>input_sequence_29722
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----------------------------------ATGGCGAAGGTCGCTGCCATGGCCATGGAGAAGGTGGACGCCAAGG
ACCGGGAGAAGATCGAGGCCGTCCGCAAGGTGATGCGCAAGCAGGCGCCGCTCTCCCCCAAGCAGGTACGCACCGCCCGT
GCCCACCTCCATCTCTCCG----CGGCCATGCCTCCTTCTTGGGATCGTTTCTTGACGCCGGCC---------GGTCTGC
GCGCAGGCGGAGTACTGCAACGACGCGTGCGTGGAGCGGTTCCTCCGGGCCAAGGGCGACAACGTGAAGAAGGCGGCCAA
GACCCTGCGCGCCGTCCTCTCCTGGAGGGAGACCATCGGAGCAGGTGCGTTCCGCTTCCCTTCCACACTCTATCTCCCGC
TTGTTTCCGGCAGCGAATGTGATTCTCCGGCCTGCTATTTTT-GAAATCCGTTGCACATGCAGAAAAGGGGCGGTTCATT
AATACTCCTACTACATACGGCGCTCTGATGTGCTCTGTTTTTGTTGTGTTCTCGTACCTACGGCACAGTGTATTCTAGTC
AGGTTACTGGTAGAA--GTGCGTATCGAATTTATTGTGCCGGGCTCTTTGCTTTGCTTGGCATCCCGTGTTCCCGTGTAT
GTACAGTACGTGCAAGCGAGGACAGTTTCAACAGTGCCCCCTTG--TTGTTGCTACTATGTTTTTGACTGTTTTGTGTTG
CTGTTGACGGCGAGCAGATCACATCATGGCCGACGAGTTCTCCGGCGAGCTGTCCGACGGCATGGCCTACGTCGCCGGGC
ACGACGACGAGAACCGCCCCGTCCTGGT---ACGCTCTCTGCAGTTGGGTGTAAATGTTTGGAGCGACACTGGCTTGGCT
CTAACCGTGAGGCTTTTTGTTTTGTTTTCTTGGCAGATGTTCAAAATCAAGCAGGATGACTACCCCAAGTACCAGCCCCA
GAAATC--------------------------------------------------------------------------
-----------------GTTCGTGCGGTTCCTGGTGTTCACGCTGGAGGTGGCGGTGGCGTCCATGAACCGCTTCGTGGA
CGAGTTCGTGCTCCTCTTCGACGCAAGTAAGCAATCTCCGTCT-------------CCGTTGGGTCGATCGGAAGGGAAA
GGGAAGCAGAGGCAGATAGCGCGCGGTAGTGGTCGC-----------ATCGCAATCGCATCCATTTTGACAATGCCCTGC
GACG-GACTGCAAGC-------------GCAGCGCGCACTGACTTAGACGACTGGCACCAGTCG----TCAGTACGCTCT
GCTAGGCGCACATGAATCCCTGGCAGCTCCCAACAACGACAGACACCTTCCCATGGACGGACGGACGGACGGACGGACGC
ACGAACTGCACTGCGCCCGTATCGTGCTGCGACCCTGCTCGCATTGTC-----TCCCACGCACCTTCTTTTTAGGTTTTT
CACTCGTTTGTCTTCCGTATGCATGCTACGTGGGTCAAGCGCGGGCGGGCGGCCGGGCGGTCCCCGGGCTTGACTCGGGC
GGTACCGTTCGCTTTACCGGCCATGATGCCACGCTGCGTGCACAGTTATCGCTGCAGTC---------------------
--------------CGGCCGGCTTCCCGCCGGTGCGGTTTGAATCCTGGCGAGAATGATTGGGTTCCACGCCCGCTTTGC
CCGGCTGCGTGGAAAGCG---------------------------AAGTAGACTACTACTG-TGTGTGCATGGTGGTATG
GGGAGCTGGTCGTTGACGGGACGAATCGGGTTTTCGTGATGCTCGCAGGCTTTTTCCGGTCGGCGTCGGCTTTCCTCAAC
CTGCTGATGGGCACGCTCAAGATCGTCGCCGACTACTACCCCGGCCGCCTCCACCGCGCCTTCGTCATCGACCCGCCCTC
CCTCTTCTCCGTCATGTGGAAGGTAACTAACCGC------------------------------TCGTGATCATGGTGCA
AC-TTCATGTGCGTGGCAATGGCAAGTGGAATTTA---TATGAAAGAAACGTGTGTTTTGCTTTGTGACAGGGGGTGCGG
CCGTTCGTGGACCTGGCGCCGGCGACGGCGGTGGTGAGCTCGCTGGACTTCGAGGACTCGCTGGAGGACGCGTCCTTCAC
GGCCTACCCGCGGACGGCGTCGCTGCGCTTCGAGCCGTCCGTGGCGGCCGCCGTGCTGACGGCGGGGGGGAAGGGGGGAG
C---CGCCGTGGGCTCCGCCTCCTCGCGCTTCGCCTTCAGCGTGTCGGACAACGCGCTCAAGCCGTGGTACCTCTCCACC
ACGCCGGCGCCGGGCCCGCGCTCCGTTGTGCCGGCCTCCTCCAGCCCCTCCCTCGTCGGCGCGTCCCCGCTCTCCGCGCG
CTCCTTCTCCTTCGCCTCGCCCGCCGCGCGCTCCACGCCCACACCCCTCCAGCAGCAGCAGCAGCCGCGCGCCACCCGCG
CGCCGCCGACGCCGTCCGCGGCCAAGGGAGGGCAGAAGGCGCCCTCCCCTCTGCCGCCGACGCCGCCGCAGCAGCAGCAG
CAGTTCCCGCGGACGCCGAGGCCGTCGTTCCTGCAGTCGCCGTTCACGTTCCGCAAGGACGGGCAGGCGAGCCGGGTGGA
GCGGGAGCGCGAGTCCTTCCTGCCCTTCCTGCGCTTCTACCGCCGGCCCTACGACGAGATCACCTACCGCGCCATGATGC
GGCGGCCGCTGGGCGGGCTCATTGCCATCGTCGCCGAGGACTTCAGGCCGATGCCCGCCCAGCCGCCGCTGCGCCGGCAC
GCCGGAGCGCTCCATCACCAGCACCACCACCATCAGCACCAGCACCAGCACCAGAGGATCTGA-----------------
