>input_sequence_29800
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-GCGAGGCCTCGCCGCAGATGGCAGTCCCCGGCGGCCGCAACGGCCTCGTCGAGGACGACGACGTCGCCGACCAGGCCGG
CGCCTTCGTCGCCCCCTCCGACGACGAGGAGGCGCCGCTGCCCCCCCACCTCCAGGCTCTCTCCGACGCCGCCCAGAACG
GCGACGTCAACGCCCTCCGCACCGCGCTCGGTACCGGCTTAATTCCGCCCCCCTGAATCTGGATTATACTTTTAGGGTTC
TACGAGGTTGTTTGATTAGAGCAGAGTACGC-------------------------------------------------
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--------------GTACCATATCGATTAATTCACTAGCCAGACCGCCGCTTTTCATGGCGTCCCGGTGAAAATTGCAGA
TGTTTCAGCGTATAGTTTAGTGATACTGCCTGAACCTATGGCCTTGTC-------AGCGGATCGGGTTGTATTTTCTACC
TGGATTTTCCTGGTGCAAGTCTTGTGTTGGATGATTGCGATGTATGGGTTGTGTTCGGGTCGCTTCTGCACACGCCCTCT
GTGTGCTTCCATCAGCTCAGTGACCCAGGAACAAAGTCTTCACTTAGTCCAGTAGCACTAGGATGCATTTCTGCGTGTGG
AATTACCACATATATGTATGATAAGCTATAAATTTTGTTGCTGGAATCTAGGACATATATGTTGTAGAAAACGTGGCGAC
TTAACCTGCCAATGGCATCTCTTATTATTACAATCGATTTAGAGCCATCCGGGTAATGCTGTATTTTTTATTTTATCTTT
GTGGGAGACAGGGGATGCTGTATTATGCCAAGGAAGCAACAAAATGTTTGTTGGAG----AAAAACGTTTGTTAGTGTTT
AATGGAATGAAACAATTTGCTGTATGGCTCTTGAGATGATATT-------------------------------------
-----------------------------------------------------------TGTCTATCAGTTGGT--T--C
TAAAATTAGCAAAACACAAGCATTTTTTAAAAGCCATCCTATTATGTCAAAACACAATTTAAATTTCCTTGCCTAACCCT
AGAAAATTTGAAGGACAACTCTAGTTTGGGAATCTTAGCTTGTTTATTTGAATTGCTTGCTATGCTTGCTTGGCTGGCAT
GTCGGCTGTGTTTGGTTGATGCTCACACTAGCCTACCAAATGTTGGTAAGAGGTGGCTTGCCAATTTTTTGGTCAAGGAA
TTCCTCACCCTCATTTGGCCAACTATTTAGCAAAAATCTGTGAGAGGAATGGTGGATACCCATTGGCAACCAAAAATTTG
ACTGCAAACCAGACAATGACCAAGATTTGATAGGCACCCAGTTTTTTGGCAGGGC-----TAGTATGGGCAGCAAACCAA
ACAGACCTTT---CCCATGAATGTTATCAATCTTCATTAGGTCTCA------TCTTCAGAACACCCCCTTGTGGTGATTT
TTATGGTTACCTT-GAAAATTTGTAAGGATATAATCTCCATTGTTTAGGAACATATATTCGTAAAAAGAAAGTACTTCTA
TGTTTTTTAGTCTTGTACTAGCATACGTAAATTAATAGTTCTTAAATTGAAACTTAAACAAGGGAAATGCTATTGCTGGG
GTAGAGCTGGGTACATAGGTTGGATGCTTATCTTACATGGTTATTGTCAA-GTTCTCTCTTCAAGTTTGTCTAAGTGATC
GTTATCAGATCTCACTCTTGCAGTGTTACAATCATATAACGATTAGTTGAGGTCCGTATGGTGATTGTCTAACCATCTCA
GTGTGTCGGGCCATATTGCTGCACTGGTTCAAAACTCTTGTTGCTAAACTATTTTGTCTTCATACTTTACTTTTTTTGGT
CAGTCTAACCTGCTTTAATGGTGGTGTTTTTGCCAATTATTTGCAACAGAAAAAAA------------------------
----------------------------------------------------------------CATGCCTGCATATGTG
GCTGATATCGATGGAGCTCTTTATTTAGATTCCACTGTTATGTTTACACAGATAACTATGGTGGCAGCATTGATGATCCA
GTTGAAGATGGTGATACTGTGCTTCACCTGGCATGCTTATATGGACATCTACCTTGCGTGCAGGTTTACATTTTCCTTG-
--------------GCCTTTTTAGTCATTTTTCTCCGCTCAATGGTTGTATCTAACCAGGTTCATCTTGTCAGCTACTGC
TGGAACGTGGAGCAAACTTAGAGTGCAAAGATGAAGAAGGGGCAATTCCTCTCCATGATGCTTGTGCTGGAGGTATGCAT
TCTTTTAATTGCAGTGAGCTGTTTTTTTTTCCTTTTTGCACTCAATGTGTTTAGTTTATTTACTGACACTCTTTGTACAG
GCTTCACTGAGATAGTTCAGTACATTCTCAGTTTTGCTGCAAATGCTGAGGGTTGTGCAACGCGAATGCTCAACACCGTT
GATGCTGAAGGCGATACTGTAAACCCTCTTGACCACTCGATCATATGCCAACCATGTTGATTTTGCAGCAAATGTGCCAT
CGGCGTGGTCTTATAACCTTATGTGTTTGCTCCGTGCAGCCACTCCACCATGCTGCCAGAGGGGAACACATGGACACCGT
CAAGCTTCTGCTCGAAGCTGGCGCATGTCCCAAGAAGGAGAATGCCTACGGGCAGGCAGCCGCCGAGATGGCCGATCAAG
ATACCGAAGTCCGGGCCCTGTTAACCGCCAAGCAAGTCGAGGCCAGCATACATATGGCGGACTGATGATGGACCTGTCGG
AGG-AACCATTGGTTGATATCAGTC--ATGATGAGTGGGCAGTAAAATGAGTGGTAGTAT--------------------
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>chr4D_1_TraesCS4D01G308500
TGTGTTTTGCTCACTTAATATTGGTACTCCATAATTTTGTGTTGTCACAACTATCGAAACATGCATGCAACTCAACGTGA
AAAAAGGTCTTTAACTTGTGAATGTTTGGTGATCTTTTGAGGGGT--TGATGATCTTCCAACTAGCATCTTTGGGATAAC
ATACAATTAT-GTCTTCATAAAAAAATAATCTCTTTATCTTATTTTCATA---------------------AAGTCATCA
ATG--TACACGGCCGGTCTAAACACATCTTCACCTCATCTACATTAGCTTTATTCGTACACATCTTCCTCCTCTTTGTGA
