>input_sequence_29746
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ATGAATGTGCACCTCAGCTTTGAGGATGGCTGGAAGGTCCTGGAGCAGGGCATTGTGACATGTTCAAAGATTTTGGAGGG
ATCCACTGGTACAAGGCCTACTGTTGCTGAGTACATGAATTGCTATGAGTATGATTCTATCATTATCACGTGTAATATGT
ATATCTTAACTAT-------------------------------------------------------------------
---------------------------------------------------------TACCAGTGAAGCACTTAAATTTG
TTGCACATGATATGTCCATATACTTTTCCAGCTGTGCTTATAGAATGGCGGTGCAGACAACCAGCTATTGTGAAGAGATG
TACAATGGTTACAAGGCTACACTTGCAGAATCTGTTCGTGCACTGGTACTATGTCGGCCTTTCATTCCATTTCACAGTTT
TCTATTGCCGAGTCAGTATTTGTAGTTCTAACCAATCGATGCATTTAAGAGTGAGGAATTGATAAATGAAATCTTGTTTT
TTAACTACTGACTTTTGTTTCCTCTGTTAGATCATATCTGCTGACCTAGTATTGGAAAACTTATTTAGGCATGGACGCAT
GTTTCTCCAGATCTCAGTGTTGGACGGCTTATGTCCATACTA------------TCATAACATTCACAAAAGTTTAGTAT
CATAGTGTTGTGTCATCTTGAACCAAGTTACAAACCAGATAATGTGAGAACAGATTATCTTTGACATATTGTGTAGGATT
TCTTGTTGTAAAAGGAAACTTGGAACTAATTTCTTT-CATTTGAAAACTAAG--TAGAATATTGTGATTTATGTTGACAT
AGCTATTTCACAGCACTTCCTGCGTTCTCGTGATAGTTCTTAACTAAAGCACCAAAAACAAACTAATGAAAGTGCTGCTG
CTACGCTTTTCAGACTACAGGACAGCAGGTTTGATATCATACT-------TGCACATTCTTGCATGCATATGTAATTTCC
ATGATATCATACTCCCTCCATCCATATATATAGGGCCTAATGTGTTTTTCGAGATTGCCTTTGACTATTGATAAGATTGA
CACTATACGAGATGTATAATGTGAAAATTATATCACTGGAAGCTCCTTTCACGTATGAATTTGACGGTATGCTTTGTGTA
ACTTGCATGTCAGATATTATTGCTCTAAAGTTAGCCTCGTAAAACGCATTAGGCCCTATATATATGGATAGAGGGAGTCT
ATAATTTCCATGTATCTCTTTGCTTTGGATGTTAAAGAAATGCCTTTGTTAGCATCAAAGATATGCATCATTCTTCCCTC
TGTTGACTTTTTTCTGCTTATGTACTTAGGTTTGCCCCCATCTGATGCACCAGAGAGATGGCTACCTTTTGAGACAGCTT
GCGAAAATGTGGTCTAACTATTGTATCATGGTTAAATGTGTATCTGGCTTCTTCAACTATTTGGACCGTTGCTTTGTTGA
GCAAAGAAAGCTACCTTGTCTTGAAGACACTGCTGCCACTTCTTTTTTCTCTACAGTAAGTGACTAAGTGTTGTGCGAGA
AATATTTTTGTTTTTACATCTGTT-TGTTTTTATTACATGTTTCTTACACATTTT---CTACCTAATATTTATGGACTTT
TTTCCTTTTGCTAGGTCTTTTCCTTCTTCAGTCATGAAGTATCAGACGCTCTGCTGACTTCGGTAATTCTTAGATAGCTA
TTTTTGCCTGGTTGTTGTTAAAAGCATTTTCTTCTGTACATAACAATTGATTGATCCAGATTCGCCAAGAGCGTGATGGA
ATCAATGCTGATATGGACATCTTGATGGGCATTATGCGTGGCATATGTCGCTCTGAAGTCAAATCCTTCATGAAAAATGC
TGTTGTTCAAGATACATATGCTTACTACTCCAGGAAAAGTTCTGAATGGATTGTTCAGTACCCTCTACAAGATTACCTTG
CCAAGGTCAGTAATTTAATCTTAACTAATGGGTCA----GTAGGTGTTATTTATTTCTTTTTAGTTTCTTAACACTGTTT
ATATGTGTGATATCTGTAGGTTCAGGATTGTATGGAGAAGGAAACCATGAGATTGATGAGCTATCTGAGTATTGCTGAGG
GTGATAGCACAGAGCTCTGTTTGAAGGTTCTCTTTAATTAAGAAAAAATAAATATGTTTTCACTTTGCAGCTTGAACATG
TCTGCCTTCTTCCAGTAGTAGTATGTAGGGTTGGTACCTCTTCTGTTGTGTTATTTGATGATTCATATTCGGTTTCCAAT
ATCTGTGTCC------TGGACATTTGGTTCCTAGTATT---TTGGTCCTGCTTCTAAAATGCCCAAATAAGATGTTAGTA
TGAAAGTAAAATACGTTATTATGATTGGCTC-AATTAGCAAATGTCTTAATTGTCTTCGACCACAGAAATTCAACTGCTT
GAATCATGCAAAATGCTATTTCCTGACATATTTCTGATCCTTCTACTGCCTCCACTCCTGTTGCAGGTTGTTAGTGCTCC
ATTGATGCAAACTTATGACAGCTATGCAAGAGAGAAACAGATTGGTGGCCAACTTTTGCTTCAAACATACAAGGTGAACT
CAGTTGCACTCGCATCATCGTTTGATACTACATA----------------------------------------------
-------------------------------------ATTTGTTTTTCCTTTCTGGATTACGACTAACCATTCCATTACT
CATATCAGACTGTAGAGGATGATCTGCTGGCCAGATGCAATCGCTTGACAATTGACAGCGGTGTGGACAACAGTTCTGGC
AGTTACATGGAGTAG-----------------------------------------------------------------
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>chr3A_1_TraesCS3A01G457400
