>input_sequence_29904
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----------------------------------------------------------ATGGAAAGGAAGGCTGGAATGA
TACTGGATGAACATGTTCTGAAAGCTAATGATCGCAAGAGGAAACATGAGTCTGCTGTGAAGATTACTGGCACAGATGAT
TCTGCTGAGGTCTCTCAGCATGCTGATGGTTCTGCTGCCCTTAAGAAGTCTAAAATGACCTCTTGTGCTGGCCATATTCT
GGAGTGGTATAAGAACTTCAAGACAAGCGGGTTGCCGGTGCGTGTGCTTTGTTACCACCAGGGTAAATGGAGGGATTTTC
CAGAGCATGTTGTGAATCTGGTACAGCAGGACTTCAAGTTGAAGAGGCCAATTACTAATGCTGTATTCAAGAACCAGCAA
GTCCTGTTGGACTTTATGCACATGGTCTGCATTGATTCTTCAATGACCACAAACAAGCCAATAGCATGGATTGATGTTCA
TGGTAACCGCTTCTTTCCAGAGTTATGTGCTGGACTGGTAACATCTAAACCATCTCAGCATGGGAAAAGTGACCCCAGTG
GTAAATCTGAAGCTGGTGAGTGTGCTGGGACTTTGATTTTAACAGCTGGAGCTGAAAGCTCGAGTTCAGATTCTGTTGAT
GCAGTACTCCCTCATGCTAAGAAGGT------------------------------ACATAATTATGCTGCTGTTGAAAA
TAAAGCTGGTCCTGCAATCTGTTTGAAGGAATCTGCTAGTGGAAACATACATGCTGCTACTTGTAAGCAGAAAATTGGCC
AACCTGTTGATTCAGCTGTGCGCAAATTATTACTTGAAGGGGCAGGCCAACCTTTTAGTGAAGAAAATATTGTTGGGATC
TACAGAACCCCACTGGTAGATCAGCAAGGGCGGGCTCGCTTCAATCTTTTCCAGAAGGAACTTGAAGTCACCAAAATGCA
TCGTGGGAATGCAAATGTGCGCTATGCGTGGCTACCTTGTTCCAAGGATGCTATGGAGGAGATGATGATGCGTGGTGTTC
TGGAAGTTACAAAACCAATGCTGGGGCCAATGTATGGCATTGGTACACATCTTGCTCCAGCGAACTGCGCCAAAACTTGG
TAAACACTTGTTCTGTTTCTGATTAATCTATGCATGTTAATCT---AAACTTTAGGCCATACGTCCATCTGTTCAAAAAA
ATTCACTGCAACAAATAGAATATTTGTTTGTATATATGCATCTTTAGGTTTTCTGCTGGATTGTTCTTGCTTTGAATATT
----------------------------------CAGTGGTTTCTTATGATCTTACTTGATTATTTTTCCACAGTGCCAG
CTACTCAGATATTGACGAAAATGGCATCATGAGGATGATGCTGTGCCGTGTTATAATGGGGAATGTTGAGGTTGTACTTC
CTGGATCAAAGCAATTCCAGCCAACCAATGAAAGATTTGATAGTGGCGTGGATGATCTTCAAAAGCCAAAGCACTATGTC
ATATGGGATGCTAATGTGCATCGACACATCTATGCTGAATATGCTGTTGTTATCAAAGCACCTTCCATGACCAATGGT--
-ACTACAGCC---ACTCTCATGGTTCTTGATTTTATCTGTCTTTCCATTTTTCATT-TTTACTTCTGTGTTGTTTACACA
AGAGAATTCATTTAATATTACTGCAGAATACATGGCTAGAGAAGATACTGCATCCAACGTATCTGAGATAAGAAATTCTG
GTTCAGCAGAAAGTGTAATCAAGGTATTCCTATTATGTTTAACTGGTTACAATCATATCTCAGCTTTGGTACACATTGTG
TCTTGAATGGACAGCATGTTGATACCCCACACGTATAGACTGCTGCATGTTTGGTGTGTATTAGATAGGTGTATTCAGAT
AGGTTATTATCTACCATCTTATGGCCGTTGGCCTTCTTTTATCTACAAAATATGATTAAGCATAGATTTGAAAGTTGTTG
GCGTGCCTGTTAAGGATTGTCATAATTTGCTTCCAAGCTTGCGATGGAACGGGGCTTACTTGTACTTATATGCACTCCAT
ATGGATGGACTCAGTAGTTAGTACGTACTTAATTTTGGTGCGACATTTTACTTGGGAAC--ATTCAGCTCTTCATATTAT
TTTTTGGTT-GTTTGTTGTGATCAGGACGATAGTTCCGAAACCATGGCATCTCCAGCTGGTAAACAACAAGCACCCAGGT
TTGGGCGTGCTCCAACTCGAAGGCCTCCTACTTCACCCTGGATGCCCCTCCCAATGCTTTTTGCTGCCATCTCCACAAAA
GTTCCCCGTTCTGACATGGACGTAATCCATGGACACTATGAAGAATTCAAGGTTGTTAAT--GCTGTTTTCCTTCTGAGA
TAC----TGTACTTGGTTACAGTTATTGTTCCCAGTCAACATGCTAAATGTGATGTGCCTGTTGATGTTCC---AACAGA
GGAGAAAGATAAGCAGGCCCGAGTTTGTGGGACGACTAAGACAGATCGTCGGCGACAAGCTGCTGGTTTCTACAGTAATG
AGGCTGCAACCTAAGGTACTTGAGACCATTAACGCTAATCCTCCATGTCGTGTGCATA--CATTCAAAGTCTTTCTCATC