A-TCTCCATCTGTGATATGAGTAGCCATATCTTTTTTTTTCTCATATGTGATAGTCATTTCCTTTGTATCTAGATTTACT
ATTCACATATCTTATTACCCCTCATAATAATTGTTTGGTGTGGTTTTCATTAATCATCGCCTTAGGCAATGGATTATGAT
AATGGTGATTGATTGACTATGGCGACAGTGTGCCGATGATGCAACGACCGATTGCGATCATGGCAGAGGTTAAAATCACA
ACCTTGTTGGCAACACCTCCAACCATCTTCTC-TAAGTTCCCAAGAGAGCGGCAAAATGAAATGGGGAAGACACC-ACCG
TCAAACTCATGGAAGCACAATGAGACGGGAGGATGAAGAGT-GAGGAATAGTACGAAAGAGGAGAGGGGTGGGGAGAGGG
GTGGCAGGGTGCGTCTTAGAGCATCGCTAGCAGATCCCATAAACCGGGCCATCCGGCAAAAAATCGCCGGTTTACGGGAC
GGA-----------------------------------------------------------------------------
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-------------GGCGAGGATGACCTAACTATCTATTTCCCATATATATCA-CGTTTTATTCCGTATGATCTAGAGCGT
TTGTTTCTGATCCGACGTCGCGAGATAAAAGGGCACACGCCGCCTAGGTAGGTTTTTCGTCCCCGCGAGCTCTCGACACA
AGTCTCGACCGCAGCCGCCGTCAGAGCGCAGCACACGCTCGCGAGCCCACCGAAGCCCAGGCGCGCGGAGACCCAGACCC
AGCGAGGCCTCGCCGCAGATGGCAGTCCCCGGCGGCCGCAACGGCCTCGTCGAGGACGACGACGTCGCCGACCAGGCCGG
CGCCTTCGTCGCCCCCTCCGACGACGAGGAGGCGCCGCTGCCCCCCCACCTCCAGGCTCTCTCCGACGCCGCCCAGAACG
GCGACGTCAACGCCCTCCGCACCGCGCTCGGTACCGGCTTAATTCCGCCCCCCTGAATCTGGATTATACTTTTAGGGTTC
TACGAGGTTGTTTGATTAGAGCAGAGTACGC-------------------------------------------------
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--------------GTACCATATCGATTAATTCACTAGCCAGACCGCCGCTTTTCATGGCGTCCCGGTGAAAATTGCAGA
TGTTTCAGCGTATAGTTTAGTGATACTGCCTGAACCTATGGCCTTGTC-------AGCGGATCGGGTTGTATTTTCTACC
TGGATTTTCCTGGTGCAAGTCTTGTGTTGGATGATTGCGATGTATGGGTTGTGTTCGGGTCGCTTCTGCACACGCCCTCT
GTGTGCTTCCATCAGCTCAGTGACCCAGGAACAAAGTCTTCACTTAGTCCAGTAGCACTAGGATGCATTTCTGCGTGTGG
AATTACCACATATATGTATGATAAGCTATAAATTTTGTTGCTGGAATCTAGGACATATATGTTGTAGAAAACGTGGCGAC
TTAACCTGCCAATGGCATCTCTTATTATTACAATCGATTTAGAGCCATCCGGGTAATGCTGTATTTTTTATTTTATCTTT
GTGGGAGACAGGGGATGCTGTATTATGCCAAGGAAGCAACAAAATGTTTGTTGGAG----AAAAACGTTTGTTAGTGTTT
AATGGAATGAAACAATTTGCTGTATGGCTCTTGAGATGATATT-------------------------------------
-----------------------------------------------------------TGTCTATCAGTTGGT--T--C
TAAAATTAGCAAAACACAAGCATTTTTTAAAAGCCATCCTATTATGTCAAAACACAATTTAAATTTCCTTGCCTAACCCT
AGAAAATTTGAAGGACAACTCTAGTTTGGGAATCTTAGCTTGTTTATTTGAATTGCTTGCTATGCTTGCTTGGCTGGCAT
GTCGGCTGTGTTTGGTTGATGCTCACACTAGCCTACCAAATGTTGGTAAGAGGTGGCTTGCCAATTTTTTGGTCAAGGAA
TTCCTCACCCTCATTTGGCCAACTATTTAGCAAAAATCTGTGAGAGGAATGGTGGATACCCATTGGCAACCAAAAATTTG
ACTGCAAACCAGACAATGACCAAGATTTGATAGGCACCCAGTTTTTTGGCAGGGC-----TAGTATGGGCAGCAAACCAA
ACAGACCTTT---CCCATGAATGTTATCAATCTTCATTAGGTCTCA------TCTTCAGAACACCCCCTTGTGGTGATTT
TTATGGTTACCTT-GAAAATTTGTAAGGATATAATCTCCATTGTTTAGGAACATATATTCGTAAAAAGAAAGTACTTCTA
TGTTTTTTAGTCTTGTACTAGCATACGTAAATTAATAGTTCTTAAATTGAAACTTAAACAAGGGAAATGCTATTGCTGGG
GTAGAGCTGGGTACATAGGTTGGATGCTTATCTTACATGGTTATTGTCAA-GTTCTCTCTTCAAGTTTGTCTAAGTGATC
GTTATCAGATCTCACTCTTGCAGTGTTACAATCATATAACGATTAGTTGAGGTCCGTATGGTGATTGTCTAACCATCTCA
GTGTGTCGGGCCATATTGCTGCACTGGTTCAAAACTCTTGTTGCTAAACTATTTTGTCTTCATACTTTACTTTTTTTGGT
CAGTCTAACCTGCTTTAATGGTGGTGTTTTTGCCAATTATTTGCAACAGAAAAAAA------------------------
----------------------------------------------------------------CATGCCTGCATATGTG
GCTGATATCGATGGAGCTCTTTATTTAGATTCCACTGTTATGTTTACACAGATAACTATGGTGGCAGCATTGATGATCCA
GTTGAAGATGGTGATACTGTGCTTCACCTGGCATGCTTATATGGACATCTACCTTGCGTGCAGGTTTACATTTTCCTTG-
--------------GCCTTTTTAGTCATTTTTCTCCGCTCAATGGTTGTATCTAACCAGGTTCATCTTGTCAGCTACTGC
TGGAACGTGGAGCAAACTTAGAGTGCAAAGATGAAGAAGGGGCAATTCCTCTCCATGATGCTTGTGCTGGAGGTATGCAT
TCTTTTAATTGCAGTGAGCTGTTTTTTTTTCCTTTTTGCACTCAATGTGTTTAGTTTATTTACTGACACTCTTTGTACAG
GCTTCACTGAGATAGTTCAGTACATTCTCAGTTTTGCTGCAAATGCTGAGGGTTGTGCAACGCGAATGCTCAACACCGTT
