>input_sequence_29651
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---------------------------------------------------------ATGAATTCCAGCCGGAGCCTGCT
CTCGTCGCCGCTCTTCCCCACCTCCTCTCCAAACTTCAGG---------TCCTCCCCATCCCCCTCCCGCACCTCAGGTA
CATCATCTA------------CTCATACATACTACTCTAGTTACTACAACCTCCCCTTCTTTCTGCATCTGA------TA
GGCCTGAAGCTCATCTG-GTTTGGGCAGTTCCGATGATACATGACAGCACCGGCGGCCGGGCATCCACCGCCTGCCACTA
CTCGCCATCGCTGGTGGCCGAGGAGCAGCAAGCCCACAGCTCCGTATCCCTCAAGGGCGAAAAGGCCTTGCTGGAGTTCC
TGCTGGACATGGTTGGTTGCCTGCCCATCCAACACTTGCTTTCATCTTCAGTCTCTCCTTTTATAAAAGCCTTCTCTTCA
ATATGCCATCTTGTCTTGCGGCGCTCTATCCTTCCAACCGAGCCTGTGCTCGGGGAGCACTCCTTGGGCCAGTTCTTTTC
GGCGATTCGCCCCCCTCTCCAGCTTCTCCCAGAATCACCACTCCATGTGTTTTTTACAATCCTAGCTACTTATGATTGTA
TCATTCATAAACTCTAGACAGATCATTT-----ATTTACATGGTCTT----------------------ACTCTGCATCA
C------TGTTATTGCTGATTGATTCTGTATTATTATCTGTTTCACCAC-AGGCTTTGGAGCAGCACACAGAAGGGAAGA
GCCTCACCGGCCAAGATGGGGCGGAGGGCGAGTTCGAGAGCTATTTGCGGGGCCTGCAGCGCCAAGTCATTTACCAGCAG
GCGTTTGGGTAATCAA----AGTCCCTGTTTCTGTTTCCCTGCGCAAACTGATTGATTTGCTACTTATTCTGACCTCAAC
TGAACCACATTTGATTGGCAGTGAAAAGAACAACTTTACTTGTGCAATCACTTCAACTTCAACGCCGTCAGCGAAATCAG
TTTCAAGTTTGGATCTTAATGCAACCTCGGCGACCTTGATGAAGGAGGTGGCATTTTTAGCACATGGATCAGGCACTTCA
GCCACCCAGCTGAATGTACCGCCAC---CGGTTACAACAAGTGTGGAGACCAACCACCTGCATGAGAAACTGCTCAGCAA
TGGGCAAGTGTTCATTCGGTCTACACGGTTGCTCGAGAGAAGATCGAAGAAACGCAATGTTCCTCGAGCATCAACAAGCA
GCACTGATGTTGTCCAGTGCGGTGTCGCCGACTCGAAGAAGAAAGACAGACCAAAGAAGTATGGCCGGGTTCTCGGTCCA
GATGAACCCTTCAGGTTGTTCCTACGAGACCGCGAGACGACAGAGTTCTTGACGGCAAAGGAAGAGAGGCACTTGTTCAG
TCAGATACAGGCATGTTCTTTTTTCCTTGTACAACACCTTGTACCACTGTATCCTTGTGTCCTTGATGCCCAGATCAAA-
--AGATATTTCAGCTTTGCTAATTCGAAGAC---------TTCCATGTGCAGAATCTTATGAAACTGGAGGAGGCTCAGC
GTAGGCTAGAAGCGCAATGTGGCCGCGAGCCGACGCTTCCCGAGTGGGCTCAGGCCGTAGGAATGAGCTGCAAGGAACTG
CAGTCGTCCATACACATCGGAAGGCGCTGCAGGGAGAAGATGGCCCGCTCCAACTTCCGCCTTGTCATACACGTAGCTAG
GAAATACCAGGGATATGGCCTTGACATTGAGGACCTAGTTCAGGTTAATTTCACTCTT-ACATTTTTTTTTTCTTTTCCG
GAAAGGAGGATCAACTCATTACTGCAAAACCAGGGATATGCATGCCAATATCCTGTTGTAAATGTTTCTTTCCTGTTCTT
