>input_sequence_29867
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----ATGTCGCACACGTCGGAGGAAGAGTCTCTTAGCAGCTTCCAGCAGCAACCCAAGCTTGAGGTCGGCGCGGCGGGGC
CGAGCAGAGGCGACCCGGCGGCCATGCCCGTGGTGAAAAAGAGACGAGGTCATCCAGGAAATCCAGGTAT----------
---------GTT---------------TCAACTATTGTTGGTCTGATGAACACACATGCAAGTGTAATATAACAATGAGA
TGCACCAGATGAATGTTTAAAACGGGGAA--------------------------------------CGTGCATGTTTTG
TTAGAAAGTCTCAAGTTTACCATATTGTATTCTTCTTATTAGTACCTGGCAACTGATATATGGAAGATCAAAGTGTCCTT
GTTCAGTGTTGTATAGATTTGACCAACCAACTGATGATGTTA----TTACTGTATCGTAACAGAAATTTATGTTATTGCT
TATTAGTTCTATATTTATCTACAGTTTTTTAAAGCATGTAGCTCTATAGTTTAAAGAAATAAAAAA-CACGAACCTGAAT
GAGTTCAGCTCATAGT------ATGATCTATTTGCCAACTAAAGCATCACAAAA--TAAAGCAAGTTGTAGTTTCAAGTT
CAGACCGCCAATCACGTTTCTAATTTGAACACACAAATGTAATAATTCTGCTGTGGCTACTTCTGGCTGGAGCCGAGAGC
TGTGAACTCTGTGTGTTGGTTGCCTTTGCTTTTTCAATAAAAAGTTGGGGCAGGGGGGCGACCCCTTTCGTTTCAAAAAA
ATTTGAACACACAAATGGTACAAAGGAATTGCAAACGGATACTAAAG-AATAGATTTTGATTTACAAAACTG-AATTGGT
AACA---------------TAGCCGGGT---CAGAAACTGAAGTGATGAAC-AAAAAAAGAGAGTTCCAATCTGTGGTAA
CCTAACATTGGTTTCATGATGTCCATCTTGCAGACCCAGACGTGGAAGTAGTAGCTTTATCACCCAAGACACTCGTTGCG
ACAAACCGATACATATGTGAAGTCTGCCATAAGGGTTTCCAGAGAGACCAAAACCTCCAGCTCCACCGGAGGGGTCATAA
TCTGCCATGGAAGCTCAAGCAGAGAAGCAGCACTGACGCTAAGAAGAAGGTGTATGTCTGCCCTGAGGTCACCTGCCCTC
ATCACGACGCCACCCGAGCTTTGGGTGATCTCACAGGCATAAAAAAACACTTCTCCAGGAAGCATGGGGAGAAGAAGTGG
AAGTGCGAGAGATGTTCGAAGAAGTATGCTGTCCAATCTGACTGGAAGGCTCACACTAAGATATGTGGCACGAAGGAGTA
CCGATGCGATTGCGGAACTATATTCTCAAGGTATGCTTCTCACTTTGGA---------------TAATCACACCAAGAAT
TCAAGCAAATGCATCATTAGCCATGAAAAACAAATATATTTATCAAGGTTCAAGGATACATGAACATTAAGGTCATTCAG
TAAAATAACAGTGCATGTAGACCGAAGTACTGACGTCGTATTT--ACAAAATGCAGACGCATAGTCTGCAGCTAATTGCA
ACTGAAAATCACATGCTATATGTAGCTTATGTCTCTGTTGCTTACGA-GGAAAATATTGTTT------TTACCTTTCCAT
ATTCACACAGTTTACATACTACTATTTGAAGCAATGCATTGCAATATTTTAGCATCTGTGGCAGGCCCTGATGGGAGTAT
CATATTAGACTAGCCATGGAGCTCACCGCAGCCATGCCATTTAAAATGCAGACTTTCTTGGAACTCGATATTTAGCTCTA
CTTTATGTTAATGCAGAAAGGATAGCTTCATCACGCATCGGGCCTTCTGCGATGTATTAGCTGAAGACAACTCAAGGGTT
AACCACAGCCTTGCTACAATGGTGGGAAGTCTGCATGGTCAGCATGACATGTATTCACATGGGGTGCCTAGCCCCACTGA
TATGGTTGCAAACATGTCCAGCAATGACCATAACTCAGACATGCATCTAAGATCTTTATCTCCTTATGCTCTCATCACAA
GGAACACTGCCTTGTTCTCCAACCAGATACCACCCAAGGATCCAGGATTCCCACTTGATGGAAGTGCATCAGGCTACCCT
TACATGTCCATGAACTCCCCATACATGTCGGCGACAGCCCTGCTGCAGAAAGCTGCAGAGATGGGAGCAAAGACCAGCCA
AGATCCCATTTCACCATTGCTTCTAAAAGGATTCGCAAACAACTTCACCAGTGCTAGAGACCATATGGGCATATCTTCTG
GAAGCCAAGGAGATTCTATGGGGAATTCAGCAGCTAACAGTGTTTGCATGAAGGCTGCCGAAGATGAGAGCATGAATGGT
CACAACAATATCTTGATCAACTCAGCATGGACCAG---CGGCATGATGACACCGACTACCGTGCCTTTAATTGGGCTCAT
GAACAATCCATTTTCCATGAGACAAGAGAAGGAGAGCCCTCAGATTATGCCCGATATCCAGACGCAGCACAACAGACAGG
AAAACATTTCAGAGGTAGGAGATGCGGGCCTAACACAGGACTTTCTAGGGTTAGGAGGCAACGGGAATTTGGATATAAGC
TCTGGGACCTATAATACGGATGTGACAGCATTGAGCTATTCTGATGACCAACAGAAAAATCAGGAGCAAATGTATTCTTA
CCATGAGTCATCGCTTGACTCCACTGCATTGGACAAACCTATGTGGGATTCATGA-------------------------
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>chr4B_1_TraesCS4B01G296200
TGTGCACGACATGGCTTTTTGTCTGTTTTCATTCAGTCCGTCTGAGTCGGGCCACAAATTCAGAATGCCCAAAATCCAAT
AATCCACTATCAAACGCCTCCCTAACACGCACAGAAAGCAAGCGTGTACACAGCTAGCGCACAGTCCACGCACACTCGGA
CAGCAAGCTCGCC--------------------CACACACGCGCACGCTGCAGGCAGTCACGAAGCACAACACACGCCCG