GATGCTGAAGGCGATACTGTAAACCCTCTTGACCACTCGATCATATGCCAACCATGTTGATTTTGCAGCAAATGTGCCAT
CGGCGTGGTCTTATAACCTTATGTGTTTGCTCCGTGCAGCCACTCCACCATGCTGCCAGAGGGGAACACATGGACACCGT
CAAGCTTCTGCTCGAAGCTGGCGCATGTCCCAAGAAGGAGAATGCCTACGGGCAGGCAGCCGCCGAGATGGCCGATCAAG
ATACCGAAGTCCGGGCCCTGTTAACCGCCAAGCAAGTCGAGGCCAGCATACATATGGCGGACTGATGATGGACCTGTCGG
AGG-AACCATTGGTTGATATCAGTC--ATGATGAGTGGGCAGTAAAATGAGTGGTAGTATTAGACTATTAGTATCATCAT
ACACAGCTTGCCTAGTATGAGAATTGCATTTCTGTTGTCACCAGAACTATGGAGTT-ATCTGCAGAGAGGAGGACATGGT
GTTTCTCCATTTGCCCTTTGTATCTGTATTTTTCGAGTTATATCAAAGGCACAATCAGTTGAACCCTTATGC-CCTGCTT
TTCCAGCATGATTA---CTCTTACTCTTGTGAGAGTTTTGAAGAAGGAAATATTTCGTCCATGACAACCTGAGACTGAAT
TGCTTAAGTTACTCGCGGCGTGTTTGGTGGAGTCC--GAGAATTTTGAAGGAGGCTTGAATGTTCAACAGCTTGCATTCT
TATGTGTTTGGTGGCAAAAC-AATGAATTTCTGCAAAAAAAATA-------TTATTACAATTCTAACACAGTTTATATTG
TAGATCGCCGCAATTCTAGATGGCAGTGAGTAGAGCTCATCGGTTTGTGTCCTTAATCTATGAAAATTCT----------
--------ACATTGGAAAGAGCAGCAATGTTGTTTGCCTTGTTCTTTGATACTTGGTTCAATGTTTTCCATGTCTAGAGC
AGTAATGCAAT-------------------------------------------------------TTTTTTTTTCATTG
TTACTCCCTCTGTACACTAATATAAGACGTTTTAGATCACTAAAGTGTA-------------------TAGTG-------
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---------------------TACAAAGGGAGTAGTACATGCTTGTGGTGGCATTCTTACAATATCAGGAACAAGGTAAC
TACACCGAACTCGTATA---CATGCTATCAAACAAAATCTCAGCTTAGC------------------ATGGATGCTACCA
CACCAAT------AGGTATGTACTCGGGCATGTCTAGAGCCAGCATGTCTCGATGGAGAACAAGGGCGAGAAGGCCACCA
AACACACCCTCGTGTTCACAAGGCGTGGAGTCTGTTGCTACGCTTTTACCATGGTATAAGAGGATGAAATCGTGATTTTT
GTCTTCTACAG---------------------------------------------------------------------
---------------------------------------------------------------------AGATATGGTTA
TGTTTCTGATATGGTGTGATACATCTCTTTCTCAAAATTAAATACCAAAGAAACCTAATGCACATTAATTGTAAAAAATG
>chr4A_25
------------------------TACTCCATAATTTTGATTTGCCACAACTACCTGAACATACCTGCAACTCAAAGTGA
AAAAGGTACTTTAACTTGTGAATGTTTTGTGATTGTCGAGGGGTTGCTGACCATCTTCCAACTAGCATCTTTGAGACAAG
ATATAATCAGCGTGTTAGCAAAAATTTAATCTCTAAATTTAGGTTTTTTTAGACTCCAAATTTATTTTGTTAAGTCATCA
AATTATATACTACGGGTCTAAATACACCTTCATCCAAACTCCATCAGCTTTGCTCCTACACACCTTCCTCCTCTTTGTGA
TTTCTCCATTGGTGATATGAGATTCCATATCCTTTTTCCA---ATAGGTGGTAGTCATCTTCTTTGTACCTAGTATTACT
ATTCACAAACCTTATTACCTGTCACAATAATTATTCGGCATGGCTTTCACTGATCGTCGCCTTATGCAATGGATTATGAC
AATGGTGACTGATTGACTATAGCGATGGTGTGCCAATGGTGTAACGATCGGCTGCAATCGTGGCAAGGGCCG-AACCACA
GTCTTGTTGGCAACACCTCCAACCATCTTCTC------------------------------------------------
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>chr4B_364
TAGATTT-------------------------------------------------------------------------
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------------------------------------------------------------------------------CT
ATTCACATATCTTATTACCCCTCATAATAATTGTTCGGTGCGGTTTTCACCGATCATCGCCTTACGCAATGGGTTATGAC
AATGGTGACTGATTGACTATAGCAATGGTGTGCCAACGATGCAATGACCGGCTACAATCATGGCAAGGGTCGAAATCACA
AGGTTGTTGGCAACACCTCCAAGCATCTTCTCCTAAGTTCCTAAGAGGGCGGCAATATGGAATGGGGGAAGACACTACCG
TCAAACTCATGGAAACACAATGAGACGGGAGGATGAAGAAAAGAGGGATAGTATGAAAGAGGAGAGGGGTGTCAAAATAG
------GGGTGTGCCTTCGAGCATCTCCAGCCGCACCCCCAACTGGCCCCCACGGCGCCTTTTTTTCTACCGGCGCAAAA
AAATTCGCCCAGTCGCGCCCCCAGGACGTCAAATTCCATCGATCCAGGCCATTTTGCGCCCGGCGATCCCAGGCCGAACC
CCATCGCACTAGGGGGCACTTGGAGGCTCCGGCGAAAGGAAAAGTGGCGCGTGGAGCACCACTGTCAGGCGAAAAACGCA
TTTTCCCCGCCCAGATTCGACCCACGCGCAGAAGAACACCACTTCCCTTTTCGCCGCCATGCCGATACCAGCGCCACCTC
TCTGCCCACAACCGCTACTCCGCTGCTAGAAAGGCCATTCCCTCGCCTAAAAGAGAGGGTTTCGCCGCGACAGCCTCCAT
CCCGCTCCTGGTCGATCTTTCCAGGATTTTGACCACGCATGCGAGGATACCGGCGGCTACCCGCCCACCACGCCCATGAG
