>input_sequence_30219
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-----------------------------------------------------------------------CGACGACCG
-----TCCTCTCCTCTCCGTCTCTTCTTCCCCACGCTGCCCTCGCTTTCCAGCCACGCAACGATCCAC--GCCTCGCTCC
CGGCCCCGCGCCTCCGCCGTCCTCGCTCGCCCCGCCGACTCCGGCCGAATCCGCCGGCCCGCTCCCGCCGGCAGTTGAAG
CGCAGATCGGACAGGTGCGTCTCCTTCCGCTGCGGGCGAATCTAACAGCCCCCCCTTGC---------------------
--------------------------------------------------------------------------------
------------------------------------------------GTCTGAGTAGCGCGCCGAACGGCGGAAATTGC
TCGGGGACGAAGCATCTAGCGTGTTTGTGTTCGTGGTGGCTGAAAATTATTCCGCGAGGCGCTAGTTGTTGGGGGGA-AG
AACTCGGGGAATTGCTGATTTCGGCGGGCCTGTACTATTTGTTTGTTTATCTT--GTATAAATTCAGTCTTCAGGGGAAT
CAGTCCTTTCCACCACCACCAGCTGAAAT---------TAATTACTAGTAGTAAAAAGAAAGTGTTCATCCTGGCATAC-
-----------------------CTTGCTTACCTTTTGGTCACATTAAAATGTAAGATTTGCCTACAAGGTACATAATAA
TAAGCTGAAAAAAGGATACTAAAACCTGCACGCTCAATAACATCTTAAGGATTTTGCTACAATAGGTGAAATATACATGG
CGCCATGACTGATTGAAATAGCCAGTG---TGTTAGCTGCTCCTACTGCAGGACTTGTTGCTGCTTTTCCAGCAGATTGC
ACTTCCCGTGAATATCTTCGGTTTTCACATGTCCAAAGAAAAATCCCATGATCAACAAAATTGTCAATACGCTGTTAAGA
CGCAAATCTTA----------GATAATGATCTGACAA-------------------------------------CGCGTC
GAGTAGTGAAGATTGTTTGAGATAGGTATAAGCATGTTATCCCCCTTGGCTGATGATTCTAGGCATATC----TCTCTGA
TGCAGGCTTGCAAGCATGTATATTCGAGTCAAGCGGAACAAGACCACCTACTTCATACAGTGTGATCCAACAGAGACAAT
TTTGAATATCAAACAGAAGTTGCAGTCAATAACGGACCACCCTCCTAATAACCAGAGGTTGATCTTGTTGGCTACCAACA
ATATATTGGATGACTCCAAGACGCTGGCTGATCAAAAGGTACCAATATATGTTAGTTATCGGCAAGCACATTTGCCTACT
GTTGACAGAGGAAATTATGTTCTGTAGGCATGGTACAATTTGATTTGTGTAGCCTTAGTTTATTAATT----TTATTTCC
AGATCAAAGCCACCATTCAGCTTAACCCATTT-TTTACTTCCATGAGTTA-AATTGATTTTGATACTTGTGCAGGTGGAG
AATGACGCCGTTGTTGCATTGGCATTGAGAAAAGGTTCTGTTCTATTATCACCTGGCATGATGTTTGACACTTGCGTACT
CAGTGTTTAACTTGTCTG----TTTTGAGCTATTGATTTGTGTTCCTTCTGTTCTGATGCTGAGTTGTGACCTGTCATAA
TTTTCATTTTTGTAGCAATGGTTGTTGCCACCAGCAGCTTCTTTTGTAGAAAGTGGCTTTATCAAGAATGATCCTTTTTA
TTATTTTTCTGCAGTACATCATA-GGTCATCATTCTCCAATAACTAGCAAAACCTGTTTTACAAAACTGTCGGTGCAACA
AATTGAATTTTTACATCCTTCTTGCTCTCTATTAACTTGTGGTTCATTTCCTTCACTGTAATAAATGTATAAAAGCATTA
AAGCTGAAATGCAACCTGAAGGACATTTGC-AGTTGTCTGCCTGTAAATACCATGCCGGAGCAAAGCAAATGACAACTTT
TTTGTACTATGCCATGGTGGTTACAGACTACAGTGCATAGATTCATGTTCTCTCTAGAACAATGCCATGTGCCTAATTCT
AATTTACTCTTGAAAAGGATGGTGATTTGTAATTCTA------ACCAAGCTTTACTAGTTCTGTCGTTTGTCCGTTACTC
CTCTATAGCTGCTGCGTTTTTCAAACTTGCTGACTTTGTAACATTCCGTTTCCTTTCACCAGATAACGAGTTCGAGGAGG
TGTCCATCGCCGACCCGAGCGATTTCATGGCGTCCTCATGAGGCCGGCCGGCCGGCCCGCCGTCCCCCCCTACCCAACCC
ATGCAAGGACGGAGCGCTGTCAGCGGCTTCCCCGAAGCAGATCATG----------------------------------
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------------------------------------------------------TTGCTTGCTTGCTGCTCTAGCCTCTA
GCCTCTAGGATGTTGCTCGCTTGTGTGATTGTGTCCTTGCTATTAAAGACCCTAAACAACCGTTGGGGATGGCATTTAGT
TTG-GATTTGGACATTCCAGCCGATAC-------GTGTGCTCCCACCACCCACCGGGGCGTGTCCTGGCGCTCTGACCTA
CCCGTCTTTTGTACCGGCGCGTGAATGAACACGGGCATGGGTGGCGAGATCCGTTGGTGGTGACCGGTGATTGGGAT---
--CCCACCACCTAATGC--TGTGTCATGCAGGTCCTGTTGTGTTTGCCAGTTGGTGTGTGC---TAGGGACTATATTATC
GGTCTGTTTGCGGGAATTCCAGCTGGTTCGTGTCGAAGGTTATTCTTATCCTTGCCGTTGCTGTTTATGTGGATCTGAGA
