAGAATATCTTCTATTTCCACGTT
GGGATTTTTAGTTTAAACCGATGGCGAGCTGCATTCCAGAAA--------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------
>chr5A_1000
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------GATGGTGTCCGGCTCCGGCGTGTGCGCCAAGCGCGTGGTGGTGGACGCCCGCCACCACATGCTCGGCCGCCTGG
CCTCGATCGTCGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTCCGCTGCGAGGAGATCTGCATGTCCGGCGGC
CTCGTCCGCCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGCGGATGAACACCAAGCCCTCCCACGGCCCCATCCACTT
CCGCGCCCCGGCCAAGATCCTCTGGCGCACCATCCGCGGGTACGTCGCCGGCGACG---------CCGCCGCCGCCTAGA
TCCGTCC----------------------CCGTATCCATTTGGGTTTGCGTGTA-CTGATGATGCCGTG--TTTGGTGGC
GCTCTGCAGTATGATTCCGCACAAGACCGCGAGGGGCGAGGCCGCGCTCGCCAGGCTCAAGGCGTACGAGGGCGTCCCGC
CGCCGTACGACAGGACCAAGCGCATGGTCATCCCCGACGCGCTCAAGTACGCCGGCCTTCGACTGCCTTCTAGATCTTGG
CGTGCGTCTTG-----TATGTGTGTTTGATGTTGACGTGGCTTGTGGTTTTGCAGGGTTCTGAGGCTGCAGCCTGGGCAC
AGGTACTGCCTCCTCGGCCAGCTCTCCAAGGAGGTCGGATGGAACTAC--------------------------------
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>chr5D_1000
--------------------------------------------------------------------------------
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------GATGGTGTCCGGCTCCGGCGTGTGCGCCAAGCGCGTGGTGGTGGACGCCCGCCACCACATGCTCGGCCGCCTGG
CGTCGATCGTCGCCAAGGAGCTGCTAAACGGGCAGCGTGTGGTGGTGGTCCGCTGCGAGGAGATCTGCATGTCCGGCGGC
CTCGTCCGCCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGAGGATGAACACCAAGCCCTCCCACGGCCCCATCCACTT
CCGCGCCCCCGCCAAGATCCTCTGGCGCACCATCCGCGGGTACGTCTC------CGGCGACGCCGCCGCGGCCGCCTAGA
TCCGTCGCCTCGCCTATGCACGTGCGTCGCCGTGTCCATTTGGGTTTGTGCGTTTCTGACGATGTCGTG--TTTGGTGGC
GCTCTGCAGTATGATTCCGCACAAGACCGCGAGGGGCGAGGCCGCGCTCGCCAGGCTCAAGGCGTACGAGGGCGTGCCGC
CGCCGTACGACAGGACCAAGCGCATGGTCATCCCCGACGCGCTCAAGTACGTCGTTGTTCGACTGTCTTCTAGATCTCGG
CGTGCGTCTTG-----TATGTGTGTTTGATGTTGACGTGTCGTGTGGTTTTGCAGGGTTCTGAGGCTGCAGCCTGGGCAC
AGGTACTGCCTCCTCGGCCAGCTCTCCAAGGAGGTCGGATGGAACTAC--------------------------------
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----------------------------------------
>chr5B_1000
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------GATGGTGTCCGGCTCCGGCGTGTGCGCCAAGCGCGTGGTGGTGGACGCCCGCCACCACATGCTCGGCCGCCTGG
CCTCGATCGTCGCCAAGGAGCTGCTCAACGGGCAGCGCGTGGTGGTGGTCCGATGCGAGGAGATCTGCATGTCCGGCGGC
CTCGTCCGCCAGAAGATGAAGTACCTCCGCTTCCTCCGCAAGAGGATGAACACCAAGCCCTCCCACGGCCCCATCCACTT
CCGCGCCCCGGCCAAGATCCTCTGGCGCACCATCCGCGGGTACGTCTC------CG---------CCGCCGCCGCCTAGA
TCCGTCGCCTCGCCTATGCACGTGCGTCGCCGTGTCCATTTGGGTTTGTGTGTT-CTGATGGTGCCGTGTTTTTGGTGGC
GCTCTGCAGTATGATTCCGCACAAGACCGCGAGGGGCGAGGCCGCGCTCGCCAGGCTCAAGGCGTACGAGGGCGTGCCGC
CGCCGTACGACAGGACCAAGCGCATGGTCATCCCCGACGCGCTCAAGTACGTCGGCGTTCGACTGCCTTCTAGATCTCTG
CGTGCGTCGTG-----TATGTGTGTTTGATGTTGACGTGGCTTGTGGTTTTGCAGGGTTCTGAGGCTGCAGCCTGGGCAC
AGGTACTGCCTCCTCGGCCAGCTCTCCAAGGAGGTCGGATGGAACTAC--------------------------------
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----------------------------------------
>SNPs
SSSSSS----------------SS--S-S----S-------S-S-----S---S-------S--S---S-----------
------------S-------S--S-S------------S-S----------S----------SS----------------
-----S----------S----------------S-----------SS-S------------SS-----------------
--SS-------------S---S-------------------------------------------S--------SS----
------------S---SSSSS------S---------------------SSSSSSSSSSSS-------------------
------------------------------------------S--SSSS------S----------------S-------
--------SS------------------------S-----------S---------S-----------------------
---------SSS---------------S--S-----S-------------------SSS-SS-----S-SS-------SS
-SSSS-----------S-----------------S---S-------------S-----------------S---------
---------------------------S--------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S-------------------------------------
---------------------------------------------------------------S----------------
----------------------------S-------------S-------------------------------------
------------------------------------------------------------------------------S-
------------S------------------SSSSSSS---------------------S--------S-----------
--SSSSSSS---------------------------------------S-------------S----S------------
---------------------S-------------------------------SSS--S------S-------S------
---------------------------S----------------------------------------------------
--------------S-----------S---------------------------S-------------------------
------S------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-------S----------------------------------------------------------------
---------------------------------------------------------------S-------S--------
------------------------------------S-SSS-----S---------------------S-----------
--S---------------------------------------S-------------------------------------
------S------------------------------------S-----------------S---------------S--
---------------------------S------------------------------------------S---------
---------S------------------------------------------------------S--S------------
----------------S---S---------------------------S--------S-----S----------------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
----------S-----------S---------------------------------------------------------
---------------------S---------------------S------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------SS--S--------------------------
------------SS-SS--SSSSSSSSSS--------S--------SSSS-SS---------------------------
----S-----------------------------------S---------------------------------------
-S-------------------------------------S-----------------------------------S----
-------S------------------------------------------S-----------------------------
------------------------------------------------S-------------------------------
-------------------SSS----------------------------------------S----------S------
-----------------------------------------------------SS-----SSSS----------------
-----------------------S---S------------------------S------------------S--------
----------------------S------------S----S--------------------------S------------
S------S-------------------------------------------------S-------S-S------------
-----------------------------------------S-------------------------------S------
----------S-----S----------------S-----------------------S--S-------------------
--------------------------------------------------------------------------------
--S-----------------------------------------------------------------------------
--------SS----SS--------S--S----------------S-S-----------------------------S---
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_968
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--------------------------------------------------------------------AACCCTAACGTC
TTCCTGCG------------------------------------------------------------------------
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>reverse_2929
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------------------------------------------------GACATTTGGCTGTGGCGTTT------------
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----------------------------------------
>forward_2549
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------------------------------------------------TGCTACTCTTGATGGGTGCTG-----------
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----------------------------------------
>reverse_4650
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---------GCTACCGTTGACTTGCTTGC---------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------