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>chr4A_1_TraesCS4A01G065900
AAGCGTATACGCAACGGGTAGACCGGGTCTATCATTAAATGAATAGAATAAATGACGAACGGCTACAATTTTCGATTTCA
AAAATTGAACGCTCCGAGCGCGTGTTGCTAACGCTCTCACGGAGTTTGCTCCTTGTGTTTTGGGATTGACGGCGTCACCG
ACCGTTGGCACAATCTGTACACAATTAACAGTCCCTCGCAAGACAATGACAATGTGTAATTACTAGATACAAATATATTA
TTTTTGTGGTGAAGTACATAGAAAATATCGCCATATTTGAAAATGCAGCATGTTGTAAACCACAATGGTTGCTCATATTT
TCTCGGTG-----------------------------------GGTTAACTAGGGCAATATATAATGTACCCATAAGCCA
TAACACAAAAAATGATGAGGTAATTTAGGCACCTATCATGATCATGAAGGGGGGCCAAAGCACCTTTTTT-TCAGCCAAA
AATAGAGCTATAAACCCAGGGATAGACACACGGCCGTAAAGCACAATCCCATGGTTTATTTAGAGCTATATATAGTAGTG
ATCATCATGACACAGACAATGATGAGATTCAATTCTGAAAACATGGAGAAACTCATCATCAAATCAAAGATATGAAAAGC
AAAGAAAGGCGTAAAAGGGCGTCTCCCTAATAATCAGACGCACTCGGTAAGCAGTTC-----GTCCACGGACAGTTATTT
GGTGCCAATCGGCCAAGAATACCACGAGCAAAAGTCGACGACAATCCCACCGGGGGGCGCGCGGGCAAGCAAACAAACGG
CC------GTCTCCGTCTCCA----CGTTTCGCCGTCAGCGCCATTGCCTCGGCCGGGAGCGCCCTCTGGCTTAAACGGC
ACCTTCGCCCCCGCCCGCGGCTTATAATACTCCTCCTCCTCCTCGTCGTCTCCATTCAGTCCCTTCCTGCTTCTCT----
-----------CTCTCAGGCCACCGCCACCCGCTGTCCTCTCTCCCGTAGTTGGTTCGTT----CACACTCGCCCCGCTC
CTCCGTGTCCATCTCCTCCCTCTC----GGCGACATGGCGAAGGTCGCTGCCATGGCCATGGAGAAGGTGGACGCCAAGG
ACCGGGAGAAGATCGAGGCCGTCCGCAAGGTGATGCGCAAGCAGGCGCCGCTCTCCCCCAAGCAGGTACGCACCGCCCGT
GCCCACCTCCATCTCTCCG----CGGCCATGCCTCCTTCTTGGGATCGTTTCTTGACGCCGGCC---------GGTCTGC
GCGCAGGCGGAGTACTGCAACGACGCGTGCGTGGAGCGGTTCCTCCGGGCCAAGGGCGACAACGTGAAGAAGGCGGCCAA
GACCCTGCGCGCCGTCCTCTCCTGGAGGGAGACCATCGGAGCAGGTGCGTTCCGCTTCCCTTCCACACTCTATCTCCCGC
TTGTTTCCGGCAGCGAATGTGATTCTCCGGCCTGCTATTTTT-GAAATCCGTTGCACATGCAGAAAAGGGGCGGTTCATT
AATACTCCTACTACATACGGCGCTCTGATGTGCTCTGTTTTTGTTGTGTTCTCGTACCTACGGCACAGTGTATTCTAGTC
AGGTTACTGGTAGAA--GTGCGTATCGAATTTATTGTGCCGGGCTCTTTGCTTTGCTTGGCATCCCGTGTTCCCGTGTAT
GTACAGTACGTGCAAGCGAGGACAGTTTCAACAGTGCCCCCTTG--TTGTTGCTACTATGTTTTTGACTGTTTTGTGTTG
CTGTTGACGGCGAGCAGATCACATCATGGCCGACGAGTTCTCCGGCGAGCTGTCCGACGGCATGGCCTACGTCGCCGGGC
ACGACGACGAGAACCGCCCCGTCCTGGT---ACGCTCTCTGCAGTTGGGTGTAAATGTTTGGAGCGACACTGGCTTGGCT
CTAACCGTGAGGCTTTTTGTTTTGTTTTCTTGGCAGATGTTCAAAATCAAGCAGGATGACTACCCCAAGTACCAGCCCCA
GAAATC--------------------------------------------------------------------------
-----------------GTTCGTGCGGTTCCTGGTGTTCACGCTGGAGGTGGCGGTGGCGTCCATGAACCGCTTCGTGGA
CGAGTTCGTGCTCCTCTTCGACGCAAGTAAGCAATCTCCGTCT-------------CCGTTGGGTCGATCGGAAGGGAAA
GGGAAGCAGAGGCAGATAGCGCGCGGTAGTGGTCGC-----------ATCGCAATCGCATCCATTTTGACAATGCCCTGC
GACG-GACTGCAAGC-------------GCAGCGCGCACTGACTTAGACGACTGGCACCAGTCG----TCAGTACGCTCT
GCTAGGCGCACATGAATCCCTGGCAGCTCCCAACAACGACAGACACCTTCCCATGGACGGACGGACGGACGGACGGACGC
ACGAACTGCACTGCGCCCGTATCGTGCTGCGACCCTGCTCGCATTGTC-----TCCCACGCACCTTCTTTTTAGGTTTTT
CACTCGTTTGTCTTCCGTATGCATGCTACGTGGGTCAAGCGCGGGCGGGCGGCCGGGCGGTCCCCGGGCTTGACTCGGGC
GGTACCGTTCGCTTTACCGGCCATGATGCCACGCTGCGTGCACAGTTATCGCTGCAGTC---------------------
--------------CGGCCGGCTTCCCGCCGGTGCGGTTTGAATCCTGGCGAGAATGATTGGGTTCCACGCCCGCTTTGC
CCGGCTGCGTGGAAAGCG---------------------------AAGTAGACTACTACTG-TGTGTGCATGGTGGTATG
GGGAGCTGGTCGTTGACGGGACGAATCGGGTTTTCGTGATGCTCGCAGGCTTTTTCCGGTCGGCGTCGGCTTTCCTCAAC
