>input_sequence_29951
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---------------------------------------------ATGGGCTGCGCCGGATCCACCCCTAAATCTGACGG
TCTCTCCTTTTACCCTGTCTATCTCGATTCTGTTAATGCTTTCTTAGGTGGGTTCATGATTGAGATCTTGGGCAATCTGG
TCCCCAGAACCACTATCAGAGTAGTGTCCTAGGTTCTTGATCCAGGCGCCTGTAACTGTTATGTCGATTTAGCCCTGCCT
GCTGTTGGTTGCGTAGCAGATTGGATTGATGATGCGTCGCTCCGGTAATTCAGCTGGGGGTAGCAGGGAGGGGA-ATTAG
TGCTGCTTATGGAATGCTCTATTATTTCCCATGTTATATTTGGTCATATGTGATCGTTCTGCTCCTGTTGGCAGTTAGCA
AAGTTCTAAAGGCCAAATTGAACAATCATTGGAACAAAGGAGCTGTTAATATCACCATGATCAACGTATCAGTGGTACAG
TACAATTTTAGGTGAAGAGAAGATATGTTTGTTATGAAAAAGCAATT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTGAGTATGA-C
AGAAATAATTATCGAGGACGGTGATGGGATTGTTGATTTATTCCTCCATAGAACAGAGTACCTAGCAACATTATTGAAGA
TGTGACACGACGAAAGACCTGTGGAAATGACGCTT-TTTTTTAGTGTAGGAAGGAAGACATTACTTTTTCGGGTTCAGTA
GTAGGAAATATGTCTGTTTTGGTAAGAAAAATGG-CCTTAAAATCAGTGTTAGTCCATGAGCATGTTTAAATGGGAGTGA
GATGACAATAGCAAAAGGAAACACTCTTCCTTGTGCAGTTTCTTTTAACTTCCTCGTCGAATACTGAGCTTGCCCAACTA
CTTTTCTTTAATACTCCCTCCGTTCCTTAATATAAGTCTTTTTAGAGATTTCAATACGAACTACATATGGATGTATATAG
ATATATTTTATAATGTAGATTCACTCATTTTGCTTCGTATGTAGTCCGCATTTGAATCTCTAAAAAGACTTATATTTAGG
AACGGAGGGAGTAGTTATTAAATGAACTGACATTGTGACAACCTTTCGTATTAGTTACACTAATTTCAACTGGTCAGCAA
GGTGTAAACTTGATGT-------GGTGGTGAAGATGAAATTTGTATTTCACGGTTCAGCAAATGAAGGGCGTTAACTAAC
TGATATAAAACAGGCCTCTGAAAAACAAATCCACTGATGAAACGGGCTTGTAGACAAGTAGCTTTGTTAAAAATCTTTGT
TATTAGTTATTGGAAGCCGAATTGTGTACTTCCGTTATTTTGTATACTTATGTGGTGTCTAAAACAACATGAGCCTGATT
CAGTTCAAGATAAACACAGTGCTTACTTGCTGTGAC-----------------------------------TGCATTTGG
ATATATTCAGTACTAACGCTTAACTTGTTTTTGTTGATCTCAGATAGCAGTAAGAAGCTGAAAAAACCAAAGCCTTGGAA
GCACACTCAGTCAATAACACCAGCACAACTCAAACAGATGCGCGAAGAATTCTGGGACACTACTCCTCACTATGGTGGAC
AGAAAGGTACTGTACAACTCTAATT-TTTGTAGTACTGTGAACATTTATCTGCAAGCGATTTATACTGCTTGCCGGACCA
GTTCCTTTT--------TGAACTTTGACCTAACTTTACTAAATCTGTATGCAGTTTTTTTTAAATGGTCTGTATGCAGAT
TTGT-CACTGAAATCTGTACTAGA----TATGCAGTTTGTTACATTAAACTTTTGAAGTACATGTATACTTATAGTGTTG
ATTTGCTGTTTTGCTAGTTTAGTCCATTGTTGATGTTAAATTGGGCACGTTAAATTATAGTCCTTGAGGAGGAAACAAAT
ATGAAGGGATTGCCAAACAGAAGTTGGCATGTGTTGTACTCCCTCCGTTTAC--ATATAAGATGTTTTT-ATATTTCAAT
ATGAACTACATACGGACTGAAATGAGCGAAGAAACGCACTAAAACGTGTCTATATACATCCGATTCAAAA-ATAAGTTGC
TCCCTTCGATCCATATTAATTGTCACTGATTTAGTACAACTTTGTACTAAATTAGGGACAATTAATATGGATCGGAGGGA
GTAGAACATCTTATATTTGTGAACGGGGGGAGTAGATTTTATTGATACAAATTTCCTTGTACTATGGACATTGCCGCAGG
TTCTTTGTTGGGATGGACTATGCAAATTCTTTAAATATCTACTTAACATTTAGCATATTTTATGTTTGTTTGGTCGAGCG
AAGGGTTGGTCTGAGCCATATCTTGAACTGTTGTTTTATCATATGCATGGAATTCATGTTTGTTG-TTTTTTGATAATGC
GCTCTTAATTTGCTTACAACCAAACAGTTGAAGAAGCAGT-GATATTCTAATTTGAACTAAAAACCACAATCCGTTTCCA
TTCAGAGATCTGGGATGCACTTCGGGCCGCTGCAGAAGCTGATTTAGCACTTGCGCAAACCATAGTAGACAGTGCTGGCA
TCATTGTCTCAAATTCTGACATGACACTCTGCTACGACGAAAGAGGTAAAATTATTATTTTTCCTTGTATCGCATGCATC
TTCTCCACCGCCCTGTGCTTTCAGAACCAAAATCAGTGGCTGGGAAACTCTGCTGCAGGTGCCAAATACGAACTACCAAA
