>input_sequence_29798
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----------------------------------------ATGTCTCCGCTCGCCGACCTTCTCAGCCTCGACCTGTCCG
GCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAACATC---------CCTCTTCCTCCATCTTCCTCAGCACTGTC
CCAACCTCCCATCTCACCTTCCTTCCA-----------------------------------------------------
----------------------------------------AGTCAGGCAGGCCACATAT--TTTTT-TCCTCCCCACAAA
TCCCATCTCACGTTTCTTTCTAGTTTAGTTTACTA---------------------------------------------
----------------------------TACTAGTGCGTTTCTCAAATTTTGAGCCCAGTAAAAACCCTTCTCTTG----
-TTTTTAGGCCT------TGATCTGTTGCCAATATGTTTTTTTTTTCTCTT----------TTTTTCTTT--GTTTGGCT
ATGTGCATCTTGGCTATGCCTTGGCTAGGTGTTGCTGGTCATGATTTGTATCTGCATGATACTAGTACTTCCTCTGTA-A
AGAAATATAAGAGTGTTTTGGTCTAAATGATCTTTGATCTAAACGCTTTTATATTTTTGTAGGGGGGAGGGAGGGAGTAC
ATTATAAGTTAATAAATTGGGGAAATCGGCATCGTACTTTTATGCCTTATTACTAACCTACTTCCATATACA-----CCT
TGCCTAATCCAGGGTCGGCGGCACGGGCATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCACGACGACTCA
TTACTTTGCCGGCCGGCTCCTTTTTGTCTAAG-----CTGTGACGGCACTGCAAGCATGATATGTTCCTAACACTTCCTG
TGACCC-TTTTGATGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCGTTGATGACCCCAGCAAGCTCCCAAAATGG
AATTTCGACGGCTCCAGCACCGGCCAGGCCACGGGCGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACTCT
TCACATAACCATCATGCCTTGGCTTGCGTGCCTTGAGGCTGAGCTAATCTGAATTTCATGTCTTGCTCCTGCCAAGCCCT
CAAGCCATCTTCAGGGACCCATTCAGGAAGGGGAACAACATCCTGGTATATAAGAATGATCAAGAT----CCTCCTTGTT
TTTTCATTCATGGAT-------------------------------------------------------TTCGTGTTAT
TGTTTATTTGTGTTAATGAATTTTGAAAAGTTGTTCATGAGTGCTTTTTCACCTCTAGTATTTTTTTTTAACCTCGCGCG
TTTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCGGCGAGGATATTC
GGCCATCCCGAGGTCAAGGCTGAAGAACCATGGTCGGTAC---TCAGTTGCTCTGTTCTATAGAAATTAGTCCACTACTT
TAATTTTTGCACATAATTTAATTCATGTGGCAATTAATCTTGTGACACCCCCTTATGTTGCCTGAAATGTAAGGTATGGG
ATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCA
GGTAACTTAACTAGACATGCTGCATATTGCAGCACTCTTATTAAGAGCAAGTCTTAGCCAAGATCACTCCACTAAGTAAG
GGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTTGCTGACAACAGTTCAGAAATGTTGGACCGATAGTGACAC
TGGCAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGACATCGTCG
ATGCACACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAG------
--------------------------------------------------------------------------------
---TGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGT
AAATG-AA--ACCGCCTCATCTGGTTGAATGAATG-AATAAAATGCAACTTGTGCTGATAAGAAA--TTTTTCCTTTGTG
TAACCCAATAGAGGATCACTGAGATTGCTGGCGTCGTCGTCTCCTTCGACCCCAAGCCGATCCCGGTGAGCAT---TTCT
TCTTCTTCTTCTTGTGCCACAAGTGTCACCTTGATCTGCCGTTCCACTGGCCAGCCAGCCATATGTAACTTTGCATATGT
GTGTGACTGTAGGGAGAATGGAATGGTGCTGGTGCCCACACAAACTACAGGTAAGATAAAGAGAGCAAGCCAAGGGATGC
ATCGCCGTCTGCTATACTCTAGTCTTGTGTTATGGGTTATGACATGATCCTGCTGATG---TCTGAATGCAGCACCAAGT
CGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAAGGCGATCAAGAAGCTCGAGGCGCGGCACATGGAGCACATCGCC
GCCTACGGTGAGGGCAACGAGCGCCGGCTCACCGGCCGCCATGAGACCGCCGACATCAACACCTTCGTATGGGTAAGTAG
GAAAGCCCCACGGGGAG---------TTCAGAGTT----CAGAGTCACCACCATTGCTGCTCTTCTCTGACTGCTTTCCG
GCTGCATTGTTTGTTTGTTTTTTGCAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGAGAAGGA
AGGCAAGGGCTACTTCGAGGACCGGAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCCTGATCGCCGAGACCA
CCATCCTCTGCAAGGCCGGCCTCTCCAATGGCAAGTAG------------------------------------------