GAATGAGGCCGCGGCCTGACTAAAGCGCCAAATGTTAAAGCAACAAGCAAACTCGAACGGCTGCACCCACGAAGAAGAAG
CAGGGGTTAATAGTACTGGCCGGTTAGAACAAACGCGGCCAACGGTTTGTCGCTTCTCCCGGATCTCTCCCTTTGTTACT
TGTACCGTCTGCTGCCTGCTCTCGAGTACAGATACAACCATTTTTATTCATCAATCAGTCTGTCTGATAGCGACATCGTC
CCTAGAAAACTGCATTATCAGTTAAGCATCTTGGAGATCGTCCTCGACGTCGACCGCCGAATTGATTTACTTACCCAGGG
TGAAACATGACATGCACTTGATCCTCGCCCGTCGATAATTACAAGGTGCTAATCTCAGTAGG-AAAACCAGCGATCTCAG
TAATCCCAGTGGTAGCTAAAATCAGGGGCCTATCTACGGATAATCTGCATGATGCACGTAACAGTAGCGAACTGCGACAG
TAGGAACATGTAGCTCAAGACTACTTTTCTCTTCATTTTTATTTATGTCTGATCTGGGGAAAATTCATGTGAT-------
----------GAAATAAATAAAATAAGCAGAACATTCCGTGCCAAGGAGGAAACCAGATTCTGATTCCGCTGTTTT-CT-
-TACTAAACGCTTGCATTGCCGTCCTTGACACGGACTGGAAGGGGATTTTCGCCGTTTACCTGCTGTCATGTTGCAGTCT
CACCGTTG-GCATAAAATCCAGCACCCCCT--TCACTACGCTGGCACCCTCTGGAACAGCCAGCAACTCAAGCTCCCAAC
AACAATGTCGCACACGTCGGAGGAAGAGTCTCTTAGCAGCTTCCAGCAGCAACCCAAGCTTGAGGTCGGCGCGGCGGGGC
CGAGCAGAGGCGACCCGGCGGCCATGCCCGTGGTGAAAAAGAGACGAGGTCATCCAGGAAATCCAGGTAT----------
---------GTT---------------TCAACTATTGTTGGTCTGATGAACACACATGCAAGTGTAATATAACAATGAGA
TGCACCAGATGAATGTTTAAAACGGGGAA--------------------------------------CGTGCATGTTTTG
TTAGAAAGTCTCAAGTTTACCATATTGTATTCTTCTTATTAGTACCTGGCAACTGATATATGGAAGATCAAAGTGTCCTT
GTTCAGTGTTGTATAGATTTGACCAACCAACTGATGATGTTA----TTACTGTATCGTAACAGAAATTTATGTTATTGCT
TATTAGTTCTATATTTATCTACAGTTTTTTAAAGCATGTAGCTCTATAGTTTAAAGAAATAAAAAA-CACGAACCTGAAT
GAGTTCAGCTCATAGT------ATGATCTATTTGCCAACTAAAGCATCACAAAA--TAAAGCAAGTTGTAGTTTCAAGTT
CAGACCGCCAATCACGTTTCTAATTTGAACACACAAATGTAATAATTCTGCTGTGGCTACTTCTGGCTGGAGCCGAGAGC
TGTGAACTCTGTGTGTTGGTTGCCTTTGCTTTTTCAATAAAAAGTTGGGGCAGGGGGGCGACCCCTTTCGTTTCAAAAAA
ATTTGAACACACAAATGGTACAAAGGAATTGCAAACGGATACTAAAG-AATAGATTTTGATTTACAAAACTG-AATTGGT
AACA---------------TAGCCGGGT---CAGAAACTGAAGTGATGAAC-AAAAAAAGAGAGTTCCAATCTGTGGTAA
CCTAACATTGGTTTCATGATGTCCATCTTGCAGACCCAGACGTGGAAGTAGTAGCTTTATCACCCAAGACACTCGTTGCG
ACAAACCGATACATATGTGAAGTCTGCCATAAGGGTTTCCAGAGAGACCAAAACCTCCAGCTCCACCGGAGGGGTCATAA
TCTGCCATGGAAGCTCAAGCAGAGAAGCAGCACTGACGCTAAGAAGAAGGTGTATGTCTGCCCTGAGGTCACCTGCCCTC
ATCACGACGCCACCCGAGCTTTGGGTGATCTCACAGGCATAAAAAAACACTTCTCCAGGAAGCATGGGGAGAAGAAGTGG
AAGTGCGAGAGATGTTCGAAGAAGTATGCTGTCCAATCTGACTGGAAGGCTCACACTAAGATATGTGGCACGAAGGAGTA
CCGATGCGATTGCGGAACTATATTCTCAAGGTATGCTTCTCACTTTGGA---------------TAATCACACCAAGAAT
TCAAGCAAATGCATCATTAGCCATGAAAAACAAATATATTTATCAAGGTTCAAGGATACATGAACATTAAGGTCATTCAG
TAAAATAACAGTGCATGTAGACCGAAGTACTGACGTCGTATTT--ACAAAATGCAGACGCATAGTCTGCAGCTAATTGCA
ACTGAAAATCACATGCTATATGTAGCTTATGTCTCTGTTGCTTACGA-GGAAAATATTGTTT------TTACCTTTCCAT
ATTCACACAGTTTACATACTACTATTTGAAGCAATGCATTGCAATATTTTAGCATCTGTGGCAGGCCCTGATGGGAGTAT
CATATTAGACTAGCCATGGAGCTCACCGCAGCCATGCCATTTAAAATGCAGACTTTCTTGGAACTCGATATTTAGCTCTA
CTTTATGTTAATGCAGAAAGGATAGCTTCATCACGCATCGGGCCTTCTGCGATGTATTAGCTGAAGACAACTCAAGGGTT
AACCACAGCCTTGCTACAATGGTGGGAAGTCTGCATGGTCAGCATGACATGTATTCACATGGGGTGCCTAGCCCCACTGA
TATGGTTGCAAACATGTCCAGCAATGACCATAACTCAGACATGCATCTAAGATCTTTATCTCCTTATGCTCTCATCACAA
GGAACACTGCCTTGTTCTCCAACCAGATACCACCCAAGGATCCAGGATTCCCACTTGATGGAAGTGCATCAGGCTACCCT
TACATGTCCATGAACTCCCCATACATGTCGGCGACAGCCCTGCTGCAGAAAGCTGCAGAGATGGGAGCAAAGACCAGCCA
AGATCCCATTTCACCATTGCTTCTAAAAGGATTCGCAAACAACTTCACCAGTGCTAGAGACCATATGGGCATATCTTCTG
GAAGCCAAGGAGATTCTATGGGGAATTCAGCAGCTAACAGTGTTTGCATGAAGGCTGCCGAAGATGAGAGCATGAATGGT