GTATGCAGTGTAGCCTGTTTTGTTG---------------------------------------------TGCTAAACAC
-TTGCTCATGTTGTCCATGACGGTTGCAGGTGGTGCCACCCATGGCAGGTGCTGAAGTGCTACCAAGAAGAACACCCGGC
ACGGGA--GAGCAGCACCTCCAGAAGTAG---------------------------------------------------
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>chr4A_1_TraesCS4A01G321300
GCTGCACCAGCAGCGTTCCTGGTTGGAGCAACGATGTGAAGCTGCATGGGTAAAGAGTCACAAAGGCATAATTATTCGTT
AATAATTGTGGTATTGCACCCAGTATTATTCAAGAAAAAGAAAATTTCA--TAGACTGACTAGAATATCATACTCCATAT
AGCAAGATCGACCAACACCTACCTTTTTAGTCGTTTGCATATCAGGTCATATGAGCTGGCAAATAAACTGTATTGTTATT
AAATGGGAAAGCACCACTGGCAAGAGCACCTTCTTCCTAGATACTAATCTTTAGCATCTGTAAGCGTCTAAGACAGGTTT
TAACAATCTATCATCCACTTACAAGAAGTCATTTCTATCAATGTAAAGGGTTCATGTTTAATGTTTCAGGACAGGTTAAT
TCCATGAATACTCAACTAGTTTTTTT--TCAGAGAAACAGAACATAATCATAATCATATTCATTTCATATTCTTATGAGT
TTCCATGCGCCATCAGTATTTATTGGTGAATTTAGT---------CCCGAGGAAACTCACACCCCTTTGTGATTTGCAAC
TTACTACTGCCAATGGTAATCCTTAATAGTTAACACTTCATCCGGAGAACAAAATGAGCACTGATAACATCTCCAGGTTG
TTTTTACTTGTTAGTTGAAAGGCTTAGTGAATCATTGAGCTAATATTGGTGTAGATTGCTATTTTCTTTTCTGGTGATAT
CTTTCCATGGTTTGGTTCTGCATGGTGTGTCATGAAAGAAATACATAGATTTGTCACACAATACTTTTTTTTTCCGCCAC
CCATGCTCCCCCCTCTGTACATATCTTTATTCCT-TTTTTTTGTGCTTATGTCCCAGGTCCATTTCACTTACCCTTGTGG
ATAACGTGGCTCATTTTGAAGTTACTTTTGTGCTAGCACAATCTAACTAGCTAGGTTAAGCTATAC----TGTTTACTTG
GTGGTGTAAATCTGTAAAGAAAGTCAATACTTAGTTTTAGTCGAGCTTTGTGTAAAATATGGAAAGGAAGGCTGGAATGA
TACTGGATGAACATGTTCTGAAAGCTAATGATCGCAAGAGGAAACATGAGTCTGCTGTGAAGATTACTGGCACAGATGAT
TCTGCTGAGGTCTCTCAGCATGCTGATGGTTCTGCTGCCCTTAAGAAGTCTAAAATGACCTCTTGTGCTGGCCATATTCT
GGAGTGGTATAAGAACTTCAAGACAAGCGGGTTGCCGGTGCGTGTGCTTTGTTACCACCAGGGTAAATGGAGGGATTTTC
CAGAGCATGTTGTGAATCTGGTACAGCAGGACTTCAAGTTGAAGAGGCCAATTACTAATGCTGTATTCAAGAACCAGCAA
GTCCTGTTGGACTTTATGCACATGGTCTGCATTGATTCTTCAATGACCACAAACAAGCCAATAGCATGGATTGATGTTCA
TGGTAACCGCTTCTTTCCAGAGTTATGTGCTGGACTGGTAACATCTAAACCATCTCAGCATGGGAAAAGTGACCCCAGTG
GTAAATCTGAAGCTGGTGAGTGTGCTGGGACTTTGATTTTAACAGCTGGAGCTGAAAGCTCGAGTTCAGATTCTGTTGAT
GCAGTACTCCCTCATGCTAAGAAGGT------------------------------ACATAATTATGCTGCTGTTGAAAA
TAAAGCTGGTCCTGCAATCTGTTTGAAGGAATCTGCTAGTGGAAACATACATGCTGCTACTTGTAAGCAGAAAATTGGCC
AACCTGTTGATTCAGCTGTGCGCAAATTATTACTTGAAGGGGCAGGCCAACCTTTTAGTGAAGAAAATATTGTTGGGATC
TACAGAACCCCACTGGTAGATCAGCAAGGGCGGGCTCGCTTCAATCTTTTCCAGAAGGAACTTGAAGTCACCAAAATGCA
TCGTGGGAATGCAAATGTGCGCTATGCGTGGCTACCTTGTTCCAAGGATGCTATGGAGGAGATGATGATGCGTGGTGTTC
TGGAAGTTACAAAACCAATGCTGGGGCCAATGTATGGCATTGGTACACATCTTGCTCCAGCGAACTGCGCCAAAACTTGG
TAAACACTTGTTCTGTTTCTGATTAATCTATGCATGTTAATCT---AAACTTTAGGCCATACGTCCATCTGTTCAAAAAA
ATTCACTGCAACAAATAGAATATTTGTTTGTATATATGCATCTTTAGGTTTTCTGCTGGATTGTTCTTGCTTTGAATATT
----------------------------------CAGTGGTTTCTTATGATCTTACTTGATTATTTTTCCACAGTGCCAG
CTACTCAGATATTGACGAAAATGGCATCATGAGGATGATGCTGTGCCGTGTTATAATGGGGAATGTTGAGGTTGTACTTC
CTGGATCAAAGCAATTCCAGCCAACCAATGAAAGATTTGATAGTGGCGTGGATGATCTTCAAAAGCCAAAGCACTATGTC