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-------------------------------------------------
>chr4B_1_TraesCS4B01G047400
TTAATTATGTTTAAGTGGACTTTGGCCGGCGACCGGCCACTTATGTTTTATTATGTTTATTTTAAGTTTATTTCGTGCAA
GCATATTTTTTTGCATGCCATGCCGGCACATTTGGGTCTGCCTCCCCGTTGGATGGTCAAGCCGACCCATTTTACAATAC
GGACGCGCACGTCCGCCTGACAAAAACGGACAAAACGCGTGCTGGTTTGGGTCGCCCCGTTGGAGTTGCTCTAACGATGT
CACGAGGGGGATGACACGACAGGCACAACAACTTAGCTGCTCACACATGTCC----------CGAAGTCATGGTTAAATT
TGCTACTGCGATGGTCACGGAGTAG--CAGTGGTCGCTTTCCTACATAGAGTATCTTGCAGGTGTGGCTCACGTCTCACT
CATGTCACCGTCTAGCTTTGACCCATCGGGTCA---------GTCAGTCAGTCCACAGGGATCCGCAC-----GGACGCC
GGGACAAGAGAACGTGAATTTGCCCTTCACCACTGGAGTAGTAGCACTGGCTAGCCAGCTGCTTCATGCATAAGCAAAGG
GGAAGTCAGCCATAGCCATAGCCAATTTCTCCTTCCCCGACCGAGTGAATGGCACTTTCAGCAGGGCTTTCTTAATTTTA
ATTAATGAAGTGCTCCTGATGTGGTGTGCGGATCAGCGAAGCGCGG-----TTGTCCGTACGCATGGCGTCCCGTGTACT
G-------------------------GTACAGTAGAAAAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAA
GGACAGCCGTACGTACCATCG-----------GTTTCCGTTTCCCCCCGCCCGCAACGCCCACCAACCTTTCAGGGCCTC
CTCCCCCGTCGCCACGCTACTTATAGAGGGGCAGAGCCAGCTACGGCGGCACCACTCGGCTCGCTCCCCTGTCCCGCATT
TCCCAGAGAGCTACCATTTGCCACTACAACACCTCTCCCTCT----------CCCTCTCCCTCTCCATCTCCGGTAGGCT
---CCGGGGGAAGAAGAAGAACAGCACGCCGGCATCCGCCATGTCTCCGCTCGCCGACCTTCTCAGCCTCGACCTGTCCG
GCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAACATC---------CCTCTTCCTCCATCTTCCTCAGCACTGTC
CCAACCTCCCATCTCACCTTCCTTCCA-----------------------------------------------------
----------------------------------------AGTCAGGCAGGCCACATAT--TTTTT-TCCTCCCCACAAA
TCCCATCTCACGTTTCTTTCTAGTTTAGTTTACTA---------------------------------------------
----------------------------TACTAGTGCGTTTCTCAAATTTTGAGCCCAGTAAAAACCCTTCTCTTG----
-TTTTTAGGCCT------TGATCTGTTGCCAATATGTTTTTTTTTTCTCTT----------TTTTTCTTT--GTTTGGCT
ATGTGCATCTTGGCTATGCCTTGGCTAGGTGTTGCTGGTCATGATTTGTATCTGCATGATACTAGTACTTCCTCTGTA-A
AGAAATATAAGAGTGTTTTGGTCTAAATGATCTTTGATCTAAACGCTTTTATATTTTTGTAGGGGGGAGGGAGGGAGTAC
ATTATAAGTTAATAAATTGGGGAAATCGGCATCGTACTTTTATGCCTTATTACTAACCTACTTCCATATACA-----CCT
TGCCTAATCCAGGGTCGGCGGCACGGGCATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCACGACGACTCA
TTACTTTGCCGGCCGGCTCCTTTTTGTCTAAG-----CTGTGACGGCACTGCAAGCATGATATGTTCCTAACACTTCCTG
TGACCC-TTTTGATGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCGTTGATGACCCCAGCAAGCTCCCAAAATGG
AATTTCGACGGCTCCAGCACCGGCCAGGCCACGGGCGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACTCT
TCACATAACCATCATGCCTTGGCTTGCGTGCCTTGAGGCTGAGCTAATCTGAATTTCATGTCTTGCTCCTGCCAAGCCCT
CAAGCCATCTTCAGGGACCCATTCAGGAAGGGGAACAACATCCTGGTATATAAGAATGATCAAGAT----CCTCCTTGTT
TTTTCATTCATGGAT-------------------------------------------------------TTCGTGTTAT
TGTTTATTTGTGTTAATGAATTTTGAAAAGTTGTTCATGAGTGCTTTTTCACCTCTAGTATTTTTTTTTAACCTCGCGCG
TTTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCGGCGAGGATATTC
GGCCATCCCGAGGTCAAGGCTGAAGAACCATGGTCGGTAC---TCAGTTGCTCTGTTCTATAGAAATTAGTCCACTACTT
TAATTTTTGCACATAATTTAATTCATGTGGCAATTAATCTTGTGACACCCCCTTATGTTGCCTGAAATGTAAGGTATGGG
ATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCA
GGTAACTTAACTAGACATGCTGCATATTGCAGCACTCTTATTAAGAGCAAGTCTTAGCCAAGATCACTCCACTAAGTAAG
GGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTTGCTGACAACAGTTCAGAAATGTTGGACCGATAGTGACAC
TGGCAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGACATCGTCG
ATGCACACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAG------
--------------------------------------------------------------------------------
---TGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGT
AAATG-AA--ACCGCCTCATCTGGTTGAATGAATG-AATAAAATGCAACTTGTGCTGATAAGAAA--TTTTTCCTTTGTG
TAACCCAATAGAGGATCACTGAGATTGCTGGCGTCGTCGTCTCCTTCGACCCCAAGCCGATCCCGGTGAGCAT---TTCT
TCTTCTTCTTCTTGTGCCACAAGTGTCACCTTGATCTGCCGTTCCACTGGCCAGCCAGCCATATGTAACTTTGCATATGT
GTGTGACTGTAGGGAGAATGGAATGGTGCTGGTGCCCACACAAACTACAGGTAAGATAAAGAGAGCAAGCCAAGGGATGC
ATCGCCGTCTGCTATACTCTAGTCTTGTGTTATGGGTTATGACATGATCCTGCTGATG---TCTGAATGCAGCACCAAGT
CGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAAGGCGATCAAGAAGCTCGAGGCGCGGCACATGGAGCACATCGCC
GCCTACGGTGAGGGCAACGAGCGCCGGCTCACCGGCCGCCATGAGACCGCCGACATCAACACCTTCGTATGGGTAAGTAG
GAAAGCCCCACGGGGAG---------TTCAGAGTT----CAGAGTCACCACCATTGCTGCTCTTCTCTGACTGCTTTCCG
GCTGCATTGTTTGTTTGTTTTTTGCAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGAGAAGGA
AGGCAAGGGCTACTTCGAGGACCGGAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCCTGATCGCCGAGACCA
CCATCCTCTGCAAGGCCGGCCTCTCCAATGGCAAGTAGATGTCATCTTTGATGGGTTCTGTCTTCTGTGTGAGTGCCCGT
GGTTG----TGTGTGTGTGTGTGTGTGTGTGTG----------TGCAGTGATG----------AGACTGGCAGGGTTTGA
ATAATGATGATAAAGCAATAACATGTAATGTAATG--------TGCTTGT-GTGGCTGGATGTATGTTCCTCGTCCTGAA
CTTGCCTGTGGCCTGCAAACATCTCGTGTTAAGCGTTCATGGCACCCAAGTTCATGGCACTTATTTGTGG----------
---------------------TCTGCATCAATCGTTGCAATGCATAGGGTAAT-CAACAACAACAACAAAAAACTCAAAA
------TCG------------TTTCAATCTCACATTGGTAAGAAAAAGTTGTAGACAGAGAAGAAAACATCAAGGGCTCA
TTTGGCTTACTCCAAATTTTCGATAGAATAGCCCATTCCATA--------GGGAA-TTCAAAGGAAAGTAAGACGGTGAT
TCCGTTCTTCCTAACGGTACCAAAG-------------------------------------------------------
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----------------------GAATATTTCCTATGCGAACAATATCCTTCAGAAATTCCTA---------TGTTTTCCT
TTGGATGTTCAAGATAAGATTGGTACACGAGTACTCAACGAAAAAAGTAACACGTCAATATATTGCATTGCACGAAGAA-
-ACACTCTTGATTACAATCACTGGGACAAGATCACGGCCATATA--------CTGTACCGGCAGCAGAGTA---AGTACA
GGCAACGAAACGGAGACGGTCTGGCACATACATTTATTCAGGTGTGAAGGGAGATGT--AAGAAAAGGCTATCGAACATG
AGGCCAGAAATGAACTTCATACGCGGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATCACGGTGGGGGCGGATCGGC
CGGTGTACTCCTTGATCTTTGAAAACTTCAGGGCCACATCAACCTGGATAAAAAGAAGTG-TCAGATCTGCATCCTCGCC
AAAATGTTTTGGTTATTTGTTAGAAGCATGA-----------------GGAGTTGGATCTTACCAGCGGGGAAAGAGCAT
CACTCGACGCCCTCCCGGTTTTGGAAGAATCCTTCTCATACTGCTCAAT
>chr4D_232
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------TAACGATGG
CACGAGAGGAATGACACGACAGGCACAAAAGTATAGCTACTCATGTCCGAAACCATATGCCTCGAAGTCATGGTCAGGTT
TGCTACTGCGATGGTCACTGAGTAGCACAGTAGTCACTTTCCTACACA-----TCCTGCAGGTGCCACTCACGTCTCACT
CACGACACCATCTAACTTTGACCGATCGGGAAGATCCGTCAGGTCAGTCAGTCCACTGGGATTCGCACGGATCGGACGCC
GGGACAAGAGAACGTGAATTTGCCCTTCACCACTT---------------------------TTCATGCATAAGCAAAGG
ACCCG-------TAGCCATAGCCAATTTCTCCTTCCCCGACCGAGCGAATGACACTTTTTAATTAAGTAAACTCGCACAA
CAGAAGAGCTGGTG------GTGGTGTGCGGATCAGCGAAGCGCGG-----TTGTCCGTACGCATGG-------------
------------------CGTCCCGTGTACAGTAGAAAAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAA
GGACAGCCGTACGTACCAGCCGCCCCGGATCCGTTTCCGTTTCCCCCCGCCCGCAAAGCCCACCAACCTTTCGGGGCCTC
CTCCCC-GTCGCCACGCTACTTATAGAGGGGCAGAGCCAGCTACGGCGACACACTCGACCCGACTCCTCTGCCCCGCATT
TCCAAGA---------------------ACACCTCTCCCTTCCCTTGCTCTGCCCTCTCCATCTCCATCTCCGGCTCCGG
