>input_sequence_30120
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----------------------------------------------CCTTATCCTCTCCGGACCGGAGCGAGCGAGCGCC
CCACCGCTCCCTGCTCCCCGCTCCCTCCCGATGGCGTCCCTCACCAC---------------------------------
----------CACCACCGCCTCCTCGCCGGCCGCCCTGCCCGCGGCGGCCTCCGCC------------------------
--------------------------------------------------------------------------------
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--------------------------------GCCCCGGCCACGGCCTCGTCCGTCTCGCCCACCGCGGCCGCCTCCAAG
CGCCCGCACCTCGCCGGCGACGACGCGCCCTGGCGCGTCGCGGCCGCCGGCTCCGCCGGAATCCGCCCCGTCCCGCGCAT
CCACCACGCCCCCGTCCTCCGCGTCGCCCAGGACGACTCCTCCGCCTACGCCCTCGCCATCATGAGGGTACGTACCGCTC
CGCCTTGGTTTTGGTTTGGTTCAATTTTCGTCGGTTGGTGGGTAGGTGAGGG-GAGGCCTGAATTTGATCCCCATCTCTC
TCTCTCTGCAGAATCCGGATCCGATAGGGATGGGGCTGGCCATGGAGGCCGTAGCTGAGGCTGCTGGCCCGGAGTGCCTC
GTGCCCGGCCAGCAGGCGCCTCTGCGGCTGATGGGACTCAAGGTACAAATCCATCTATCCCTCTCCTTATCTCATCGTTA
CGCCCACGTTTTGATCTAGTAGCTGTCTAGCAGTATCTGACCGTTACGCCTATGTTGTCGATCTAGCTGTTGAATGGTGT
GATCATAGTTTTTGAGGTGAAGCGTGCCATGTTTCTCT----TCTATTCTGCATCATGATCGAATAGATTCGCTCAATTA
-------------------------------TGCATCATGGTTGAATAAATCCACTTGATTCCATGTCATAA--TGATAT
TAGGTTGATTCCGCCTCTGATTGGATACTTTGGTGATAGTGGTTGTTCGTTGGTTATCATCTGTAGTTGTGTGCGCTATA
CTTTTATTAGCCCACACATGTTCTGTTAGTTTGTTTGCAGGTTTCGTAGTCACACCAATTGAAAGAAAAAAGATGACGTT
CACTTGTTGGAAAGCAATCATGTAATTAGTGATGTGTTCCTTCTGTTGTGGGAAACTAGTCTATGACCACTGGACACGGT
TGGCATTATAAGGTTCATGTTTTACAGTATCTCTAATTTGATAAAAGAAACCACCAGCAATTGTCTGAGATCATTGTTTG
TTTGCATATCATGGTGTGTGTGTTTACGTCAGAACTCTTATACTCTCTCCGATCCATATTACTTGTCGCAGTCTTAGTAC
AGCTGCACTACAAATTTGCACTAGGACTGTGACAAGTAATATGTATCGGAGGGAGTACTATACTATAGCCCATTTCATTC
TCTTGTTGATGGTTTCAAGCATCTAAATGGATAGCTGAATAAATTGTCACATATATGGCATCCAAATACTTGAGAAGTTC
AGTTAGCTGTGCCTTCAGCCTGACCGGTGTTTACATATATACACACACAT--AGTGTTTTTCTTTTGCTTGTTTATCTTT
CATTTTCTGCATATTTACTATTTTTGTATAGCGCCAATAGTATGTATAGCCAAAATG---------TGAAATGTTGCAGA
TGATAAGCAGTCAAAAGTCATTTGCTAATTTTGATATTTACTATTTTGTTATCTCTATGCAGGTTTGGCCCCTAGATATA
GAGAT-GAAGTTCTTGGAACCATTTGGCCGGGAATTACACTCCATGAAGAAGGTATGACTTTAACTTGATATTTTTCCTT
CTGTAGTTCGGTTACATACTTGCATTTTGTGTTTTGATGAGTTATGAAGTATTCCCAAATGCTCTTATATTT-CTTTACG
GAGGGAGTATCTTTATCTTTATTAACTCCAAGTATGTGTTGAT-------------------------------------
--------------------------------------------------------------------------------
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------------------------CAGTAGGGCCATCAAACCTTTCATTTGCAGTGGCCTCAGCCAACCATAATCATGTG
CAACTTCTGGTTTAAGCACTTCCTAGTATTCTTGGTGTGTGGTTTAGGACTTATCAACTATTGGTGGTTAATCCCCGAAA
AATAAAAAGATTATTGGTCGTTGTGTATAGCTTTTGGTTTCTTGTCATGATAAGTTTCATTAGTTACTCCTCAGTTGTTG
GAATGCTTATATATACATGGTTTGATCTGAATTCTGAGTGGGGTTCACTCACACCCTGTGGTAGTGTCAGTATTCTGTCA
GTAATTGGTTCTCTCCAGTGGGTTGTATGCTCGCTTCTTATCACCCCAATAGAATTTGTAGGTTCTCTTGGTAGTTGTTG
AAGAAGAAATCTTTATTTTGACCTCCTTATATTGTGGATTGTTTTTGTAAGAAACGTGCACTCGTATATC--ATACGCTG
TGATATCGGCCTACTTGGTCGGCAAGTGCTGATCTCCTTCACTTCTTGTGCCCATTTTGCAGTTCATGGACAAATCA-TG