ATATGGGATGCTAATGTGCATCGACACATCTATGCTGAATATGCTGTTGTTATCAAAGCACCTTCCATGACCAATGGT--
-ACTACAGCC---ACTCTCATGGTTCTTGATTTTATCTGTCTTTCCATTTTTCATT-TTTACTTCTGTGTTGTTTACACA
AGAGAATTCATTTAATATTACTGCAGAATACATGGCTAGAGAAGATACTGCATCCAACGTATCTGAGATAAGAAATTCTG
GTTCAGCAGAAAGTGTAATCAAGGTATTCCTATTATGTTTAACTGGTTACAATCATATCTCAGCTTTGGTACACATTGTG
TCTTGAATGGACAGCATGTTGATACCCCACACGTATAGACTGCTGCATGTTTGGTGTGTATTAGATAGGTGTATTCAGAT
AGGTTATTATCTACCATCTTATGGCCGTTGGCCTTCTTTTATCTACAAAATATGATTAAGCATAGATTTGAAAGTTGTTG
GCGTGCCTGTTAAGGATTGTCATAATTTGCTTCCAAGCTTGCGATGGAACGGGGCTTACTTGTACTTATATGCACTCCAT
ATGGATGGACTCAGTAGTTAGTACGTACTTAATTTTGGTGCGACATTTTACTTGGGAAC--ATTCAGCTCTTCATATTAT
TTTTTGGTT-GTTTGTTGTGATCAGGACGATAGTTCCGAAACCATGGCATCTCCAGCTGGTAAACAACAAGCACCCAGGT
TTGGGCGTGCTCCAACTCGAAGGCCTCCTACTTCACCCTGGATGCCCCTCCCAATGCTTTTTGCTGCCATCTCCACAAAA
GTTCCCCGTTCTGACATGGACGTAATCCATGGACACTATGAAGAATTCAAGGTTGTTAAT--GCTGTTTTCCTTCTGAGA
TAC----TGTACTTGGTTACAGTTATTGTTCCCAGTCAACATGCTAAATGTGATGTGCCTGTTGATGTTCC---AACAGA
GGAGAAAGATAAGCAGGCCCGAGTTTGTGGGACGACTAAGACAGATCGTCGGCGACAAGCTGCTGGTTTCTACAGTAATG
AGGCTGCAACCTAAGGTACTTGAGACCATTAACGCTAATCCTCCATGTCGTGTGCATA--CATTCAAAGTCTTTCTCATC
GTATGCAGTGTAGCCTGTTTTGTTG---------------------------------------------TGCTAAACAC
-TTGCTCATGTTGTCCATGACGGTTGCAGGTGGTGCCACCCATGGCAGGTGCTGAAGTGCTACCAAGAAGAACACCCGGC
ACGGGA--GAGCAGCACCTCCAGAAGTAGCAGTTTGTCGATATAACAGCTCGTGGAGCCGCTCCTAGTGGAGAGATACAG
AGAGT--ACAAGGAAAGCCGTTAAGTTATGCGTCAGTTGGTTATAGACAA-AACTAGTGAGTAGACTGTGAGCAGCCTGT
TAAGTTG-----------TTTGGTTCCATCTGGTTGGTCTCTTGGCGTCAGTCGGTAACTGGA-AACACTCTGTTGTAGC
CGCTGCTGTTGTGTGCAAATCTGT-TTGCAGCTTGTACTGTAC------TATACTTGGTAGATTTGTTG-TTTTAATTTT
GAGCTGATGAACCTAGCATAGAATTGATAGAAGTAATGG-------TGAGTTTTAGTTGGCT----CTAGATTTTCTCTC
TTTT-GCTGACGAGCCTAGCATAGAATTGATACAAGTAATGGTGAGCTTGACTCGGCTCATGTGATTTCCCCCTTGGGGG
CCGTTGCTTCTTCAGCTCCTGTTGTGTTGGAAGAAACATGGTGGGAAGACAAAATCCAGAGTTTTCTTGTTTCTTGGATC
CAACCACACCAAGAAAAAGAAGCAATCTTGGTAGCAGGCATCTATCTATCTCTCCAAGGTAGTATCTATCACAGCATACA
TTATTGTCAGGCCTCCGTTGAAGAGATTTCTGAGGCCTTTGGGAAGACAAATTCCACTCTCACAAGCACCGTTACAGATG
ATGTTGTTATAACCTTGGTGATACTTGCATCCATTGCTTTACTTGAATTCCTACAGCTATTATTTTACTGGACATTGGGG
CAGAGTATCATTTATTTGTCAGTCTATCAGAGAGCAGGCAAGATTCAAGAAAAGAAAAGAAAAGAAAGAAGCGTGCACAG
AGGGTAACTTTTTTGTCATGGGGTTGAAGGAGTTTCTTGTCAAGATTGCTGTGTGTCTTCTTGCCAATATTGGCGTGGAT
CGTGGGATTAAAGGGGTTTCTTGCCAATATTGGCGTGTCATGTACTCCCTCTGTAAAACAACAGTGATCTAAACGTTCTG
ATATTAGTTTACGGAGGGAATACA
>chr5D_1
GCTGCACCAGCAGCGTTCCTGGTTGGAGCAACGATGTGAAGCTGCATGGGTAAAGAGTCACAAAAGCATAATTATTCTTT
AATAATTGTGGTATTGCTCCCAGTATTATTCAAGAAAAATAAAATTTTA--TAGACTGAATAAGATATCATACTCCAGAT
AGCAAGATCTACCAACACCTATCTTTTTAGTCATTTACATATCAGGTCATATGAGCTGGCAAATAAACTTTATTGCTACT
AAATGGGAAAGCACCACTGGCAAGAGCACCTTTCTCCTAGATACTAATCTTTAGCATCTGTAAGGGTTTAAGACATGTTT