TGGTTTTCATGTGGACTCTGGAGCGTGCATTTTCTGGGTTCGGCGCCCGCACTAGTATCCCATTTTCTCTGTCGC-----
--------------------------------------------------ATAATATAAGAGCAACC-------------
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>chr2B_1_TraesCS2B01G167800
ACAGCGCATGTAGCAAGCGTGCCATAGTGAGTGGTGCCATGCCTGGCAAGTTTAACCCGTGGCGTCTATTTCTCGCATTA
AGCGAGACGAACGGGATCTCGCACAATGAGCGGCTACAGTAACAGGCGGGCCCGTTAGCGTATGTTTTCG-GAAAAATGG
AGTAAAAACAGTGCGCTCGATCCTGGGATCT---------TCGATGCACTGCTAACCACTGCATCACGATCAATTTCACG
TACAATACGTAGGGCATGACTTACTAGAAGGGAAAAGAGTCGGGGTTTTCACACTGGTCCATTTTTCTTTTTC-TCTTTT
TACTATGTTTTCTTTTATTTATTTTTCTTCATTTTTATTAGGTTTTCTGTGGGTTTTTTA---TTTTCCCCTTTCTTTTT
TATTTCTCCTTTTTTTCATTCCTTTTCATTATCTTTTCATATGTTTGGT--TTTTTTTGTTTTCTTCTCCATTTTTTTGT
TTGGTTACATTTTTTTCTTCTCCATTTTTTATTTTTTATTTTTTATTTTGTTTGTCTTTTGCTTTCACGGTACATTTTTC
GTATGTGTCAAGTTTTTTTAATAAGTGATCAGCATTTTTTGTATACATGTTTCAAGATTGTTTGAACGCTTATCCAACAT
TTTTTAAATAGTTGTTC-----------------------------TTCAAATAATCATTCAACATTTTTTAATACTTAT
TCAACATTTTC-AAATATTTTTTCAGTATTTTTCAAATACCTGTTCAACGTTTTTAATACTTATTCAACATTTTTAAATA
CTTGTTCAACATT-------------------------------------------------------------------
-------------------------------------------------------------------------------T
TTGTAATACCTATTCAAGAC-TTTTTGAAATTATTGTTCAAGATAATAAAGAAAATTACAAAAA--TAAAGC--AAAAAT
CCAGAACAGACAACAAAGAATAAAAATAAATA----GGCCGTGGCCTCCCGCGAGTATGGGCCGGCCCATCTGGGGCTC-
---------------------------------------------------------------------CCCAGGACGGG
CCGTGCTGGCCCATCTGTCCAGGTTTGATCTGCGGCCCACCATTGACGGCCCGCTGAATGAACGGCGGCAGCGACGACCG
-----TCCTCTCCTCTCCGTCTCTTCTTCCCCACGCTGCCCTCGCTTTCCAGCCACGCAACGATCCAC--GCCTCGCTCC
CGGCCCCGCGCCTCCGCCGTCCTCGCTCGCCCCGCCGACTCCGGCCGAATCCGCCGGCCCGCTCCCGCCGGCAGTTGAAG
CGCAGATCGGACAGGTGCGTCTCCTTCCGCTGCGGGCGAATCTAACAGCCCCCCCTTGC---------------------
--------------------------------------------------------------------------------
------------------------------------------------GTCTGAGTAGCGCGCCGAACGGCGGAAATTGC
TCGGGGACGAAGCATCTAGCGTGTTTGTGTTCGTGGTGGCTGAAAATTATTCCGCGAGGCGCTAGTTGTTGGGGGGA-AG
AACTCGGGGAATTGCTGATTTCGGCGGGCCTGTACTATTTGTTTGTTTATCTT--GTATAAATTCAGTCTTCAGGGGAAT
CAGTCCTTTCCACCACCACCAGCTGAAAT---------TAATTACTAGTAGTAAAAAGAAAGTGTTCATCCTGGCATAC-
-----------------------CTTGCTTACCTTTTGGTCACATTAAAATGTAAGATTTGCCTACAAGGTACATAATAA
TAAGCTGAAAAAAGGATACTAAAACCTGCACGCTCAATAACATCTTAAGGATTTTGCTACAATAGGTGAAATATACATGG
CGCCATGACTGATTGAAATAGCCAGTG---TGTTAGCTGCTCCTACTGCAGGACTTGTTGCTGCTTTTCCAGCAGATTGC
ACTTCCCGTGAATATCTTCGGTTTTCACATGTCCAAAGAAAAATCCCATGATCAACAAAATTGTCAATACGCTGTTAAGA
CGCAAATCTTA----------GATAATGATCTGACAA-------------------------------------CGCGTC
GAGTAGTGAAGATTGTTTGAGATAGGTATAAGCATGTTATCCCCCTTGGCTGATGATTCTAGGCATATC----TCTCTGA
TGCAGGCTTGCAAGCATGTATATTCGAGTCAAGCGGAACAAGACCACCTACTTCATACAGTGTGATCCAACAGAGACAAT
TTTGAATATCAAACAGAAGTTGCAGTCAATAACGGACCACCCTCCTAATAACCAGAGGTTGATCTTGTTGGCTACCAACA
ATATATTGGATGACTCCAAGACGCTGGCTGATCAAAAGGTACCAATATATGTTAGTTATCGGCAAGCACATTTGCCTACT
GTTGACAGAGGAAATTATGTTCTGTAGGCATGGTACAATTTGATTTGTGTAGCCTTAGTTTATTAATT----TTATTTCC
AGATCAAAGCCACCATTCAGCTTAACCCATTT-TTTACTTCCATGAGTTA-AATTGATTTTGATACTTGTGCAGGTGGAG
AATGACGCCGTTGTTGCATTGGCATTGAGAAAAGGTTCTGTTCTATTATCACCTGGCATGATGTTTGACACTTGCGTACT