CTGCTGATGGGCACGCTCAAGATCGTCGCCGACTACTACCCCGGCCGCCTCCACCGCGCCTTCGTCATCGACCCGCCCTC
CCTCTTCTCCGTCATGTGGAAGGTAACTAACCGC------------------------------TCGTGATCATGGTGCA
AC-TTCATGTGCGTGGCAATGGCAAGTGGAATTTA---TATGAAAGAAACGTGTGTTTTGCTTTGTGACAGGGGGTGCGG
CCGTTCGTGGACCTGGCGCCGGCGACGGCGGTGGTGAGCTCGCTGGACTTCGAGGACTCGCTGGAGGACGCGTCCTTCAC
GGCCTACCCGCGGACGGCGTCGCTGCGCTTCGAGCCGTCCGTGGCGGCCGCCGTGCTGACGGCGGGGGGGAAGGGGGGAG
C---CGCCGTGGGCTCCGCCTCCTCGCGCTTCGCCTTCAGCGTGTCGGACAACGCGCTCAAGCCGTGGTACCTCTCCACC
ACGCCGGCGCCGGGCCCGCGCTCCGTTGTGCCGGCCTCCTCCAGCCCCTCCCTCGTCGGCGCGTCCCCGCTCTCCGCGCG
CTCCTTCTCCTTCGCCTCGCCCGCCGCGCGCTCCACGCCCACACCCCTCCAGCAGCAGCAGCAGCCGCGCGCCACCCGCG
CGCCGCCGACGCCGTCCGCGGCCAAGGGAGGGCAGAAGGCGCCCTCCCCTCTGCCGCCGACGCCGCCGCAGCAGCAGCAG
CAGTTCCCGCGGACGCCGAGGCCGTCGTTCCTGCAGTCGCCGTTCACGTTCCGCAAGGACGGGCAGGCGAGCCGGGTGGA
GCGGGAGCGCGAGTCCTTCCTGCCCTTCCTGCGCTTCTACCGCCGGCCCTACGACGAGATCACCTACCGCGCCATGATGC
GGCGGCCGCTGGGCGGGCTCATTGCCATCGTCGCCGAGGACTTCAGGCCGATGCCCGCCCAGCCGCCGCTGCGCCGGCAC
GCCGGAGCGCTCCATCACCAGCACCACCACCATCAGCACCAGCACCAGCACCAGAGGATCTGAG----------------
---------------------------------CGTCTTCGATCTCCATACAGCTTACAACATAATCCAATGCTGCATCA
TCTCGCTAAGTCATTAATCTTTTGGCAACATTTTCCCCCGGGTACTTAGTATTTACTCCTACCGACCGCCTATGATATGA
TATCATACCTTCTGAATCCAGCCATTGTAAGATAACAGCCCTGAAATTGTGAGTAAAATCGACCCCTTTCTTTCTGCTCC
CACGGCTTGTTTCTTCCTCCGTGTGATGTGATAGAGTTGC----------------------------------------
-TAGTAAA--------------------------------------------------------TATTTATCAACTTTCA
CTCTTACGTTCTTGGGTAACAAACTTTTCACCAACTTTCTACTCTTACGTTCGCGGTGGACCTGT--AC-GTTGGTCAAA
TGGCGCCATGAGCCAACACATTTGGAGGAAGAAATTAGAAAGTAATGAA--------------------CTTAGTGAGGC
TGTGATGGCATGGCAC--CATGGCCGTTGAAGATTTTGAAACGGCGAGAGGAAAGCAACACGGAGAGTGAGGACGGGTTC
TTCCTTTTCCGTCTTTTGCAGCGACGCTGTCGGCCACCTCGGTAAGCTTCACCAGTAAGCACAACAC-AAGTATGATGAT
TACATGGAGCCTGCCTGCCTACACGTTTGTT----ATACATACGTACGTACG----CGTCCGAGTTCCAA-------TAC
CTTTCGATTTGTTTTCTCCTGCTGCATGCGTAAGTTGGTTCTACTTTGAGGAGACGAGCAGCGTACCACGCAGGGTTGAC
GACGAGCGCTTTAAGCCCTTTTCCCCCCGCAAGAGCTTACAAAAAGCATTAAAGCA------------------------
-----------------------------------------------AACTTTAAAGTTTAAACTTTACAAACTTTACAA
ACTTTAAACTGGCGGTGGTATAAGCATTGGACGCGGTAGCCGGCGTGAGGAGCAGCCCTCTCTTTTCCTCGAGCTCTGGT
AAAGCCAGGAGGAACAGTGGGCATGCATCGCATGAATACTACGATCTTCTTTTGCGGCCGGGTTTTTTGCTTTCGTTGAT
CCATATGCCATATGCAGGATCTGTCCCGGTTCGCGTGGACC
>chr4D_1
AAGCGTATACGCAACGGCTAGACCGGGTCTATCATTAAATGAATAGATTAAATGACGAACGGCTACAATTTTTGATTTCA
AAAATTGAACGCTCCAAGCGCGTGTTGCTAACGCTCTCACGGAGTTTGCTCCTTGTGTTTTGGGATTGACAGCGTCACCG
ACCGTTAGCATCATCTGTACACAATTTTCGATCCCTCGCAGGACAATGACAATGTGCAATTACTACATAGAAATATATTA
TTTTTGTGGTGAAGTACATAGAAAATATTGCCATATTTGAAAATGTAGCAGGTTGTAAACCACAATGGTTGCTCATATTT
TCTCAGTG-----------------------------------GGTTAACTAGGGCAATATATAATGTACCCATAAGCCA
TAACAC-AAAAATGATGAGGTAATTTAGGCACCTGTCATCAT----AAAGGGAGCCAAAGCCCTTTTTCCATCAGCCAAA
AATAGAGCTATAAACCCAGAGATCGACAC--GGCCGTAAAGCACAATCCCATGGGTTATTTAGAGCTATATATAGTAGTG
ATCATCATGACACAGACAATGATGAGATTCAATTCTGAAAACATGGAGAAACTCATCATCAAATCAAAGATAT-AAAAGC
AAAGAAAGGCGTAAAAAGGCGTCTCCCTAATAATCAGACGCGCTCAGCAGTCAGTAAGCAGTGTACACGGACAGTTATTC
GGTGGCAATCGGCCAAGAATACTAGGAGCAAAAGTCGACGACAAACCCACCGGGGGGCGCGCGGGCAAGCAAACAAACGT