TAACAATCCATCATCCATTTACAAGAAGTCGTTTCTATCAACGTAAAGGGTTCAAGTTTAATGTTTCAGGACAGGTTAAT
TCCATGAATACTGAACTAGTTTTTTTCCCCAGAGAAACAGAACATAATTATATTT------ATTTCATATTCTTGTAAGT
TTCCATGCGCCATCAGTATTTA---------TTGGT---------CCTGAGGAAACTCACACCCCTTTGTGATTTGCAAC
TTACTACTGCCAATGGTAATCCTTAATAGTTAACACTTCACCAGGAGAATAAAATGAGCACTGATAACATCTCCAGGTTG
TTTTTACTTGTTAGTTGAAGGGCTTAGTGAATCATTGAGCTAATATTGGTGTAGATTGCTCTTTTCTTTTCTGGTGATAT
CTTTCCATGGTTTGGTTCTGCATGGTGTGTCATGAAAGAAATACATAGATTTGTCACACAATACTTTTTTTTCCCACCAC
CCATGCT-CCCCCTCTGTACATATCTTTATTCCTCTTTTTTTCTGCTTATGTCTCAGGTCCATTTCACTTACCCTTGTGG
ATAACGTGGCTCGTTTTGAAGTTGCTTTTGTGCTAGCACAATCTAACTAGCTAGGTTAAGCTATACTCTTTGTTTACTTA
GTGGTGTAAATCTGTAAAGAAAGTCAATACTTAGTTTTAGTCGAGCTTTGTGTAAAATATGGAAAGGAAGAGTGGAATGA
TACTGGATGAACATGTTCTGAAAGCTAATGATCGCAAGAGGAAACATGAGTCGTCTGTGAAGAGTACTGGCACAGATTAT
TTTGCTGAGGTCTCTCAGCATGCTGATGGTTCTGCTGTCCTTAAGAAGTCTAAAATGACCTCCTCTGCTGGTGATATTCT
GGAGTGCTATAAGAACTTCAAGACAAGCGGTTTGCCCATGCGGGTGCTTTGTTACCACCAGGGTAAATGGAGGGACTTTC
CAGAGCATGTTGTGAATCTGGTACAGCAGGACTTCCAGTTGAAGAGGCCAATTACTAATGCTGTATTGAAGAACCAGCAA
GTCCTGTTGGACTTTATGCACATGGTCTGCATTGATTCTTCCATGACCACAAACAAGCCAATAGCATGGATTGATGTTCA
TGGTAACCGCTTTTTTCCAGAGTTATGTGCTGGACTGGTAGCATCTAAACCATCTCAGCATGGGAAAAGTGACCCCAGTG
GTAAATCTGAAGCTGGTGAGTGTGCTGGGAATTTGATTTTGACAGCTGGAGCTGAAAGCTCGAGTTCAGATTCTGTTGAT
GCAGTACTCCCTCATGCTAAGAAGGTTAATAACATACTGGAGGAAGAACACGAGGTACATAATTATGCTGCTGTTGAAAA
TAAAGCTGGTCCTGCAATCTGTTTGGATGAACCTGCTAGTGGAAACATACATGCTGCTACTTGTAAGCAGAAAATTGGCC
AACCTGTTGATTCAGCTGTGCGCAAATTATTACTTGAAGGGGCAGGCCAACCTTTTAGTGAAGAAAATATTATTGGCATC
TACAGAACTCCACTGGTAGATCAGCATGGGCGGGCTCGCTTCAATCTTTTCCAGAAGGAACTTGAAGCCACCAAAATGCG
TCGTGGGAACGCAAATGTGCGCTACGCATGGCTACCTTGTTCCAAGGATACCATGGAGGAGATGATGATGCGTGGTGTTC
TGGAAGTTACAAAACCCATGCTGGGGCCAATGTATGGCATTGGTACACATCTTGCTCCAGCGAACTGCGCCAAAACTTGG
TAAACACTTGTTCTGTTTCTCATTTAT----GTATGTATGCTAATCTAAATTTAGGCCATAAATCCATCTGTTAAAAAAA
ATTCACTGCAACAAATAGAATATTTGTTTGTATATATGCATCTTTAGATTTTCTGCTGGATTGCTCTTGCTTTCAGTATT
----------------------------------CAGTAGTTTCTTATGATCTTACTTGATTATTTTTTCACAGTGCTAG
CTACTCAGATATTGACGAAAATGGCATCATGAGGATGATGCTGTGCCGTGTCATAATGGGGAATGTTGAGGTTGTACTTC
CTGGATCAAAGCAATTCCAGCCAACTAATGGAACATTTGATAGTGGCGTGGATGATCTTCAAAAGCCAAAGCACTATGTC
ATATGGGATGCTAATGTGCATAGACACATCTATGCTGAATATGCTGTTGTTATCAAAGCACCTTCCATGACCAATGGT--
-ACTACTACAGCTACTCTCATGGTTCTTGATTTTATCTGTCTTTCCATTTTTCATTATTTCCTTCTGTGTTGTTTATGCA
AGAGAATTCATTTGACATTACTGCAGAATACTTGGCTGGAGAAGATACTGCATCCAACGTATCTGAGATAAGAAATTCTG
GTTCAGCAGAAAGTGTAATCAAGGTATGCTTATTATGTTTAACTGGTTACAATCATATCTCAGCTTTGGTATACATTGTG
CCTTGAATGGACAGCATGTTAATACCCCACACGTATTGACTGCTGCATGTTTGGTGTGTATTAGCTAGGTGTATTCAGAT
AGGTTATTATCTACCATCTTATGGCTATTGGCCTTCTTTTATCTAAAAAATATGAGTAAGCATAGATTTGAAAGTTGTTG
GCGTGCTTGTCAAGGATTGTCATAATTTGCTTCCAAGCTTGCGATGGAACTGGGCTTACTTGTACTTATATGCACTCCAT
ATGGATGGACTCAGCATTTG----GTACTTAATTTCGGTGTGACATTTTACTTGGGAACTTTTTCAGCTTGTCATATTTT