CACAACAATATCTTGATCAACTCAGCATGGACCAG---CGGCATGATGACACCGACTACCGTGCCTTTAATTGGGCTCAT
GAACAATCCATTTTCCATGAGACAAGAGAAGGAGAGCCCTCAGATTATGCCCGATATCCAGACGCAGCACAACAGACAGG
AAAACATTTCAGAGGTAGGAGATGCGGGCCTAACACAGGACTTTCTAGGGTTAGGAGGCAACGGGAATTTGGATATAAGC
TCTGGGACCTATAATACGGATGTGACAGCATTGAGCTATTCTGATGACCAACAGAAAAATCAGGAGCAAATGTATTCTTA
CCATGAGTCATCGCTTGACTCCACTGCATTGGACAAACCTATGTGGGATTCATGATGC---------AAACGATTTCCTT
ACTCTGGTACTAGTTCAGTTTTAGCTAAGCTGCCCGAGGTGCAGAATTAGCCATTACCAAGGTATAGCATGTATGAGA--
CAGCACACCATGTGTTTTGTTAACTTGAATATGGTCAAGAACTAGATAGTACCATTTTATTGGCAAACTCAGGAAGTAGC
CAGGCAATCTTATCAACATAATGGGGGCATTCGGGGTGGATTTAAGTAACTATTGTATTTTCCTTTGGCAGAAATGTTAA
TAAATATTTTGGAAGAAGTTGGCACAAAAATTTGAATCGGTGGATGTAGATTGTAGATCAATGTATTCAGCTAAAGAATA
GTTGGGATCAACAATGTTATACTCCCTCCGTCCCAAAATACTTGTCGGAGGAATGGACGTATCTAGATGTATTTTAGTAT
TAGATACATTCCTTTTTAGTCATTTCTACGACAAGTATTTCCGGACGAAGGGAGTAAAAAACAGTCATTCAAAGCAAACA
ACAGAGTATTCCTTAGAGCATCTCTAGCCCTTGCCATAAACTTTAAGGCCATCTCCAATGTTGGATGCTTA---------
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-------------------------------------------------------------------------------T
ATAGGCGCTTTTGGCGGAAAAAATATCC-AAAAATAAAATGGGATCTAGCGTCCTTTCTTCCAATGTCAGGCGCTAATAA
CAGGCTCCAATTCCTATTACTTCGTAGTAGGAATATAAGAGTGTTTTGATCACTAAAGTAGTGATCTAAATACTCTTATA
TTTCTTTACATGGGAGTAGAAAGAAGGGCCCAACCCTCTCGTACGGGAAAGACTGAGCCTAGCGCTCGATGCTTTTCTTT
GCATCGATGTCACACTTAGTGCTGGGAATAAACAGCCTAACTGACAATCTACCAGGATTTATATCCTAGGGCCCTGGCCT
AGCTCCTCCC------GATGGCTTAAGTCCCTAGACGAACTACCCAC-AAAACTTAACTCCCTCTCTCTCCTTAATTAGC
TTTCATCTGCCATGCATAGACATGGAAATGTAAAAACATGCG
>chr4D_1
TGTGCACGACATGACTTTTTGTCTGTTTTCATTCAGTCTGGCTGAGTCGGGCCACAAATTCAGAATGCCCAAAATGCAAT
AATCCACTATCAAACGCCTCCATAACACGCACAGAAAGCAAGC--GTACACAGCTACCGCACAGCCCACGCACACTCGGA
CAGCAAGCTCACACACACACACACACACACACACACACACACACACGCTGCAGGCAGTCACGAAGCACAACCAAG---CG
CATTGAGGCCGCGGCCTGACTAAAGCGCCAAATGTTAAAGCAACAAGCAAACTCGAACGGCTGCACCAACGAAGAAGAAG
CAGGGGTTAATAGTACTGGCCGGTTAGAACAAACGCGGCCAACGGTTTGTCGCTTCTCCCGGATCTCTCCCTTTGTTACT
TGTACCGTCTCCTGCCTGCTCTCGAGTACAGATACAACCATTTTTATTCATCAATCAGTCTGTCCGATGGCGACATCGTC
CCTAGAAAACTGCATTATCAGTTAAGCATCTTGGAGATCATCCTCGACGTCGACTGGCCAATTAATTTACTTACCCAGGG
TGAAACATGACATGCACTTGGTCCTCGCCCGTCGATAATTACAAGGTGCTAATCTCAGTAGG-AAAACCAGCGATCTCAG
TAATCCCAGTGCTAGCTAAAATCAGGGGCCTATCTACGTACAATCTGCATGATGCACGTAACAGTAGCGAACTGCGACAG
TAGGAACATGTAGCTCAAGACTACTTTTCTCTTCATTTTTATTTATGTCT--------------------GAT-------
----------GAAATAAATAAGATAAACAGAACATTCCGTGCCAAGGGGGAAACCAGATTCTGATTCCACTGTTTTTCTA
ATACTAAACGCGAGCATTGCCGTCCTTGACACGGACTGGAAGGGGATTTTCGCCGTTTACCTGCTGTCCGGTTGCAGTCT
CACCGTTGTGCATAAAATCCAGCATCCACCCCTCACTACGCTGGCACCCTCTGGAACAGCCAGCAGCTCAAGTCCCCAAC
AACAATGTCGCACACGTCGGAGGAAGAGTCTCTCAGCAGCTTCCAGCAGCAACCGAAGCTCGAGGTCGGCGCGGCGGGGC
CGAGCAGAGGCGACCCGGCGGCCATGCCCGTGGTGAAAAAGCGACGAGGTCATCCAGGGAATCCAGGTAT----------
---------GTTGCCTCAACTCAAGTTTCAACTGTTGTTTGTCTGATGAACACACGTGCAAGTGCAATATAACAATGACA
TGCACCAGATAAATGTTTAAAACGGCGACTGGGCATGGCATGTTAGAAAGCTTCAAGTTTATCATATCGTGCATGGTTCA
GTAGAAAGTCTCTAGTTTATCATATCGTGCATG--------------------------------------------CTG
GTTCAGTGGCGTATAGATTTGACCCACAAAAAATCA---TTATGTTTATCATTTTGTTAACATGCATTTCTGCTATTAGT
TCTAT----------------CAGTTTTTCGAAACATGTACCTCCATGATTTTAAGCAAAAAAAAGAACCGAACCTAAAT
GAGTTCAGCTCATAGT------ATGAAGTATTTTCCAAGTGCGTCATGAGGAAAAGTAAAGCAAATGGTAGTTTCAAGTT