CAGTGTTTAACTTGTCTG----TTTTGAGCTATTGATTTGTGTTCCTTCTGTTCTGATGCTGAGTTGTGACCTGTCATAA
TTTTCATTTTTGTAGCAATGGTTGTTGCCACCAGCAGCTTCTTTTGTAGAAAGTGGCTTTATCAAGAATGATCCTTTTTA
TTATTTTTCTGCAGTACATCATA-GGTCATCATTCTCCAATAACTAGCAAAACCTGTTTTACAAAACTGTCGGTGCAACA
AATTGAATTTTTACATCCTTCTTGCTCTCTATTAACTTGTGGTTCATTTCCTTCACTGTAATAAATGTATAAAAGCATTA
AAGCTGAAATGCAACCTGAAGGACATTTGC-AGTTGTCTGCCTGTAAATACCATGCCGGAGCAAAGCAAATGACAACTTT
TTTGTACTATGCCATGGTGGTTACAGACTACAGTGCATAGATTCATGTTCTCTCTAGAACAATGCCATGTGCCTAATTCT
AATTTACTCTTGAAAAGGATGGTGATTTGTAATTCTA------ACCAAGCTTTACTAGTTCTGTCGTTTGTCCGTTACTC
CTCTATAGCTGCTGCGTTTTTCAAACTTGCTGACTTTGTAACATTCCGTTTCCTTTCACCAGATAACGAGTTCGAGGAGG
TGTCCATCGCCGACCCGAGCGATTTCATGGCGTCCTCATGAGGCCGGCCGGCCGGCCCGCCGTCCCCCCCTACCCAACCC
ATGCAAGGACGGAGCGCTGTCAGCGGCTTCCCCGAAGCAGATCATG----------------------------------
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------------------------------------------------------TTGCTTGCTTGCTGCTCTAGCCTCTA
GCCTCTAGGATGTTGCTCGCTTGTGTGATTGTGTCCTTGCTATTAAAGACCCTAAACAACCGTTGGGGATGGCATTTAGT
TTG-GATTTGGACATTCCAGCCGATAC-------GTGTGCTCCCACCACCCACCGGGGCGTGTCCTGGCGCTCTGACCTA
CCCGTCTTTTGTACCGGCGCGTGAATGAACACGGGCATGGGTGGCGAGATCCGTTGGTGGTGACCGGTGATTGGGAT---
--CCCACCACCTAATGC--TGTGTCATGCAGGTCCTGTTGTGTTTGCCAGTTGGTGTGTGC---TAGGGACTATATTATC
GGTCTGTTTGCGGGAATTCCAGCTGGTTCGTGTCGAAGGTTATTCTTATCCTTGCCGTTGCTGTTTATGTGGATCTGAGA
TGGTTTTCATGTGGACTCTGGAGCGTGCATTTTCTGGGTTCGGCGCCCGCACTAGTATCCCATTTTCTCTGTCGC-----
--------------------------------------------------ATAATATAAGAGCAACCATGCCCTTACAAA
CTACTCCCTCCGT-GCATAATATAAGAGCGTTTTTGACAGAGAGGATAACAAAGTCATCATATTCACAACCTCTTCATAA
TTTTTG--AAGGCTGTGGAGA-TGCGC-AAACAGAGGGTCGACATAATGCGTTCTTCATAACTTTTCTTTTCCGTTTTCT
TCTATCTACTCTATTACTACAATTTAGATCAAACAGTTCCACAAATATTATTATAAACCATTGGACTAAAATAAAGAATG
GTTGAGCCAATATTATTACAAACCATCATGGAGGCAGTGGCGGAGCCAGGATATCTGGATGAGGAGGGCCGAGCGTTCTT
AACTCTTGTTGGAGAGGGCCATTCCATCAAAATACACCATTTTAATAGCAAAAAAATCAGTGTTTACATTAGTGCTAGGC
CTAAATTAGTGACATTAGTGGGGGGGGGGGGGCAGGATCCTTGCTGGTCCCCCGGCTCCGCCACTGCATGGAGGCGAGCT
GGGCCAAATTGTGGTTGTCCGGGAGCAGAGGAGGCACCAAGTGGTGGCGGCGCGAT-GATGTGGGCCACAACGGAAGGGA
ATGCGCATCCAGGAATGTCCGTGGCGCCAAGACAGGAATGATCGTGGCGCCAAGATTTAGGTGGATATAAG-----CCAT
ATCGCCTCGCTCAACCGTCAAATATGAAGGCTTGCGGGCTCGATTTGGAGTTGCCTAAAAAATATG-------GCGCATG
ATGATTATTCTGCTAGATGCGCTTTTTCAACCAGAATCGTAGTACCGGCGGTTAATAGGGCAACCAAATCTATACAATGA
CTCTCCTAGAGTTGCATTTAGACAGACAATATCATTGATAGATAATGTATCTATCACCCCACAGAAATTCAAATCCAAGC
ACGATGGGTAATAA------------------TATTTTTAACACGTATGATCGCAGATGCTCACCCCAATGAACGTGCAC
ATGTACACGCTACACCTATGAGCACCTTCGTGATACTGAGTGGACACAACATCTTGAGACTGA
>chr2A_9
--------TGTATCAAGCATGCCATGGTGAGCGGTGCCATGCCTGGCACGTTTAGCCTGCGGTGTCTATTTCTCGCATTA
AGCGAGACAAACGGGATCTCTCGCAACGAGTGACTACAGTAACAGGCCAGATCGTTAGCGCATTTTTTCCAGAAAAATGG
AGTAAAAACAGTGCGCTCAATCTTGGGATCCCCGGTTTAGTCGATGCACTGCTAACCACTGCATCACGATCAGCTTCGTG
TA------------CATGACTTACTAGAAGGGAAAAGAGCCGGGGTTTTCACACGGATCCATTTTTCTTTTTCCTCTTTT
TAATGCGTATTTTTTC------TTTTCTTCATTTTTATTAGGTTTTCTTCGGGTTTTTTCTTTTTCTCTCCTTTTTTTTG
TTTTTTTCATTTTTTCAT------------------------------T--TTTTTTTGTTTTCTTCTCCATTTTTT-GT
TTGGTTACCT-TTTTTCTTCTCCATTTTTTTACTTTTTGTTTTTATTATGTTTA---TTTTTTTTCACAGTAAATTTTTC