GTGTTCGACGATTTGCTTGCTCGACGATGGACTCCGACGACGAGGAGGCGTTCGCAGCTCTGATGGAGGAGGAAGCTAGG
CCAACACCGACGACGAAGAACACCTCATGATCCTCGCCGCTCTGTCCGGCCTGTTCGTGAAGAATGCAAAGTCGTTGCAA
GGTGGCTCAGCACCGGGCCGCCACAAGAGCAAGCAGAGGCATCAAATGGAGGGCTATTGCTTCCTCTATGCCGACTACTT
CGCCAATGATCCACTACACGGCGAGAAAGTATTTCAGCGCCGTTATCGGATGAGCCGGAAGCTCTTCCTCAAGATTGTGA
GTGCCATCCGGGAGTTCGACAACTATTTCATTTGAAAGAGGGATTGCACCGGCCCAGTTGGATTCTCCTCACTCCAGAAG
TGCACGATGGCTATGAGGATGCTTGCATATGGAGCTCCCGGTGATATACAAGAAGACTATGGACGCATGGCCGAGTCCAT
CACCATTGAGTGTTTGTACAAGTTTTGCAGGGTAGTGGTGGAAGTGTTTGGACCACAGTACTTACGATCGCCCAATGCTG
AAACACTGCTCAGATCCTAGCACAGAATGAAGCAGGAGGATTTCCTCGGATGCTTGGAAGCATCCACTGCATGCATTGGG
TATGGAAAAACTGTCCATTTGCTTGGTAGGGGATGTACAAAGGCGCGAAAGTAGGTTGCAGTGTGGTACTTGAGGCAGTA
TCTACACATGACCTCTGGATTTGGCACTCCTTCTTTGGTATGTCAGGAACTCACAATGACATCAGTGTCCTGCAGTGCTC
AAATGTCTTTGGCAAGCTTGTTGAAGGTCATGCTCCTCCGATGAACTTAGACGTCAATGGGCGCCACTACAATAAGGGAT
ACTACCTAGTAGATGACATCTATCCAAGATGGTCAACATTTGTGAAGACTATCTCAAACCCAGTCCAGGAGGCAATAACT
CCTACTTTGCTAAGTGTCAGGAGGCTTGCAGGAAGGATCTCGAGCGGGCATTTGGTGTGCTCCAATCTCGATTTGCTGTT
GTCCGGTACCCCGCTCTAACCTGGTCGAAATATCAGATGTGGGAGGTGATGAATTGTTGTGTCATCTTGCACAACATGAT
TATTGGGAGCGAGCAGGGCGAGCCAGTGTTTGACACTGAACCATATTTCAGGCAGGGTCCTCTTGCAACTGTTGATCACC
AGGTACCAGCGGCATGGGTTGCCTTTCTCAATATACGTCAGGAGATCCGAGACCTACAAGTGCATCAAGAACTACAACAC
GATCTGGTGGAGCACCTATGAAGGCTCAAGGGCAACACATAGTTTGATGTGTTTTAATTCGTGTTTGAATTATGAGCTTG
CGCCATTAAACTATTTGATTTGTATGGATTTCTGTGATGAACTATGTGATAAAAAATATTTATTTATTGAATTTGTGCCG
AAGTGTAACGAATTTGTGCCGAATCTGAGTTGAAACTCGGCAGCTGGGGCCGCAACTTGGGGGACGGCTGGGAACCAGAG
CCCCGACATCGAAAATAGTGCCGACAAGCCACCAAGACGCGCTATTTTCCGCCTAAAAACGCTCCGGGCGCGAAAGGCTC
GAGATGCTCTTAGGGCTAGGATGACCTAACTATCTATTTCCTGC--ATATGATCATTTTGTTCCGTATGATCTAGAGCGT
TTGTTCCTGATCCGACGTCGCCAGAT-AAAGGGCACACGCCGCCTAGGTAGGTTTTTCGTCCCCGTGGGCTCTCGACACA
AGTCTCGACCGCAGCCGCCGTCAGAGCGCAGCACACGCTCGCGAGCCCACCGAAGCCCAGGCGCGCGGAGACCCAGACCC
AGCGAGGCCTCGCCGCAGATGGCAGTCCCCGGCGGCCGCAACGGCCTCGTCGAGGATGACGACGTCGCCGACCAGGCCGG
CGCCTTCGTCGCCCCCTCCGACGACGAGGAGGCGCCGCTGCCTCCCCACCTCCAGGCCCTCTCCGACGCCGCCCAGAACG
GCGACGTCAACGCCCTCCGCACCGCGCTCGGTACAGGCTTAATTCCGCCCCCCTGAATCTGGATTATACTTTTAGGGTTC
TACGAGGTTGTTTGATTAGAGCAGAGTACGC-------------------------------------------------
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--------------GTACTGTATCGATTAATTCACTAGCCAGACCGCCGCTTTTCATGGCGTCCCCGTGAAAATTGCAGA
TGTTTCAGCGTATAGTTTAGTGATCCTGCCTGAACCTATGGCCTTGTCACTTGTCAGCGGATCGGGTTGTATTTTCTACC
TGGATTTTCCTGGTGCAAGTCTTGTGTTGGATGATTGCGATGTATGAGTTGTGTTTGGGTCGCTTCTGCACACGCCCTCT
GTGTGCTTCCATCAGCTCAATGACCCAGGAGCAAAGTCTTCACTTAATCCAGTAGCACTAGGATGCATTTCTGCGTGTGG
AATTACCACATATATGTATGATAAGCTATAAATTTTGTTGCTGGAATCTAGGACATATATGTTGTTGAAAACGTGGCGAC
TTAACCTGCCAATGGAATCTCTTATTATTGCAATCGATTTAGAGCCATCCGGGTAATGCTGTACTTTTTATTTTATCTTT
GTGGGAGACAGGGGATGCTGTATTATGCCAAGGAAGCAACAAAATGTTTGTTGGAG----AAAAACATTTGTTAGTGTTT
AATGGAATGAAACAATTTGCTGTATGGCTCTTGAGATGATATT-------------------------------------
-----------------------------------------------------------TGTCTATCAGTTGGT--TTTC
TAAAATTAGCAAAACACAGGCACTTTTTAAAAGCCATCCTATTATGTC-AAACACAATTTAAATTTCCTTGCCTAACCCT
AGAAAATTTGAAGGACAACTCTAGTTTGGGAATCTTAGCTTGTTTATCTGAATTGCTTGCTATGCTTGCTTGGCTGGCAT
GTCGGCTGTGTTTGGTTGATGCCCACACTAGCCTACCAAATGTTGGTAAGAGTTGGCTTGCCACTTTTTTGGTCAAGGAA
TTCCTCACCCTCATTTGGCCAACTATTTAGCAATAATCTGTGAGAGGAATGGTGGACACCCATTGGCAACCAAAAATTTG
ACTGCAAACCAGACAATGACCAAGATTTGATAGGCACCCGATTTTTTGGCAGGGC-----TAGTATGGGCAGCAAACCAA
TCAGAC---CTTCCCCATGAATGTTATCAATCTTCATTGGGTCTCA------TCTTCAGAACACCCCCTTGTGGTGATTT
TTATGGTTAACTT-GAAA-TTTGTAAGGATATAATCTCCATTGTTTAGGAACATATATTCGTAAAAAGAAAGTACTTCTA