GCTTTCAGGACGGATGCTGTGGGTTGATGAAGACCTTCGAGAAATTCAATCCAAGCAAGGGATGCAGGTTCCCGACGTAC
GCGTACTGGTGGATACGCCAAGCAATCAAAAAGTCCATCTTCAAGCATTCGAGACTGATTCGGTTGCCGGTATGAC----
-----------CTTGATATTCTAGTCCTACAATCCATGTTTTGAGAGGGGACAGGTTCATTTTAGTTTGGCATGACTAAC
TCCTGAAAATTACAGACTTCCCGATGCAATGGTGTGACCTTGT--TTTCCTGTGCAGGAGAGTGTGTATGCACGTCTGAA
AAAGGTGGGGAAAGCGAGGCTCGAGTGCATCTTGGAAGGGGAGCAGCCTACTAACCAAAATGTAGCTAGGCGTGCCGGCA
TCACGATCGAGAAGCTGGCGAAACTCAAAGCGAAGACCAGAAAGCCACGATCAATGCAGGATCAAGTCTGGTCCAACGAC
GCAGTCACCTTCCAGGTACTAGCA----------------------------------ACAAAACACTGCGTATAAAACA
TATACTGTAGATCG----------------------------TTCTCGCCGGTCAAATAAGCAAGAACTGAGCTGTAACA
ATTTATGAAC--------GCTGCAGGAGATCACGGAGGACCCGAACATCGACCCACCGGACCTGGTGGTGGACAGGATAA
TGATGAGGCAGCAGGTGCGGGAGTTCCTGGGCATCCTGAGCACGAGGGAGAAGGAGATCATCGAGCACCGCTTCGGGATC
TACGACGGCGAGCCCAAGACGCTCCACGTGATCGGCGACATGTACGGCCTGTCCAAGGAGCGGATCCGGCAGCTCCAGAA
CCGGGCGCTGGACAAGCTGAAGCGGAGCGTGTCCACGCAGGGGTTCGACGTCTACTTGGACCTGCTGACCTCGAGTG---
-GCTAG--------------------------------------------------------------------------
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-------------------------------------------------
>chr4A_1_TraesCS4A01G315700
ATGTCTGAATTGTTTGTTAAACTGCGATTTATTTTGCTTTGTTACATTGTTGAATTGTGATGAGTCTGTGTTATATGATG
GACGTGTATGAATTGCATTGATTTGATTTGAGGAGCGTGGCTGCCCGGCAGGACATTTGAGGAACTGTCCGCTGACGTTT
AGGGGGCGTCTGCGTGTTGATGCTCTCAACTCTTGGCAAAGCAAAGAGTATGTTCCTTGCGCCGCCGGTGGTCCTGACTG
CCCTGCACCTCCGCGACGGCGCTCGTCGCCGGCGTGCACCGGCGCCGTGAACCTCAGCGACTGGCTCGCGGGCAGCGACC
CGGGCTGC---ATTAAAGAGCCAAGAATCGGTCAGGTTCAGGCCGTGATCTCGCCGAGCAGCGGCGCGTGCCCGCAGGGT
GTTGGGCGGAATGCCCGCCTGGAGCTCCACATAGATCGAGGTCGCCGCCGGCCGG--TTGGACGAGTGGGACCGCGAGGC
CGGCAAGGCGCATCCCGCCGCCGGCGGATCCAACTTTCATTCAGGTCAAGTAAAAAAAAGTGTCTCCGGTCCTTTTTACT
CTGCATATTAGATTTGTCCGAAGTCAATCTCATTCAACTTTGACCAAGCTTATATACATGTGGATTTGCACACGTGTGGA
TCTGCGGGTCCAGCTTGGCAGCAAAATCCATGGTGCTGCTTGCGCGCCTTATCCTCTCTCGCTCTCGCTCGCTCGCTCGC
TACAGCAGCCTCCACTCCTCTCCCCTCCCTCCATAACCATA------------TCACTCGCTCAATCAATCGGCTGCTGT