TTGTTTGTTTGTTTGTTGTGATCAGGACGATAGTTCCGAAACCTTGGCATCCCCAGCTGATAAACAACAAGCACCCAGGT
TTGGGCGTGCTCCAACTAGAAGGCCTCCTACTTCACCCTGGATGCCCCTCCCAATGCTTTTCGCTGCCATCTCCACAAAA
GTTCCTCGTTCTGACATGGACGTAATCCATGGACACTATGAAGAATTCAAGGTTGTTATAACGCTGTTTTCCTTCTGAGA
TAC----T-----TGGTTACAGTTACTGTTCCCAGTCACCGTGCTAAATGTGATGTGCCTGTTAACGATGCTGAAACAGA
GGAGAAAGATAAGCAGGCCCGAGTTTGTGAGACGGCTAAGACAGATCGTCGGCGACAAGCTGCTGGTTTCTACAGTAGTG
AGGCTGCAACCTAAGGTACTTGAGATCATTAACGCTAATCCTCCATGTCGTGTGCATA--CATTCAAAGCCTTTTTCATC
ATATGCAGTGGAGCCTGTTTTGTTGTGCATAAGTGATTTTGTCTTCTTCATCTGGCAGTAGCATATGCTTTGCTAAACAC
-TTGCTCGTGTTGTCCATGACTGTTGCAGGTAGTGGCACCCATGGCAGGTGCTGAAGTGCTACCAAGAGGAGCACCCGGC
ACGGGAGGGAGCAGCACCTCCTGAAGTAGCAGTTCGTCGAGATAACAGCTCGTGGAGCCGCTCCTAGCGGAGAGAGG---
-GAGAGCATAAGGGAAGCCATT-AGTTATGTGTCAGTTGGTTATAGACAA-GACTAGTCAGTAATCTGTGAGCAACCTGT
TAAGTTGGTGTAGCT--------TTCCATCTGGTTGGTCTCTTGGCGTCAGTCGGTAACTGGAAAAAACTCTGTTGTAGC
AGCTGCTGTTCTGTGCAAATCTGT-TTGCAGCTTGTACTGTGC------TGTACTTGGTAAATTTATTG-TCTTAATTTT
GAGCTGATGAACCTAGCATAGAATAT--GTAGACTTCACCTGATGTTGAGTTTCAGCTGGCT----CTAGATTTTCTCTC
TTTT-GCTGACGAGCCTAGCATAGAATTGATAGAAGTGATGGTCAGCTTGAGTTGGCT----------------------
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------------------------
>chr5B_4
---GCACCAGCAGTATTCCTGGTTGGAGCAACGATGTGAAGCTGCATGGGTAAAGAGTCACAAAGGCATGATTATTCTTT
AATAATTGTGGCATTGCACCCATTATTATTCAAGAAAAAGAATTTTTTCCCTAGACTGAATAGAATATCGTATTCCAGAC
AGCAAGATCTACCAACTCTTACCTTTTTAGTCATTTACGTATCAGGTCATATGAGCTGGCAAATAAACTTTATTGCTATT
AAATGGGAAAGCACCACTGGCAACAGCACCTTTCTCCTAGATACTAATCTTTAGCATCTCTAAGCGTCTAAGACATGTTT
TAACAATCCATCATCCATTTACAAGAAGTCATTTCTATCAACGTAAAGG-TTCAAGTTTAATGTTTCAGGACAGATTGAT
GCCACGAATACTCAACTAGTTTTTTTTTTCAGAGAAACAGAACATAATTATATTT------AATTCATATTCTTACAAGT
TTCCATGCGCCATCAGTATTTA---------TTGGTGAATTTAGTCCTGAAGAAACTCACATCCCTTTGTGACTTGCAAC
TTACTACTGCCAATGGTAATCCTTAATAGTTAACACTTCATCAGGAGAACAAAATGAGCACTGATAACATCTCCAGGTTG
TTTTTACTTGTTAGTTGAAAGGCTTACTGAATCATTGAGCTAATATTGGTGTAGATTTCTCTTTTCTTTTCTGGTGATAT
CTTTCTATGGTTTGGTTCTGCATGGTGTGTCATGAAAGAAATACATAGATTTGTCACACAATACTTTTTTTTCC-GCCAC
CCATGCT-CCACCTCTGTACATATCTTTATTCCG-TTTTTTTCTCCTTATTTCCCAGGTCCATTTCACTTACCCTTGTGG
ATAACATGGCTCGTTTTGAAGTTACTTTTGTGCTAGCATAATCTAACTAGCTAGGTTAAGCTATACTC------------
------TAAATCTGTAAAGAAAGTCAATACTTAGTTTTAGTTGAGCTTTGTGTAAAATATGGAAAGGAAGACTGGAATGG
TACTGGATGAACATGTCCTGAAAGCTACTGATCGCAAGAGGAAACATGAGTCGTCTGTGAAGAGTACTGGCACAGATGAT
TTTGCTGAGGTCTCTCAGCATGCTGATGGTTCTGCTGTCCTTAAGAAGTCTAAAATGACCTCCTCTGCTGGTGATATTCT
GGAGTGCTATAAGAACTTCAAGACAAGCGGTTCGCCCGTGCGCGTGCTTTGTTACCACCAGGGTAAATGGAGGGACTTTC
CAGAGCATGTTGTGAATCTGGTACAGCAGGACTTCCAGTTGAAGAGGCCAATTACTAATGCTGTATTGAAGAACCAGCAA
GTCCTGTTGGACTTTATGCACATGGTCTGCATTGATTCTTCGATGACCACAAACAAGCCAATAGCATGGATTGATGTTCA
TGGTAACCGCTTCTTTCCAGAGTTATGTGCTGGACTGGTAACATCTAAACCATCTCAGCATGGGAAAAGTGACCCCAGTG