GTACGTTCTGAGCGAGCCGACTAATTTGATCCGGGAGAAATGA-------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------
>chr3A_1_TraesCS3A01G281600
CATCGGCCCTGGCGGTAGGGTTAGAAGGCTACCACCGAGATTAGTGGCGGTAGCCCTTTGGCTGA-TAGGCATGACTGAG
GGGCGTGAACCGCGGTTTACCACCATTGTCCCCGGCGATATCCCATGTAGCCTATCGCTGATGTATATGACGGTAGCAAA
AAGATCATATTCGGCTAAACATACAAAATGGGGTCCAATTGCCCTCCTCTTTCGTTAAAAGGTTGAGATAATGATTTTGG
CCAAGGTGTGCACTCAAGTAGACCCCGATAAACCGCTTCTTCTCCAAATGCCTCTATG--AAAGGG-GGGGGGCTGGTCT
TGCCCTCCAGTGGTTTTTCTGAAACTTAACACTGATACTTCTTTTGACCATGACCTGCTCAGGGGCATGATGGGGGTTGT
CCTTAGAGATGACAGAGGCAAATTTATTGTTGGGGGAAATGGGAAGATAGACTACTGCGCGGGTGTCTTGACCGCTGAAG
CTTTGTCTTTCAAATTCAGAC----------------------------------TATTATTAACTCGAACAATCTGAAC
ATGATTGATACCATGAAGGATGGAGGACGGTCGGCGGGTGCAGCGAAAGCTATTTTTTATGATTGTTTT-ATTATGCTTG
TGATTTTATTATTACTAGGTACGAGTAC--TAACAGAGAAGCAAATAAAGTTTGATCACGAGCTCGCTAGATTAGTTAGA
TTTTCTTAGACTTTTGAATTGTTTGAGGAGCCCTTAAATGAAATTGTGACAACCCTCATAAATG----------------
--------------------AAAAACAAAAGTAGACCCCGGTAAAGAACAGCACCGCATGGGTACCAGCTATACTCGCAC
CTGCTTTTGTTGGCTAGCATAGCCACAT-------CCTGACAGGCTGACACGTCCATCCTCCACTCCTGCTCCGCTTTCG
G-TTTTCAGTCCACCTCCCTCTCTTGTATCGACCCTGCAGTCCAGAGCCCAGACGCGTGAGCCACCTCCGCTTCCAGTAG
CTTCTCGAAGAGAGGTCGCCGATGACCGTCTGATCGTCCGTCGCCATGGGCTGCGCCGGATCCACCCCTAAATCTGACGG
TCTCTCCTTTTACCCTGTCTATCTCGATTCTGTTAATGCTTTCTTAGGTGGGTTCATGATTGAGATCTTGGGCAATCTGG
TCCCCAGAACCACTATCAGAGTAGTGTCCTAGGTTCTTGATCCAGGCGCCTGTAACTGTTATGTCGATTTAGCCCTGCCT
GCTGTTGGTTGCGTAGCAGATTGGATTGATGATGCGTCGCTCCGGTAATTCAGCTGGGGGTAGCAGGGAGGGGA-ATTAG
TGCTGCTTATGGAATGCTCTATTATTTCCCATGTTATATTTGGTCATATGTGATCGTTCTGCTCCTGTTGGCAGTTAGCA
AAGTTCTAAAGGCCAAATTGAACAATCATTGGAACAAAGGAGCTGTTAATATCACCATGATCAACGTATCAGTGGTACAG
TACAATTTTAGGTGAAGAGAAGATATGTTTGTTATGAAAAAGCAATT---------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------GTGAGTATGA-C
AGAAATAATTATCGAGGACGGTGATGGGATTGTTGATTTATTCCTCCATAGAACAGAGTACCTAGCAACATTATTGAAGA
TGTGACACGACGAAAGACCTGTGGAAATGACGCTT-TTTTTTAGTGTAGGAAGGAAGACATTACTTTTTCGGGTTCAGTA
GTAGGAAATATGTCTGTTTTGGTAAGAAAAATGG-CCTTAAAATCAGTGTTAGTCCATGAGCATGTTTAAATGGGAGTGA
GATGACAATAGCAAAAGGAAACACTCTTCCTTGTGCAGTTTCTTTTAACTTCCTCGTCGAATACTGAGCTTGCCCAACTA
CTTTTCTTTAATACTCCCTCCGTTCCTTAATATAAGTCTTTTTAGAGATTTCAATACGAACTACATATGGATGTATATAG
ATATATTTTATAATGTAGATTCACTCATTTTGCTTCGTATGTAGTCCGCATTTGAATCTCTAAAAAGACTTATATTTAGG
AACGGAGGGAGTAGTTATTAAATGAACTGACATTGTGACAACCTTTCGTATTAGTTACACTAATTTCAACTGGTCAGCAA
GGTGTAAACTTGATGT-------GGTGGTGAAGATGAAATTTGTATTTCACGGTTCAGCAAATGAAGGGCGTTAACTAAC
TGATATAAAACAGGCCTCTGAAAAACAAATCCACTGATGAAACGGGCTTGTAGACAAGTAGCTTTGTTAAAAATCTTTGT
TATTAGTTATTGGAAGCCGAATTGTGTACTTCCGTTATTTTGTATACTTATGTGGTGTCTAAAACAACATGAGCCTGATT
CAGTTCAAGATAAACACAGTGCTTACTTGCTGTGAC-----------------------------------TGCATTTGG
ATATATTCAGTACTAACGCTTAACTTGTTTTTGTTGATCTCAGATAGCAGTAAGAAGCTGAAAAAACCAAAGCCTTGGAA
GCACACTCAGTCAATAACACCAGCACAACTCAAACAGATGCGCGAAGAATTCTGGGACACTACTCCTCACTATGGTGGAC