CAGCGTCATGGACTCATCTTCTATAGCACATAAGTAGGCGCGCATGCCAGATTGGTTCCT--CCACTACCTAGCTGATGT
TGTTTGTACCCAGACTACCCACAGTGCCTGATGAAGCTACAAGACTTGCAAA-----------TAGACGAGCCCACGGAG
AAACAACATCCTTGTGTATCTTGAGCTGCTGCATCACTTGATGGAACGAGATATGGT-GTCGGGAACACAGCAGGATTAG
CAAGTAATTTCGAGAGTAATCTTGTATGCGCCCTGGGCTCAGTTTGCGCCGTGATAAATTGTTTTCAACATGTAATACAT
TTGTTATACTCGT-------------------------------------------------------------------
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----------------------------------------
>chr3B_1_TraesCS3B01G345900
GAATTGGTTATAAGAAATGGCACAAGGTGGCACACGAAGTATGTTTTGTAATTTTTTCGCCCGTTGCAACGCACGGGCAT
TTGTACTAGTATACTCTAAATACTCTTATATTTCTTTACAGAGGGCTACTATTTTTTTAT--TTTAATACCAGATCTAGA
ATCCCTTCCCGTGTTTAAAAAAGAAAGGTAAACTTCGATGGTAAGCCACCCCCTCCTCCGGTGCACTTTTCCCACAAAAT
AAACAACTCTCCTTATATCTCGTTATAAAAACTCTAATAACTAGCACTAATACCTTGACCAATATAAACGTCCAAGAGAA
AACAACAA---TAGTAAACAACACTTCTCGACAGAACATTCGGACCCTCAAAAAAAAAAAAGACAGATCATTCGCCACCG
GACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAGCCAAC
ACGCATACGGAACGGGCCTCGTCTCCCCCTCCG-TCCCTCCCCCCGCCTTATCCTCTCCGGACCGGAGCGAGCGAGCGCC
CCACCGCTCCCTGCTCCCCGCTCCCTCCCGATGGCGTCCCTCACCAC---------------------------------
----------CACCACCGCCTCCTCGCCGGCCGCCCTGCCCGCGGCGGCCTCCGCC------------------------
--------------------------------------------------------------------------------
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--------------------------------GCCCCGGCCACGGCCTCGTCCGTCTCGCCCACCGCGGCCGCCTCCAAG
CGCCCGCACCTCGCCGGCGACGACGCGCCCTGGCGCGTCGCGGCCGCCGGCTCCGCCGGAATCCGCCCCGTCCCGCGCAT
CCACCACGCCCCCGTCCTCCGCGTCGCCCAGGACGACTCCTCCGCCTACGCCCTCGCCATCATGAGGGTACGTACCGCTC
CGCCTTGGTTTTGGTTTGGTTCAATTTTCGTCGGTTGGTGGGTAGGTGAGGG-GAGGCCTGAATTTGATCCCCATCTCTC
TCTCTCTGCAGAATCCGGATCCGATAGGGATGGGGCTGGCCATGGAGGCCGTAGCTGAGGCTGCTGGCCCGGAGTGCCTC
GTGCCCGGCCAGCAGGCGCCTCTGCGGCTGATGGGACTCAAGGTACAAATCCATCTATCCCTCTCCTTATCTCATCGTTA
CGCCCACGTTTTGATCTAGTAGCTGTCTAGCAGTATCTGACCGTTACGCCTATGTTGTCGATCTAGCTGTTGAATGGTGT
GATCATAGTTTTTGAGGTGAAGCGTGCCATGTTTCTCT----TCTATTCTGCATCATGATCGAATAGATTCGCTCAATTA
-------------------------------TGCATCATGGTTGAATAAATCCACTTGATTCCATGTCATAA--TGATAT
TAGGTTGATTCCGCCTCTGATTGGATACTTTGGTGATAGTGGTTGTTCGTTGGTTATCATCTGTAGTTGTGTGCGCTATA
CTTTTATTAGCCCACACATGTTCTGTTAGTTTGTTTGCAGGTTTCGTAGTCACACCAATTGAAAGAAAAAAGATGACGTT
CACTTGTTGGAAAGCAATCATGTAATTAGTGATGTGTTCCTTCTGTTGTGGGAAACTAGTCTATGACCACTGGACACGGT
TGGCATTATAAGGTTCATGTTTTACAGTATCTCTAATTTGATAAAAGAAACCACCAGCAATTGTCTGAGATCATTGTTTG
TTTGCATATCATGGTGTGTGTGTTTACGTCAGAACTCTTATACTCTCTCCGATCCATATTACTTGTCGCAGTCTTAGTAC
AGCTGCACTACAAATTTGCACTAGGACTGTGACAAGTAATATGTATCGGAGGGAGTACTATACTATAGCCCATTTCATTC
TCTTGTTGATGGTTTCAAGCATCTAAATGGATAGCTGAATAAATTGTCACATATATGGCATCCAAATACTTGAGAAGTTC
AGTTAGCTGTGCCTTCAGCCTGACCGGTGTTTACATATATACACACACAT--AGTGTTTTTCTTTTGCTTGTTTATCTTT
CATTTTCTGCATATTTACTATTTTTGTATAGCGCCAATAGTATGTATAGCCAAAATG---------TGAAATGTTGCAGA
TGATAAGCAGTCAAAAGTCATTTGCTAATTTTGATATTTACTATTTTGTTATCTCTATGCAGGTTTGGCCCCTAGATATA