GTAAATCTAAAGCTGGTGAGTGTGCTGGGACTTTGATTTTGACAGCTGAAGCTGAAAGCTCGAGTTCAGATTCTGTTGAT
GCAGTACTCCCTCATGCTAAGAAGGTTAATAACATACTGGAGGAAGGACAGGAGGTACATAATTATGCTGCTGTTGAAAA
TAAAGCTGGTCCTGCAATCTGTTTGAATGAACCTGCTAGTGGAAACATACATGCTGCTACTTATAAGCAGAAAATTGGCC
AACCTGTTGATTCAGCTGTGCGCAAGTTATTGCTTGAAGGGGCAGGCCAACCTTTTAGTGAAGAAAATATTATTGGCATC
TACAGAACTCCACTGGTAGATCAGCAAGGGCGGGCTCGCTTCAATCTTTTCCAGAAGGAACTTGAGGCCACCAAAATGCA
TCGTGGCAACGCAAATGTGCGCTACGCGTGGCTACCTTGTTCCAAGGATACTATGGAGGAGATGATGATGCGTGGTGTTC
TGGAAGTTACAAAACCCATGCTGGGGCCAGTGTATGGCATTGGTACACATCTTGCTCCAGCGAACTGTGCCCAAACCTGG
TAAATACTTGTTCTGGTTCTTATTTAT----GCATGTTAATCT---TAACTTTAGGATATACATCCATCTGTTCAAACCT
GGTA--------------AATATTTGTTTGTATATATGCATCTTTAGATTTGCTGCTGGATAGCTCTTGCTTTGAATATT
CAGTATTTCTTATGATCTTACTTGATTAAATATCCAGTAGTTTCTTATGATCTTACTTGATTATCTTTTCACAGCGCTAG
CTACTCAGATATTGACGAAAATGGCATCATGAGGATGATGCTGTGCCGTGTTATAATGGGTAATGTTGAGGTTGTACTTC
CTGGATCAAAGCAATTCCAGCCAACCAATGAAAGATTTGATAGTGGTGTGGATGATCTTCAAAAGCCAAAGCACTATATC
ATATGGGATGCTAATGTGCATCGACACATCTATGCTGAATATGCTGTTGTTATCAAAGCACCTTCCATGACCAATGGTAC
TACTACAGCC---ACTCTCATGGTTCTTGATTTTATCTGTCTTTCCATTTTTCATT-TTTGCTTCTGTGTTGTTTACACA
AGAGAATTCATTTGATATTACTGCAGAATACTTGGCTAGAGAAGATACTGCATCCAACATATCTGAGATAAGAAATTCTG
GTTCAGCAGAAAGTGTAATCAAGGTATGCTTATTATGTTTAACTGGTTACAATCATATCCTAGCTTTGATACACATTGTG
TCTTGAACGGGCAGCATGTTAATACCCCACACGTATTGACTGCTGCATGTTTGGTGTGTATTAGCTAGGTGTATTCAGAT
AGGTTATTATCTACCATCTTATGGCCGTTGGCCTTCTTTCATCTAAAAAATATGATTAAGCATAGATTTGGAAGTTGTTG
GCGTGCTTGTTAAGGATTGTCATAATTTGCTTCCAAGCTTGCGATGGAACTGGGCTTAGTTGTACTTATATGCACTCCAT
ATGGATGGACTCCGCAGTTG----GTACTTAATTTCGGTGCGATATTTTACTTGGGAAC--TTTCAGCTTGTCATATTTT
TTGTTTGTTTGTTTGTTGTGATCAGGACGATAGTTCCGAAACCATGGCATCTCCAGCTGATAAACAACAAGCACCCAGGT
TTGGGCGTGCCCCAACTCGAAGGCCTCCTACTTCACCCTGGATGCCCCTCCCAATGCTTTTCGCTGCCATCTCCACAAAA
GTTCCTCGTTCTGACATGGATGTAATCCATGGACACTATGAAGAATTCAAGGTTGTTATAACGCTGTTTTCCTTGTGAGA
TACGTACT-----TGGTTACAGTTACTGTTCCCAGTCACTGTGCTAAATGTGTTGTGCCTGTTGACGATGTTGAAACAGA
GGAGAAAGATAAGCAGGCCCGAGTTTGTGAGACGGCTAAGACAGATCTTCGGCGACAAGCTGCTGGTTTCTACAGTAATG
AGGCTGCAACCTAAGGTACTTGAGACCATTAACGCTAATCCTCCATATCGTGTGCATATGCATTCAAAGACTTATTTATC
ATATGCAGAGGATCCTGTTTTGTGGTGCATAAGTGATTTTGTCTTCTTCATCTGGCAGTAGCATAGGCTTTGCTAAGCAC
TTTGCTCGTGTTGTCCGTGACTGTTGCAGGTAGTGGCACCCATGGCAGGTGCTGAAGTGCTACCAAGAGGAGCACCCGGC
ACGGGAGGGAGCAGCACCTCCTGAAGTAGCAGTTCGTCGAGATAACAGCTCGTGGAGCCGCTCCTAGTGGAGAGAGATAG
AGAGAGCACAGGGGAGGCCATTAAGTTATGTGTCGGTTGGTTATAGACAAAAACTAGTCGGTAAACTGCGAGCAGCCTGT
TAAGTTGGTGTAGCTTTGTTTGGTTCCATGTGGTTGGTCTCTTGGCGTCAGTCGGTAACTGGA-AACACTCTGTTGTAGC
CGATGCTGTTGTGTGCAAATCTGTGTTGCAGCTTGTACTGTGCCTGTGCTGTACTTGGTAGTTTTTTTGTTTTTAATTTT
GAGCTGATGAACCTAGCATAGAATATATGTAGACCTCACCTGAGGTTGAGTTTCAGCTGGCTGGCCCTAGATTTTCTCTC
TTTGAGCTGACGAGCCTAGCATAGATTT----------------------------------------------------