AGAAAGGTACTGTACAACTCTAATT-TTTGTAGTACTGTGAACATTTATCTGCAAGCGATTTATACTGCTTGCCGGACCA
GTTCCTTTT--------TGAACTTTGACCTAACTTTACTAAATCTGTATGCAGTTTTTTTTAAATGGTCTGTATGCAGAT
TTGT-CACTGAAATCTGTACTAGA----TATGCAGTTTGTTACATTAAACTTTTGAAGTACATGTATACTTATAGTGTTG
ATTTGCTGTTTTGCTAGTTTAGTCCATTGTTGATGTTAAATTGGGCACGTTAAATTATAGTCCTTGAGGAGGAAACAAAT
ATGAAGGGATTGCCAAACAGAAGTTGGCATGTGTTGTACTCCCTCCGTTTAC--ATATAAGATGTTTTT-ATATTTCAAT
ATGAACTACATACGGACTGAAATGAGCGAAGAAACGCACTAAAACGTGTCTATATACATCCGATTCAAAA-ATAAGTTGC
TCCCTTCGATCCATATTAATTGTCACTGATTTAGTACAACTTTGTACTAAATTAGGGACAATTAATATGGATCGGAGGGA
GTAGAACATCTTATATTTGTGAACGGGGGGAGTAGATTTTATTGATACAAATTTCCTTGTACTATGGACATTGCCGCAGG
TTCTTTGTTGGGATGGACTATGCAAATTCTTTAAATATCTACTTAACATTTAGCATATTTTATGTTTGTTTGGTCGAGCG
AAGGGTTGGTCTGAGCCATATCTTGAACTGTTGTTTTATCATATGCATGGAATTCATGTTTGTTG-TTTTTTGATAATGC
GCTCTTAATTTGCTTACAACCAAACAGTTGAAGAAGCAGT-GATATTCTAATTTGAACTAAAAACCACAATCCGTTTCCA
TTCAGAGATCTGGGATGCACTTCGGGCCGCTGCAGAAGCTGATTTAGCACTTGCGCAAACCATAGTAGACAGTGCTGGCA
TCATTGTCTCAAATTCTGACATGACACTCTGCTACGACGAAAGAGGTAAAATTATTATTTTTCCTTGTATCGCATGCATC
TTCTCCACCGCCCTGTGCTTTCAGAACCAAAATCAGTGGCTGGGAAACTCTGCTGCAGGTGCCAAATACGAACTACCAAA
GTACGTTCTGAGCGAGCCGACTAATTTGATCCGGGAGAAATGAATTCATAGACCACGAAGGATTCGTGTAAATCATGTAA
ATCTCATTTGTTCGGCAACTTTAGTCTTTACTTGCTCAAAACTTCAATGGAG-ATGCCACATTCGGTTTACAGTTCTGGT
CTGAGTTGTTATGGACTTGTAGTGCTCGCATCTCTTTCTAGGCCGACACCTGAGTATGGTACACTGAGCTGTCGAAACCC
AGAAATAGGAAAAATATAGAATGGCAATGTTATATGTTTTTTTCAAGACAAATTGCAATGTTATATGTACATTTTTTTAG
GCAA-----------------------------GTGTTGTATGTATACTTTTTTTTGAGTGCTATGTTTCTTTTTTTGAG
CTTTGAGTGCTATTTATATGTATACTTGAGATGAATAGATTGAAAGTTTCTCGTAAAAAAAAG-----------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GTATACTTGAGATGAAGGAATACCTACGGG-TAGGCCCAAGTATACGCCCCAGTCAAAGGCCCAGGCCCAGGTCCATCAA
GATTACAGCCCAAGAGGCCCTCAAGCAACCGTTCGCTGGTGGACTAAGTGTCTTAAGTCGGATTCCATCCCTCCAATAGA
GCAAGGACCGTCAGCCGGTCGCCCTCCCAGGCTGGTATAGCAGACAAATGTCTTACGCCAACTCCACTGCGCGACCCTAT
TTTGTCCGTCCCCGTTTGTTTGGGGTAAAACAGACAAACGAGGCGGCCCAGCGCGAGGGAGCAAACAGACTTTTGTTCAT
TTTGTGTCCGCTTTCAACCCATTCGCGGTCCAAATTTGCGTCGCTTTTGGGGTGAAACGGACACCACGCGGACGCGCGGG
CCGTCTGCGTGTGTCCTCTCCTGGCCCGTCCGTCGGTGGCACAGGGCGGGTCTTTTTCTATCCGTCCCCTCCCTCTCTTC
GACCGCACCCCCTCCACTCTTCCCCTCGCTGCCGTCGTCGCCGCTGCTGCCATTGCAGCCTTGCAGTTCGGACACGCGCT
CGCCAGCCCCTTTCCCTCGGCGCCGCTGAGCTACCCAACCACGGCCACCT
>chr3B_1
CATCGGCCTTGGCGGTAGGGTTAGAAGGCTACCGCCGGGATTAGTGGCGGTAGCCCCTTTGCCCGGTAGGCACGACTGAG
GGGCATGAACCGGGGTTTACCACAGTTGTCCCCGGTGGTATCCCATGTAGCCCATCGCCGATGTATATGACGGTAGCAAA
AAGATCATATTCGGCTAAACATACAAAGTGGTGTCCAATTGCCCTAAACTTTTGCTAAAAGGTTAAGATAATGATTTTGG
CCAAGGTGTGCACTCAAGTAGACCCCGATAAACTGCTTCTTCTCTAAATGCCTCTATAAAAAAGGG-GGGGGGCTGGTCT
TGCCCTCAAGTGGGTTTTCTGAAACTTAATGTTGATGCTTCTTTTGACCTAAA---------------------------
--------------------------------------------------------------------------CTGAAG