TGTTTTTTAGTCTTGTACTAGCATACATAAATTAATAGTTCTTAAATTGGAACTTAAACAAGGGAAATGCTATTGCTGGG
GTAGAGCTGGGTACATAGGTTGGATGCATATCTTTCATGGTTATTGTTGA-GTTCTCTCTTCAAGTTTGTCTAAGTGATC
GTTATCAGATCTCACTCTTGCAGTGTTGCAATCATATAATGATTAGTTGAGGTCCGTATTTTGATTG-CTAACCATCTCA
GTGTGTCGGGCCATATTGCTGCACTGGTTCAGAAGTCTTGTTGCT-----------------------------------
----------------------------------------------------AAAA------------------------
----------------------------------------------------------------CATGCCTGCATATGTG
GCTGATATCGATGGAGCTCTTTATTTAGATTCCACTGTTATGTTTACGCAGATAACTATGGTGGCAGCATTGATGATCCA
GTTGAAGATGGTGATACTGTGCTTCACCTGGCATGCTTATATGGGCATCTACCTTGCGTGCAGGTTTACATTTTCCTTG-
--------------GCCTTTTTAGACATTTTTCTCCGCTCAATGGTTGTATCTAACCATGTTCATCTTGTCAGCTACTGC
TGGAACGTGGAGCAAACTTAGAGTGCAAAGATGAAGAAGGGGCAATTCCTCTCCATGATGCTTGTGCTGGAGGTATGCAT
TCTTTTAATTGCAGTGAGCTG-TTTTTTTTCCTTTTTGCACTCAATGTGTTTAGTTTATTTACTGACACTCTTTGTACAG
GCTTCACTGAGATAGTTCGGTACATTCTCAGTTTTGCTGCAAATGCTGAGGGTTGTGCAACGCGAATGCTCAACACCGTT
GATGCTGAAGGCGATACTGTAAGCCCTCTTGACCACTCGATCATATGCCAGCCATGTTGATTTTGCAGCAAATGTGCCAT
CGGCGTGGTCTTATAACCTTATGTGTTTGCTCCGTGCAGCCACTCCACCATGCTGCCAGAGGGGAACACATGGACACCGT
CAAGCTTTTGCTCGAAGCTGGCGCATGCCCCAAGAAGGAGAATACCTACGGGCAGGCAGCCGCCGAGATGGCCGATCAAG
ATACCGAAGTCCGTGCCCTGTTAACCGCCAAGCAAGTCGAGGCCAGCATACATATGACGAACTGAGGATGGACCTGTCGG
AGG-AACCCTTGGTTGATATCAGTC--ATGATGAGTGGGCAGTTAAATGAGTGGTAGTATTAGACTATTAGTATCATCAT
ACACAGCTTGCCTACTATGAGAATTGCATTTCTGTTGTCACCAGAACTATGGAGTT-ATCTGCAGAGAGGACAT----GT
GTTTCTCCATTTGCCCTTTGTATCTGTATTTTTCGAGTTATATCAAAGGCACAATCAGTTGAACTC-TCATTACCTGCTT
TTCCAGCATGATTA---CTCTTACCCTTGCGAGAATTTTGAAAAAGGAAATGTTTCGTCCATGACAACCTGAGACTGAAT
TGCTTAAGTTACCCGTGGCGTGTTTGGTGGAGTCTATGAGAATTTTGAAGGAGGCTTGAATGTTCAATAGCTTGCATTCT
TATGTGTTTGGTGGCAAAAAAAATGAATTTCTGCAAAAAAAAAAATACTCCCTCCGTAAAGAAATATAAGACTCCCTTCG
TCTCATAATATAAGAATATTTTTCAAGCTAACATAGCTTGAAAAAACGTTCTTATATTTTGGGACGGAGGGAGTAGATGT
CAGAGAGGACATTGGAAAGAGCAGTAATGTTGTTTGCCTTGTTCTTTGATACTTGGTTCAATGTTTTCCATGTCTTGATA
TTATCTAAACTTTTGTGCAAATATTTACTTATGTTGAAATCTTGCTGGAACTCTGTATAAAATGCATTTTTTTTCCATTC
TTACTCCCTTTGTAAATTAATACATGACATTTTAGATCACTAAAGTAATGATCTAAATGTCTTAGGCCCTCATCAAAAGC
CATAAAAGCCCCAAAAGAATCTATTTAGGAGCTTTTATGTCTTTTTGGTCAAAATGAAAAGGCCGCAAAAGCAAAAGCAG
AAGCCCAAACAAACAGGGCCTTACAGAAAG---AGTACATGATTGTGGTGGCATTCTTGCAATATCAGGAATGAAGTAAC
CACACCAAACTCATATA---CATGCTATCAAACAAAATGTCAGCTTGGC------------------ATGGATGCTACCA
CGCCAAT------AGGTATGTACTCGGACATGTCTAGAGTCAGCATGTCTCGGTGGAGAACAAGGGTGAGAAGGCCACCA
AACACGCCCTCGCGTTCACTAGGCGTGGAGTCTATTGCTATCCCTTTACCATGGTATAAGAGGATGAAACCGTCATGTTT
GTCTTCTACTCTCTCCGTTCCTAAATACTTCTCTTTTTAGAGATATCAAATGAAGTACCACATACGAAAGTATATATACT
CATTTTGCTCCTATGTATTCACTTGTTGAAATCTTTAAAAAGACATATTTCGGAACGGAGGGAGCACAAAGATATGGTTA
TGTTTTTGATATGGTGTGATACATCTCTTTCTCAAAATTAAATACCAGAGAAACCTAATGCACATTAATTGTAAAAAA--
>chr4A_774
GGCGAGGAT-----------------------------------------------------------------------
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---------------------TGACCTAACAATCTATTTCCCGTATATATGATCGTTTTATTCCGTATGATCTGGAGCGT
TCGTTCCTGATCCGACGTCGCCAGAT-ATAGGGCAGGCGCCGCCTAGGTAGGTTTTTCGTCCCCGTGAGCTCTCGACACA
AGTCTCGCCCGCAGCCGCCGTCAGAGCGCAACGCACGCCCGCGAGCCCACCGAAGCCCAGGCGCGCGGAGACCCTAGCCA
AGCGAGTCCTCGCCGCAGATGGCAGTCCCCGGCGGCCGCAACGGCCTCGTCGAGGACGACGACGTCGCCGACCACGCCGG
CGCCTTCGTCGCCCCCTCCGACGACGAGGAGGCGCCGCTGCCTCCCCACCTCCAGGCCCTCTCCGACGCCGCCCAGAGCG
GCGACGTCGACGCCCTCCGCACCGCGCTCGGTACCGTCTTAATTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGTACTGTATCGATTAATTCACTAGCCAGACCGCCGCTTTTCATGACGCCCCCGTGAAAATTGCAGA