------------GAAGAAGAAGAAGAGGTA-------GCCATGTCTCCGCTCGCCGACCTTCTCAGCCTCGACCTGTCCG
GCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAAGACCGCTCTGCTTCCTCATCCTCCCTCTTCCTCAGCACTGTC
CCAAC-TCCCATCTCACCTTCCTTCCGAACAAAATAATCCACTTCATCCATTCTTGCTGGTTCTTGTAATCTCAATTTTT
AGTCCAGTAAAAACCCTTCTCTTCTTGTTTTTTCCAAGTCAGGCAGGCAGGCCACAGATATTTTTTTTCCTCCCCATAAA
TCCCATCTGACGTTCCTTTCTAGTTTAGTTTACTGGAATATATCATCGAAAAAAAAAAGTTTACATGAATATATACTAGT
GTGTTTCTCTTCTTTTTTTTGCGAAACGTACTAGTGCGTTTCTCAAATTT-GAGTCCAGTAAAAAACCCTTTTCTTCTTG
TTTTTTACGCCT------TGATCTGTTGCCAATATGATGTTTTTTTTATTTTTTATTTTTTCTTTGGCAGACCGTTGACC
CTGTGCATCTTAGCTATGCGTTG--------CCGCTCATCATGATTTGTATTCGCCTCATTCT-----------------
---------------------------------------------------------------------------AGTAC
ATTATAAGTCAACAAAATGGGAAAATCGGCATCGTACTTTTAGGCCTTATTACTAACCTACTTCCATATAAAT-----CT
TGCCTAATCCAGGGTCGGCGGCACAGGGATGGACGTCAGGAGCAAAGCCAGGGTAAGCCTGCCTAACCCTCAATGACTCG
TAGCTTTGCCGGCCGACTCCGTTTTGTCTAGCTGTGACTGTGACGGCACTGCAAGTATGATATGTTCCTAACACTTCTTG
TGACCCTTTTTGACGCCTTGGATATTCACAATCAGACGCTGCCCGGGCCCGTGGAGGACCCCAGCAAGCTTCCAAAATGG
AATTTTGACGGCTCCAGCACCGGCCAAGCCACGGGTGACGACAGCGAAGTCATCCTCTGGTAAGCCCTTGACTGCACCCT
TCAGTTAAC---CATGCCTTGGCTTGCGTGCCATGAGGCTGAGCTAATCTGAATTTCATGTGTTGCTCCTGCCAAGCCCT
CAAGCCATCTTCAAGGACCCATTCAGGAGGGGGAACAACATCCTGGTA----AGATCAAAGATCCT----CCTCTTTCTT
TTTTCATGAATACCAGATTGTTGTTCCACCTACAGTAATTTTTGTATTGTTGTGGCATCTGGCATGGATCTTTGTATTGT
TGTTTATTTGTGTAAATGATTTCTCAAAT-TTGTTCATGAATACCAGATTTTTTTAACATGA---TTTTTAACCT---TG
TGTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCGGCGAGGATATTC
GGCCATCCTGATGTCAAGGCTGAAGAACCATGGTCAGTATATATCAGCTGCTCTCTCCTATAGAAATTAGTCGACTACTT
TGATTTTTGCACATAATTTAATTTAGGTGGCAATTAATCTTGTGCGCCCCTCTTGTGTTGCCTGAAATGTAAGGTATGGG
ATTGAGCAAGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGTCCTCA
GGTAACTTAACTAGACATGTTGCATATTGCAGCACTCTTATT------AAGTCTTAGCCAAGATCACTCCACTAAGTAAG
GGAGGAAACTTGGCTGTAAATGATGT--TAGCTTAGCACTAACTGATAACAGTTCAAAAATGCTGGGCTGATGGTGACAC
TGACAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGACATCGTCG
ACGCGCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAGGTAGTT
TCAGGCGCAGAAATACCTTCCCCTT-----------TTCCTATCAAAATTGTTCATGGCCTGATTTCTGTCTGA----AC
CAGTGGGAGTTCCAAGTCGGCCCTTCCGTCGGCATCTCGGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGT
AAATATAA--ACTGCCTCACCTAGCTGAATGAATCAAATCAAATGCAGCTTTTGCTGATAAGAACATTTTTTGCTTTGTG
TAACCCAACAGAGGATCACTGAGATTGCCGGTGTCGTCGTCTCCTTCGACCCCAAACCGATCCCGGTGAGCAT------T
TCTTCTTCTTTTTGTGCCA-GAAGTGTACCTTGATCTGC------ACTGACCAGCTAGTCATTTCT-------TACATGT
GTGTGATTGCAGGGAGAGTGGAATGGTGCTGGTGCCCACACAAACTACAGGTAAGATATAACGAGCAAGCGAACGAATGC
ATCGCCGTCTAG-----TCTAGTCTTGTGTTATGAGTTATGACATGTTCCTGCTGTGGTTTTCTGGATGCAGCACCAAGT
CGATGAGGAGCGAGGGTGGGTACGAGGTGATCAAGAAGGCGATCCAGAAGCTGGAGGCGCGGCACATGGAGCACATCGCC
GCCTACGGGGAGGGCAACGAGCGCCGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTATGGGTAAGCAA
GACTGAAGGCCTAGAAGCCCAACAGCTTCAGACTC----CAGAGTCACTCACGCACTGACTGA-----------------
-CTGCCTTGTTTGTTTTC------CAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGAGAAGGA
AGGCAAGGGCTACTTCGAGGACCGGAGGCCGGCATCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGAGACCA
CCATCCTCAGCAAGGCCGGTCTCTCCAATGGCAAGTAGAGTGG--CTTTGATGGGTTCTGTTATCTGTGTGAGTGCCCGT
GGTTGCGCATGTGTGTGTGTGTGTGTGTCTGTG----------TGATCTGCATTGCAGTGACAAGACTGGCAGGGTTTGA