CCTTGTCTCTCAAATTCGGACTATCGCTGACGAAAAGGTCGGGATGCAATCATCTTATTATTAACTCGGAGAATCTGGAT
GTGATTGATACCATGAAGGATGGAGGATGGTCGGCGGGTGCAGCGGCGGTTATTTTTGACGATTGTTTTCATTATGCTTG
TGATTTTATTATTACTAGATTCGAACGCTATAACAAAAAAGCAAACAAAGTTGTC-CACGAGCTCGCTAGATTAGCTTGA
TATTCTTTGACTTCTGATTTGCATGAGGAGCCCTTAAATGAAATTGTAACAAT---------------------------
------------------------ACAAAAGTAGACCCCGGTAAAGAACAGCACCGCATGGGTACCAGCTATACTCGCAC
CTGTTTTTGTTGGCTAGCATAGGGCATAGCCACAACCTGACAGGCTGACACGTCCATCCTCCACTCCTGCTCCGCCTTCG
TCTTTTCAGTCCACCTCCCTCTCCTGCATCGACCCTGCAGTCCAGAGCCCGGAAGCGTGAGCCACCTCCGCTTCCAGGAG
CTTCTCGAAGGG-GGCCGCCGATGACCCTCTGATCGTCCGTCGCCATGGGCTGCGCCGGATCCACCCCTAAATCTGACGG
TCTCTCCTTTCACTCCGTCTATCTCGATTCTGTTAATGCTTTCTTAGGTGGGTTCATGATTGAGATCTTGGGCAATCTGG
TC-------CCACTATCGGAGTAGTGTCCTAGGTTCTTGATCAAGGCGCCTGTAACTATTATGTCGATTTAGCCCTGCCT
GCCGTTGGTTGCTTAGCAGATTGGATTGATGATGCGTCGCTGCGGTAATTCAGCTGGAGGTAGCAGGGAGGGGGGATTAG
TGCTGCTTATGGAATGCTGTATCATGTCCCATGTTATATTTGGTCATATGTGATCGTTCTGCTCATGTTGGCAATTTGCA
AAGTTCTAAAGGCCAAACTGAACAATTATTG-------------------------------------------------
-------------GAAGAGAGGATATGTGTGTTATGAAAAAGCAATTGATAGGTGACCTATTCTCCATTTGTACTGTGAA
GTACTCCCTCCGTCCCAAAATTCTTGTCTTAGATTTGTCTAGATACGGATGTATCTATTCATGTTTTAGTGTAAGATACA
TCCGTATCTAGATAAATCTAAGACAAGAATTTTGGGACGGAGGGAGTAACAGGTTTAACATCCAATTAGTGAGTATGA-C
AGATATAATTATCGAGGAAGGTGATGGGACCGTCGATTTATTCCTCCGTAGAACAGAGTACCTAGCAACATTATTGAAGA
TGTGACACGACGAAAGACCTACCGAAATGACGTG--TTTTTTACTGTAGGAGGAAAGACATTACTTTTGGGGGTTCAGTA
GTAGAAAATATGTCTGTTTTGGTAAAAAAAAATGTCCTTAAAATCAGTGTTTGTCCGTGAGCATGTTTAAATGATAGTGA
GATGACAATAGCAAAAGGAAACACTCTTCCTTATGTAGTTTCTTTTAACGTCCTCGTCGGATACTGAGCTTGCCCAACTA
CTTTTCTCTAATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GTTATTAAATGAACTGACATTGTGCACAACCTTCGTATTAGTTACACGAATTTCAACTGGTCAGCAA
GGTGTAAACTTGAAATGTGTCAAGGCGGTGAAGATGAAATTTGTATTTCACGGTTCAGCAAATGAAGGGCGTTTACTAAC
TGATATAAAACAGGCCTCTGAAAAACAAACCCACTGATGAAACAGGCTTTTAGACAAGTAGCTTTGTTAAAAATCTTTGT
TATTAGTTATTGGAAGCCAAATTGTGTACTTCCGTTATTTTGTATACTTATGCAGTGTCTAAAACAACATGAGCCTGATT
CAGTTTAAGATAAACACAGTGCTTACTTGCTGTGAC-----------------------------------TG-------
----------------------------TTTTGTTGATCTCAGATAGCAGTAAGAAGCTGAAAAAAACAAAGCCTTGGAA
GCACACTCAGTCAATTACACCAGCACAACTCAAACAGATGCGCGAAGAATTCTGGGACACTACTCCTCACTATGGTGGAC
AGAAAGGTACTGTAGTACTGTACAACTTTGTAGTACTGTGAACATTTATCTGCAAGCGATTTATACTGCTTGCTGGACCA
GTTCCTTTTTCATGCTCTGAACTTTGACCTAACTTTACTAAATCTGTATGCAGTTCTTTTTAAATGGTCTGAATGCAGAT
TTGTACACTGAAATCTGTACTAGATCAGTATGCAGTTTGTTACATTAAACTTTTGAAGTACATGTACACTTATAGTGTTG
ATTTGCTGTTTTGCTAGTTTAGTCCACTGTTGATGTTAAATTTAACATGTTAACTTATAGTCCTTGAGGAGGAAACAAAT
ATGAACGGATAGCCAAACAGAAGTTGGCATGTGTTGTACTCCCTCCATTCACAAATATAAGATGTTTTGGATATTTCAAT
ATGAACTAGATATGGGCTGAAATGAGCGAAGAAACACACTAAAACGTGTCTATATACATCCGATTCAAAATATAAGTTAC
TCCCTTTGATCCATATTAATTGTCGCTGATTTAGTACGACTTTGTACTAAATTAGGGACGACTAATATGGATCGGGGGGA
GTAGAACATCTTACATTTGTGAACGGAGGGAGTAGATTTTATTGATGCAAATCTCCTTGTACTATGGACATTGCCGCAGG