GAGAT-GAAGTTCTTGGAACCATTTGGCCGGGAATTACACTCCATGAAGAAGGTATGACTTTAACTTGATATTTTTCCTT
CTGTAGTTCGGTTACATACTTGCATTTTGTGTTTTGATGAGTTATGAAGTATTCCCAAATGCTCTTATATTT-CTTTACG
GAGGGAGTATCTTTATCTTTATTAACTCCAAGTATGTGTTGAT-------------------------------------
--------------------------------------------------------------------------------
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------------------------CAGTAGGGCCATCAAACCTTTCATTTGCAGTGGCCTCAGCCAACCATAATCATGTG
CAACTTCTGGTTTAAGCACTTCCTAGTATTCTTGGTGTGTGGTTTAGGACTTATCAACTATTGGTGGTTAATCCCCGAAA
AATAAAAAGATTATTGGTCGTTGTGTATAGCTTTTGGTTTCTTGTCATGATAAGTTTCATTAGTTACTCCTCAGTTGTTG
GAATGCTTATATATACATGGTTTGATCTGAATTCTGAGTGGGGTTCACTCACACCCTGTGGTAGTGTCAGTATTCTGTCA
GTAATTGGTTCTCTCCAGTGGGTTGTATGCTCGCTTCTTATCACCCCAATAGAATTTGTAGGTTCTCTTGGTAGTTGTTG
AAGAAGAAATCTTTATTTTGACCTCCTTATATTGTGGATTGTTTTTGTAAGAAACGTGCACTCGTATATC--ATACGCTG
TGATATCGGCCTACTTGGTCGGCAAGTGCTGATCTCCTTCACTTCTTGTGCCCATTTTGCAGTTCATGGACAAATCA-TG
CAGCGTCATGGACTCATCTTCTATAGCACATAAGTAGGCGCGCATGCCAGATTGGTTCCT--CCACTACCTAGCTGATGT
TGTTTGTACCCAGACTACCCACAGTGCCTGATGAAGCTACAAGACTTGCAAA-----------TAGACGAGCCCACGGAG
AAACAACATCCTTGTGTATCTTGAGCTGCTGCATCACTTGATGGAACGAGATATGGT-GTCGGGAACACAGCAGGATTAG
CAAGTAATTTCGAGAGTAATCTTGTATGCGCCCTGGGCTCAGTTTGCGCCGTGATAAATTGTTTTCAACATGTAATACAT
TTGTTATACTCGTGAACCGTTGAGAATACAATGCTGAGTTGCCAAGAGAATC--AAAAAGTGTGGTACAAATCACCATCT
CTCTTTGTACCCTTAAAG-----------------AAAAGTT-GTTCGATTACATCAAGGCTTAATCAAACTAAGCATGC
TAAAAAAACTGCAACCCTATGCTTGAAAATTCAGTTTATATATATATAAGCATTACTCCCTTTGTAAAGAAATATAAGAG
CGTTTAATATAGGAGTGTTTGGGTAAAGAAATATATCTTTGGAGTACAAAATAATACTTATATGTGAGAGCAACCTTTTT
C--GCCACATGCCAGGTGAGATGGCGAACTGGGCATACCTTCACCTT---------------------------------
-------TTGTGTTGCGTTGTGCGGGACGA--------------------------------------------------
--------------------------------------------------------------------------------
--AACATTTTTGGCGTTTCTCTTGTATGACGAAAGCGTGTGCGCAATACTGCACTAGTACGAATGGAGCTCCCCTCCCGT
ATGGGTTTGTTATTGTCGGAGTGCGACTTGTACACGAATACTACAAAGCATGCAATCGAGCGCAAAAGAAACGGGTGGTT
GACTGAATTGTTGGTTGAATTAGATAGGGAC-----------------------------TT-GGGTATGAACTTGGTGA
CGCGAGTTCCTTTCATCTCGAATTCTCGAGAATGCCCCGGTCTCCCGTGGGCGTGGCCACAACACAGGCCCCTAGTCCTT
GGGGCGGTGCTCCCCCTCCCCACGCACCGGAAACACCGGGATCGAAAGCTCCATCCACACGGCTAAAATTAGCACGCTCG
CTCCGTTCTACCGCATGCGTGTCCTCAATTC-CCATGGATGCGAATCACGGCCAGAGGATGGATTGATGCGTGAAACATA
TGCCAGAGGAACACGACGGTCTGCTACTCACGATCGTGCACGGTCCATGTGGTCCGGTGGACCATCGCTCGCTACGGGGT
TCTGCGCACTGCACGCCGGCACGGGCGGGGACC--ATGCAACGCAAGCTAGCGAACGGATGGGCACCACCGCAACGGCGT
ATCGGCATTCAGCACTGGCATATCCTCGTTCCGGAGACCG
>chr3A_90
--------------------------------------------------------------------------------
---------TATGCTCTAAACGCTTTTATATTTCTTTATAGAGAGGATACTGTTTTTCTTAATTTAATACCAGATCCAGA
ATCCCTTCTCGTGTTTAAAAAAG-------------GAAGGTAAGCCA-CCCCTTCTCCGGTGCACTTTTCGCACAAAAT
AAACAACTCTCCTTGTATCTCGTTATAAAAACTCC--TAACTAGCACT--TACCTTGACCAATATAAACGTCCAAGAGAA
AACAATAGTACTAGCAAACAACACATCTCGACAGATCATTGG--------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------TCACCGGACGGCCCCAAAGCCGAACT