TGTTTCAGCATATAGTTTAGTGATACTGCCTGAACCTATGGCCTTGTCA-------GCGGATCAGGTTGTATTTTCTACC
TGGATCTTCCTGGTGCATGTCTTGTGTTGGATGATTGCGATGTATGGGTTGTGTTTGGGTCGCTTCTGCACACGCCCTCT
GTGTGCTTCCATCAGCTCAGTGACCCAGGAGCAAAGGCTTCACTTAGTCCAGTAGCACTAGGATGCATTTCTGCGTGTGG
GAGCACCACATATATGTATGATAAGTTATAAATATTGTTGCTGGAATCTAGGACATGTATGTTGTTGAAAGTGTGGCGAC
TTAACCTGGCAGTGGCATCTCTTATTATTGCAATCTGTTTAGAGCCATCGGTGTAATGCTGTATTTTTTATTTTATTTTT
GT-GGAGACAGGGGATGCTGTATTATGCCAAGGAAGCAACTAAATGTTAGTTGGAGAAAAAAAAACGTTTGTTAGTGTTT
AACGGAATGAAACAATTTGCTGTATGGCTCTTGAGATGATATTCCCTCTGTCCGGAAATACTTGTCGGAGAAATGGATGT
ATCTAGACGTATTTTAGTTCTAGGTACATCCATTTTTATCCATTTCTCTGACAAGTATTTGTCTGTCAGTTGGTTTT--C
TAAAAGTAGCAAAACACAAGCATTTTTTAAAAGCCATC---TTATGTC-AAACACAACTTAAATTTCCTTGCCTAACCCT
AGAAAATTTGAAGGACAACTCTAGTTTGGGAATCTTATCTTGTTTATTGAAACTGCTTGCTATGCTTCCTTGGCTGGCAT
GTCGGCTGTGTTTGGTTGATGCCCACACTAGCCTACCA--------------TTGGCTTGCCAATTCTTTGGCCAAGGAA
TTTCTCACCCTCATTTGGCCAACTATTTGGCAAAAATCTGTGAGAAGAATGGTGGACACCCATTGGCAGCCAAAATTTTG
GCAGGAAGCCAGACAATGACCAAGATTTGATAGGCACCCAATTTTTTGGCAGGGCTAGTATAGTATGGGCAGCAAACCAA
ACAGGCCTTCTTCCCCATGAAGTTAATCAACCTTCATCGGGTCTCATCTCACTCTTCAGAACACCCCCTTGTGGTGTTTT
TTATGGTTTCCTTGGAAA-TTTGTAAGGATATAATCTCCATTTTTTA--AATATATATTCGTAAAA--AAAGCACTTCTA
TGTTTTGTATTCTTG---TAGCATACATAAATTAATAGTTCTTAAACTGAAACATAAACAAGGGAAATGCTATTGCTGTG
GTATAGCTGGG------------ATGCACATCATTCATGGTTATTGTCGATGTTCTCTCTTCAAGTTTGTCTAAGTGATC
GTTATCAGATCTCACTCTTGCAGTGGTACAATCATATAATGATTAGTTGAGGTCTGTATGGTGATTGTCTAACCATCTGT
GTGTCG-GGGCCATATTGCTGCACTGGTTCAAAAGTCTTGTTGCT-----------------------------------
----------------------------------------------------AAAATTATTTTGTCTTCATACTTTACTT
TTCTTGGTCAGTATAACCTGTTTTTAATGCTGGTGTTTTTGGCAATTATTTGCAACAGAAAAAGCATGCCTGCATATGTG
TCTGACGTTGATGGAGCTCTTTATTTAGATTCTACTGTTATGTTTACGCAGATAACTATGGTGGCAGCATTGATGATCCA
GTTGAAGATGGTGATACTGTGCTTCACCTGGCATGCTTATATGGCCATCTACTTTGCGTGCAGGTTTACATTGCTATCTT
GCATAATTTTCTCCGCCTTCTTGGAAATTTTTCTCTGCTCAATGGTTGTATATAACCATGTTCATCTTGTCAGCTACTGC
TGGAACGTGGAGCAAGCTTAGAGTCCAAAGATGAAGAAGGGGCAATTCCTCTCCATGATGCTTGTGCTGGAGGTATGCAT
TCTTTTACTTGCAGTGGGC--TTATTTTTTCCTTTTTGCACTCAATGTGTTTAGTCTATTTACTGACACTCTTTGTACAG
GCTTCACCGAGATAGTTCAGTACATTCTCAGTTTTGCTGCAAATGCTGAGGGTTGTGCAACACGAATGCTCAACACCGTT
GATGCTGAAGGCGATACTGTAAGCCCTCTTGACCACTTGATCATATGCCAACCATGTTGCATTTACAGCTTTGTGCTATC
AGTGGTC----TATAACCTTATATGTTTGCTCCGTGCAGCCACTCCACCATGCTGCCAGAGGGGAACACATGGACACCGT
CAAGCTTCTGCTCGAGGCTGGCGCATGTCCCAAGAAGGAGAATGCCTACGGGCAGGCAGCCGCCGAGATGGCCGATCAAG
ATACCGAAGTCCGGGCCCTGTTAACTGCCAAGCAAGTCGAGGCCAGCGTACACATGGCAAAC---TGATGGACCTGTCGG
AGGGAACCCTTGGTTGAAATCGTTCAAATGATGAGTGGGTGGTAAAATGAGTGGTAGTATTAGACTATTAGTATCTCCAT
ACACAGCTTGCCTACTATGAGAACTGCGTTTCTGTTATCATGAGAACTATGGAGTTTATGTGCAGAGAGGAGGACATGGC
GCTTCTCCATTTGCCCTTTGTATCTGTATTTTTCGAGTTATATCAAAGGCTCAATTAGTTGAACTC-TATGC-CCTGCTT
TTCCAGCATGATGATTGCTCTTACCCTTGCGAGAACTTTGAAGAAGGAAATATTTCGTCCATGACAACCTGAGACTGAAT
TGCTTAAGTTACTTGGGGCGTGTTTGGTGGAGTCTATGGGAATTTTGAAGGAGGCTTGAATGTTCAATAGCTTGCATTCT
TGTGTGTTTGGTGGCAAAAC-AATGAATTTCTGCAACAACAAATTTTTTTTTTTTTACAATTCTTACTCAGTTTATATTG
TAGATCGTTGCAATTCTAAATGGCAGCGAGTAGAGCTCATCCGTTTGTGTCATTGATCTATGCAAATTCT----------
--------ACATTGTTAAGAGCAGTAATGTT-TTTGCCTTGTTCTTTGATACTTGGTTCAATGTTTTCCATGTCTAGCTA
TTGTCAAAAC-TTTGTGCAAATATTTACTTATGTTGAAATCTTGCTAGAACTGTGTATACAATCC-TTTTTTTTTCATTG
TTACTCCATCTGTAAATTAATATACGACATTTTAGATCACTAAAGTAATGATTCAAAACGTCTTTTATTAGTG-------
--------------------------------------------------------------------------------
---------------------TACAGAGGG---AGCAGATGATTGTGGTGGCATTCTGGCAATATCAGGAATGAGGTAAC
CACACTGAACTCATATAGTACATGCTATCAAACAGAAAAATCTCAGGTTAGCATGTCGTCTCATTAGATGGATGCTACTA