TTCTTTGTTGGGATGGACCGTGCAAATTCTTTAAATATCTACTTAACATTTAGCATATTTTATGTTTGTTTGGTCGAGCG
AAGGGTTGGTCTGAGCCATATGTTGAACTGTTGTTTTATCATATGCATGGAATTCATGTTTATTGTTTTTTTGATATTGC
GCTCTTAATTTGCTTACAACTAAACAGTTGAAGAAGCACTAGATATTCTAATTTGAACTAAAAACTACCATCCGTTTCCA
TTCAGAGATCTGGGATGCACTTCGGGCCGCTGCAGAAGCTGATTTATCTCTTGCGCAAACCATAGTAGACAGTGCTGGCA
TCATTGTCTCAAATTCTGACATGACACTCTGCTACGACGAAAGAGGTAAAAAAAAA-----TCCTTGTATCGCATGCATC
TTCTCCACCGTCCTGTGCTTTCAGAACCAAAATCAATGGCTGGGAAACTCTGCTGCAGGTGCCAAATACGAACTACCAAA
GTACGTTCTGAGCGAGCCGACTAATTTCATCCGGGAGGAATGAATTCATAGACCACGAAGGATTCGTGTAAATCATGTAA
ATCTCATTTGTCCGGCGACTTTAGTCTTTACTTGCTCAAAACTTCAATGGAG-ATGCCACATTCAGTTTACAGTTCTGGT
CTGAGTTGTTATGGACTTGTAGTGTTCGTATCTCTTTCTAGGCCGACACCCGAGTATGGTACACTGAGCTGTCGAAACCC
AGAAATAGGAAAAATATAGAATTGCAATGTTATATTTTTTTC---AGACAAATTGCAATGTTATATGTACATTTATTTAG
GCAAATTTTATGTGTAC----TTTTTTTTAGAAGTGTTATATGTATACTATTTTTTTGAGTGA-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------TATGTTATAT
GTATACTTGAGAGGAA----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>chr3D_245
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----GTGTGCACTCAAGTAGACCCTGATAAACTGCCTCTTCTCCAAAGGCCTCTATG--AAAGGGAGGGGGGCTGGTCT
TGCTCTCCGGTGGGTTTTCTGAACCTTACTGTTGATGCTTCTTTTGACCATGACCTGCTCAGGGGCACGATGGGGGCTGT
CCTTGGAGATGACAGAGGCAAATTTATTGCTGGGA-AAATGGGAAGATAGACTACTGCGCGGATGTCTTGACCGCTGAAG
CCTTACATCTCAAATTTGGACTATCGCTGACGCAAAGGTCGGGATGCAATCGTCTTATTATTAACTCGGACAATCTGAAC
ATGATTGATACCATGAAGGATGGAGGATGGTGGGCGGGTGCAGCGGCGGCTATTTTTGATGATTGTTTTCATTATGCTTG
TGATTTTATTATTACTGGGTTCCAACACTATAACAGAGAAGCAAATAAACTTGC-TCATGAGCTCGCTAGATTAGTTAGA
TTTTCTTTGACTTCTGATTTGTTTGAGGAGTCCTTAAATGAAATTGTAACAACCCTCATAAGTGATGTATTGGTTATTTA
TAAATTTCGTGTTTATATTTAAAAACAAAAGTAGACCCCGGTAAAGAACAGCACCGCATGGGTACCAGTTATGCTCGCAC
CAGTTTTTGTTGCCTAGGATAGCCACAT-------CCTGACAGGCTGACACGTCCATCCTCCACTCCTGCTCTGCTTTTG
G-TTTTCAGTCCACCCCCCTCTCCTGCATCGACCCTGCAGTCCAGAGCCCGGACGCGTGAGCCACCTCCGCTCCTAGTAG
CTTCTCGAAGGAAGGCCGCCGATGTCCCTCTGATAGTCCGTCGCCATGGGCTGCGCCGGATCCACCCCTAAATCTGACGG
TCTCTCCTTTTACTCTGTCTATCTCGATTCTGTTAATGCGTTCTTAGGTGGGTTCATGATTGAGATCTTGGGCAATCTGG
TCCCCAGAACCACTATCGGAGTAGTGTCCTAGGTTCTTGATCAAGGCGCCTGTAACTATTATGTCGATTTAGTCCTGCCT
GCTGTTGGTTGCTTAGCAGATTGGATTGATGATGCGTCGCTGCGATAATTCAGCTGGAGGTAGCAGGGAG-GGGGATTAG
TGCTGCTTATGGAATGCTGTATGACGTCCCATGTTATATTTGGTCATATGTGATCGTTCTGCTCCTGTTGGCAGTTAGCA
AAGTTCTAAAGGCCAAACTGAACAATCATTAGAACAAAGGAGCTGTTAATA---CCATGATCAACGTATCTGTGGTACAG
TACAATTTTAGGTGAAGAGAGGATATGTGTGTTATGAAAAAGCAATTGATAGGTGACCTATTCTCCATTTGTACTGTAAG
--------------------------------------------------------------------------------
---------------------------------------------GTAAAAGGTTTAACATCTATTTAGTGAGTATGACC
AGATATAATTATCGACGAAGGTGATGGGACTGTTGATTTATTCCTCCGTAGAACAGAGTACCTAGCAACATTATTGAAGA
TGTGATGTGACGAAAGACCTATCGAAATGATGGGGTTTTTTTACAGAAGGAGGAAGGACATTACTTTTTGGGGTTCAGTA
--AGGAAATATGTCTCTTTTGGTAAGAAAAATGG-CCTTAAAATCAGTATTGGTCCATCAGCATGTTTAAATGGGAGTGA