CCAACTCTTCCTTCCACGAAGCGGCTCCGTAGTCCGGATTTCCCAACACGCCACCGGCCCCACGCGTCACGGACCTGGCA
CCGCACCGCACCCCACCCCACCCCCACCAGCCGCCTTCCCAGAACCGGACGCACCGCTACCGCGTNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCCCGGCCACGGCCTCGTCCGTCTCGCCCACCGCGGCCGCCTCCAAG
CGCCCGCACCTCGCCGGCGACGACGCGCCCTGGCGCGTCGCGGCCGCCGGCTCCGCCGGAATCCGTCCCGTCCCGCGCAT
CCACCACGCCCCCGTCCTCCGCGTCGCCCAGGACGACTCCTCCGCGTACGCCCTCGCCATCATGAGGGTACGTACCGCTC
CGCCTT------GGTTTGGTTCAATTTTCGTCGGTTGGTGGGTAGGTGAGGGAGAGGCCTGATTTTGATCCCCATCTCTC
TCTCT--GCAGAATCCGGATCCGATAGGGATGGGGCTGGCCATGGAGGCCGTAGCTGAGGCTGCTGGCCCGGAGTGCCTC
GTGCCCGGCCAGCAGGCGCCTCTGCGGCTGATGGGACTCAAGGTACAAATCCATCTATGCCTCTCCGTATCTGATCGTTA
CGCTCATCA--TGTTGATCTATCTGTCTAGCAGTATCTGATCGTCACA---GTGTTATCGATCTAGCTGTTAAATGCTGT
GATTATTGTTTGTGAGGTGAAGCGTGCCATGCGTGTTATCGATCAATTCTTCATCATGATCGAATAGATTCGCTCAATTC
-------------------------------TGCATCATGGTTGAATAAATCCACTTGATTCCGTGTCATAAATTAATAT
TAGGTTGATTCCGCCTCTGGCTGGATACTTCGGTGATTGTGGTTGTTTGCTGATTATCATCCGTAGTTGTGTGCGCTATG
CTTTTATTAGCCCACACATGTTCTGTTAGTTTGTTTGCAGGTTTCTTAGTCACACCAATTGAAAGAAAAAAGATGACGTT
CACTTGATGGAAAGCAATCATGTAATTAGTGATGTGTTGCTTCTGTTGTGGGAAACTAGTCTATGACCACTGGATACGGT
TAGCATTATACGATTCA-----TACAGTATCTCAAATTTGATAAAATAAACCACCGGCAATTGTCTGAGATCATTGTTTG
TTTGCATATCATGGTGTGTATGTTTACGTCAGAACTCTTATACTCCCTCCGGTCCATATTACTTGTCGCAGTCTTAGTAC
AACTGCAGTACAAATTTGCACTAGGACTGTGACAAGTAATATGTATCGGAGGGAG-----TACTATAGCCCATTTCATTC
TCTTGTTGATGGTTTCAAGCTTCTAAATGGATTTCTAAATAAATTGTCACATATATGGCATCCAAATACTTGAGAAGTTC
ACTTAGCTGTGCCTTTAGCCTGATCAATATTTACATATACATACACACATGTAGTGTTTTTCTTTTGCTTGTTTATCTTT
CATTTTCTGCATGTTTACTATTTTGGTATAGTGCCAATAGTATGTATAGCCAAAATGTGGCTAGCCTGAAATGTTGCAGA
TCATAAGCAGTCAAAAGTTATTCGCTAATTTTGATATTTACTATTTTGTTATCTCTATGCAGGTTTGGCCCCTAGATATA
GAGATGGAAGTTCTTGGAACCATTTGGCCGGGAATTACACTCCATGAAGAAGGTATGACTTTAACTTGATATTTTAACTT
CTGTAGTTCGGTTACATACTTGCATTTTGTGTTTTGATTAGTTATGAAGTACTCCCAAACGCTCTTATATTTTCTTTACG
GAGGGTGTATCTTTATTAG----AACTCCAAGTATGTGTTGGCGAAATGTAATTTAGTATGCAAGCATGCAACAATACCT
TAACAATCTTACAGAAGGGGCTTTGTTCGATTGTTTTGTCTGCATAGCATGACTCATTACAAATATGTGGCCCTCTTCAA
ACTTTGTCTTAATGTCCTCTTAAGATGTTGGTCTTGTTATGCCGAGTTAATTCATATACATGCCTGACAGCCTGAGCAAT
GTTTTGCTGAATTTTCCTCTCAAATG--TATGTTAAGAAATCTCAGTGGGTGTGAATCCAGTGTTGAATGCCTGAGAGAA
ATATGCTGGTAATGACTG----ATCAGTAGGGCCATTGAACCTTTCATTCGCAGTGGGCTCAGCCAACCATAATCCTGTG
CAATTTCTGGTTTAAGCACTTCCTAGTATTCTTGGTGTGTGGTTTAGGACTCATCAACTATTGGTGGTTAATCCCTGAGA
AATAAAAAGATTAGAGGTTGTTGTGTATAGCTT-----------------------------------------------
--------------------------------------------------------------------------------
----TTGGTTCTCTCCAGTGGGTTGTATGCGCTCTTCTTATCACCCCAATAGAATTTGTAGGTTCTCTTGGTAGTTGTTG
AAGAACAAATCTTTATTTTGACCTCCTTATATTGTGGATTGTATTTGTAAGAAATATGCACACGTTTGCTAGATACGCTG
TGATATCGGCCTACTTGTTTGGCAAGTACTGATCTCCTTCACTTCTTGTACCCATTTTGCAGTTCATGGACAAATCA-TG
CAGCGTCATGGACTCATCTTCTATAGCACATAAGTAGGCGCGCATGCCAGATTGGTTCCTTCCCACTACCTAGCTGATGT