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>SNPs
-----------------------------------------------------------------------------S--
-----------------------------------------------S-----------S-----------------S--
---------S----------------------S---S--------------------------------S-----S----
--------------------------------SS-----------------------------------------S----
--------S--------S-----------------------S------------S-------------------------
------------------------------------------------S---S-SSSSSSS---------------S---
----------------------SSSSSSSSS--S-------------S--------------------------------
------------------------------------------S-------------------------------------
------------------------------------------------------------S-------------------
------------------------------------------------------------------------S-------
-------S----------------------------------S-------------------------------------
------------S------------------------------------------------------------------S
----------------------------------------------------------------------S---------
----------------------------------------------------SS---------S----------------
-S-----------------------------------S------------------------S-S------SS-------
------S-----------------------S-----S-----S--------------------------------S----
-----------------------------------S-------------------------------S------------
-----------------------------------------S--------------------------------------
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
---------------------------S---S------------------------------------------------
-----------------------------------------------------------------------S----S---
--------S----------------------------------------------------------S------------
---------S--------------S------------------------S------------------------------
----------------S---------------------------------------------------------------
--------------------S---S--SSSS---------------S---------------S-----------------
-----------------------------------------------S---------------S----------------
--------------------------------------S-----------------------------S--------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------S-------------------
-------------S-----------------S------------------------------------------------
---------------------------S-S--------------------------------------------------
--------------------S---------------S---------------------------S---------------
---------------------------------------------S----------------------------------
------S-------------------------------------------S-----------------------------
--------------S----SSSSS-----------S-------------------------S-------SS-------S-