GATGACAATAGCAAAAGGAAACAGTCTTCCTTGTACAGTTTCTTTTAACTTCCTCGTTGAATACTGAGCTTGCCCAACTA
CTTTTCTCTAATA-------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------GTTATTAAATG---------------------------------CACTAATTTCAACTGGTGAGAAA
GGTGT---------------CAAGGTGGTGAAGATGAAATTTGTATTTCACGGTTCAGCAAATGAAGGGCGTTAACTAAC
TGATATAAAACAGGCCTCTGAAAAACAAACCCACTGATGAAACGGGTTTGTAGACAAGTAG-------------CTTTGT
TACTAGTTATTGGAAGCCGAATTTTGTACTTCCGTTATTTTGTATACTCATGTGGTGCCTAAAACAAGATG-GCCTGATT
CAGTTTAAGATAAACACAGTGCTTACTTGCTGTGACTGCATTTGGATATATTCAGTTACTAACGCTTAACTTG-------
----------------------------TGTTGTTGATCTCAGATAGCAGTAAGAAGCTGAAAAAACCAAAGCCTTGGAA
GCACACTCAGTCAATAACACCGGCACAGCTCAAACAGATGCGCGAAGAATTCTGGGACACTACTCCTCACTATGGTGGAC
AGAAAGGTACTGTACAACTCTAATT-TTTGTAGTACTGTGAACATTTATCTGCAAGTGATTTATACTGCTTGCTGGACCA
GTTCCTTTTTCATGCTCTGAACTTTGACCTAACTTTACTAAATCTATATGCAGTTTTT-TTTAATGGTCTGTATGCAGAC
TCGTACATTGAAATCTGTACTAGATCAGTATGCAGTTTGTTAGATTAAACTTTTGATGTACATGTACACTTATAGTGTTG
AT-TGCTGTTTTGCTAGTTTAGTCCACTGTTGATGTTAAATTTGACATGTTAACTTATAGTCCTTGAGGAGGAAACAAAT
ATGAAGGGATTGCCAAACAGAAGTTGGCATGTGTTGTACTCCCTCCGTTCACAAATATAAGATGTTTTGGATATTTCAAT
ATGAACTACATACGGACTGAAATGAGTGAAAAAACACACTAAAACGTGTCTATATACATCCGATTCAAAA-ATAAGTTAC
TCCCTTCGATCCATATTAATTGTCGCTGATTTAGTACAACTTTGTACTAAATTAGAGACAATTAATATGGATCGGAGGGA
GTAGAACATCTTACATTTGTGAACGGAGGGAGTAGATTTTATTGATACAAATCTCCTTGTACTATGGACATTGCTGCAGG
TTCTTTGTTGGGATGGACCGTGCAAATTCTTTAAATATCTACTTAACATTTAGCATATTTTATGTTTGTTTGGTCGAGCG
AAGGGTTGGTCTGAGCCATATCTTGAACTGTTGTTTTATCATATGCATGGAATTCATGTTTGTTG-TTTTTTGATAATGC
GCTCTTAATTTGCTTACAACCAAACAGTTGAAGAAGCACTAGATATTCTAATTTGAACTAAAAACTACCATCCGTTTCCA
TTCAGAGATCTGGGATGCACTTCGGGCCGCTGCAGAAGCTGATTTATCTCTTGCGCAACCCATAGTAGACAGTGCTGGCA
TAATTGTCTCAAATTCTGACATGACACTCTGCTACGATGAAAGAGGTAAAATTATTATTTTTCCTTGTATCGCATGCATC
TTCTCCACCGCCCTATGCTTTCAGGACCAAAATCAATGGCTGGGAAACTCTGCTGCAGGTGCCAAATACGAACTACCAAA
GTACGTTCTGAGCGAGCCGACTAATTTGATCTGGGAGGAATGAATTCATAGACCACGAAGGATTCGTGTAAATCATGTAA
ATCTCATTTGTTCCGCGACTTTAGTCTTTACTTGCTCAAAACTTCAATGCAGAATGCCACATTCGGTTTACAGTTCTGAT
CTGAGTTGTTATGGACTTGTAGTGCTCGCGTCTCTTTCTAGGCCGACACCTGAGTATGGTACACTGAGCTGTCGAAACCC
AAAAATAGGAAAAATATAGAATTGCAATGTTATATGTTTTTTTC-AGAAAAGTTGCAATGTTCTATGTACATTTTTTTAG
GCAAATGTTATATGTATACTTTTTTTTTGAGAAGTGTTATATGTATACTTTTTTTAGAAGTGTTATATGTACTTTTTTTT
AGTGCTATG----TTATATGTATAATTTTTTTTCGAGAAAACATCTGTAATTTTATTCATACTCATAACAATTATAGGTA
CACTGATTCGGATTTAAGATCCAAGCAAATACAAAGTGACTCCTATGACTAAGAATTACAATGAAATTTCTTGAAAACAT
CTTCTTTGATGCATCAATCTCTGTTAGAAGAAACTCTCCAAAGACTTCGGTTAAAAGGCTGCAATTGGGCTATGTTATAT
GTATACTTGAGATGAAGGAATACCTACGGGGTAGGCCCAAGTATATGGCCGAGCCAAAGGCCCAGGCCCG------TCAA
GATTACAGCCCAAGAGGCCCTCAAGCAACCGTTCGCTGGTGG--------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
>SNPs
--------S------------------------S---S------------------S--S--SSS-------S-------
----S-------S----------SS----------S-S--------------S-----S---------------------