TGTTTGTACCCAGACTACCCACAGTGCCTGATGAAGCTACAAGACC-GCAAA-----------TAGACGAGCCCACGGAG
AACCAACATCCTTGTGTATCTTGAGCTGCTGCATCACTTGATGGAACGAGATATGGTTGTCTGGAACACAGCAGGATTAG
CAAGTAATTTCGAGGGTAATCTTGTATGCGCCCTGGGCTCAGTTTGTGCCGCGATAAATTGTTTTCAACATGTAATACAT
TTGTTATATTCATGAGCCGTTGAGAACACAATGCTGAGTTGCCAAGAGAACCA-AAAAAGTGTGGTACAAATCACCATCT
CTCTTTGTTCTAAACTGACTCCTACCTCCCTTAAAAAAAGTT-GTTTGATTACACCAAGGGTTAATCAAACTAAGCCTGC
TTAAAAAATTGCATCCCTATGCTTGAAAATTCAGTTCATGTATGTACGCATTTTAAAATAATTCAGTAAAATCATAATAA
TACCAGCTCGCTATCTCAC--------------------------------------------GTGAGAGCAACCTTTTT
CC-GCCGCATGCCAGGTGAGATGGCGAACTGGGTGTGCTTTCTGTGTCAGGTGAGATGGCGAACTGGGTGTGCTTTCTGT
GTTCGCGTTGTGTGGGACCGTGGGAGTGCTAAGGTTTGTCAACTCAAAAAATATCTTCTTTTTTGAGAATTACTCGAAAA
ATATCCGTGTACATTTTTGGTGTTTCTCTTGTATGACAAAAAATATCTTCTTTTTTGAGAGTTACTCGAAAAATATCTGT
GTAACATTTTTGGTGTTTATCTTGTATGACGAAAGCGTGTGCGTAATACTCCTAG-----GAATGGAGCTCCCCTCCCGT
ATGGGTTTGTTATTGTGGGACTGCGGCGTGT---ACACCAATACAAAGAATGGAATCGAACGGTCAAGAAACGGGTGAAT
GTCTGAATTGTTGGTTGAATTAGACAGAGACATTTTTGTTTGAACTGGAATTAGATAGGCTTGGGGTATGAACTCGGCGA
CGCGAGTTTCTTTCATCGCGAATTCTCGAGAATGCTCTGGTCTCCC----------------------------------
----------------TCCCGACGCGCCGGAAACACCGG-ATCGAAAGCTCCAGCCACACGGCTAAAATTAGCACGCTCG
CTCCGTTCTGAACTGCCTACCGCTCCTCAGTTCCATGGATGCGCATCACGGCCAGTGGATGGATTGGTGCGTGAAACATA
TGCCAAAGGAACACGACGGTCTGCTACTCACGATCGTGCCCGGTCCATGTGGTCCGGTGGACCATCGCTCACTACGGCGT
TCTGCGCACTGCACGCCGGCACGGGGACCATGCAAATGCAATGCAAGCTAGCGAACCAATGGGCGCCACCGCA-------
--CGGCGTTCAGCAGTGGCATATCCTCGTTCCGGAGACCG
>chr3D_948
--------------------------------------------------------------------------------
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------------------------------------------------------------------------GAGCCAAC
ACGCATACGGAACGGGCCTCGTCTCCCCCTCCGTTCCCTCCCCCCGCCTTATCCTCTCCGGACCGGAGCGAGCGAGCGCC
CCACCGCTCCCTGCTCCCCCCTTCCTCCCGATGGCGTCCCTCACCAC---------------------------------
----------CACCACCGCCTCCTCGCCGGCCGCCCTGCCCGCGGCGGCCTCCGCC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------GCCCCGGCCACGGCCTCGTCCGTCTCGCCCACCGCGGCCGCCTCCAAG
CGCCCGCACCTCGCCGGCGACGACGCGCCCTGGCGCGTCGCGGCCGCCGGCTCCGCCGGAATCCGCCCCGTCCCGCGCAT
CCACCACGGCCCCGTCCTCCGCGTCGCCCAGGACGACTCCTCCGCCTACGCCCTCGCCATCATGAGGGTACGTACCGCTC
CGCCTT------GGTTTGGTTCAATTTTCGTCGGTTGGTGGGTAGGTGAGGG-GAGGCCTGATTTTGATCCCCATCTCTC
TCT----GCAGAATCCGGATCCGATAGGGATGGGGCTGGCCATGGAGGCCGTAGCTGAGGCTGCTGGCCCGGAGTGCATC
GTGCCCGGCCAGCAGGCGCCTCTGCGGCTGATGGGACTCAAGGTACAAATCCATCTATCGCTCGCAGTATCTGATCGTTA
CGCTTATG--TTGATGATCTAGCTGTCTCGCACTATCTGATCGTTGCAATTGTGTTATTGATCTAGCTGTTGGATGGTGT
GATTGTTGTTTGTGAGTTGAAGCGTGCCATGTTCCCCT----TCTATTCTCCATCATGGTCGAATAGATTCGCTCAATTC
TTCATCATGATCTAATAGATTGGCTCAATTTTGCATCATGGTTGAATAGTTCCACTTGATTCCGTGTCATAAATTGATAT
TTGGTTGAATCCGCCTCTGGTTAGATAATTTGGTGATTGTGGTTGTTCGTTGATTATCATCCGTACATGTGCGTGCTATG
CTTCTATTGGCC----CATGTTCTGTTAGTTTGTT-GCAGGTTTCGTAGTCACACAAATTGAAAGAAAAAATATGGTGTT
CGCTTGTTGGAAAGCAATCATGTAATTAGTGATGTGTTGCTTCTGTTGTGGGAAACTAGTCTATGACCACTGGATACGGT