CAGACCGCCAATCATATTTGAAATTTT-----------------------------------------------------
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-----AACACACAAATGGTACAAAGGAATTGCAAATGGATACTAAAAAAACAGACTTTGATTTACAAAATACTAATTGCT
AGATTAACCCAAAACATATATACTAGCTTGACAGAAACTGAAGCGTTGAAAACAAA---GAGAGTTCCAAACTGTGGTAA
CCTAACATTGGTTTCATGATGTCCATCTTACAGATCCAGACGTGGAAGTAGTAGCTTTATCACCCAAGACACTCGTTGCG
ACAAACCGATACATATGTGAAGTCTGCCATAAGGGATTCCAGAGAGACCAGAACCTCCAGCTCCACAGGAGGGGGCATAA
CCTGCCATGGAAGCTCAAGCAGAGAAGCAGCACTGACGCCAAGAAGAAGGTGTATATCTGCCCCGAGGTCACCTGCCCGC
ACCATGATGCAACCCGAGCTTTGGGTGATCTCACGGGCATAAAAAAACACTTCTCTAGGAAGCATGGGGAGAAGAAGTGG
AAGTGCGACCGATGTTCGAAGAAGTATGCTGTACAATCTGATTGGAAGGCTCACACTAAGATCTGTGGCACCAAGGAGTA
CCGATGTGATTGCGGAACTATCTTCTCAAGGTATGCTTCTCAGTTCTCACTTAGGATAATCAGTTAATCACACCAAGAAT
TCAAGCGAATGCATCATTAGCCATGAAAAACAAATTCTTTA--------TCAAGGATACATGAACATTAATGTCATTCAG
TAAGATAACAGTAGATGTAGACTGAAGTACTGACATCTTGATT--ATAAAATGCAGACGCATAATCTTCAGCTAATTGCA
ACTGAAAATCACATGCTATATGTAGCTTATGTCTCTGTTGCTTACGAAAAAAAATCTTGTTTGTTAGATTAGCTTTCCAT
ATTCACACAGTTTACATACC---ATTTGAAGCAATGCATAGCAATATTTTAGCATCTGTGGCAGGCCCTGATGGGAGTAT
CATATTAGACTAGCCATTGAGCTCACCGCAGCCATGCCATTTAAAATGCAACGTTTCTTGGAACTTGACATTTAGCTCTA
CTTTATGTCAATGCAGAAAGGATAGCTTCATCACGCATCGGGCCTTCTGCGATGTATTAGCCGAAGACAACTCAAGGGTT
AACCACAGCCTTGCCACAATGGTGGGAAGTCTGCATGGTCAGCATGACATGTATTCACATGGGGTGCCTAGCCCCACTGA
TATGGTTGCAAACATGTCCAGCAACGACCATAACTCAGACATGCATCTAAGATCTTTATCTCCTTATGCTCTCATCACAA
GGAACACTGCCTTGTTCTCCAACCAGATACCACCCAAGGATCCAGGATTCCCACTTGATGGAAGTGCATCAGGCTACCCT
TACATGTCCATGAACTCCCCATACATGTCCGCGACAGCCCTGCTACAGAAAGCTGCAGAGATGGGAGCAAAGACCAGCCA
GGATCCCATTTCACCGTTGCTTTTGAAAGGCTTCGCAAACAACTTCACCAGTGCTAGAGACCATATGGGCATATCTTCTG
GAAGCCAAGGAGATTCTATGGGGAATTCAGCAGCTAACAGTGTTTGCATGAAGGCTGCTGAAGATGAGAGCATGAATGGT
CACAACAATATCTTGATCAACTCAGCATGGACCAG---CGGCATGATGACACCGACTACCGTGCCTTTAATTGGGCTCAT
GAACAATCCATTTTCCATGAGACAAGAGAAGGAGAGCCCTCAGATTATGCCTGATATCCAGACGCAGCACAACAGACAGG
AAAACATTTCAGGGGTAGGAGATGCGGGCCTAACACAGGACTTTCTAGGGTTAGGAGGCAACGGAAATTTGGATATAAGC
TCTGGGACCTATAATACGGATGTGACAGCATTGAGCTATTCCGATGAGCAACAGAAAAATCAGGAGCATATGTATTCTTA
CCATGAATCATCGCTTGACTCCACTGCATTGGACAAACCTATGTGGGATTCATGATGCTGTGATGCAAAAGGGTTTCCTT
ACTCTGG---TAGTTCAATTTCCGCTAAGCTGCCCGAGGTGCAGAATTGGCCATTAAGAAGGTATAGCATGTATGAGA--
CAGTGCACCATGTGTTTTGTTAACTTGAATATGGTCAAGAACTAGAGATACCAG-TTTATTGGCAAAATCAGAAAGTAGC
CAGGTAATCTTATCAACTTAATGGGGCCATTCGGGGAGGATTTAAGTAACTATTGTATTTTCATTTAGCAGAAATATTAA
TAAATATTTTGGAAGAAGTTGGTTCTAAACCTTGAATCGGTGAATGTAGATTGTAGATCAATCTATTCATACCAAGAATA
GTTGGGATCAACAATGTTA-------------------------------------------------------------
------------------------------------------------------TAAAAAACAGTCATTCAAAGCAAACA
ACAGAGTATTCCTTAGAGCATCTCTAGCCCTTGCCATAAACTTTAATGCCATCTCCAATGTTGGATGCTTAGAGCATCTC
CAACAGGCGCGCAAGCGCGCGGCACCCTAAAACTGTAAGAATAAATCCGAGGCCACCGTCGATCATCCGAGGACCAAGCA
ATCACACGAGGCACGACACCGAGATTTGTTAACGAGGTTCACCGATATGGCTACATCCCGGGGCTTGACTATGGGCGCTC
CTCCCCATGACACGGCTACAATACCGCACCCGGCCGCCTTGGACGCCGGCACAAGCCGCCGGCTTCCCCTGCGTTCCGGT
GCTATTATGTTGGCATAGGTTACATCGTGTGTCTAGCCCTGCTATATATGAGAGGCCTAGGATACAAGTGTCCTACTTGG
ACACGACTCCATATCCTATCTAAACACAATACAACTACAAGTCCAACTGTAACCTACCTTGTACACTATATTCGACACAA
CTCTAACAAACTCCACCTTGGCGAATATACTCCACCACCTTGAATTCGTCCATGCGTCAAACTTCCATGTACATTGGACT