---------------------------S---S-------------SSS----S-S---------S---------------
---------------------------------S----------------------------------------------
-------------S---------------SSS----S------------------------------S--------S---
----S------------------------S----SS--------------------------S-----------------
-S------S--------S--------------------------------------------------S-----------
---------------------------S-----------------SSS---------S----------------------
--------------------S---SS--------------------------SSS-------------------------
-------S-----S---S-----------------------------S-------------S------------------
--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-----------------------S--S-----------------------S-----------------------------
----------S----S-----------S----------------------------------------------------
-------------S------------------------------------------------------------------
-----------------S------------------------S--------------S----------------------
------------S----------------------------S---------------S---------------S------
------------------S---S--S------------------------------------------------------
-----------------S---------------------------------SSS----------------S---------
--------------------S-------S---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---S--------------S----------S-----------------S--------------------------------
--------------------S-S---------SSS--------S-------S-S---------------S----------
---------------------------------------------------S----------------------------
--------------------------------------------------------------------------------
-------S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------------------------SSS-S-S------------------------------------
-------------SS-----------------------------------------------------------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
-----S-------------------------------------------------------------------SSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------------------------------------------------
------------------------------------------------------------------S-------------
--------------------------S---------------S-S--S-----S--------------------------
-------------------------------------------------S------------------S-----------
-----------------------------------S------------------------------------------S-
------------------------S-------------------------------------------------------
-------------S------------S-------------------------S---------------------------
------------------SS------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S--------------------------S--S-----------
----------------------------------------------S-S-------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--------------------------------------------