TAGCATTATACGGTTCATGTTTTACAGTATCTCTAATTTGAT-AAAGAAACCACCGGCAATTGTCTGAGATCATTGTTTG
TTTGCATATCATGGTGTGTATGTTTATGTCAGAGCTCTTATACTCCCTCCGATCCATATTACTTGTCGCAGTCTTAGTAC
AACTGCAGTACAAATTTGCACTAGGACTTTGACAAGTAATATGTATCGGAGGGAG-----TACTATAGCCCATTTCATTC
TCTTGTTGATGGTTTCAAGCTTCTAAATGGATAGCTAAATAAATTGTCACATATATGGCATCCAAATACTTGTGAAGTTC
AGTTAGCTGTGCCTTTAGCCTGACCGGTGTTTACATATATACACACACACGTATTGTTTTTCTTTTGCTTGTTTATCTTT
CATTTTCTGCATGTTTACTATTTTTGTATAGCGCCAATAGTATGTATAGCCAAAATGTGGCTAGCCTGAAATGTTGCAGA
TCATAAGCAGTCAAAAGTCATTTGCTAATTATGATATTTACTATTTTGTTATCTCTATGCAGGTTTGGCCCCTAGATATA
GAGAT-GAAGTTCTTGGAACCATTTGGCCGGGAATTACACTCCATGAAGAAGGTATGACTTTAACTTGATATTTTTCCTT
CTGTAGTTCGGTTACATACTTGCATTTTGTGTTTTGATGACTTATGAAGTACTCCCAAACGCTCTTATATTT-CTTTACG
GAGGGAGTATCTTTATTAG----AACTCCAAGTATGTGTTGATGAAATGTAATTTAGTATGCAAGCATGCAACAATCCCT
TAACAATCTTATAGAAGGGGTTTTGTTTGATTGTTTTGTCTGCATAGCATGACTCATTACAAATATGTGGTCCTCTTCAA
ACTTTGTCTTAATGCCCTCTTAAGATGCTGGTCTTGTTATGCCGAATTAATTCATATACATGCCTGACAGCCCGAGCAAT
GTTTTGCTGAATTTTCCTCTCAAATGTATATGTTAAGAAATCTCAGTGGGTGTGAATCCAGTGTTAAATGCCTGAGAGAA
ATATGCTGGTAATGACTGTTTGATCAGTAGGGCCATCGAACCTTTCATTCTC--TGGGCTCAGCCAACCATAATCCTGTG
CAATTTCTGGTTTAAGCACTTACTAGTATTCTTGGTGTGTGGTTTAGGACTTATCAACTATTGGTGGTTAATCCCCGAAA
AATAAAAATATTAGAGGTCGATGTGTATAGCTTTTGGTTTCTTGTCATGATAAGTTTCATTAGTTACTCCTCAGTTGTTG
GAATGCTTATATATACATGGTTTGATCTGAATTCTGAGTGGGGTTCACTCATACCCTGTGGTGGTGTCAGTATTCTGTCA
GTAATTGGTTCTCTCCAGTGGGTTGTATGCTCGCTTCTTATCACCCCAATAGAATTTGTAGGTTCTCTTGGTAGTTGTTG
AAGAACAAATCTTTATTTTGACCTCCTTATATTGTGGATTGTATTTGTAAGAAACATGCACACGTTTGATAGATACGCTG
TGATATCGGCCTACTTGTTCGGCAAGTACTTATCTCCTTCACTTCTTGTACCCATTTTGCAGTTCATGGACAAATCA-TG
CAGCGTCATGGACTCATCTTCTATAACACATAAGTAGGCGCGCATGCCAGATTGATTCCTTCC-AGTACCTAGCTGATGT
TGTTTGTACCCAGACTACCCACAGTGCCTGATGAAGCTACAAGACC-GCAAACATACGGGACCTAGACGAGTCCACGGAG
AAACAACATCCTTGTGTATCTTGAGCTGCTTCATCACTTGATGGAACGAGACATGGTTGTGGGGAACACAGCAGGATTAG
CAAGTAATT-CGAGAGTAATCTTGTATGCGCCCTGGGCTCAGTTTGCGCCGCGATAAATTGTTTTCAACATGTAATACAT
TTGTTATATTCATGAGCCGTTGAGAACACAATGCTGAGTTGCCAAGAGAACCA-AAAAAGTG------------------
---TTTGTTCTAAACTGACTTCTACCGCCCTTAAAAAGCCC---TTTGATTACACCAAGGGTTAATCAAACTAAGCCTGC
TTAAAAAATTGCATCCCTATGCTTGAAAATTCAGTTCATATATATAAGCATTTCAAAATAATTCAGTAAAAACATGATGA
TACCAACTCGATATCTCAC--------------------------------------------GTGAGAGCAACCTTTTT
TTTGCCACATGCCAGGTGAGATG-CGAACTTGGCATACCTTCACCTT---------------------------------
-------TTGTGTGGGACCGTGGGAGAGTGCTAGG-------------------------TTTTGTGATCAACTCTAAAA
ATATCTGTGTATTCCCTTAAA-----------------------------------------------AAAAATATCTGC
CTAACATTTTTGGTGTTTCTCTTGTATGACGAAAGCGTATGCGTAATACTAC---------------------------T
ATGGGTCTGTTATTGTCGGACTGCGACATGTACAACACCAATAGAAAGCATGGAATCGAGCGGTCAAGAAACGGGTGAAT
GACTGAATTGTTGGTTGAATGAGACGGAGACATTTTTGTTTGAACTGGAATTAGATAGACTT-GGGTATGAACTCGGTGA
TGCGAGTTTCTTTCATCGCGAATTCTCGAGAATGCTCTGGTCTCCC----------------------------------
----------------TCCCGACGCGCCGGAG----------------------------------AATTAGCACGCTCG