CCGTCGCCGTCCCCGTCACCGTCACCGTTTCGCCGTCAGCGCCATTGC-TCGGCCGGGAGCT-CCTTTGGCTTAAACGGC
ACCTTCGCCCCCGCCCACGGCTTATAATACTCCTCCTCCTCCTCGTCTCGTCC---CAGTCCCTGCCTTCTCTCCCAGTG
TCGTTCTCAGCCTCTCAGGCCACCGCCACCCGCTGTCCTCTCTCCCGTAGTTCGTTCGTGCGTCCACACTCGCCCCGCTC
CTCCGTGTCCATCTCCTCTCTCTC----GGCGACATGGCGAAGGTCGCTGCCATGGCCATGGAGAAGGTGGACGCCAAGG
ACCGGGAGAAGATCGAGGCCGTCCGCAAGGTGATGCGCAAGCAGGCGCCGCTCTCCCCCAAGCAGGTATGT----CTCGT
GCCTTCCTCTATCTCTCGGCTGGCGGCCATGCCTTCTTCTTGGATCGCTTTCTTGACGCCGGCTGGCTGGCTGGTTCGCG
G-TCAGGCGGAGTACTGCAACGACGCGTGCGTGGAGCGGTTCCTCCGGGCCAAGGGCGACAACGTGAAGAAGGCGGCCAA
GACCCTGCGGGCCGTCCTCTCCTGGAGGGAGACCATCGGAGCAGGTGCGCTCAGCCCTCC--CCTCTCTCTACCTCCCAC
CTGCTTCCGGCAGCGAGTGTGATTCTCCGGCCTGCTTTTTTT-GAAACCCGTGGGGCATGCAGAAAAGGGGCAGTTCATT
AATACT---ACCACATACGGCGG--TGATGTGCTCTGTTTTTGTTCTGTTCTCATACCTACGGCACAGTGTATTCTAGTC
AGGTTACCTGTAGAACTGTGCGTACAGAATTTATTGTGCCGGGCTCTTTGCTTC-----GCATCCCGTATTCCCGTGTAT
GTGCAGGCAAAGGACA-GT------TTGCAGCAGTGCGCCCGTCCCTTGTTGCTATTATGTTTTGACTG--TTTGTGTTG
TTGACGGG-----GCAGATCACATCATCGCCGACGAGTTCTCCGGCGAGCTGTCCGAAGGCATGGCCTACGTCGCCGGGC
ACGACGACGAGAACCGCCCCGTCCTGGTACCACGCTTACTGCAGTTGGGTATAGACGTTTGGAGCGAGACTGGCTTGGCT
CTGACCGTGAGGATT----TTTGA-TTTCTTGGCAGATGTTCAAAATCAAGCAGGATGACTACCCCAAGTACCAGCCTCA
GAAATC--------------------------------------------------------------------------
-----------------GTTTGTGCGGTTCCTGGTGTTCACGCTGGAGGTGGCGGTGGCGTCCATGAACCGCTTCGTGGA
CCAGTTCGTGCTCCTCTTCGACGCAAGTAAGCAATCTCCGTCCACTCCACTC---------CGCTCGATCAAAAGGGAAA
GGAAAGCAGAGGCAGATAGCGCGCAGTAGTGGTCGCATCGCATTGCAATCGCATCCG-------TTTGACAATGCCCTGC
CCTGCGACTGCAAGCGG----CAGGCAGGCAGTGCGCACTGACCTAGACGACTGGTACCAGTCAATCATCAGTACGCTCT
GAGAGGTGCACATGAATCCCTGCCTGCTCC---CAACGACAAACACCTTCTCATGGACGGACGGACGGACG--------C
ACGAACTGCACTGCGCCCGTATCGTGCTGCGACCCTGCTCCCGTTGTCTCCCATCCCATGCACTTTCT-------TTGTT
CACTCGTTTGTCTTCCGTATGC----TACGTGGGTCAAGCGCGG----------------TCCCCGGGCTTGACTCGGGC
GGTACCGTTGGCTTTACCGGCCATGATGCCACGCTGCGTGCACACTTATCGCTACAGTGCCACTGGGTTGAGGCC-----
-----------------CCGGCTTGCCGCCGGTGCGGTTTGAATCCTGGTGAGAATGATTGGGTTCCACACCCGCTTTGC
CCGGCCGCGTGGAAAGCAAG---GGCCGTAGTAGAATCTGCAGCAAAGTAGACTACTGCTG-TGTCTGTATGGTGGTATG
GGGACCTGGCCGTTGACGGGACGAATCGGATTTTTGTGATGCTCGCAGGCTTTTTCCGGTCGGCGTCGGCTTTCCTCAAC
CTCCTCATGGGCACGCTCAAGATCGTCGCCGACTACTACCCCGGTCGCCTCCACCGCGCCTTCGTCATCGACCCGCCCTC
CCTCTTCTCCGTCATGTGGAAGGTAATAACTAACTGCGTTACACGATCCCTCATGATCATGGCATCATCATCATGCTGCA
TG-CTCTTGTGCGTGGCGAGTGGGATCATGTACGTACGTATGAAAGAACC--GTGTTTTGCTTTGTGACAGGGAGTGCGG
CCGTTCGTGGACCTGGCGCCGGCGACGGCGGTGGTGAGCTCGCTGGACTTCGAGGACTCGCTGGAGGACGCGTCCTTCAC
GGCCTACCCGCGGACGGCGTCGCTGCGCTTCGAGCCGTCCGTGGCGGCCG---TGCTGACGAC---GGGGAAGGGAGGAA
C---CGCCGTGGGCTCCGCCTCGTCGCGCTTCGCCTTCAGCGTGTCGGACAACGCGCTCAAGCCGTGGTACCTCTCCACC
ACGCCGGCGCCGGGCCCGCGCTCCGTCGTGCCGGCCTCCTCCAGCCCGTCCCTCGTCGGCGCGTCCCCGCTCTCCGCGCG
CTCCTTCTCCTTCGCCTCGCCCGCCGCGCGCTCCACGCCGACACCCGTC---CAGC------AGCAGCGCACCGCCCGCG
CGCCGCCGACGCCGTCCGCCGCCAAGGGAGGGCAGAAGACCCCCTCCCCTCTGCC---------------GCAGCAGCAG
CAGTTCCCGCGGACGCCGAGGCCGTCGTTCCTGCAGTCGCCGTTCACGTTCCGCAAGGACGGGCAGGCCAGCCGGGTGGA
GCGCGAGCGCGAGTCCTTCCTGCCCTTCCTGCGCTTCTACCGCCGGCCCTACGACGAGATAACCTACCGCGCCATGATGC