TCCCCTCCCAGGCCTCCTCCGTCGAAGCACGGAAGCGGTTCTATCGTGTGGTCGCTGTTCCTCCCCTCTGGCCCGCTCTA
CCGGACTGGTGT-------GGAGTGGGGAGTGGGGAGGGGAGATTCACCCATCTAGGTTCGAATTTTCCTTAGTAGCGAC
TAACCCTAACTTGCTCGAATTGTAAATAGGTTTATCCTGGTATTTTCCTATTTTCCTTGCTGGGAGCAATAC-----TAG
TGCTAATCCAAGGTGGGATGTTTAACTGAGGCCTCATGCTTCCTTGTTAGATCGACCCTGTTCGTGC-TTTCTTGATACA
TGTCTTGTTAGATCCACCCTGTGTGCGCCTTCTCGATGCATGT-----------------------------------AG
TATTGTTCTGTTACTACAAATTAACAGTGAATGCTGAACTTTGGTTAAATTCTCTTCCTTAATTTGTGCTTGTATAGTTG
TATTAAGCACACCCGTTCATCTTATTTTGGATATAAGTAGGCTTTCTATTGTGAATTGAGTGTCACTCATTTGGTGGGGA
CGCTAGAACGCTAACCTGCCCACCAGGGTTTGACTGCCATTAGCAGAATTTATTTGGTGGGGTGCCTGGTGTCTCGTATG
TTCTT---------------------------------------------------------------------------
---GTACAAACAATCCAACAAGTGCTAGTGCCTTGTGGCCGAGTCTTCTTTCATATATACAAATAGGCTTTCTGTTTTGC
ATCATATGTTTATAGTTAAATATGGAAGACTTGAATGTTGAAATGCGTAGACAAAGTTTC-AAATCTCCTTGCAGAAGTT
GCGGCCTAGTTTCCTAAATGGCA-CATGAAGGCTCCTGGAACATTGTATATTAGTGAAATTAGGAGTA------------
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------------------------------------------------TTGTTTGTATGGTATCGTAGGCCTTTATTGAG
TTTGTATATCCAACTATGTTGGGTGATATTATTAATACCAGAAATT------------GATGCCTTTTACATAGTAAACA
ATTGTTAGATATCCAACATAATAGTTCTTCTTACAGATATTTCCATTGCTTCAGTTCACTGCAGGAGCAAAGCAGTAAAA
ATGAATGTGCACCTCAGCTTTGAGGATGGCTGGAAGGTCCTGGAGCAGGGCATTGTGACATGTTCAAAGATTTTGGAGGG
ATCCACTGGTACAAGGCCTACTGTTGCTGAGTACATGAATTGCTATGAGTATGATTCTATCATTATCACGTGTAATATGT
ATATCTTAACTAT-------------------------------------------------------------------
---------------------------------------------------------TACCAGTGAAGCACTTAAATTTG
TTGCACATGATATGTCCATATACTTTTCCAGCTGTGCTTATAGAATGGCGGTGCAGACAACCAGCTATTGTGAAGAGATG
TACAATGGTTACAAGGCTACACTTGCAGAATCTGTTCGTGCACTGGTACTATGTCGGCCTTTCATTCCATTTCACAGTTT
TCTATTGCCGAGTCAGTATTTGTAGTTCTAACCAATCGATGCATTTAAGAGTGAGGAATTGATAAATGAAATCTTGTTTT
TTAACTACTGACTTTTGTTTCCTCTGTTAGATCATATCTGCTGACCTAGTATTGGAAAACTTATTTAGGCATGGACGCAT
GTTTCTCCAGATCTCAGTGTTGGACGGCTTATGTCCATACTA------------TCATAACATTCACAAAAGTTTAGTAT
CATAGTGTTGTGTCATCTTGAACCAAGTTACAAACCAGATAATGTGAGAACAGATTATCTTTGACATATTGTGTAGGATT
TCTTGTTGTAAAAGGAAACTTGGAACTAATTTCTTT-CATTTGAAAACTAAG--TAGAATATTGTGATTTATGTTGACAT
AGCTATTTCACAGCACTTCCTGCGTTCTCGTGATAGTTCTTAACTAAAGCACCAAAAACAAACTAATGAAAGTGCTGCTG
CTACGCTTTTCAGACTACAGGACAGCAGGTTTGATATCATACT-------TGCACATTCTTGCATGCATATGTAATTTCC
ATGATATCATACTCCCTCCATCCATATATATAGGGCCTAATGTGTTTTTCGAGATTGCCTTTGACTATTGATAAGATTGA
CACTATACGAGATGTATAATGTGAAAATTATATCACTGGAAGCTCCTTTCACGTATGAATTTGACGGTATGCTTTGTGTA
ACTTGCATGTCAGATATTATTGCTCTAAAGTTAGCCTCGTAAAACGCATTAGGCCCTATATATATGGATAGAGGGAGTCT
ATAATTTCCATGTATCTCTTTGCTTTGGATGTTAAAGAAATGCCTTTGTTAGCATCAAAGATATGCATCATTCTTCCCTC
TGTTGACTTTTTTCTGCTTATGTACTTAGGTTTGCCCCCATCTGATGCACCAGAGAGATGGCTACCTTTTGAGACAGCTT
GCGAAAATGTGGTCTAACTATTGTATCATGGTTAAATGTGTATCTGGCTTCTTCAACTATTTGGACCGTTGCTTTGTTGA
GCAAAGAAAGCTACCTTGTCTTGAAGACACTGCTGCCACTTCTTTTTTCTCTACAGTAAGTGACTAAGTGTTGTGCGAGA
AATATTTTTGTTTTTACATCTGTT-TGTTTTTATTACATGTTTCTTACACATTTT---CTACCTAATATTTATGGACTTT
TTTCCTTTTGCTAGGTCTTTTCCTTCTTCAGTCATGAAGTATCAGACGCTCTGCTGACTTCGGTAATTCTTAGATAGCTA
TTTTTGCCTGGTTGTTGTTAAAAGCATTTTCTTCTGTACATAACAATTGATTGATCCAGATTCGCCAAGAGCGTGATGGA