-------------------------------------S------------------------------------------
----------------S---------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------S-----------------------------------
--------------------------------------S-------------------SSSS-SSSS-SSSS-----SSS
SS-SSSS--SSSS-----------S--SSSS-SSSSSS-SSS-SSSS-SS-SS--SSS-S-SS-----------------
--------------------------------------------------------------------------------
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---------------------------------------------S-S--S--S---------------SSSSSSS----
------------------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_206
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--------------------------AATGGGGTCCAATTGCCCTC----------------------------------
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>reverse_2430
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-----------------------------TCCACTGATGAAACGGGCTT-------------------------------
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>forward_1790
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----------ATCGAGGACGGTGATGGGAT--------------------------------------------------
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>reverse_3727
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----------------------------------------------GCACTTGCGCAAACCATAGT--------------
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>forward_1874
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--------------AGACCTGTGGAAATGACGCT----------------------------------------------
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>reverse_3876
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-----------------------------------GTGGCTGGGAAACTCTGCT--------------------------
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>forward_2210
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------------------------------TGCTTCGTATGTAGTCCGCA------------------------------
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>reverse_3958
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-------------------------------------AAATGAATTCATAGACCACGAAGGA------------------
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>forward_2634
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-----------------------------------------------------GTGCTTACTTGCTGTGACTGC------
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>reverse_4785
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----------------------------------------------------------------CACTGCGCGACCCTAT
TTTG----------------------------------------------------------------------------
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--------------------------------------------------