TGAGTTTATCCCATGAGTACCGCTGCTACTCCAAAGACTCCATATGACTCCACCTGCAACTTGTAGTCCCTTTTTTTCTT
AAGCACAGTCAATGCTCGAGCAAAATTAAGTTCCTCTTTACTCTAGTCCGTGCTCCCAACTTTCAGAGTATCCGTCCAAC
GCCATCACACACTGATCACTAACCTGCGTGAAAGTGAACAACTCACATATTGGGCGTCACACATAAGAATTGCCTGAACT
CAACATCACCGCTCCTTTCTTGACCGCCTGTCTGAAACTTGAAGGAATTTCACCATTGCTTGTAGTCATCCCAAGTCAAA
TTCGCAGTTGTCTCACCACATATATGACCACCAGAGCCCTGGCCCGTCTCCATGTCCCGTGCGCGCCGCACGCCTCGCCG
CTATTACCGCGTCGAGCCTCCGCTGTCCCGGTCGAGTCTCAAGGGTCGCGAACCCACACCACTCAATCCCCACTGTAGAG
TACCACCGATCATCACCGACCGATGACGAGTTTCACGCTTCCATCAGACCACTGGGCTCCAGTCCGAACTGCATGTCACT
CGCTTTTCCCCTTGCTGAATAGGTTTCGATTCCCTGGATCCTTACACCGTAGCCCCTCAATCCAGCTCCACCTTCAATAT
GACTCCATGGTAGATGATCAGTCCATCCCCACGCCGCCGGCTTCCCCTGCGTTCCGGTGCTATTATGTTGGCATAGGTTA
CATCATGTGTCTAGCCCCGCTATATATGAGAGGCCTAGAATACAAGTGTCCTACTTGGACACGACTCCATATCCTATCTA
AACATAAAACAACTACAAGTCCAACTGTAACCTACCTTGTACACTATATTCGACACAACTCTAACAAAAATCATATCCAT
TCATGTAAAAAACAACAACGAAAAAAAGTGGGCGAAACCATACCTTGTGGGCATTTCATCGAACATCTTGTGCGCATCGG
CCGCCGGTGCAACAAGCGAGCTCGCCGGTGCTTCGGTGGCCGCCGCATCTGTCGCACGCTCTGCAAGTCTCTTCTTCGAC
CGCCTAGAGGAGCCGTCTGCCGCCTTGTTCTTATCCGGACACCTTGCCCGCCTTCGGCACCGCCGCATTTGGGAGCTTCG
AGAGGGGGGCCCGTGGCTTCACCGCGGGCGGCGGCGCGACGCCACCCGCCGAGGTCGTCTGTGGCGCCATGAATAGGCCG
CGCGCGAGACCGGTGCTTGGAGGAGCACCGACGGAGGCGAAGCCAAAGCTCCCCGCGCTAGGGTTTGCGCCGGCGGCAGC
GGCGAAGGGGTCGCGGGTGTAGGAAAGGGTGAGGGGGATGTCGGCGCGGCCGTCCTTCGGGCGAATTCGCCGGCGGCGGC
GAGGGGCAGGGCAAAAGTGGCGCGGTCAGAAAGGATGGCGGCAGTGTGGCGCGGGCGCTCGAGTGTGCAGCGCTCGGGAG
CGGGCGCACGAAATAAGCAGCGCGCGGTGCCGTTTAGCTCCGCGCGCTGAACCACTTATGCCGCACGCGCATTTTTTGCG
CCCAGAACAGCTGCGCGCGCAATAAATGGTAATTTTCCAGCATCGCGCTAATATCGCGCGCGTGTTGGAGATGCTCTTAT
ATAGGTGCTTTTGGTGGAAAAAATATCCAAAAAATAAAATGGAATCTAGCGTCCTTTCTTCCAATGCCAGGCGCTAATAA
CGAGCTCTAATTTCTATTAAGAT---------ATATAAGAGTATTTTTATAG----------------------------
-----------GGGAGTAGAAGGAAGGGCCCAACCCTCTCGTACGGAAAAGAATGAGCCTAGCGCTCGATGCTTTTCTTT
GCATGGACG-------------------TAAACAGCCTAAGCGACAATCTACCAGGATTTATATCCTAGCGCCCTGGCCT
TGCTCCTGCCGTTGAAGATGGCTCAAGTCCCTAGACGAACTACCCCATAAAACTTAACTCCCTCTCTCCCCTTAATTAGC
TTTCATCTGCCATGCATAGACATGGCAATGT-----------
>chr4A_139
--------------------------------------------------------------------------------
----------------------------------------------------------GCACAACCCACACACGGTCGGA
CAGCAAGCTCACGCACAAACACGCTGACACGCGCGCGCGGGCAC-------------------------ACACACGCCCG
TAATGTGGCCGCAGCCTGAC-AAAGCGCCAAATGCTAAAGCAACGAACAGACTCGAACGGCTGCAACAACGAAGAAGAAG
CAGGGTTATTACTC----GCCGGTCAGAACAAACGCGGCCAACGGTTTGTCGCTTCTCCCGGATCTCTCCCTTTGTTACT
TGTACCGTCTCCTGCCTGCTCTCGAGTACAGATACAACCATTTTTATTCATCAATCAGTCTGTCTGATGGCGACATTGTC
CCCAGAAAACTGCATTATCAGTTAAGCATCTTGGAGATCGTCCTCGACGTCGACCGCCCAATTGATTTACTTACCCAGGG
TGAAACATGACATGCACTTGATCCTCGCCCGTCGATAATTACAAGGTGCTAATCTCACTAGGAAAAACCAGCGATCTCAG
TAATCCCAGTGGTAGCTGAAATCAGGGGCCTATCTACGTACAATCTGCATGATGCACGTAACAGTACCGAACTGCGACAG
TAGGAACAAGCAGCTAAAGACTACTTTTCTCTTCATTTTTATTTATGTCT--------------------GATCTGGGGG
AAATTCATGTGAAATAAATAAGATAAACAGAACATTCCGTGCCAAGGAGGAAACCAGATTCTGATTCCATTGTTTT-CTA
ATACTGAACGCGAGCATTGCCGTCCTTGACACGGACTGGGAGGGGATTTTCGCCGTTTACCTGCTGTCCGGTTGCAGTCT
CACCGTTGTGCATAAAATCCAGCATCCACCCCTCACTACGCTGGCACCCTCTGGAACAGCCAGCAACTCAAGTCCCCAAC
---AATGTCGCACACGTCCGAGGAAGAGTCCCTGAGCAGCTTCCAGCAGCAACCGAAGCTCGAGGTCGGCGCGGCGGGGC
CGAGCAGAGGCGACCCGGCGGCCATGCCCGTGGTGAAAAAGAGGCGAGGTCATCCAGGGAATCCAGGTATATATGTTGCC