ATCAATGCTGATATGGACATCTTGATGGGCATTATGCGTGGCATATGTCGCTCTGAAGTCAAATCCTTCATGAAAAATGC
TGTTGTTCAAGATACATATGCTTACTACTCCAGGAAAAGTTCTGAATGGATTGTTCAGTACCCTCTACAAGATTACCTTG
CCAAGGTCAGTAATTTAATCTTAACTAATGGGTCA----GTAGGTGTTATTTATTTCTTTTTAGTTTCTTAACACTGTTT
ATATGTGTGATATCTGTAGGTTCAGGATTGTATGGAGAAGGAAACCATGAGATTGATGAGCTATCTGAGTATTGCTGAGG
GTGATAGCACAGAGCTCTGTTTGAAGGTTCTCTTTAATTAAGAAAAAATAAATATGTTTTCACTTTGCAGCTTGAACATG
TCTGCCTTCTTCCAGTAGTAGTATGTAGGGTTGGTACCTCTTCTGTTGTGTTATTTGATGATTCATATTCGGTTTCCAAT
ATCTGTGTCC------TGGACATTTGGTTCCTAGTATT---TTGGTCCTGCTTCTAAAATGCCCAAATAAGATGTTAGTA
TGAAAGTAAAATACGTTATTATGATTGGCTC-AATTAGCAAATGTCTTAATTGTCTTCGACCACAGAAATTCAACTGCTT
GAATCATGCAAAATGCTATTTCCTGACATATTTCTGATCCTTCTACTGCCTCCACTCCTGTTGCAGGTTGTTAGTGCTCC
ATTGATGCAAACTTATGACAGCTATGCAAGAGAGAAACAGATTGGTGGCCAACTTTTGCTTCAAACATACAAGGTGAACT
CAGTTGCACTCGCATCATCGTTTGATACTACATA----------------------------------------------
-------------------------------------ATTTGTTTTTCCTTTCTGGATTACGACTAACCATTCCATTACT
CATATCAGACTGTAGAGGATGATCTGCTGGCCAGATGCAATCGCTTGACAATTGACAGCGGTGTGGACAACAGTTCTGGC
AGTTACATGGAGTAGAAAGGAAATGTTCTTCAGCTAACATTCATCGATAACCAAGCTTACATACAGGAAGGGGTTCTAGA
ACATGGCCTACATCTGGGGGAATTTTTTGTGCGGTTCGGTTTTTGGTACCAAAGCAGAGCTCGTGTACTCTGGATTTTGT
TGGCGAGGTTTGGCTAGATTAAACGCTATACTGAATCTGCAGGGGATACCTCTTTAGG-GCCGCCTCCTACCCCATTATG
GTTAACAGCATTTGAAATGTACATGATGGCGGGTCAATTTATGCCAATGGCAGTTTATTTTGATTGTCATCTAGCGAACA
TTAGGCCGGTCAGCACCTAGCACTCTTAGTGGCTGGACATGGAGTATGTCATGACACCAGAATGATTGGTGCATTGCC--
TGTGCCTTTGGCGTGCTTCTGATGCTGTCTATGGTTT-AATCTTATCTATGACTTGATGCTACTTATCTGTGTTTGTGTG
CTTGCCTGCATCGCTAAACTGTAGATTAGATGGGTTTCTGTTTGTTCCTGGTTTAGTTTGCCGGTAAGGTTGCAAAGTTG
CTATTATGACCTAGAGCCAGTGTGTGGTAATTGTTTGCATTTTTAGATTCTATAAACCCAACTTGCATTATGAATGCTTC
ATGGATCCTATACCTGCTTGTGGCCTGATTTTGAGTGATTCTCACAGCATAATCGTATGTGAATCTCATTTATTGGGAAG
TGCTGAAACTATTTCAGCAACATTCGAAGAGGGTACTTGGCCATAGTATTTATCCTTTGCATTCTCTTACTTTCTAGTGA
TGGATAAAGGGTTTTCTCTCCAATTGATTGAAAGAATAACCAGTTTGAAGTCCCTTTATCTGTACCTTTGAAGTGAATAT
CAGCTTCCGATTGATGGAGAGTATAAATCAGCCTGGAAAGACGATAGAACACACACTTTTAATTGGCAAATTGTACATTA
CTGCCAAGCGTATTCAGGAGCAGCAGATGCACCATGAATCTTAATTACTTGGCATTACT
>chr3D_1
TCCCCTCCAAGGCCTCCTCCGTCGAAGCACGGAAGCGGTTTTATCGTGTGGCCGCTGTTCCTCCCCGCTGGCCCGCTCTA
CCGGACTGGTGT-------GGAGTGGGGAGTGGGGAGGGGAGATTCACCCATCTAGGTTTGAATTTTCCTTAGTAGCGAC
TAACCCTAACTTGTTCGAATTGTAAATAGGTTTATCCTGGTTTTTTCCTTGCTGCGAG-------------C-----TAA
TGCTAATCCAAGGTGGGGTGTTTAACTGAGGCTA-ATGCTTCCTTGTTAGATCGACCCTGTTCGGGC-CTTCTTGATACA
TGTCTTGTTAGATCGACCCTGTTCGGGCCTTCTTGATGCATGTTTGAGG---GGGAAACAGTCGACCATGTTCTTTGTAG
TATTGTTCTGTTACTACAAATTAACAGTGAATGCTGAACTTTGGTTAAATTATCTTCCTTAGTTTGTGCTTGTATAGTTG
TTTTAAGCACACTCGTGCATCTTATTTTGGATCTAAATAGGCTTTCTACTGTGAACTGAGCGTCGCTCAGTTGGTGGGGA
CGCTTGAACGCTAACCTGTCCACCACGGTTCGACTGCCATTAGCGGAATTTATTTGGTGGGGTGCCTGGTGTCTCGGATG
TTCTTGTACTCCCTCCGTCCCATAATGTAAGACGTTTTTTGACACTAGAGTCAAAAAACGTCTTACATTATGGGACGGAG
GGAGTACAAACAATCCGCCAAGTGCTAGTGCCTTGTGGCTGAGTCTTCTTTCATATATACAAATAGACTTTCTGTTTTGC
ATCATATGTTTATAGTTAAATATGGAAGACTTGAATGCTGAAATGCGTAGACGAAGTTTCAAAATCTCCTTGCAGAAGTT
GTGCATGAT---------------------GGCTTCTGGAACATTGTATATTAGTGAAATTAGGAGTACTAGCAAAAGGG