CTCCGTTCTAAACTGCCTACCACTCAG-TTC-CCATGGATGCGAATCACGGCCAGTGGATGGATTGATACGTGAAACATA
TGCCAAAGGAACACGACGGTCTGCTACTCACGATCGTGCCCGTTCCATGTGGTCCGGTGGACCATCGCTCACTACGGCGT
TCTGCGCACTGCACGCCGGAGAC---------CAAATGCAATGCAAGCTAGCGAACCAATGGGCACCACCGCA-------
--CGGCATTCAGCAGTGGCATATCCTCGCTCCGGAGACCG
>chr6A_3225
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---TATCGGCCTACTTGTTCGCCAAGTACTGATCTCCTTCATTTCTTGTACCCATTTTGCAGTTCATGGACAAATCAATG
CAGCGTCATGGACTCATCTTCTATAGCACATAAGTAGGCGTGCATGCCAGATTGGTTCCTTCC-ACTGCCTAGCTGATGT
TGTTTGTACCCAGACTACCCATAGTGCCTAATGAAGCTTCAAGACC-GCAAA-----------TAGATGAGCCCATGGAG
AAACAACATCCTTGTGTATCTTGAGCTGCTGCATCACTTGATGGAACGAGATATGGT-GTCGGGAACACAGCAGGATTAG
CAAGTAATTTCGAGAGTAATCTTGTATGCGCCCTAGGCTCAGTTTACGCCGCGATAAATTGTTTTCAACATGTAATACAT
TTGTTATATTCATGAGCCGTTGAGAACACAATGCTGAGTTGCCAAGAGAACCAAAAAAAGTGTGGTACAAATCACCATCT
CTCTTTGTTCTAAACCGACTCCTACCACCAATCAAAAACATTAGTTCGATTACATCAAGGGTTAATCAAACTAAGCATGC
TCAAAAAGGTGCATCCCTATGCTTGAAAATTCAGTTCATATATGTA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS---S-------SS--S-------------S----S-SSSSSSS-----SS-----------------S---
--------S--------------SSSSSSSSSSSSS--S---------S-----S----------------S--------
--------------S-------------------SSS-----------SS------------------------------
-----S-S------S---------S----------S----S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------
--------------------------------------------------------------------------------
-------------------S--S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------SSSSSS--------------------------------------------------S-----------------
-----SS-------------------------------------------------------------------------
------------------------------------------------------------------S-----S-------
---S--S-SS-----SSSS---------------------S------SSS-S----S-----------------------
---S--S----S--------------------------------------S----------------------------S
---------------------------------------------------------------S----------------
-------------------S-----------------S--------------S--------S-----------------S
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------S-----
-S--------S--------------------------------------------S------------------------
-------------------S-------------------------S----------------------------------
-S-----S-----------------------------------------------SSSSS--------------------
--------------------S---------------S-------------------------------------------
---------------S----------------------------------------------------------------
------------S-------------------------------------------------------------------
-S------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S-------S--------------------
----------------SSSSSSS---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S-----------S-------S-----------------S----
---S----------------------------------------------------------------------------