GTATGTGTCAAATTTTTTTAATAAGTGAGCAACATTTTTTGTATACACGTTTCAAAATTCTCCAAACGCTTATCCAATAT
TTTTTAAATACTCGTTCAAAATTTTCTAAATACTTATTCAACACTTTTCAAATACTCTTTCAACATTTTTTAATATCTAT
TTAACATTTTC-AAATACTTGTTTAACATTTTTCAAACACCCGTTCATCATTTTTAATACTTATTCAATATTTTAAAATA
CTTGTTCAACATTTTTAATACATATTAAATATTTTCAATTGTTTGTTCAATA-TTTTCAAATACTTGTTAAACATATTTT
AATACTTATTTAACATTTTTCAAATACTTGTTAAACATTTTTAATACTTATTGCAT-TTTTTAAAATACTCGTTAAACAT
TTTTAATACTTATTCAACAT-TTTTT-AAATTCTTGTTCAAGATAATAATTCAAATTACAAAAA--TAAATCAAAAAAGT
CGAGAACAGAAAACAGAAAA---AAAACAAAAAACGGGCCGTGGCCTCCCACGCGGACGGGCCGGTCCATGTGGGGCTCC
CCCCGCCCGACGCGAGGCTTTCCCCCTTGTCTCTCGGCTTAAAGCGAGAAATAGGGGCGCCCTGTTTAGCCCAGGACGGG
CCGTGCTGGCTCATCTGGCCAGGTTTGATCTGCGGCCCACCATTGACGGCCCGCTGAATGAACGGCGGCAGCGACGACCG
TCCTCTCCTCTCCTCTCCGTCTCTTCTTCCCCACGCTGCCCTCGCTTTCCAGCCACGCAACGATCCACT-GCCTCGCTCC
CGGCCCCGCGCCTCCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTCTGAGTACCGCGCGGAACGGCGCAAATAGC
TCGAGGACGAGGCATCTAGCGTGCTTGTGTTCGTGCTGACTGAAAATTATTCCGCGAGGCGCTAGTTGTTGGGGGGA-AG
AACTCGTGGAATTGCTGATTTCGGGGCGCCTGTACTATTTGTTTGTTTATCTTGCGTAAAAATTCAGTCTTCAGGGGAAT
CAGTCCTTTCCACCACCACCAACTGAAATTATGCCATGTAATTACTAGTAGTAAAAAGAAGATGTTCATCCTGGCATAG-
-----------------------CTTGGTTACTTTTTGGTCATATTAAAATGTAAGATTTGCCTACAAGGTACATAATAA
TAAGCTGAAAAAAGGATAGTAAAGCCTGCATGCTCAATAACATCTCAAGGATTTTGCTACAATAGGCGAAATATACGTGG
CGCCATGACTGATTGAAATAGTCGGTGTGTTGTTAGCTGCTCCTACTGCAGGACTTGCTGCTGCTTTTCCAGCAGATTGC
ACTTCCCGTGAATATCTTCGGTTTTCACATGTTCAAAGAAAAATTCCATGATCCACCGAATTGTGAACACGATGTTAAGA
CACAAATCTTATGCTTGACAAGATAATGATCTGACAA-------------------------------------CACGTC
GAGTAGTGAAGATTGTTTGAGATAGG--TAAGCATGTTATCCCCCTTGGCTGATGATTCTAGGCATATC----TCTCTGA
TGCAGGCTTGCAAGCATGTATATTCGAGTCAAGCGGAACAAGACCACCTACTTCATACAGTGTGATCCAACAGAGACAAT
TTTGAATATCAAGCAGAAGCTGCAGTCAATAACAGACCACCCTCCTAATAACCAGAGGTTGATCTTGTTGGCTACCAACA
ATATATTGGATGACTCCAAGACGCTTGCTGATCAAAAGGTAACAATATATGTTAGTTGTCGGCGAGCACATTTGCCTACT
GTTCACAGAGGAAATTACGTTCTGTAGGCATGGTACAATTCGATTCGTCTACCCTTAGTTTATTAATT----TTATTTCC
AGATCAAAACCACCATTCAGCTTAACCCACTT-TTCACTTCCATGACTTTAAGTTGATTTTGATATGTGTGCAGGTGGAG
AATGACGCCGTCGTTGCATTGGCATTGAGAAAAGGTTCTGTTCTAGTATCACTTGGCTTTATGTTTGACACTTATGCACT
CAATGTTTAGCTTGTTGTCTGTTTTTGAGCTATTCCTTCGTGTTCCTTCTGTCCTGACTCTGAGTAACAACCGGGCATAG
TTATCATTTTTGTAGCAATGGTTGTTGCCACCAACTGCTTCTTTTGTACAAAGTGTCTTTATGAAGAATAATTCTTGTTA
TTATTTTTCTGTAGTACATGATA-GATCATCATTCTCCAATCACAAGCGAGATATGTTTTACAAAACTGTCGGTGCAACA
AAATGAATTTTTATATCCATCTTGCTCTCTATTAACTTGTGGTTCATTTCCTTCACTGTAACAAATAAATAAAAGCATTA
AAGTTGAGATGGAACCTGAAGGACATTTACAAATTGCCTGCCTGTAAATACCATGCCGGAGCAAAGCAAATGACAACTTT
TCTGTATTATGCCATGGTGGTTACAGACTACAGTGCCTAGGCTCGTGTTCCCTCTAGAACAATGCTACGTACCCAATTCT
AATTTGCTATTGAAAAATATGGTGATTCCTAATGCTACGTAGTACCAAGCTTTACTAGTTCTGTCGTTTGTCCATGACTC
CTCTATAGCTGCTGCGTTTTTCAAACTTGCTGACTTTGTAACATTCCGTTTCCTTTCACCAGACAACGAGTTCGAGGAGG
TGTCCATCGCCGACCCAAGCGATTACATGGCGTCCTCATGAGGCCGGCCGGTCCGTCGCCGT--CCCTCCTACCCAATCC
ATGCAAGGACACTGGT--------GGCTTCCGTGAAGCAGATCATG----------------------------------
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------------------------------------------------------TTACTTGCT---TGCTCTAGCCTCTA
GCCTATAGGATGTTGCTCACTTGTGTGATTGTGTCCTTGCTATTAAAGACCCTAAACAACCGTTGCGGATGGCATTTAGT