CACGTGCGTTGCAACGGGAGAAAAGAATACCACACGCTCTTAATTTAGAAAAAAAAAGGTCTATAATCTGAGTATTTGTA
GCTACGACCCAAACAAAGATGGTCTTTGCCTACAAAAGGGCAAGTTCAAGATTTCACATGTCTTTGTAGATTTAATACGT
ACAAAGAAACGGGCAAGTGATCTTCAATTTCGTCCCCAATCCCGATTTTGCTGAGATGTTCATCCACAATCCGAATCAGT
ACCGATATGAAAGAAAGACGAATAATGCACTGTTTATTAAGATTACACCCTAGATAGTATTTTTTAAATGGTTAACAGGT
AAAATAACATCATATTCAGATTCCATATATTTTTCTAATCAAATTCCATATATAATATGTTAAATTTAGAGTTACGGTTT
AGAAGATACGAGTATTTAAAAAAACATTTAATATATAGTGCGGGTTTAATATAAGAAACATCAGGGGGGTTTCTATAAAA
TAGTATGACGGACTAAGAATACCTATTTCTTTTATTAGTAGGTATAGATTGTTTGTATGGTATCGTAGGCCTTTATTGAG
TTTGTATATCCAACTAAGTTGGGTGATATTATTAATACCAAAAATT------------GATGCC-TTTACATAGTAAACA
ATTGTTAGATATCCAACATAATAGTTCTTCTTACAGATATTTCCATTGCTTCAGTTCATTGTAGGAGCAAAGCAGTAAAA
ATGAATGCGCACCTCAGCTTTGAGGATGGCTGGAAGGTCCTGGAGCAGGGCATTGTGACATGTTCAAAGATTTTGGAGGG
ATCCACTGGTACAAGGCCTACTGTTGCTGAGTACATGAATTGCTATGAGTATGATTCTATCATTATCACGTGTAATATGT
ATATCTTAACTAT-------------------------------------------------------------------
---------------------------------------------------------TACCAGTGAAGCACTTAAATTTG
GTGCTCATGATATGTCCATATACTTTTCCAGCTGTGCTTATAGAATGGCTGTGCAGACAACCAGCTATTGTGAAGAGATG
TACAATGGTTACAAGGCTACACTTGCAGAATCTGTTCGTGCACTGGTACTATGTCGGCCTTTCATTCCATTTCACAGTTT
TCTATTGCCGAGTCAGTATTTGTTGTTCTAACCAATCGACGCATTTAAGAGTGAGGAAATGATGAATGAAATCTTGTTTT
TGAACTACTGACTTTTGTTTCCTCTGCTAGATCATATCTGCTGACCTAGTATTGGAAAACTTATTTAGGCATGGACGCAT
GTTTCTCCAGATCTCAGTGTTGGACGG------------CTA------------TCATAACATTCACAAAAGTTTAGCAT
CATAGTGTTGTGTCATCTTGAACCAAGTTACAAACCAGATAATGTGAAAACAGATTATCTTTGACATATTGTGTAGGATT
TCTTGTTGTAAAGGGAAACTTGGAACTAGATTATTTGCATTTGAAACCATAG--TAGAATATTGTGATTTATGTTGACAT
AGCTATTTCACAGCACTTCCTGCGTTCTCGTGATAGTTCTTAACTAAAGCACCAAAAACAAACTAATGAAAGTGCTGCTG
CTACGCTTTTCAGACTACAGGACAGCAGGTTTGATAAATAAGGGGGCCAATGCACATTCTTGCATGCATACATAATTTCC
ATGATATCATACTCCCTCCATCCATATATATAGGGCCTAATGTGTTTTTCGAGATTGCCTTTGACTATTGATAAGATTAA
CAGTATACGAGATGTATAATGTGAAAATTATATCAC--------------------GAATTTGACGGTATGCTTTGTGTA
ACTTGCATGTCATATATTATTGCTCTAAAGTTAGCCTCGAAAAGTGCATTAGGCCCTATATATATGGATAGAGGGAGTAT
ATAATTTCCATGTTTCTCTTTGCTTCAGATGCTAAAGAAATGCCTTTGTTAGCATGAAAGATATGCATCATTCTTCCCTC
TGTTGACTTTGTTCTGCTTATTTACTTAGGTTTGCCCCCATCTGATGCACCAGAGAGACGGCTACCTTTTGAGACAGCTT
GCGAAAATGTGGTCCAACTATTGTATCATGGTTAAATGTGTATCTGGCTTCTTCAACTATTTGGACCGTTGCTTTGTTGA
GCAAAGAAAGCTACCTTGTCTTGAAGACACTGCTGCCACTTCTTTTTTCTCTACAGTAAGTGACTAAGTGTTATGCGAGA
AATATTTTTGTTTTCACATCCGTT-TGTTTTTATAACATGTTTCTTACACATTTT---CTACCTAATATTTATGGACTTT
TTTCCTTTTGCTAGGTCTTTTCCTTCTTCAGTCATGAAGTATCAGACGCTCTGCTGACTTCGGTAATTCTTAGATAGCTA
TTATTGCCTGGTTGTTGTTAAAAGCATTTTCTTCTGTACATAACAATTGATTGATCCAGATTCGCCAAGAGCGTGATGGA
ATCAATGTTGATATGGACATCTTGATGGGCATTATGCGTGGCATATGTCGCTCTGAAGTCAAATCCTTCATGAAAAATGC
TGTTGTTCAAGATACATATGCTTACTACTCCAGGAAAAGTTCTGAATGGATTGTTCAGTACCCTCTACAAGATTACCTTG
CCAAGGTCAGTAATTTAATCTTAACTAATGGGTCACCGAGTAGGTGTTATTTATTTCCTTTTAGTTTCTTAACACTGTTT
ATATGTGTGATATCTGTAGGTTCAGGATTGTATGGAGAAGGAAACCATGAGATTGATGAGCTATCTGTGTATTGCTGAGG
GAGATAGCACAGAGCTCTGTTTGAAGGTTCTCTTTAATTAAGAAAAAATAAATATGTTTTCACTTTACAGCTTGAACATG
TTTGCCTTCTTCCAGTAGTAGTATGTAGGGTTGGTACCTCTTCTGTTGTGTTATTTGATGATTCATATTCGGTTTCCAAT
ATCTGTGTCC------TGGACATTTGGTTCCTAGTAAT---TTGGTCCTGCTTCTAAAATGCCAAAATAAGATGTCGATA