--S--S-----------------------------------------------------S--------------------
-------------------------------------------------------------S------------------
-----S----------------------------------------------------SS--------------------
--------SSSSS------------S------------S-S------------------------S-S-S----------
-----------------------------S----S---------------------------------------------
---------------------------------------------------------------------S----S-----
S---------S---------------------------------------------------------------------
-------S-------------S---------S---S--------------------------------S--S--------
---------------------S------------S-----S----------------------------------S-S--
----S--------S-----S----------S---------------------------S----S----------------
--------------------------------------------------------------------------------
-----------------------------------------S--------S--------------S--------------
------------------------SS--SS-SSSSSSSS--------------S--S-----------------------
--------------------------------S----S-----S-------S-S----SSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSS
>forward_274
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------CACTGGCAAGAGCACCTTCT----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------
>reverse_1237
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------GGTGCGTGTGCTTTGTTACC------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------
>forward_1158
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------CATGCTGATGGTTCTGCTGC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_2309
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CCACAGTGCCAG
CTACTCAG------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>forward_1193
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------AATGACCTCTTGTGCTGGCC-------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------
>reverse_2837
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------AGACTGCTGCATGTTTGGTG------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_1276
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------CACCAGGGTAAATGGAGGGAT----
--------------------------------------------------------------------------------
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------------------------
>reverse_3262
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------TGCTGCCATCTCCACAAAA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------
>forward_2967
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------TTGAAAGTTGTTG
GCGTGCC-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------
>reverse_4750
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------TTGGCGTGTCATGTACTCCC-------------------------------
------------------------