TCAACTCAAGTT---------------TCAACTATTGTTGGTCTGATGAACACACGTGCAAGTGCAATATAACAATGAGA
TGCACCAGATGAATGTTTAAAATGGCGAC--------------------------------------CGTGCATGGTTTG
TTAGAAAGTCTCAACTTTACCATACTGTATCTTTCTTAC---TACCTAGCAACTGAGATATGGAAGATCAAATTGTCCTT
GTTCAGTGTTGTATAGATTTGACCAACGAACTCATGATGTTATGTTTTACTGTTTCATAACAGAAATTTATGTTATTAC-
------TTCTATATTTATCTACGGTTTCTCAAAACATGTAGCTCTATAGTTTAAAGAAATAAAAAAACACGAACCTGAAT
GAGTTCCGCCCATAGGAGTATGATGTAGTATTTGCCAACTC-AGCATCACAAAA--TAAAGCAAATTGTAGTTTCAAGTT
CAGACCGCCAATCACATTTCTAATTTT-----------------------------------------------------
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-----AACACACAAATGGTACAAAGGGATTGCAAATGGATACTAAAG-AACAGACTTTGATTTACAATACTG-AATTGCT
AAATGAACCCACAACATACTAGCCAGGT---CAGAAACTGAAGTGATGAACAAAAAAAAGAGTGTTCCAATCTGTGGTAA
CCTAACATTGGTTTCATGATGTCCATCTTGCAGACCCAGACGTGGAAGTAGTAGCTTTATCACCCAAGACACTCGTTGCG
ACAAACCGATACATATGTGAAGTCTGCCATAAGGGTTTCCAGAGAGACCAGAACCTCCAGCTCCACAGGAGGGGTCATAA
TCTGCCATGGAAGCTCAAGCAGAGAAGCAGCACTGACGCTAAGAAGAAGGTGTATATCTGCCCCGAGGTCACCTGCCCGC
ACCATGATGCAACCCGAGCTTTGGGTGATCTCACCGGCATAAAAAAGCACTTCTCCAGGAAGCATGGGGAGAAGAAGTGG
AAGTGCGACCGATGTTCGAAGAAGTATGCTGTCCAATCTGATTGGAAGGCTCACACTAAGATATGTGGCACCAAGGAGTA
CCGATGTGATTGCGGAACTATCTTCTCAAGGTATGCTTCTCACTTCGGA---------------TAATCACACCAAGAAT
TCAAGCAAATGCATCGTTAACCATGAAAAACAAATATTTTTATCAAGGATACAT-----ATGAACATTAAGGTCATTCGG
TAAGACAACAGTAATTGTAGACCGAATTACTGACATCATTTTTTTACAAAATGCAGACGCATAATCTGCAGCTAATTGCA
ACTGAAAATCACATGCTATATGTAGCTTATGTCTCTGTTGCTTACGAAGGAAAATCTTGTTTGTTAGATTAGCTTTCCAT
ATTCACACAGTTTACATACTA---TTTGAAGCAATGCATCGCAATATTTTAGCATCTGTGGCAGGCCCTGAT--GAGTAT
CATATTAGACTAGCCATCGAGCTCACCGCAGCCATGCCATTTAAAATGCAGCATTTCTTGGAACTCGACATTTAACTCTA
CTTTATGTCAATGCAGGAAGGATAGCTTCATCACGCATCGAGCCTTCTGCGATGTATTAGCCGAAGACAACTCAAGGGTT
AACCACAGCCTAGCTACAATGGTGGGAAGTCTGCATGGTCAGCATGACATGTATTCACATGGGGTGCCTAGCCCCACTGA
TATGGTTGCAAACATGTCCAGCAACGACCACAACTCAGACATGCATCTAAGATCATTATCTCCTTATGCTCTCATCACAA
GGAACACTGCCTTGTTCTCCAACCAGATACCACCCAAGGATCCAGGATTCCCACTTGATGGAAGTGCATCAGGCTACCCT
TACATGTCCATGAACTCCCCACACATGTCCGCGACAGCCCTGCTACAGAAAGCTGCAGAGATGGGGGCAAAGACCAGCCA
GGATCCCATTTCACCATTGCTTTTAAAAGGATTCGCAAACAACTTCACCAGTGCTAGAGACCATATGGGCATATCTTCCG
GAAGCCAAGGAGATTCTATGGGGAATTCAGCAGCTAACAGTGTTTGCATGAAGGCCGCGGAAGATGAGAGCATGAATGGT
CACAACAATATCTTGATCAACTCAGCATGGACCAGTGGCGGCATGATGACACCGACTACCGTGCCTTTAATTGGGCTCAT
GAACAACCCATTTTCCATGAGACAAGAGAAGGAGAGCCCTCAGATTATGCCTGATATCCAAACGCAGCACAACAGACAAG
AAAACATTTCAGGGGTAGGAGATGCGGGCCTAACACAGGACTTTCTAGGGTTAGGAGGCAACGGAAATTTGGATATAAGC
TCTGGGACCTATAATACGGATGTGACAGCATTGAGCTATTCTGATGAGCAACAGAAAAATCAGGAGCATATGTATTCTTA
CCATGAATCATCGCTTGACTCCACTGCATTGGACAAACCTATGTGGGATTCATGATGCTGTGATGCAAA-CGGTTTCCTT
ACTCTGG---TAGTTCAGTTTCAGCTAAGCTGCCCGAGGTGCAGAATTGGCCATTAAGAAGGTATAGCATGTATGAGAGA
CAGTGCACCATGTGTATTGTTAGCTTGAATATGGTCAAGAAATAGAGATACA-ATTTTATTGGCAAAATCAGAAAGTAGC
CAGGTAATCTTATCACCATAACCAGGCCATTCAGGGCAGATTTAAGAAACTATTGTATTTTCATTTAGCATAAATATTAA
TAAATATTTTGGAAGAAGTTGGCACAAAAATTTGATTCGGTGGATGTAGATTGTAGATCAATGTATTCAGCTCAAGAATA
GTTGGGATCAACAATGTTA-------------------------------------------------------------
------------------------------------------------------TA------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------
>SNPs