TGCTCACTGCTCTGCTCAGCTCAGCTGGAGTAAAATGTGAAGG-------------------------------------
-----------GATCCCTGATCGAGCGAACAAGATCTGCCTCACCAATCAAAGAGCATAGGTAGCTGACCTCTGATGAAA
ACGGATAGGAGAGGAGGAGGAGGGCACT---ACTGAACCAGACAAACTGTGTTCAGCTGCCTCCTTGGTGCCTGTGAGCT
GCTGCTGCTCA-----------------------------CTTCTTCTTCCCCGGACATGAATTCCAGCCGGAGCCTGCT
CTCGTCGCCGCTCTTCCCCACCTCCTCTCCAAACTTCAGG---------TCCTCCCCATCCCCCTCCCGCACCTCAGGTA
CATCATCTA------------CTCATACATACTACTCTAGTTACTACAACCTCCCCTTCTTTCTGCATCTGA------TA
GGCCTGAAGCTCATCTG-GTTTGGGCAGTTCCGATGATACATGACAGCACCGGCGGCCGGGCATCCACCGCCTGCCACTA
CTCGCCATCGCTGGTGGCCGAGGAGCAGCAAGCCCACAGCTCCGTATCCCTCAAGGGCGAAAAGGCCTTGCTGGAGTTCC
TGCTGGACATGGTTGGTTGCCTGCCCATCCAACACTTGCTTTCATCTTCAGTCTCTCCTTTTATAAAAGCCTTCTCTTCA
ATATGCCATCTTGTCTTGCGGCGCTCTATCCTTCCAACCGAGCCTGTGCTCGGGGAGCACTCCTTGGGCCAGTTCTTTTC
GGCGATTCGCCCCCCTCTCCAGCTTCTCCCAGAATCACCACTCCATGTGTTTTTTACAATCCTAGCTACTTATGATTGTA
TCATTCATAAACTCTAGACAGATCATTT-----ATTTACATGGTCTT----------------------ACTCTGCATCA
C------TGTTATTGCTGATTGATTCTGTATTATTATCTGTTTCACCAC-AGGCTTTGGAGCAGCACACAGAAGGGAAGA
GCCTCACCGGCCAAGATGGGGCGGAGGGCGAGTTCGAGAGCTATTTGCGGGGCCTGCAGCGCCAAGTCATTTACCAGCAG
GCGTTTGGGTAATCAA----AGTCCCTGTTTCTGTTTCCCTGCGCAAACTGATTGATTTGCTACTTATTCTGACCTCAAC
TGAACCACATTTGATTGGCAGTGAAAAGAACAACTTTACTTGTGCAATCACTTCAACTTCAACGCCGTCAGCGAAATCAG
TTTCAAGTTTGGATCTTAATGCAACCTCGGCGACCTTGATGAAGGAGGTGGCATTTTTAGCACATGGATCAGGCACTTCA
GCCACCCAGCTGAATGTACCGCCAC---CGGTTACAACAAGTGTGGAGACCAACCACCTGCATGAGAAACTGCTCAGCAA
TGGGCAAGTGTTCATTCGGTCTACACGGTTGCTCGAGAGAAGATCGAAGAAACGCAATGTTCCTCGAGCATCAACAAGCA
GCACTGATGTTGTCCAGTGCGGTGTCGCCGACTCGAAGAAGAAAGACAGACCAAAGAAGTATGGCCGGGTTCTCGGTCCA
GATGAACCCTTCAGGTTGTTCCTACGAGACCGCGAGACGACAGAGTTCTTGACGGCAAAGGAAGAGAGGCACTTGTTCAG
TCAGATACAGGCATGTTCTTTTTTCCTTGTACAACACCTTGTACCACTGTATCCTTGTGTCCTTGATGCCCAGATCAAA-
--AGATATTTCAGCTTTGCTAATTCGAAGAC---------TTCCATGTGCAGAATCTTATGAAACTGGAGGAGGCTCAGC
GTAGGCTAGAAGCGCAATGTGGCCGCGAGCCGACGCTTCCCGAGTGGGCTCAGGCCGTAGGAATGAGCTGCAAGGAACTG
CAGTCGTCCATACACATCGGAAGGCGCTGCAGGGAGAAGATGGCCCGCTCCAACTTCCGCCTTGTCATACACGTAGCTAG