TTG-GATTTGGACCCTCCAGCCGATACGTGTGATGTGTGATCTCACCACCCACCGGGGCGTGTCCTGGTGCTCCGACCTA
CCCGTCTTTTGTACCGGCGCGTGAATGAGCACGGACATGGGTGGCGAGATCCGTTGGTGGTGACCGGTGATTGGGATCCC
TTCCCACCACCTAATGCTGCGTGTCATGCAGGTCCTGTTGTGTTTGCCAGTTGGTGTGTGCTGCTAGGGACTATATTGTC
GGTCTGCTTGTGGGAATTCCAGCTGGTTCGTGTCGAAGGTTATTCTTATTCTTGCCGTTGCTGTTTATGCGGATCTGTGG
ACTCTG------------TGGAGCGTGCATTTTCTGGGTTCGGCGCCCGCACTAGTATCCCATTATCTCTGACGCCGGAT
TGAAAGTAGATGTCTCCCAGTGACTCCCAC--------------------------------------------------
-------------------------------------------------------CATAATACTCGCAGCCTCTTCATAA
TTTTTTTTAAGGCTGCGGAGA-TTGTGGAAACACAGGGTCGACATAATGCGTTCTTCATAACTTTTCTTTTCTGTTTTCT
TCTATCTACTCTACTACTACAATTTAGATCAAACAGTCAAACAAATATTATTACAAATCGCTGAAGTAAAAATAAAGAAT
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---------------------------------------------------------------
>chr2D_409
--------------------------------------------------------------------------------
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----------------------TTTTCATTTTCTTTTCATATTTTTTATTATTTTTTTGTTTTATTCTCCATTTTTT-GT
TTGGTTGCC--TTTTTCTTCTCCATTTTTTTACTTTTTTTTTCTTATGTTTGT---TTTTGTTTTCATGGTACATTTTTC
GTATGTGTCAATTTTTTTCAATAAGTGATCAACATATTTTGTATACACGTTTCAAAATTGTCTGAACGCTTATCCAACAT
TTTTTAAATACTTGTTCAATATTTT-TAAATACTCATTTTTA-------AAATACTCGTTCAACATTATTTAGTACCTAT
TCAACATTTTTTAAATACTCGTTAAATA-----------------------TTTTAATACTTACTCAATATTTTCAAATA
CTTGTTTAACATTTTTAATACTTATTCAATATTCTCAATTATTTTTTCAACATTTTTTAAATACTCGTTCAACATTTTTA
G-TACTTATTTACCATTTTTCAAATACTTGCTCAACATTTCTAATAATTATTCAACATTTTTTAAATACTCTTTCAACAT
TTTTAATACTTATTTAATATTTTTATAAAATTATTTTTCAAGATAATAAATAAAAGTACAAAAAAATAAAGC--AAAAAT
CGAGAACAGAAAACAAAAAC---AAAAAAAAA----GGCCGTGGCCTCCCGCGCGGATGGGCCGGTCATCT---------
----------CGCGAGGCTTTCCCCCTGTCTA--------------------------GCCCCGTTTAGCGCAGGACGGG
CCGTGCTGGCCCATCTGGCCAGGTTTGATCTGGGGCCCACCATTGACGGCCCGCTGAATGAACGGCGGCAGCGACGACCG
TCCTCGCCTCTCCTCTCCGTCTCTTCTTCCCCACGCTGCCCTCGCTTTCCAGCCACGCAACGATCCACCGGCCTCGCTC-
---CCCCGCGCCTCCGCCGTCCTCGCTCGCCCCGCCGACTCCGGCCGGATCCGCCGCCCCTCTCCCGCCGGCAGTTGAAG
CGCGGATCGGACAGGTGCGTCTCCTTCCGCCGCGGGCGAATCTAACAGCCCCCCCTTGC---------------------
--------------------------------------------------------------------------------
------------------------------------------------GTCTGAGTAGCGCGCGGAACGGCGGAAATTGC
TCGGGGACGAGGCATCTAGTGTGTTTGTGGTAGTGGTGACTGAAAATTATTCCGCGAGGCGCTAGTTGTTGGGGGGGGAG
AACTCGTGGAATTGCTGATTTCGGGGCGCCTGTACTATTTGTTTGTTTATCTT--GTAAAAATTCAGTCTTCAGGGGAAT
CAGTCCTTTCCACCGCCACCAACTGAAATTATACCATGCAATTAC---TAGTAAAAAGAAGGTGTTCATCCTGGCATACC
TTTGTTACTTTTTTTTAACTTACCTTGGTTACTTTTTGGTCATATTACAATGTAAGATTTATAC--------------AA
TAAGCTGAGAAAAGGATACGAAAACTTGCATGCTCAATAACATCTTAAGGATTTTGCTACAATAGGTGAAATATACATGG
CGCCATGACCGATTGAAATAGCCAGTGTGTT---AGTTGCTCCTACTGCAGGACTTGTTGCTGCTTTTCCAGCAGATTGC
ACTTCCCGTGAATATCTTCGGTTTTCACATGTCCAAAGAAAAATCCCATGATCCACAGAATTGTGAATATGATGTTAAGA
CGCAAATCTTATGCTTGACAAGATAATGATCTGACAACGCGTCGAGTAGTTTCTTTTTTCGATAAAGGGTGGAACGCGTC
GAGTAGTGAAGATTGTTTGAGATAGG--TAAGCATGTTATCCTACTTGGCTGATGATTCTAGGCATATCTCTCTCTCTGA
TGCAGGCTTGCAAGCATGTATATTCGAGTCAAGCGGAACAAGACCACCTACTTCATACAGTGTGATCCAACAGAGACAAT