ATAATGATGATAAAGCAATAAC-----ATGTAATG--------TGCTTGTCCTAGCTGGATGTATGTTCCTCGTCCTGAA
CTTGTTTGTGGTCTGCAAACATCTCGTGTTATATAAGCGTGGGTTAT--GTTCATGGCACTAGGTTTGGCCGGGAAAGAG
TCTCATCAATCACCCCCTACCTCTGCGTCAATCGTTGC----CATAGGGTAATTCAACAAAAAAGAAAAGAAACTCAAAA
CTGTTGTCG------------TTGCAATGTCGCATTGCGAAGGATAAACTGAAGAAATCA--------------------
TTTGGTTTACTCCTAAATTTCGATGGAGTAGCCCATTCCATA--------GGGAATTTTGAAGGAAAGGAAGATAGTGAT
GTAAAATGTACTGCAGCTCTCGGGTACCACACTCTCCTATATGAAAATAGCATTAAAAAGCATATCAGCAACTTTCAAAA
AAATCTGAAATTCTGAGATATGAAACCTAAGTGCAGGTTGTACACCCGTGTTCATATTCACGGGGAATGGTTGCTTGTGA
TATCTGCGGCGCACGAACTACGGTCCAACATATGTTACATTCAGGGTTTTTTCTATACATGCAATTTCTTTGTCTTTTTT
ACTAGCATTACCACGGGCATCCATTTCCCACGAAACTGAACACACGAGTACAACAATCAACCAAGTTTCATATCTCAAAA
TTTCAGAAATTTAATATGTTTTTTAATGCTATTTTCATATAGGGTGTGTGACACGCAAGAGGATTTTTTATGTTATTTTC
ATATAGGGATATGTGACACCGAGAGGATTCTTAATGCTATTTTCATATAGGGGTGTGTGACACCCAAGAGCCACAAATCC
TCATCCAGATAGTGATTCCGTTGAATGTTTCCTATACGAATGATATCCTTCAGAAATTCCTATGTTT-TCCTGTTTTCCT
TTGAATGTTCAAGATAAGATTGGTACGAGTCCTCGAT--GAAAAAAGAAACACGTCAATATATTGCATTGCACGAAGAAA
CGCACTCTTGATTACAATCACTGGGACAAGATCAAGGCCATATA--------CTGTACCGGCAGCAGAGTA---AGTATA
GGCAAAGAAACGGAGACGGTCTGGCACATACATTTATTCAGGTGTAAATGGAGATGT--AAAAAAAGGCTATCGAACATG
AGGCCTGAACTGAACTTCATGCGCGGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATAACCGTGGGGGCGGATCGGC
CGGTGTACTCCTTGATCTTTGAAAACTTCAGGGCCACATCAACCTGGATAAAAAGAAGTG-TCAGATCTGCATCCTCACC
AAAATGTTTCGGTTATTTGTTAGAAGCATGA-----------------GGAGTTGGATCTTACCAGTGGAGAAAGAGCAT
CGCTTGACGCCCTCCCGGTTTTGGAAGAATCCTTCTCATACTGCTCAAT
>chr4A_308
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------ATT
TGCTACTAGCGTGTTCAGGAAGTTGCACGGTGGTCGCTTTCCTACATA-----TCTTGCCGGTGTCACTCACGTCTCACT
CATGTCACCATCTAACTTTGACCCCTCGGGAAGATCCGTCGGGTCAGTCAGTCCACTGGGATCTGCACTGCACGGACGCT
GGGACAAGAGAACGTGAATTTGCCCTTCACCACC----------------------------------------------
--------------------------------------------------------------------------------
----------------------GGTGTGCGGATCAGCGAAGCGCGGCGCGCTTGTCCGTACGCATGGGATCGAATCGGAT
CACAGCGAAGCGCGCCGGCGTCCCGTGCACAGTGGAAAAGGGGTGCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAA
GGACAGCCGTACGTACCAG---------------------------CCGCCCGCAACGCCCACCAACCTTTCGGGGGCAG
GGGCTC-GTCGCCACGCTACTTATAGAGGGGCAG-------------GGCACCACTCGGCTCGCTCCTCTGTCCCGCATT
CCCAACA---------------------ACACCTCTCCCTCCGCTTGCTCTGCCCTCTCCATCACCGCCTCCATCTCCGG
CGACCGGGGGAAGAAGAAGAAGAAGTAGCA-------GCCATGTCTCCGCTCGCTGAGCTTCTCAGCCTCGACCTGTCCG
GCTGCACCGGCAAGATCATCGCCGAGTACATATGGTAACATCGCTCTG----------CTCCCTCTTCCTCAGCACTGTC
CCAACCTCCCATCTCATCTTCCTTCCA-----------------------------------------------------
----------------------------------------AGTTAGGCAGGCCACAGAT--TTTTTGTCCTCCCCACAAA
TCCCATCTGACGTTTCTTT-------AGTTTAGTT---------------------------------------------
----------------------------TACTAGTGGGTTTCTCAAATTT-GAGCCCGGTAAAAACCCTTCTCGTC----
-TTGTTTTTACTCCTTGATGATCTGTTGCCAATATGGTGTTTTTCTTTTTT----------CTTTGTTAGACGTTTGGCT
CTATGCATCTTAGCTATGCGTTGGCCGGGTGCCGCTCATCATGATATATACCTGCATGATGCTGGTACTTTCTCTGTAAA
AAAAATATAAG-------------------------------ACGCTCTTATATTTCTCTATGAAT-------GGAGTAC
ATCATAAGTTAATAAAATGGGAAAATCGGCATCGTACTTTTAGGCCTTAATACTGGTCTACTTCTATTTACACCTTGCCT
TGCCTAATTCAGGGTCGGCGGCACCGGGATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCTCGACGACTCA
TAACTTTGCCGGCCGGCTCCTTTTTGTCC-AG-----CTGTGACGGCACTGCAAATATGTTCCTAAT-TAACACTTCTTG