GAAATACCAGGGATATGGCCTTGACATTGAGGACCTAGTTCAGGTTAATTTCACTCTT-ACATTTTTTTTTTCTTTTCCG
GAAAGGAGGATCAACTCATTACTGCAAAACCAGGGATATGCATGCCAATATCCTGTTGTAAATGTTTCTTTCCTGTTCTT
GCTTTCAGGACGGATGCTGTGGGTTGATGAAGACCTTCGAGAAATTCAATCCAAGCAAGGGATGCAGGTTCCCGACGTAC
GCGTACTGGTGGATACGCCAAGCAATCAAAAAGTCCATCTTCAAGCATTCGAGACTGATTCGGTTGCCGGTATGAC----
-----------CTTGATATTCTAGTCCTACAATCCATGTTTTGAGAGGGGACAGGTTCATTTTAGTTTGGCATGACTAAC
TCCTGAAAATTACAGACTTCCCGATGCAATGGTGTGACCTTGT--TTTCCTGTGCAGGAGAGTGTGTATGCACGTCTGAA
AAAGGTGGGGAAAGCGAGGCTCGAGTGCATCTTGGAAGGGGAGCAGCCTACTAACCAAAATGTAGCTAGGCGTGCCGGCA
TCACGATCGAGAAGCTGGCGAAACTCAAAGCGAAGACCAGAAAGCCACGATCAATGCAGGATCAAGTCTGGTCCAACGAC
GCAGTCACCTTCCAGGTACTAGCA----------------------------------ACAAAACACTGCGTATAAAACA
TATACTGTAGATCG----------------------------TTCTCGCCGGTCAAATAAGCAAGAACTGAGCTGTAACA
ATTTATGAAC--------GCTGCAGGAGATCACGGAGGACCCGAACATCGACCCACCGGACCTGGTGGTGGACAGGATAA
TGATGAGGCAGCAGGTGCGGGAGTTCCTGGGCATCCTGAGCACGAGGGAGAAGGAGATCATCGAGCACCGCTTCGGGATC
TACGACGGCGAGCCCAAGACGCTCCACGTGATCGGCGACATGTACGGCCTGTCCAAGGAGCGGATCCGGCAGCTCCAGAA
CCGGGCGCTGGACAAGCTGAAGCGGAGCGTGTCCACGCAGGGGTTCGACGTCTACTTGGACCTGCTGACCTCGAGTG---
-GCTAGGCAGCGCCTCATTTTCTCTCGGTTCGATTGTT----CATACACAAGGGAACACACATGT----ATGTATGTATG
TA----GCCTAAGAAGCTAGAACCCCACTGACA----------TCC----TAGAACTGAAGCAGAGAAACACACAG-CAC
ACTTTCAGAGTTTCAGTGGCATGCTTTTTTGCCGGGT----GTAAGTACAAATTTCGCAGCAAAGC----TGGTGGTACA
TACTACATACATACTGATACTGCAATTGGTTTCTTGCAACCA--------------------------------------
-----------------------------------------------------------------AGGACTTGGCTG---
---------AATCTGTTGAGTTGTGCACA----CTACCTGTGAGTGGCTAGATACAGCCTTT-GTCTTTTGAAG------
--------------------------------------TCAAATGACACACTTTGACC-TTTCAGTCTTTGTGTGTCTCA
GTCAAATGA---------CACACCTGCTACGGTTGGGGCCACGTTGAT--------------------------------
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--------------------------------------------------------------------------TAGATT
TCTAGAGGATTTTC--TTTTCCTATTAAGTCTGTTTGATTTGTAGAATTGGAATCCTTAGGGAAATCTCAGGCTGCTGCT