TTTGAATATCAAACAGAAGTTGCAGTCAATAACAGACCACCCTCCTAATAACCAGAGGTTGATCTTGTTGGCTACCAACA
ATATATTGGATGACTCCAAGACGCTGGCTGATCAAAAGGTACCAATATATATTAGTCATTGGAGAAAGCATTTTCC----
----ACAGAGGGAATTATATTTATTAGGCATGGTACAATTTGATTTGGGTAGCCTTAGTTTAGTGATTTTACTTATTTCG
AGATCAAAGACACCATTCAGCTTAACCCATTTTTTTACTTCCATGACTTAAAATTGATTTTGATACTTGTGCAGGTGGAG
AATGACGCCGTCGTTGCATTGGCATTGAGAAAAGGTTCTGTTCTGGTATCGCTTGGCTTGATGTTTGACACTTATGCACT
CAATGTTTAGCTTGTCGTCTGTTTTTGAGCTATTGCTTTGTGTTCCTTCTGTTCTGACGCTGAGTAACAACCGGGCATAG
TTATCATTTTTGTAGCAATGGTTGTTGCCACCAACTGCTTCTTTTGTAGAAAGTGACTTTATCAAGAATGATCCTTTTTA
TTATTTTTCTGTGGTACATCATAAGGTCATCATTCTCCAATCGCTAGCGAGATATGTTTTACAAAACTGTCGGTGCAACA
AAATGAATTTTTATATCCTTCTTGCTCTCTATTAACCTGTGGTTCATTTCCTTCACCGTAATAAATGTATAAAAGCATTA
AAGCTGAGATGCAACCTGAAGGACATTTGC-AATTGTCTGCCTGTAAATACCATGCCGGAGCAAATCAAATGACAACTTT
TTTGCACTATGCCATGGTGGTTACAGACTACAGTGCCTAGACTCGTGTTCTCTCTAGAGCAATGCTATGTACCTAATTCT
AATTTACTACTGAAAAGGATGGTGATTTGTAATTCTA------ACCAAACTCTACTTGTTCTGTCGTTTGTCCATGACTC
CTGTATAGCTGCTGCGTTTTTCAAACTTGCTGACTCTGTGACATTCCGTTTCCTTTCGCCAGACAACGAGTTCGAGGAGG
TGTCCATCGCCGACCCGAGCGATTTCATGGCGTCCTCATGAGGCCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATGTTGCTTGCTTGCT---CGCTCTAGCCTCTA
GGATGT------TTGCTCGCTTGTGTGATTGTGTCCTTGCTATTAAAGACCCTAAACAACCGTTGCGGATGGCATTTAGT
TTCTGATTTGGACATTCCAGCCGATAC-------GTGTGATCCCACCACCCACCGGGGCATGTCCTGGTGCTCTGACCTA
CCCGTCTTTTGTACCGGCGCGTGAATGAGCACGGACGTGGGTGGCGAGATCCGTTGGTGGTGACCGGTGATTGGGAT---
--CCCACCACCTAATGCTGTGTGTCATGCAGGTCCTGTTGTGTTTGCCAGTTGGTGTGTG---CTAGGGACTATGTTGTC
GGTCTGTTTGCGGGAATTCCAGCTGGTTCGTGTCGAAGGTTATTCTTGTTCTTGCCGTTGCTGTTTATGTGGATCTGAGA
TGGTTTTCATGTGCACTCTGGAGCGTGCATTTTCTGAGTTCGGCGCCCGCACTAGTATCCCATTTTCTCTGTCGCCGGAT
TGAAAGTAGATGTCTCCTACCATGCCCTTACAAACTACTCCTTCCGTCGCATAATGTAAGTGCGACCATGCCCTTACAAA
CTACTCCCTCCGTCGCATAATATAAGAGCGTTTTTGATAAGGAGGGTACCAAAGTCATCATATTCGCAGCCTCTCCATGA
TTTTTTTTAAGGCTGGGGCGATTGCGC-AAACACAAGGTCGACATAATGTGTTCTTCATAACTTCTCTTTTTCGTTTTCT
TCTATCTACTCTATTACTACCATTTAGATCAAACAGTCCCACAAATATTATTATAAACCATTGAACTAAAATAAAGAATG
GTTGAGCCAATATTATTACAAACCAT------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CATGGAGGCGAGCT
GGGCCAAATCGTGGTTGTCCGGGAGCAGAGCAGGCACCAAGTGGTGGCCGGCGCAAGGATGTGGGCCACAACGGAAGGGA
ATGCGCATCCAGGAATGT-----------------------TCGCGGCGCCAAGATTTAGGTGGATATAAGGAAAGCCAT
ATCGCCTCGCTCAACCGTCAAATATGAAGGCTTGCGGGCTCGATTTCGAGTTGCCTAAAAATATGGCGATGGAGCGCATG
ATGATTATTCTGCTAGATGCGCCGTTTTGACCAGAATCGTAGTACTGGCGGTTATTAGGGCGACCGAATCTATACAATGA
TTCTCCTAGAGTTGCATTTAGACATACAATATCAT----------------TATCACCCTACAGAAATTCAAATCCAAGC
ACGATGGGTAATAACTTTGAGTTTGGTACTATTATTTTTAACACGTATGATCGCAGATGCTCACCCCAATGAACGCGCAC
ACGTACACGCTACACCTATGAGCACCTTCGTGATACTGAGTGGACACAACATCTTGAGACTGA
>SNPs
SSSSSSSS----S-----S------S-----S----------------S-----S--S-S--S-----------------
--------S-----------S-S---S---S-S--------------SS-SS--------S--S-----S----------
------------------S---S-------S-----------------------------------------SS---SS-
--SSSSSSSSSSSS-------------------------S--------------S-S-----------------------
--S-SS--S--S---SSSSSSS--------------------------SS---------S-----S--S-----S----S
-S---S--S------SSSSSSS--------S-----------S---SS-----------------------------S--