GGCGGCCGCTCGGCGGGCTGATAGCCATCGTCGCCGAGGACTTCAGGCCCATGTCCGCCCAGCAGCCGCTGCGCCGGCAC
GCCGGAGCGCTCCATCACCAGCACCACCACCATCAGCACCAGCACCAGCACCAGAGGATCTGAGCCCGTGCGCTGCCCGC
CGGATTGAAGATTGAACAACCCCAGCGATCGAGCGTCTTCGATCTCCATACAGCTTACAACATAATCCGATGCTACATCA
TCTTGCTAAGTCAATAATCTTTTGGCAACATTTTCCCCCGGGTACTTAGTATTTACTCCTACCGACCGCC-----TATGA
TATCATACCTTCTGAATCGAGCCATTGTAAGATAACAGCCCTGAAATTGTGAGTAAAATCGATCCCTTTA----TGCTCC
TACCGCTTGTTTGTTCCTCCGTGTGATGTGATAGA-TTGCACTAGTGTCAAAAACCTTCTTATATTATGTGACGGAGGGA
GTAGCAAA--------------------------------------------------------TATTTACCAATTTTCA
CTCTTACGTTCTTGGGTAACAAACTTTACACCAACTTTCTACTCT--CGTTCGGGGTGGGCGTCTGCAC-GTTGGTCAAA
CGGCGCCATGAGCCAACACATTTGGAGGAAGAAA-------------------------------CTAGCTTAGTCAGGC
TGTGATGGCATGCCACACCATGGCCGTTGAAAATTTTGAAACTCTGAGACGAAAGCAACATGGAGAGTGAGGACGGGTTC
TTCCTTTTCCGTCTTTTACAGTGACGCTGTCGGCCACCTCGGTAAGCTTCGCCATTAAGCACAACACAAAGT---ATGAT
TACATGGAGCCTGCCT----ACACGTTTGCT----ATACATACGTACGTACGTACGCGTCCGAGTTCCAA-------TAC
CTTTCGATTAGTTTTCTCCTGCTGCATGCGTAAGTTGGTTTTACTTTGAGGAGACGAGCAGCGTACACAGGGTT------
GACGAACGCTTTAAGCCTTTTT---CCCGCAAGAGCTTACAAAAAGCATTAAAGCAGACCATGGAACTGAAGGACGGAGC
GCATCATTTCTTTGCCCCGGCCGTAGACCGCTGAATTTTGAAGTTCAAACTTTAAACTTTAAACT---------------
-------------GGTGGTATAAGCATT----GCGGTAGCCGGCGTGACGAGCAGCCCTCTCTTTTCCTCGAGCTCTGGT
AAAGCCAGG---AACAGTGGGCATGCATCGCATGAATAC---GATCTTCTTTTGCGGCCGGGTTTTGCTTTCA--TTGAT
-------CCATATGCAGGATCTGTCCCGGTTCGCGTGGACC
>chr4B_1
AAGCGTACACGCAACGGCTAGAACGGGTCTATCATTAAATGAATAGATTAAATGACGAACGGCTACAATTTTCGATTTCA
AAAATCGAACGCTCCAAGCGCGTGTTGCTAACGCTCTCACGGAGTTTGCTCCTTGTGTTTTGGGATTGACGGCGTCACCG
ACCGTCAATATCATGTGTGCACAAATTTCGGTCCCTCACAAGCCAGTGACAATGTGTAATTACTACACAGAAATATATTA
TTTTTGTGGTGAAGTACATAGAAAATATTGCCATATTTGAAAATGTAGCATGTTGTAAACCGCAATGGTTGCTCATATTT
TCTCATGGTTAAAACTCAGAGGCGCAATGAAGGAGAAAACGGAGGTTAACTAGGGCAATATATAATGTACCCATAAGCCA
TAACACG-AAAATGACGAGGTAATTTAGGCACCTATTATCAT----GAAGGGAGCAAAAACA-CTTTTTT-TCAGCCGAA
AATAGAGCTATAAACCCAGAGATCGACAC--GGACGTAAAGCACAATCCCATGGTTTATTTAGAGCTATATATAGTAGTG
CTCATCATGACATAGATAATGATGAGATTCAATTCTGAAAACATGGAGAAACTCATCATCAAATCAAAGATAT-AAAAGC
AAAGAAAGGCGTAAAAAGGCGTCTCCCTAATAATCAGACGCACTCAGCAGTCAGTAAGCAGTGTACACGGACAGTTATTC
GGTGGCAATCGGCCAAGAATACTACGAGCAAAAGTCGACGACAAACCCACCGGGGGGCGCGCGGGCAAGCAAACAAACGT
CC------GTCTCCGTCTCCGTCGCCGTTTCACCGTCAGCGCCATTGCCTCGGCCGGGAGCGCCCTTTGGCTTAAACGGC
ACCTTCGCCCCCGCCCACGGCTTATAATACT----CTCCTCCTCCTTGTCTCCTCCCAGTCCCTGCCTTCTCTCCCAGTG
TCGTTCTCAGCCTCTCAGGTCACCGCCACCCGCTGTCCTCTCTCCCGTAGTTCGTTCGTT----CACACTCGCCCCGTTC
CTCCGTGTCCATCTCCTCCCTCTCTCTCGGCGACATGGCGAAGGTCGCTGCCATGGCCATGGAGAAGGTGGACGCCAAGG
ACCGGGAGAAGATCGAGGCCGTCCGCAAGGTGATGCGCAAGCAGGCGCCGCTCTCCCCCAAGCAGGTATGCACCGTACGT
GCCCTCCTCTATCTCTCGG----CGGCCATGCCTTCTTCTTGGATCGTTTTCTTGACGCCGGCTGGCTGGGTTGGTCTGC
GCTCAGGCGGAGTACTGCAACGACGCGTGCGTGGAGCGGTTCCTCCGGGCCAAGGGCGACAACGTGAAGAAGGCGGCCAA
GACCCTGCGGGCCGTCCTGTCGTGGAGGGAGACCATCGGAGCAGGTGCGCTCAGCCCTCC--CCTCTCTCTACCTCCCAC
CTGTTTCCGGCAGCGAGTGTGATTCTCCGGCCTGCTATTTTTTGAAATCCGCGGGACATGCAGGAAAGGGGCAGCTCATT
AATACTTCTACTACATACGGCGCTCAGATGTGCTCTGTTTTTGTTCTGTTCTCGTACCTACGGCACAGTGTATTCTAGTC
AGGTTACTGGTAGAA--GTGCGTATCGAATTTATTGTGCCGGGCTCTTTGCTTC-----GCATCCCGTATTCCCGTGTAT