CATAAATACTGTAAGGTATGTACTCGGGCATGTCTAGAGCCAGCGTGTCTCGGTGGAGAACAAGGGTGAGAAGGCTACCA
AACACACCCTCGCGTTCACCAGGCGTGGAGTCTGTTGCTACGCTTTTACCATGGTA------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
--S----SSSSSSSSSSSSSSSSS---------------SS---S--------S-SS-----S-S----------S----
----S-SS-------------------S-----SS-SSSS---S------SS---------------------S--S--S
---S---S-S---S--SSS-----SS--------SS--S-SSS---SS-S------------------------------
-SS----S--SS-S--------S---S-----S-SS-S--S---S------SS--S------S-----------------
S--------SS----------SSS-------S-----SSSSSS---S---S-------S-S-------S----SS-----
-----------------------------------S-------------S-S------------S--------------S
--------S-----------S----SS-------S---------------SS---S---------SS---SS--------
-S---------------------------------------S-----S-------S---S-------S-SSSSS------
--------------S------------------------SS-----S------S-----------------SSS-S-SS-
SSSSSS-----S-S---S-------S-S---S-SS---SS--SSS-SS--SS-S-SSSSSSSS-SS-SSSSSSSSSSS-S
SS------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------S-------------------------S-------S-----------------------------
-----S---------------S----S--------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------S--------------S----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------SS---------------------------------------------S--------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
------------------------------S-------------------------------------------------
-----------------------------------------------------------------S--------------
-----------------------------S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------S-------------------------------
--------------------------------------------------------------------------------
----------------------S-----------------------------S---------------------------
--------------------------------------------------------S-----------------------
----------------------------------------S---------------------------------------
---------S----------------------------S-----------------------------------------
------------------S-------------------------------------------------------------
--------------------------S-----------------------------------------------------
---------------------------S------S-------------S-------------------------------
---------------------------------------S----------------------------------------
----------------------------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S--------------------------------
--------------------------------------------S-----------------------------------
------------------------S---------------------------------S---------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
--------S-----------------------------------------------------------------------
--------------S-----------------------------------------------------------------
----------------------------------------------------------------S-S-------------
------------------------S----S----S---------------------------------------------
---------------S------------------S--------------------------------S------------
------------------------------------------S----------S----------S---------------
-------SS---------S-------S--------------S---------S--S-------S-----------------
------------------------S-----------------------------------------------------SS
SSSSS-SS-S----------------------------------------------------------------------