--------S-S-------------------SSS----S---------S-----SSS-----S------------------
-----------S-------------------S---------------S-------S-----S------------------
----------S-------------------------------------------S--S------------------S---
-----------------S--S--S-S-----------S---S-----S-S------------------S-----S-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S------S-------S-S------S-----------------------S-----------------------------
-S--------S------S--SSS---S---S----------------------S-S---------S----S---------
--------------------------------------------------------------------------------
-----------------S--------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------S---S-------------------
---S--------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------S---------------------------S-----------------------------------------
------S-----------------S-S-------------------------------S---------------------
---------------------S--------------------------------------S-------------------
---------------------------S----S---------S-------------------------------------
------------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S---S------S------S--------
--------------------------------------------------------------------------------
--------------------------SS----------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
---------------------------------------------------------------S----------------
---S----------------------------------------------------------------------------
----------------------------------------------S---------------------------------
-----------S---------------------------------S------S----S---------------SS-S---
--S------S------SS-----------------S---------------------S-------SSSS---S-S----S
--S------------------------------S-S-------------------S------------------------
-----------S-----------------------------S------S-S-SS--------------------------
--S----------S------------------------------------------------------------------
-------S------------------------S-----------------------------------------------
------------------------------------S----S--S--------------------S----S---------
--------S----------------------------------------------------------------S-S----
---------------------------------------------------------------S----------------
---------------------------------------------------S-S-S-SS-SSSS---S---------S--
----------SSS-SSSSSSSSSS-------SS-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------SSS--------------
----S------------------------------------------------------------S--------------
---------------------------------------S----------------------------S-----------
----------------------------S-----S---------------------------------------------
-----------------------------------------------------------------------------S--
-------------------------------------------------S------------------------------
-------------S------------------------------------------------------------------
-------------------------------------------------------S----S--S----------------
-------------------------------------S-SS----S--S----------------S--S-----------