TGACCC-TTTTGATGCCTTGGATATTCACAATCAGACGCTGCCCGGACCCGTCGATGACCCCAGCAAGCTTCCAAAATGG
AATTTTGACGGCTCCAGCACCGGCCAAGCCACGGGTGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACCCT
TCAGTTAACCC---TGCCTTGGCTTGCGTGCCTTGAGGCTGAGCTGATCTGAATTTCATGTGTTGCTTCTCCCAAGCCCT
CAGGCCATCTTCAGGGACCCGTTCAGGAAGGGGAACAACATCCTGGTA----AGAATGATCAAGATCTTCCCTTTTTTTT
TACTCATGGGTTTCGTATCGTTGTT------------------------------------------------------T
TGTTTATTTGTGTGAATGAATTTTGAAAA-TTGTTCATGAATGCTTTTTCACCTGTGGTAAATTGTTTTTAACCT---CG
TTTAGGTCATCTGTGACTGCTATGCGCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCAGCGAGGATATTC
GGCCACCCTGATGTCAAGGATGAAGAACCATGGTCAG----TATCAGTTGCTCTGTTCTTTAGAAATTAGTCGACTGA-T
TAATTTTTGCACATAATTTTATTTATGTGGCAATTAATCTTGTGACACCCTCTTATGTTGCCTGAAATGTAAGGTATGGG
ATTGAGCAGGAGTACACCCTTCTTCAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCA
GGTAACTTAACTAGACATGTTCCATACTGCAGCACTCTTATT------AAGTCTTAACCAAGATCGCTCCCCTAAACAAG
GGAGGAAACTTGGCTGTAAATGCTATTATAGCTTAGCACTTGCTGATAACAGTTCAAAAATGTTGGACCGATAGTGACAC
TGACAGAGCAAAATGTGTGTGACAGGGACCTTACTACTGCGCCGTGGGTGCAGAGAAATCTTACGGGCGCGACATCGTCG
ACGCGCACTACAAGGCCTGCCTCTACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAGGTAGTT
TCAGGCGCAGGAATACCTTCACTTGGATGCCCCTTATTCCTATCAAAATTGTTCATGGACTGATTTCTCTCTGAACCAAC
CAGTGGGAGTTCCAAGTTGGCCCTTCCGTCGGCATCTCTGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGT
AAATAAAACTACTGCCTCATCTAGTGAAATGAATCAAAT-----GCAACATTTTGTAATAAGAACAA-TTTTGTTTTGTG
TAACCCAACAGAGGATCACTGAGATTGCTGGCGTCGTCGTCTCCTTCGACCCCAAACCGATCCCGGTGAGCATTTCTTCT
TCTTCTTCTTCTTGTGCCA-AAATTTCAGCTCGATCTGCCGTTTCACTGGCCAGC-AGCGATATGTAACTGTGTATATGT
GTGTGACTGTAGGGAGAGTGGAATGGTGCTGGTGCCCACACAAACTACAGGTAAGATACAGAGAGGAAGCCAAGGGATGC
ATCTCCGTCTGC-----TCTAGTCTTGTGTCATGGGTTATGACATGATCCTGCCGATG---TCTGAATGCAGCACCAAGT
CGATGAGGAGCGAGGGCGGGTACGAGGTGATCAAGAAGGCGATCCAGAAGCTGGAGGCGCGGCACATGGACCACATCGCC
GCCTACGGCGAGGGCAACGAACGCCGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTCTGGGTAAGCAC
GAAAGCCCCACGGGGAG---------TCCAGACTTCAGACAGAGTCACCACCATTGCTGCTCTTCTCTTACTGCTTTCCG
GCTGCATTGTTTGTTTGTTTTT-GCAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGACAAGGA
AGGCAAGGGGTACTTCGAGGACCGGAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGACACCA
CCATCCTCTGGAACGCCGGCCTCTCCAATGGCAGGTAGATGTCATCTTTGATGGGCTCTGTCTTCTGTGTGAGTGCCCGT
GGTTG----TGTGTGTGTGTGCGCGCGCGCGTGTGAACTGCATTGCAGTGATG----------AGACCGGCAGGGTTTGA
ATAATAATGATAAAACAAATAACATCCGATGTGATGTGGTGTATGCTTGTCGTAGCTGGATGTATGTAACTCGTCCTGAA
CTTGTGTGTGGTTTGCAAATATCTCGTGCTGAGCGTCCATGGGACCTAGGCT--TGCCACTTGTTTGTTG----------
---------------------TCTGCATCAATCGTTGC----CATAGGGTAAT-CAACAACAAAGAAACAGACCATTGTA
GACACAAAAGCTCAAAAAACATTTCAATGTCACATCGGGAAGGAAAAATTGTAGACAGAGA-GAAAATCTCAAGGGTTCG
TTTGGTTTCCTCCTAAATTCCCGTGGAGTAGCAAATTCCGTTGTTCCTCGGGGAATTTCAGAGAGAAGTAAGATGGTGAT
TCCGTTGTTCCAAACGGTGCCTAAG-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GAATATTTCCTATACAAATGATATCCGTCAGAAATTCCTATGTTTTTCCAGTTTTCCT
TTGGATGTTCAAGAAAAGATTGGTACGCGAATCCTCGACG-AAAAAGAAACACGTCAATATATTGCAT-----GAAGAAA
CACACTCTTGATTACAATCACTGCGACAAGATTACTGCCATACACTGTACGTCTGTACCAGCAGCAGAGTATGCAGTATA
GGCAACGAAACAAGGACGGTCTGGCACATACATTTATTCAGGTGC-AAGGGAGATGTAAAAAAAAAAGCTATCGAACAGG
AGGCCAGAACTGAACTTCATACGCGGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATCACCGTGGGGGCAGATCGGC
CGGTGTACTCCTGGATCTTCGAAAGCTTCAGGGCCACGTCAACCTGGATAAAAGAATAGAATCAGAACTGCATCCTCGCC
AAAATGTTTCAGTGATTGTTACAGGCATGAGAGGGTATACAGTACAGGGGAGTTGGATCTTACCAGTGGAGAAAGAGCAT
CGCTCGACTCCCTCCCGGTTTTGGAAGAATCCTTCTCATACTGCTCAAT
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S
------S--S------------------S-SSS-----S----SSSSS-SSS----------------------S-S---
------------------------------------------------SSSSS------------SS-------------
---------S----S---------------SSS-----------------------S-----------------------
----------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
SSSS-SSSSSSS---------------------------------S-----S------SSSSSSSSS-SSSS-SSSSSS-
SSS--SSSSSS-SSSSSSSS-----------------------------------------------SS--SSS-SSSS-
S-------------------------------------------------------------------------------
------------------S-S---------------------------------------------------S-------
------S------------------------------------------------------------S------------
---S---SSSSSSSSSSSSSSSSSSSSS-------------S------------------S-------------SSSSSS
---------------------S-SS-S--SSSSSSSS-------------------------------------------
-------------------------------------------------------S------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------S-----------------------
--------S-------------------------S---------------------------------------------
--------------------------------------------------S----------------------S-S----
-------S----------------------------S-S-------S-S------------S---SS-SS----------
S----------S-------S-----SS----SS---SS----------------------S--S------S---------
-S---------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----S--------S-S--S-SSSSSSSSSS-------
----------------S----S--------------------S-------------------------------------
------------------------S--S-----------------------------------------S----------
-S-----------------------------------------------------S---------------------S--
----------------------------------------------------S-----------------S---------
-----S--------------------S--------S-----------------------------------------S--
---SS-----SS-------------------------------------------------S------------------
------------------------------------------------SSSS----------------------S--S--
-------SS--SSSS---------------------------------------------------------S--S--S-
-------------S---------------S----------S-------------S-----SS--S----S-S-SSSSS--
--------------------------------------------------------------------------------
--------S--S-----------------------S---S--------------------------------S-------
-----------------------S--------------------------S-----------------------------
--------------------------------------------------------------------------------
-------------------S----------------------SSSSSS--------------------------------
----------------------------------------------S---------S-----------------------
--S-----------------------------------------------------------------------------
-S--S---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S-------S---------S-----------S----S-----------S------------S-------S-------
--------S----------------------------------------------S------------------------
-------------------S--S-S------------------S-----------S--------------S--S------