-------------S------------------------S-S----------------------------------S----
---------------------S---------------------SS-----------S-------S---------------
----------S-S-----------------------------S-------------------------------------
S------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------S-----------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------S-S---------------------------------------
--------------------------------------------------SSSSSSSSSSSSSSSSSSSS----------
---------------------S----S-----------------------------------------S-----------
-----------SS-------------------------------------------------------SS----------
------------------------S--S-S------------------------------------------SS------
---------------------------------S--------------------S-----S-------------------
----------------------------------------------------------S---------------------
-------------------------------------------------------S--------S---------------
-------------------------S--S----------------------------------------------S----
------------------------------SS------SSSS-----S--------S---------------S-------
---------------------------S----S--------------------S--S--------------------S--
-S-SSS-----------------------S---S----------------------------------------------
--------------------------SS------------SS----------------------S---------------
---------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSS------------------------------S--------------S---S-----------------------S-
--SS--------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------S---------------S-------------
-------------------------------------------------------S-------S--------------S-
-S--S--S--S-----------------------S---------------------------------------------
--------SS-------------------------------S-----------------------------S--------
------S--------------S-----------------------S----------------------------------
-------------------------------------S----------S-------------------------------
---S--------SS--------------------S--S-S-----------------------S----------------
-------------------------------------------------------S---------------S--------
---------------------SS----------------S----------------------------------------
-----------------S---------------------------------SS---------------S-----------
--------S----------------------------------------------------S------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------S-----------------------------------
S---------------------S---------------------------------------------------------
----------------------------------------------------------S---------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------------------------
------------S---------------------------------------------------S---------------
-----------------------------------------------S--------------------S-----------
------S-----------------------------------------------------------------S-------
-------SSS-----------S--------------------------S-------SS----------------------
---SS-----------------------------------------S-SSS-S--------------S----S-------
----S---------------------S---------S-------------------------S---S--------S----