TTGCACTCCATTTGAAGGG-AAATTTGCATCTACTCAAACCTCCTTTTTTACAATTT-CTTTGTTTTTCTTGTGACATCA
AACACTGTGTAATCCTATAATATTCAAGTGAAGATGCCTTTCTAATACTGTCTTTTTTTTTCTATTCCCGCGAATCAAAT
CTTACCGTGGCGTCTGTGGATGTGCCCTCAGACATCCGAAGGTACTTGTCCCATGAATCTGCAGTCTTGCCATATGCAAG
CATTCGCAAAGCAGCCATGCAATTTTTGGTAATGGGATAATCCAATTCTTTTAAGGGCATCCTTCTTCAAGATGAAGTAG
TCATCGTAGGTCTTGATG-CATTGTAGAGAAGTTCAAACATATTTTTCGTCATCTGAAAGCGCCGGCGAAAATTATCCGC
AAATAGGGCAT--GGAGGCAAAGTAGTCGTCCCTCAGCGTCAAATGTCCCCATGCCCTGTTTCGATTCAGCACTTGATCA
CCTTCATCAATCCCTGGAAACTGAGAACATGCTCTTCTGCATGCCTGC-
>chr5B_198
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-------------------------------------AAAGCAAAGAA---GTTCCTTGCGCCGCCGGTGGTCCACACTG
CTGCGCGCCTCCGCGACGGC-CTCGTCGCCGGCGTGCATCGGCGGCGTGAACCTCAGCGACTGGCTCGCGGGCAGCGCTC
CGGGCTGCATTATTAAAGAGCCAAGAATCGGTCAGC-TCAGGCCGTAATCTCGTCGACCAGCGTTGCGTGCCCGCAGGGT
GTTCGGCGGAATGCCCACCTCGAGCTCCACCGAGGTCGAGGTCGCCACCGG------TTGGACGACCGGGACCGCGAGCC
CGGCGAGGCGCATCCCGCCGCCGGCGGATCCAACCTTCATTCAGGTAAAGTAAAAAA---GTTGCTATTTTGAGGATAAT
CACTACAAGGAAATCAAGC-------------------------------------------GATTTGCACACGTGTGGA
TCTGCGGGTCCGGCTTGGCAGCAAAATCCATGGTGCTGGTTGCGCGCCTTATCCT------CTCTCGCTCGCTCGCTCGC
TACAGCAGCCTCCACTCCTCTCCCCTCCCTCCATAACCATA------------TCACTC----AATCAATCGGCCGCTGT
TGCTCACTGCTCTGCTCAGCTGGAGTAGGAGCATGGGAAGTAGTCTAGCCTCTAGGTAGGTGGTAAAGAGGGAGAGGGAA
TCATCATCGCTGATCCCTCATCTAGTGAACACCATCTCCCTCACCAATCAAAAC-------------ACCTCTGATGAAA
ACGGATAGGACAGGAGGAGGAGGAGGAGGACACTGAACCAGACAGACACCAAGCTCTGCTCA--------CCTGTGAGCT
GCTGCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCGGACATGAATTCCAGCCGGAGCTTGCT
CTCGTCGCCGCTCTTCCCCACCTCATCTCCAAACTTCAGGGGCGCCGCCTCCTCCCCATCCCCCTCCCGCGCATCAGGTA
TCTTCAGTACTGGGTATCTTACTGCTACAAACTTTCCTCGCCTCT--------CCTTTCTTTCTGGTATCTGTTGGCCTA
GGCCTGAGGCTCATCTGTTTTTGTGCAGTTCCGATGATACACGACAGCACCGGCGGCAGAGCATCCACGGCGTGCCACTA
CTCGCCCTCGCTCGTGGCCG---AGGAGCAGGCCCATGGCTCCGTGTCTTTGAAGGGCGAGAAGGCCTTGCTGGAGTTCC
TGCTGGACATGGTTGGTT-----------CCTCCTTTCATGTGTGGTCAAGAGCTCCTGATGGCTA--------------