-----------------S----------------------------------------S---------------------
------------SSSSS---------------------------------------------------------------
--------------------------------------------S-------S---------------------------
--------S--------------------------------S-----------------------------------S-S
--------------------------------S-----------------------------------S-----------
----------------------S---------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------SSSSS--------------------------S--------------------------
----SS-----S------------------------S-----S---S-S-------------S-----------------
--------------------------------------SSSS---------------------SS-S-------------
----------------------------S---------S---S----S-------------S-----SS-------S--S
-----S-------S--S-------S--S---------------------------------------------S------
------S-----------S--S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S----SS--------------------------------------
--------------------------S---S-S---S----------S--------------------------------
------------------------------------------------------------------------------S-
---------------------------------------------S---------------S------------------
---------S-----------------------------------------------------S----------------
--------------------------------------------------------------------------------
---------S--------------------------------------------------------S--S----------
-S-----------------------------------------------
>forward_272
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------------GACACGACAGGCACAACAAC------------------------------------------------
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>reverse_1744
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---------------------------------------------------------------GGGGAGGGAGGGAGTAC
ATT-----------------------------------------------------------------------------
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-------------------------------------------------
>forward_631
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---------------------------------------------------GCACTTTCAGCAGGGCTTTC---------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_2476
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------GCGCG
TTTAGGTCATCTGTG-----------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_2158
--------------------------------------------------------------------------------
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----------------------------------------------------------GGTAAGCCCTTGACTGCACT--
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-------------------------------------------------
>reverse_3463
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----------------------GTGTCACCTTGATCTGCCGT--------------------------------------
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>forward_2596
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----------------AGGCTGAAGAACCATGGTCG--------------------------------------------
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>reverse_4326
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-----CTGTGGCCTGCAAACATCTC-------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------