--------------S-S-------S---S-----------------SSS-------------------------------
--------------------------------------------------------------------------------
-------------------------S----SSS--------S----------------S------------SS-------
S-----------S-------------------------S-------S---------------------------------
----------------------------------------------------S-------------S-------------
------------S------S-------------------------------------------------S---S--S---
---------SS---------------------------------------------------------------------
--------------------------------------------------------------------------------
-----S-----------------------------------------S------------------------------SS
>forward_551
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------TTGCGATCATGGCAGAGGTT---------
--------------------------------------------------------------------------------
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>reverse_3906
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-----------------------------------------------------------------AGAAAACGTGGCGAC
TTAACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_760
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--------------------GCATCGCTAGCAGATCCCAT----------------------------------------
--------------------------------------------------------------------------------
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>reverse_4679
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--------------------------------------AGGTCTCATCTTCAGAACACCC--------------------
--------------------------------------------------------------------------------
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>forward_772
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--------------------------------GATCCCATAAACCGGGCCAT----------------------------
--------------------------------------------------------------------------------
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>reverse_5128
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-------ACCTGCTTTAATGGTGGTGT-----------------------------------------------------
--------------------------------------------------------------------------------
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>forward_3791
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-----------TCAGCTCAGTGACCCAGGAA-------------------------------------------------
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>reverse_5405
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--------------------------------------------ACATCTACCTTGCGTGCAGG----------------
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>forward_4423
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---GGCTGTGTTTGGTTGATGCT---------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_5783
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----------------------ACCCTCTTGACCACTCGATC--------------------------------------
--------------------------------------------------------------------------------
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>forward_5075
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---------------TTGCTGCACTGGTTCAAAAC---------------------------------------------
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>reverse_7187
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------------------------------------------------------------------CGAGAAGGCCACCA
AACACA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