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--------AAAATATAGAAACACCATTCTCTTCATTTAAATAAATAGTAAATGAATACTTCTACACTGGACTCTGTCCCA
T------TGCTAGTGCTAATAAATTCTGTCTTGTCTGTCTCAACTAATTAAGGCCTTGGAGCAGCACACGGAAGGGAAGA
CTTTCAAAGCCGAAGAGGGGGCAGAGGGCGAGTTCGAGAGCTATCTGCGAGGCCTGCAGCGGCAAGTCATTTACCAGCAG
GCCTTTGGGTAATCAA----AGTCCCTGTTTCTGCTTACTTGCGCAAATTGATTGGTTTGCTGCTTATTCTGACATTAAC
TGAATCACATTTGATTGGCAGTGAAAAGAACAACTTCACCTCTGCAATCACTTCAACTTCAACGCCATCGGCAAAATCAG
TTCCAACTTTGGATCTCGGCGCAACCTCGGTGACCTTGATGAAGGAGGTGGCCTTTTTGGCAGATGGATCAAGACCTTCA
ACCACCCAGCTGAATGTACCACCAGTAACGCTTGCAACCAGTGTGGAGTCGACCCACCCGTACGAGAAGCTGCTGAGCAA
TGGGCAAGTGTTTATTCGGTCTACACGGTTGCTTGAGAGAAGATCCAAGAAGCGGAATGTTCCTCAGGCATCAACAAGCA
GTACTGATGTTGTGCAGTGCAGTGTTGCTGATTCAAAGAAGAAAGAGAAGCCAAAGAAGTATGGCAGGGTTCTCGGTCCA
GATGAACCCTTCAGGTTGTTCCTACGAGACCGCGAGACGACAGAGTTCTTGACGGCAAAGGAAGAGAGACACTTGTTCAG
CCAGATACAGGCATGTTCTTTTTTCCTTGTACAACACCTTGTAACATTGTATCCTTGTGTCCTTGATGCCCAGATCAAA-
--AGATAGTTCAGCTTTGCTAATACGAAGATACGATGACTTTCCATGCACAGAATCTTATGAAACTGGAGGAGGCTCAGC
GTAGGCTAGAAGCGCAGTGTGGCCGCGAGCCGACGCTTCCCGAGTGGGCTCAGGCCGTGGGAATGAGCTGCAAGGAGCTG
CAGTCGTCCATACACATCGGAAGGCGCTGCAGGGAGAAGATGGCCCGCTCCAACTTCCGCCTTGTGATACACGTAGCTAG
GAAATACCAGGGATATGGCCTTGACATCGAGGACCTAGTTCAGGTTAATTTTACTCTTTACATTTTTCTTTTCTTTTCCG
GAAAGGAGGATCAACTCATGGCTGCAAAACCAGGGATATCCTGTC---------GTTGTAAATGTTTCTTTCCTGTTCTT
GCTTCCAGGACGGATGCTGTGGGTTGATGAAGACCTTCGAGAAATTCAATCCAAGCAAGGGATGCAGGTTCCCGACGTAT
GCGTACTGGTGGATACGCCAAGCAATCAAAAAGTCTATCTTCAAGCATTCGAGACTGATTCGGTTGCCGGTATGACCTGA
ACTCAGTTCACCTTGATCTTCTAGTCCTACAATCCATGTTTC-AGAGGGGACAGGTTCATTTTATTTTGGCATGACTAAT
TCCTAAAAATTATAGATTTTCCAATGTAATGGTGTGACATTGT--TTTCTTGTGCAGGAGAGTGTGTATGCACGTCTGAA
AAAGGTGGGGAAAGCAAGGCTGGAGTGCATCTTGGAAGGGGAGCAGCCTACTAACCAAAATGTAGCTAGGCGTGCCGGCA
TCACGATCGAGAAGCTGGCGAAACTCAAAGCAAAGACCAGAAAGCCACGATCAATGCAGGATCAAGTTTGGTCCAACGAC
GCAGTCACCTTCCAGGTACTAGCATTCATTCCCAATGATCTTTGCAACACACCAGTGAACAAAACACTATGTATAGAACA
TACTGTAGATTGTTCCAGGACTGAATCGATTGAGCTGTGATCTTTTCGCCGGTCAAATAAACAAAAGCTGAGCTGTAATA