TGGAAGTAAAATACGTTATTATGATTGGCTC-AATTAGCAAATGTCTTAATTGTCCGAGACCACAGAAATTCAGCTACTT
GAATCATGCAAAATGCTATTTCCCGACATATTTCTGATCCGTTTACTGCCTCCACTCCTGTTGCAGGTTGTTAGTGCTCC
ATTGATGCAAACTTATGACAGCTATGCAAGAGAGAAACAGATTGGTGGCCAACTTTTGCTTCAAACATACAAGGTGAACT
CAGTTGCACTTGCATCATCGTTTGTTACTACTTA----------------------------------------------
-------------------------------------ATTTGTTTTTCCTTTTTGGATTACGACTAACCATTCCATTACT
CATATCAGACTGTAGAGGATGATCTGCTGGCCAGATGCAGTCGCTTGACAATTGACAGCGGTGTGGACAACAGTTCTGGC
AGTTACATGGAGTAGAAAGGAAATGTGCTTCAGCTAACATTCATCGTTAACCAAGCTTACATACAGGAAGGGGTTCTAGA
ACATGGCCTACATCTGGGGGAATTTTTTGTGCGGTTCGTTTTTTGGTACCAAAGCAGAACTCGTGTACTGTGGATTTTGT
TGGCAAGGTTTGACTAGATTAAACGCTATACTGAATCTGCAGGGGATACCTCTTTAGGCGCCGCCTCCTACCCCATTATG
GTCAACAGCATTTGAAATGTACAGGATGGCGGGTCAATTTATGCCAATGGCAGTTTATTTTGATCGTCGTCTATCGAACA
TTAGGCCGGTCAGCACCTAGCACTCTTAGTGGCTGAACATGGATTATGTCATGACACCAGAATGATTGGTGCATCGCC--
TGTGCCTTTGGTGTGCTTCTGATGCTGCCTATGGTTT-AATCTTATCTATGACTTGATGCTACTTCTCTGTGTTTGTGTG
CTTGCCTACATTGCTAAACTGTAGATTAGATGGGTTTATGTTTCTTCCTGGTGTAGTTTGCCGGTAAGGTTGCAAAGTTG
CTATTATGATCTTGAGCCAGTGTGTGGTAATTGTTTGCAATTTTAGATTCTATAAACCCAGCTTGCATTATGAATGGTTC
ATGGATCGTATACCTTGT--TGGCCTGATTTGGAGTGATTCTCGCAGCATAATCGTATGTGAATCTCATTTTTTGGGAAG
TGCTGAAACTATTTCAGCAACATTCGAAGAGGGTACTTGGCCATAGTAA----CCTTTGCACTCTCTTACTTTCTAGTGA
TTGATAAAGGGTTTTCTTTCCAATTGATTGAAAGAATAACC-------------------------TTTGAGGAGAATAT
CAGCTTCCAATAA----------------------------------AACACACACTTTTAATTGGCAAATTGTACATTA
CTGCCAAGCGTATTCAGGATTAGCAGATGCACCATGAATCTTAATTACTTGCATTA---
>chr3B_1
TCTCCTCCCAGGCCTCCTCCGTCGAAGCACGGAAGCGGTCCTATCGTGTGGCCGTTGTTCCTCCCCGCCGGCCCACTCTA
CTGGACTGGTGTGGAGTGGGGAGTGGGGAGTGGGGAGGGGAGATTCACCCATCTAGGTTTGAATTTTCCTTAGTAGCGAC
TAACCCTAACTTGTTCGAATTGTAAATAGGTTTATCCTGGTATTTTCCTTGCTGCGAG-------------CAATACTAA
TGCTAATCCAAGGTGGGATGTTTAACTGAGGCGTCATGTTTCCTTGTTAGATCGACCCTGTTCCTGCATTTCTTGATACA
TGTCTTGTTAGATCCACCCCGTGCGCGCCTTCTCGATGCATGTTTGGGGGTGGGGAGACGGTCGACCATGTTCTTTGCAG
TATTGTTCTGTTACTACAAATTAACAGTGAATGCTAAACTTTGGTCAAATTATCTTCCTTAGTTTGTGCTTGTATAGTTG
TTTTAAGCACACACGTGCATCTTATTTTGGATATAGATAGGCTTTCTATTGAGAACTGAGCGTCTCTCAGCTGGTGGGGG
TGCTTGAACGCCAACCTGCTCACCACGGTTCGACTCCCATTTGCAGAATTTATTTGGTGGGGTGCCTGGTGTCTCGGATG
TTCTT---------------------------------------------------------------------------
---GTACAAACAATCCGCCAAGTGCTACTGCCTTGTGGAAATAG------------ATACAAATAGGTTTTCTTTTTTGC
ATCATATGTTTATAGTTAAATATGGACGACTTGAATGTTGGAAAGCATAGCCGAAGTTTC-AAATCTCCTTGCAGAAGTT
GCGGCCTAGTTTCCTAAATGGGTGCATGAAGGCTTCTGGAACATTGCATATTAGTGAAATTAGGAGTA------------
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------------------------------------------------TTGTTTGTGTGGTGTCGTAGACCTTTATTGAG
TCTGTATATCCAACTAAGTTGGGTGATATTATTAACACAAAAAATTATTTGTGTTCTGGATGCC-TTTACATAGTAAAAG
-TTGTTAGATATCCAACATA-TAGTTCCTCTTACTGATATTTCCATTGTTTCAGTTCACTGTTGGAGCAGAGCAGTAAAA
ATGAATGTGCACCTCAGCTTTGAGGATGGCTGGAAGGTCCTGGAACAGGGCATTGTGACATGCTCAAAGATTTTGGAGGG
ATCCACTGGTACAAGGCCTACTGTTGCTGAGTACATGAATTGCTATGAGTATGATTCTATCATTTTCGCGTGTAATATGT
AT--CTTAACTATTACTCCCTCTGTAAACTAATATAAGAGCGTTTAGAATACTAAAGTAGTGATCTAAACTAATATAAGA
GCGTTCAGAATACTAAAGTAGTGATCTAAACGCTCTTATATTAGTTTAGAAAGGGAGTACCAGTGAAGCATTTAAATTTC