-----S---------S-----------------S----------------------------------------------
-------------------------------------S-------------------------S----------------
--------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
---------S--------------------S-----------------S-SSSS-S------------------------
------------------SSSSSSSSSSSSSSSSSSSSSSS---S-----------------------------------
----------------------------------------------S--------------SSSS---------------
----------------------SS---SS----------------S--------S------S---S--------------
S-----------------------S----------SSSSSSSSSSSSSSSS--------S--------------------
---------------------------------------------------------------------------S----
-S-------------------------------------------------------------
>forward_297
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------AGTCGGGGTTTTCACACTGG-----------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_1767
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--------------------------------------------------------------------------------
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------GGGAATTGCTGATTTCGGCG------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------
>forward_1719
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------CGTGTTTGTGTTCGTGGTGG-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_3588
--------------------------------------------------------------------------------
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-------------------------------------------------------------------CCCTACCCAACCC
ATGCAAG-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>forward_1862
--------------------------------------------------------------------------------
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--GTCCTTTCCACCACCACCAG----------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------------------------------------------------
>reverse_4229
--------------------------------------------------------------------------------
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--------------------------------------------------------------------CGCTCTGACCTA
CCCGTCTT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_2994
--------------------------------------------------------------------------------
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--------------GCAATGGTTGTTGCCACCAG----------------------------------------------
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---------------------------------------------------------------
>reverse_4398
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATC
GGTCTGTTTGCGGGAAT---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>forward_4200
--------------------------------------------------------------------------------
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--------------------ATTCCAGCCGATACGTGTGC----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
>reverse_5230
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------AGACAGGAATGATCGTGGCG-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------