ATTTATGAAC--------GCCGTAGGAGATCACGGAGGACCCGAACATCGATCCACCGGACCTGGTGGTGGACAGGATAA
TGATGAGGCAGCAGGTGCGGGAGTTCCTGGGCGTCCTGACCACGAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATC
TACGACGGCGAGCCCAAGACGCTCCACGTGATCGGGGACATGTACGGCCTGTCCAAGGAGCGGATCCGGCAGCTCCAGAA
CCGGGCGCTGGACAAGCTGAAGCGGAGCGTGTCCACGCAGGGGTTCGACGTCTACTTGGACCTGCTGACCTCGAATG---
-GCTAGGCAGCGCCTCATTCATTCTCGGTTCCATTGTT----CATACAGAAGGGAACACACATGTATGTATGTATGTATG
TA----GCCTAAGAAGCTAGAACCCCACTGACATGTGCAAGCCTCC----TAGAACTGAAGCAGAGAAACACACAG-CAC
ACTTTCAGAGTTTCAGTGGCATGCTTTTTTGCAGGGT----GTAAGT--AAATTTCGCAGCAAAGC----TGGTGGTACA
TACTC-----------ATACTGCAATTGATTTCTTGCAACCA--------------------------------------
-----------------------------------------------------------------AGGACTTGGACTGCA
GCCAAGTGAAATCTGTTGAGTGTGCACACTACTCTACCTGTGAGTGGCTAGATACAGCCTTT-GTCTTTTGAAGGTGGCA
GCTCATCATACCCATGATAGGACCATCACTGTGTTTTGTCAAATGACACACTTTGACC-TTTCAGTCTTTGTGTGTCTTA
GGATTCCTTTGATCCCTAGAGGA---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------TTCAATTTTTCCTATATTGTCTGTTTGATTTGTAGGATTGGAATCCTTAGGGAAATCTTAGACAGCTGCT
TTGCACTCCATTTTGAATAAAAATTTCCA--CACTCAAACCTCCTTTTTTATGGTTG-CTTTGCTTTTCTTGTGGCATCA
AACACTCTCTAATCCTATAA------------------------------------------------------------
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-------------------------------------------------
>chr5D_210
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------ATGTTCCTTGCGCCGGCGGTGGTCCCAACTG
CCGTGCATCTCCGCGACGGC-CTCGTCGCCGACGTGCACCGGCGCCGTGAACCTCAGCGACTGGCCCGCGGGCAGCAATC
CGGGCTGCATTATTAAAGAGCCAAGAATCGGTCAGC-TCAGGCCGTGATCTCGTCGACCAGCGGTGCGTGCCCGCAGGGT
GTTGGGCGGAATGCCCACCTCGAGCTCCACCGTGGTCGAGGTCGCCGGCGGTTGGACTTGGACGAGCGGGAGCGCGAGCC
CTTCCAAGGATAATT------------------------TTCAGGTAAAGTAAAAAAAAGGTTGCTATTTTGAGGGAGGA
TAATTCCAAGGAATCAAGC-------------------------------------------GATTTGCACACGTGTCGA
TCTGCGGGTCCGGCTTGGCAGCAAAATCCATGGTGCAGCGCGCGCGCCTTATCCTC----------GCTCGCTCGCTCGC
TACAGCAGCCTCCACTCCTCTCCCCTCTCTCCATAACCATATCACTCACTGTCTCACTC----AATCAGTCGGCCGCTGT