TTGCTCATGATATGTCCATATACTTTTCCAGCTGTGCTTATAGAATGGCTGTGCAGACAACCAGCTATTGTGAAGAGATG
TACAATGGTTACAAGGCTACACTTGCAGAATCTGTTCGTGCACTGGTACTATGTTGACCTTTCATTCCATTTCACAGTTT
TCCATTGCTGAGTCAGTATTTTTAGTTCTAACCAATCGACACATTTAAGACTGAGGAAATGATAAGTGATATCTTGTTTT
TCAACTACTGACTTTTGTTTCCTCCGTTAGACCTTATCTGCTGACCTACTATTGGAAAACTTATTTAGGAATGGACGCAT
GGTTCTGCAGATCTCAGTATTGGACGG------------CTTATGTCCATACTTTCATAACACTCACAAAAGTTTAGTAC
CATAGTGTTGTGTCATCTTGAACCAAGTTACAAGCCAGACAAGC------CAGATTATCTTTGTCATATTGTGTAGGATT
TCTTCTTGTAAAGGGAAACTTGGAACTAATTTATTTGCATTTGAAAACCATATATAGAATATTGTGATTTATGCTGACAT
AGCTATTTCACAGCACTTCCTGCGTTCTCATGATAGTTCTTAGCTAAAGCACTAAAAACAAACTAATGAAAATGCTGCTG
CTATGCTTTTCAGACTACAGGGCAGCAGGTTTGATAAATAAGGGGGCCAGTGCATATTCTTGCATGCATATATAATTTCC
ATC-----------------------------------------------------------------------------
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------------TATCTCTTTGCTTTGGATGCTAAAGAAATGCCTTCGTTAGCATCAGAGATATGCATCATTCTTCACAC
TGTTGACTTTTTT-TGCTTATTTACTTAGGTTTGCCCCCATCTGATGCACAAGAGAGACGGCTACCTTTTGAGACAGCTT
GCGAATATGTGGTCTAACTATTGTATCATGGTTAAATGTGTATCTGGCTTCTTCAACTATTTGGACCGTTGCTTTGTTGA
GCAAAGAAAGCTACCTTGTCTTGAAGACACTGCTGCCACTTCTTTTTTCTCTACAGTAAGTGACTAAGTGTTATGCAAGA
AATATTTTTGTTTTCACATTTTTCGTATTTTTATTACAAGTTTCTTACACATTTT---CTACCTAATATTTATGGCCCTT
TTCCCTTTTGCTAGGTCTTTTCCTTCTTCAGTCATGAAGTATCAGACGCTCTGCTGACTTCGGTAATTCTTAGATAGCTA
TTTTTGCTTGGTTGTTGTTAAAAGCATTTA-TTCTGTACATAACAATTGATTGATCCAGATTCTCCAAGAGCGTGATGGA
GGCAATGCTGATATGGACATCTTGATGGGCATTATGCGTGGCATATGTCGCTCTGAAGTCAAATCCTTCATTAAAAATGC
TGTTGTTCAAGATACATATGCTTACTACTCCAGGAAAAGTTCTGAATGGATTGTTCAGTACCCTCTACAAGATTACCTTG
CCAAGGTCGG--------TCGTAACTAATGGGTTACTGAGTAGGTGTTATTTCCT--TTTTTATTTTCTTAACACTGTTT
ATATGTGT--TATCTATAGGTCCAGGATTGTATGGAGAAGGAAACCATGAGATTGATGCACTATCTGTGTATTTCTGAGG
GAGATAGCACAGAGCTCTGTTTGAAGGTTCTCTTTAATTAAGGGAA---AAAAATGTTTTTTCTTTTTAGCATGAAAATG
TTTGCCTTCTTCCAGTAGTAGCATGTAGGGTCGGTACCTCTTCTGTTGTGTTATTTGATGATTCATATTCGGTTACCAAT
ATCTGTACTCTGTGTTTGGACATTTGGTTACTAGTAATATTTTAGTCCTGCTTCTAAAC-GCCAAAATAAGATGTAGATA
CGAAAGTAAAATATGATATTATGATTGCCTCAAATCAGCAAATGTCTTAATTGACCAAGAGCACAGAAATTCAGCTGCTT
GAATCATGCAAAATGCTATTTCCTGATATATTTCTCATCCTTGTACTGCCTCTGCTCCTGTTGCAGGTTGTTAGTGCTCC
ATTGATGCAAACTTATGACAGCTATGCAAGAGAGAAACAGATTGGTGGCCAACTTTTGCTTCAAACATACAAGGTGAACT
CAGTTGCACTTGCATCATTGTCTGATACTTCATTTTTTTTTCTTTTCTGTATTATGACTAAACATTTCAAACATACAAGG
TGAACTCAGTTGCACTTGCATCATTGTCTGATACTTCATTTTTTTTTCTTTTCTGTATTATGACTAACCATTCCTTTACT
CATATCAGACAGTGGAGGATGATCTGCTGGCCAGATGCAATCGCTTGACAATTGACAGCGGCGTGGACAACAGTTCTGGC
AGTTACATGGAGTAGAAAGGAAATGCACTTAAGCTAACATTCATCTATAACCAAGCTTACATATGGGAAGGGGTTCTAGA
ACATGGCCTACATCTGGGGGAATTTTTTGTGCGGCTCGGTTTTTGGTACC-------------------GTGGATTTTGT
TGGCGAGATTCGGCTAGATTAAACGCTATACTGAATCTGCAGGGGATACCTCCTTAGTGCT-GCCTCCTACCCCATTATG
CTCAACAGCATTTGAAATGTACAGGATGGCGGATCAATTTTTGCCAATGGCAGTTTATTTTGATCGCCGTCTAGCGAACA
TTAGGCAGGTCAGCAGCTAGCACTCTTAGTGGCTGGACATGGATTATGGCATGACACCGCAGTGGTTGGTGCGATGCCTG
TGTGCCTATTGTGTGCTTCTGATGCTGTTTATGGTGGAAAACTTATCTGTGACTTTATGCTATTTCTCTGTGTTTGTGTG
CTTGCCTACATTGCTAAACTGCAGATTGGTTGCGTTTTCGTTTATTCCAAGTCAAGTTTGCTGTTAAGGTTGCATGTTGC
T-------------------------------------------------------------------------------