GTGCAGGCAAAGGACGGGT------TTGCAACAGTGCGCCCTTG--TTGTTGCTATTATGTTTTGACTG--TTTGGGCTG
TT----GG-----GCAGATCACATCATCGCCGACGAGTTCTCCGGCGAGCTGTCCGAAGGCATGGCCTACGTCGCCGGGC
ACGACGACGACAACCGCCCCGTCCTGGT---ACGCTTACTGCAGTTGGGTATAAATGTTTGGAGCGAGACTGGCTTGGCT
CTGACCGTGAGGATT----TTTTGTTTTCTTGGCAGATGTTCAAAATCAAGCAGGATGACTACCCGAAGTACCAGCCTCA
GAAATCGTAAGCACATACTACTCCTACAAGTGTTTCACTACTTGTTGGATTTTAACTAACAGTGCAGAGCATTGCATTGG
TTCTTCTGGCTCTACAGGTTCGTGCGGTTCCTGGTGTTCACGCTGGAGGTGGCGGTGGCGTCCATGAACCGCTTCGTGGA
CCAGTTCGTGCTCCTCTTCGACGCAAGTAAGCAATCCCTTTTCACTCCCCTCTACCCCGTTCGATCGATCGAAAGGGAAA
GGGAAGCAGAGGCAGATAGCGTGCAGTGGTGGTCGC-----------ATCGCATCCG-------TTTGACATTGCCCTGC
GACG-GACTGCAAGCGGCAGGCAGGCAGGCAGTGCGCACTGACTTAGACGACTGGCACCAG----TCATCAGTACGCTCT
GAGAGGAGCACATGAATCCCTGGCTGCTCC---CAACGACAAACACCTTCTCATGGACGGACGGACGAATG--------C
ACGAACTGCACTGCGCCCGTATCGTGCTGCGACCCTGCTCCCGTTGTC-----TCCCATGCACTTTCT-------TTTTT
CACCCGTTTGTCTTCCGTG----TGCTACGTGGGTCAAGCGCGGGCGGGCGG--------TCCCCGGGCTTGACTCA---
------GTTCGCTTTACCGACCATGATGCCACGCTGCGTGCACAGTTATCGCTACAGTCCGGCCCGGCCCGAGCTGTTTG
GGTTTGCGCAGGGTCGGCCGGCTTCCCGCCGGTGCGGTTTGAATCCTGGCGAAAATGATTGGGTTCCGCACTCGCTTTGC
CCAGCTGCGTGGAAAGCAAGGGCGGCCGTAGTAGAATCTGCAGCAAAGTAGACTACTGTGTCTGTCTGTATGGTGGTATG
GGGACCTGGTCGTTGACGGGACGAATCGGATTTTTGTGATGCTCGCAGGCTTTTTCCGGTCGGCGTCGGCTTTCCTCAAC
CTCTTGATGGGCACGCTCAAGATCGTCGCCGACTACTACCCCGGCCGCCTCCACCGCGCCTTCGTCACCGACCCGCCATC
CCTCTTCTCCGTCATGTGGAAGGTAATAACTAACTGCATTACATGATCCCTCATGATCATGGCATCATTATGCAGCATGT
ACTCTCTTGTGAGTGGCAAGTGGAATCATGTACGT----ATGAAAGAACC--GTCTTGTGATTTGCAACAGGGAGTGCGC
CCGTTCGTGGACCTGGCGCCGGCGACGGCGGTGGTGAGCTCGCTGGACTTCGAGGACTCGCTGGAGGACGCGTCCTTCAC
GGCCTACCCGCGGACGGCGTCGCTGCGGTTCGAGCCCTCCGTGGCGGCCG---TGCTGACGGC---GGGGGGGAAGGCGG
CCGGCGCCGTGGGCTCCGCCTCGTCGCGCTTCGCCTTCAGCGTGTCGGACAACGCGCTCAAGCCGTGGTACCTCTCCACC
ACGCCGGCGCCGGGCCCGCGCTCCGTCGTGCCGGCCTCCTCCAGCCCATCCCTCGTCGGCGCGTCCCCGCTCTCCGCGCG
CTCCTTCTCCTTTGCCTCGCCCGCCGCGCGCTCCACGCCGACACCCGTC---CAGCAGCAGCAGCCGCGCGCAGCCCGCG
CGCCGCCGACGCCGTCCGCGGCCAAGGGAGGACAGAAGACGCCCTCTCCTCT---------GCCGCCGCAGCAGCAGCAG
CAGTTCCCGCGGACGCCGAGGCCGTCGTTCCTGCAGTCGCCGTTCACGTTCCGCAAGGACGGGCAGGCCAGCCGGGTGGA
GCGGGAGCGCGAGTCCTTCCTGCCCTTCCTGCGCTTCTACCGCCGGCCATACGACGAGATAACCTACCGCGCCATGATGC
GGCGGCCGCTCGGCGGGCTCATAGCCATCGTCGCCGAGGACTTCAGGCCCATGTCCGCCCAGCAGCCGCTGCGCCGGCAC
GCCGGAGCGCTCCATCACCAGCACCACCACCAT------CAGCACCAGCACCAGAGGATCTGAGCCCGTGCGCTGCCCGC
CGGATTGAAGATTGAACAACCCAAGCGATCGAGCGTCTTCGATCTCCATACAGCTTACAACATAATCCAATGCTA---CA
TCTTGCTAAGTCAATAATCTTTTGGCAACATTTTCCCCCGGGTACTTAGTATTTACTCCTACCG----CC-----TATGA
TATGATACCTTCTGAATCGAGCCATTGTAAGATAACAGCCCTGAAATTGTGAGTAAAATCGATCCCTTTCTTTCTGCTCC
CACCGCTTGTTTGTTCCTCCGTGTGATTTGATAGA-TTGC----------------------------------------
-TAGTAAATACTCCCTCCGTAAACTAATATAAGAGTGTTTAGATCACTAAGTTTACAGAGGGAGTATTTACCAACTTTCA
CTCTTACGTTCTT-GGTAACAAACTTTTCACCAACTTTTTACTCTTACGTTCGGGGCGGACGTCTGCATGGTTGGTCAAA
CGGTGCCATGAGCCAACACATTTGGAGGAAGAAACTGATGAACGGGTGCCATGCATGACTCGCTGCTAGCTTAGTCAGGC
TGTGATGGCATGCCACACCGTGGCCGTTGAAATTTTTGAAACGCCGAGACGAAAGCAACACGGAGAGTGAGGACGGGTTC
TTCCTTTTCCGTCTTTTACAGTGACGCTGTCGGCCACCTCGGTAAGCTTCACCATTAAGCACAACAC-AAGT---ATGAT