------------------------------------------------------------------------S-------
-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------------------
----------------------------------------------S---------------------------------
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-----S--------S---------------------------S-----------------------S-------------
-SS----S----S------SSSSSSSSSSSSS----------S----S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSS----------S------------------------S-----S---------------------------
----S--S-SSSSSSSSSSSSSSSSSSS------------SS---------------------------S----------
S------S---------------S---------------------SS---------------------S-----------
-------------------------S-----SSSSSSSSSSS
>forward_1033
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------GAACAGCCAGCAACTCAAGC-------
--------------------------------------------------------------------------------
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>reverse_2147
--------------------------------------------------------------------------------
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------------------------------------------------------------------CGGAGGGGTCATAA
TCTGCC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1752
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------GTGGCTACTTCTGGCTGGAG--------
--------------------------------------------------------------------------------
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>reverse_3572
--------------------------------------------------------------------------------
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---------------------------------------------------CGATATCCAGACGCAGCACA---------
--------------------------------------------------------------------------------
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>forward_1789
--------------------------------------------------------------------------------
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---------TGTGTGTTGGTTGCCTTTGC---------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3613
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------------AGGTAGGAGATGCGGGCCTA------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1790
--------------------------------------------------------------------------------
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----------GTGTGTTGGTTGCCTTTGCT--------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
>reverse_3728
--------------------------------------------------------------------------------
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-----------------------------------------------CCAACAGAAAAATCAGGAGCAA-----------
--------------------------------------------------------------------------------
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------------------------------------------
>forward_1817
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------TAAAAAGTTGGGGCAGGGGG-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3862
--------------------------------------------------------------------------------
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---------------------TAGCTAAGCTGCCCGAGGT----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------