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>chr2B_2335
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----------------------------------------TATCTGGCTTCTTCAACTGTTTGGACCATTGCTTTGTTGA
GCAAAGAAAGCTACCTTGTCTTGAAGACACTACTGCCACTTCTTTTCTCTCTACAGTAAGTGACTAAGTGTTATGCGAGA
AATATTTTTGTTTTCACATTTTTCATGGTTTTATTACAAGTTTCTTACACATTTTTTTCTACCTAAGATTTATGGCCCTT
TTCCCTTTTGCTAGGTCTTTTCCTTCTTCAGTCATGAAGTATCAGACGCTCTGCTGACTTTGGTAATTCTTATATAGCTA
TTTTTGCTTGGTTGTTGTTAAAAGCATTTA-TTCTGTACATAACAATTGATTGATCCAGATTCGCCAAGAGCGTGATGGA
ATCAATGCTGATATGGACATCTTGATGGGCATTATGCGTGGCATATGTCTCTCTGAAGTCAAATCCTTCATGAAAAATGT
TGTTGTTCAAGATACATATGCTTACTACTCCAAGAAAAGTTCTGAATGGATTGTTTAGTACCC-------GAGTACCTTG
CCAAAGTCAG--------TCGTAACTAATGGGTTACTGAGTAGAGGTG--TTGTTTCCTTTT--TTTCTGAACACTATTT
ATATGTGT--TATCTATAGGTCCAGGATTGTATGGAGAAGGAAACCATGAGAATGA------------------------
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-----------------------------------------------------------
>SNPs
---------------------------------------------------S--------------S-------------
-----------------------------------------------------------S--------------------
-------------S-----------------------------------SSS-S-SSSSSSSSSSSSSSSS--------S
--------------------------------S-----------------------------------------------
-----------------------S--------------------------------------------------------
---------------------------------------------------S---------S------------------
-S----------S---S-------------------S------------------S----S---S----S----------
----S--------------------S----S---------------------------------------------S---
--------------------------------------------------------------------------------
----------------SS---------------------S----------------------------------------
----------------------------------------------------S---------------------------
---------------------SS-----------S---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----------------------S-----------------------S---------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S--------------------------------------------S------------------------------
--------------------------------------------------------------------------------
---------------------------------------S------------------S---------------------
-S------------------------------------------------------------------------------
---------------------------SSSSSSSSSSSS-----------------------------------------
-----------------------------------------------S--------------------------------
------------S-------------------S---------------S-------------------------------
--------------------------------------------------------------------------------
------------------------------------SSSS-SS----------------------------S--------
------------------------------------------------------------------------------S-
--S---------------------------------SSSSSSSSSSSSSSSSSSSS------------------------
------------S--------------------------S---SS---------------------------------S-
-------------------------------S------------------------------------------------