TACATGGAGCCTGCCTGTCTGCTTACATCGTATGCATACATACGTACGTACGTACGCGTCCGAGTTCCAAATTCCAATAC
CTTTCGATTTGTTTTCTCCTGCTGCATGCGTAAGTTGGTTTTACTTTGAGGAGATGAGCAGCGTACGCAGGGTT------
GACGAACGCTTTAAGCCTTTTT---CCCGCAAGAGCTTACAAAAAGCATTAAAGCAGACCATGGAACTGAACAACGGAGC
GCATCATTTCTTTGCCCCGGCCGTAGACCGCTGAATTTTGAAGTTCAAACTTTAAACTTTAAACT---------------
-------------GGTAGTATAAGCATT----GCGGTAGCCGGCGTGACGAGCAGCCCTCT--TTTCCTCGAGCTCTGGT
AAAGCCAGG---AACAGTGGGCATGCATCGCATGAATAC---GATCTTCTTTTGCGGCCGGGTTTG-TGCTTTCGTTGAT
-------CCATATGCAGGATCTGTCCCGGTTCGCGTGGACC
>SNPs
-----------------S-----------------------------S--------------------------------
---------------S----------------------------------------------------------------
------S---SS--------------SS-S-----------------------------------S---S----------
----------------------------S----------------S----------------------------------
----S---------------------------------------------------------------------------
------S--------------------------------S--SSSS--S---S---------------------------
-------------------S---S-----SS-------------------------------------------------
-------------------------------------------------------------------------S------
----------------S----------------------------S-S-SS----SS-------S--------------S
----S-----------------S---------------------S----------------------------------S
--------------------S---------------------------------------------S-------------
----------------S------------------------------------SSS--------S---S--SSS-S----
----------------------------------------------------S---------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-------S---
----S----S-------S----------------S--------SSSSS---------------S----------------
--S-----------------------------------------------------------------------------
---------S---------------------------------------S--S--SSS--SS--S-S-----S-----S-
S---------------S-----------------------------------S-S-----------------S-------
------S--------------------------------------S----------------------------------
-----------------------------------------------------SSSSSS---------S-----------
--S---SSSSS-S-S-S-SSSSSSS--S---------S-----------------S--------SSSSSSS---------
S--SS-SSSSSSS--------------S-----------------------------S----------------------
------------------------------------SS------------S----------------S------------
--S---------S--SSSS----------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-S----------------------------------------S------------------S-S-------S--------
------------------------S----------------------------SS--SSSSSSS----------------
--------------------------------S------------------------------S----------------
-SS---S-----------------S-----SSS--------S--------S--------------------SSSSSSSS-
----------------------------------------S-S---------------S----S----SSSSSSS-----
----------------------S-----------------------------SSSSSSSS--------------------
-----------------------------------------------------S--------------------------
---------------------------------------------------------------------S----------