-------------SS-----------------------------------------------------------------
---------------------------------------------------S----------S-----------------
--------------------------------------------------------------------------------
-----S------------------------------------S------------S-----S---S-SSS----------
-----------------S---------S---------------------S------------------------------
--------------------------------------------------------------------------------
---------------------------------------------SS---------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
--------S--S---S----------S-----------------------S-----------------------------
--------S-SSSSSSSS------------------------------------------S-------------------
-S------S----S----------------------S---------SSSSSS---SSSSSS--SSSS-S---S----S-S
SSSSS-S-SS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
--------------------------------------------------------------------------------
-------------S-SSSS---S-S--SSS--------------------------------------------------
--------------------------------------------------------------------------------
-------------S-----------------------------S------S-SSSSSSSS--------------------
--------------------S------S------SS-SS-S-----------S---------SSS------------SS-
------------------------S--S----------------------------------------------S-----
--------S--------S-----------------S-S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS----S----S-------------S-------------S--------------------------
----------SSSSSSSSSSSS-SS-SS---------------------------S------------------------
-----S---------------------------------S------------------------------S------S--
-------------------------SSSSSSS---------S--------------SS---------------SSSSSSS
SS------------S-------------------------
>forward_88
--------------------------------------------------------------------ACGCACGGGCAT
TTGTACTA------------------------------------------------------------------------
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----------------------------------------
>reverse_1926
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----CTGCAGAATCCGGATCCGAT-------------------------------------------------------
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----------------------------------------
>forward_400
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------AGACAGATCATTCGCCACCG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>reverse_2896
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------CAGCCTGACCGGTGTTTACA---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
>forward_2562
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------ATGACCACTGGACACGGT
TG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------
>reverse_4897
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------GTTGTGCGGGACGAAACATT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------