---------------------S------------------------------------S---------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
-S----------------------------------------------------------------S-------------
-S------------------------------------------------------------------------------
------------------------------------S--------------------------S-----------SSS--
-------------------------------------------------------SSS---------------S------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------S-----------------------------------------------------
----------------------------------------------------------S----------S----------
--------------------------------------------------------------------------------
--S--------------------S----------------------------------------S---S-----------
-------------------------------------------S------------------------------------
-----------S-----------------------------------------------------S--------------
-------S---S-------------------------S-----S--------S---------------------------
---------S--S--------------------------S--------------------S---------------S---
-------S-------SS-SS-----------S-----------S---------------------------S--------
------------------------------------------------SSSSS--------S------------------
-S---------------S-----------------------SSSSSSSSSSSSSSSSSSSSSSSSS-----S-S------
--------S--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------
-------------------SS------------------------------SSS-SSSS
>forward_565
--------------------------------------------------------------------------------
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-----------------------------------------------------------------CTCATTTGGTGGGGA
CGCTA---------------------------------------------------------------------------
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>reverse_3099
--------------------------------------------------------------------------------
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----------------------------------------------------------TGGCTACCTTTTGAGACAGCT-
--------------------------------------------------------------------------------
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>forward_2348
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--------AGATCTCAGTGTTGGACGGC----------------------------------------------------
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-----------------------------------------------------------
>reverse_4203
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------------------------------------------CTACTGCCTCCACTCCTGTTG-----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------
>forward_2349
--------------------------------------------------------------------------------
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---------GATCTCAGTGTTGGACGGCT---------------------------------------------------
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>reverse_4587
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------TCTTCAGCTAACATTCATCGATAACC----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------