-----------------S---------------------------------------S-------S--S-----------
----S------------------------S----S---------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------SS-SSSS---------------------------------S-S------S----
---S--S------------SS-S--SSSSSSSSSS-------------S-SS---------------------S------
--------------------------------------------------------------------------------
--------------------------------------------------SSS----------SSS--------------
----------------------S---------------------------------------------------------
--------------------------S--------------------S--------------------------------
---------------------------------------S------S--SSS---------------------S------
--------------------------------------S----------------SSSSSS-------------------
--------------------------------------------------------------------S-----------
------------------------------------------------------------S-------------------
----------S-----------S--------------------------S---S---------S----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---S---------S--------------------------------------------------------SSSSS-----
------------------S-------------------------------------------S-----------------
---S--------S----------------------S--------------------------------------------
----------------------------------------------------------------------S---------
-----------------------------------------------------S-------S-S----------------
S---------------------------------S-SSSS-SSSSSSSS--------------------------S----
------------S------------------S-----------S-----S------------------------------
-----------------S---S--------------------------------S-----------------SSS-----
-----------------S-----------S--------------------------------------------------
----------------------------------------S-------------------------SSS-SSSSSSSSSS
-----S-----------S----SSS-------------------------------------------------------
--------------------------------------------------------S--------SSSSSSSSSSSSSSS
SSSSSSSSSSSSS---------------SSSS----------------S-------------------------------
---------SSS---------------------------SSS------------------------S-------------
SSSSSSS----------------------------------
>forward_936
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCCTCCTCGTCGTCTCCATT------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_3073
--------------------------------------------------------------------------------
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--------------------------------GCTCGTGATCATGGTGCAAC----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>forward_2222
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------AGCAATCTCCGTCTCCGTTG------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------
>reverse_4223
--------------------------------------------------------------------------------
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--------------------------------------------------------------CCCCTTTCTTTCTGCTCC
CA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