TGCTCCCTGCTCTGCTCTGCTGGAGTAGGAGCATGGGAAGTAGGAG------TAGGTAGGTGGTAAAAGGG--GAGGGAA
TCATCATCGCTGATCCCTCATCTAGTGAACACGATCTCCCTCACCAATCAAAAC-------------ACCTCTGATGAAA
ACGGATAGGAC---AGGAGGAGGAGGAGGGCACTGAACCAGACAGACACCT----------------GTGACTGTGAGCT
GCTGCTTCTT------------------------------CTTCTTCTTCCCCGGACATGAATTCCAGCCGGAGCCTGCT
CTCGTCGCCGCTCTTCCCCACCTCCTCTCCAAACTTCAGG---------TCCTCCCCATCCCCCTCCCGCGCATCAGGTA
TCTTCAGTA------------CTGCTACAAACTTTCCTTGCCTCT--------CCTTTCTTTCTGGTATCTGTTGGCCTA
GCCCTGAGGCTCATCTG-TTTTGTGCAGTTCCGATGATACACGACAGCACGGGC---AGAGCATCCACGGCGTGCCACTA
CTCGCCCTCGCTCGTGGCCGAGGAGCAGCAGGCCCATGGCTCTGTGGCTTTGAAGGGCGAGAAGGCCTTGCTGGAGTTCC
TGCTGGACATGGTTGGTTGCCCAACACTTCCTCCTTTCATGTGTGGTCAAGAGCTCGTGATGGCTA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------AAAATATAGAAACACCATTC-----ATTTAAATAAA---TAAATAAATACTTCTACACTGGACTCTGTCCCA
TTGCTAGTGCTAGTGCTAATAAATTCTGTCTTGTCTGTCTCAACTAA----GGCCTTGGAGCAGCACACGGAAGGGAAGA
CTTTCAAAGGCGAAGACGGGGCAGAGGGCGAGTTCGAGAGCTATCTGCGAGGCCTGCAGCGGCAAGTCATTTACCAGCAG
GCCTTTGGGTAATGACACTCAGTCCCTGTTTCTGCTTACTTGCGCAAATTGATTGTTTT-CTGCTTATTCTGACATTAAC
TGAATCACATTTGATTGGTAGTCAAAAGAACAACTTTACCTCTGCAATCACTTCAACTTCAACGCCATCGGCAAAATCAG
TTCCAACTTTGGATCTTAAGACAACCTCGGCAACCTTGATGAAGGAGGTGGCCTTTTTGGCAGATGGATCAAGCCCTTCA
ACCACCCAGCTGAATGTACCACC---AACGCTTGCAACCAGTGTGGAGTCCACCCACCCGTACGAGAAGCTGCTGAGCAA
TGGGCAAGTGTTTATTCGGTCTACACGGTTGCTCGAGAGGAGATCCAAGAAGCGGAATGTTCCTCAGGCATCAACAAGCA
GTACTGATGTTGTGCAGTGCAGTGTTGCTGATTCAAAGAAGAAAGAGAAGCCAAAGAAGTATGGCAGGGTTCTCGGTCCA
GATGAACCCTTCAGGTTGTTCCTACGAGACCGCGAGACGACAGAGTTCTTGACGGCAAAGGAAGAGAGACACCTGTTCAG
TCAAATACAGGCATGTTCTTTTCAACTTCTACAACACCTTATACCATTGTATCCTT---TCCTTGATGCCCAGATGAGAT
GCAGATATTTCAGCTTGCTAATTCAAG-GATACGATGACTTTCCATGCACAGAACCTTATGAAACTAGAGGAGGCTCAGC
GTAGGCTAGAAGCACAGTGTGGCCGCGAGCCGACGCTTCCGGAGTGGGCTCAGGCCGTAGGAATGAGCTGCAAGGAACTG
CAGTCGTCCATACACATGGGAAGGCGCTGCAGGGAGAAGATGGCCCGCTCCAACTTCCGCCTTGTGATACACGTAGCTAG
GAAATACCAGGGATATGGCCTTGACATTGAGGACCTAGTTCAGGTTAATTTCACTCTTTACATTTTTTTCC------CCA
GAAAGGAGGATCAACTCATTACTGCAAAACC-----TATGCATGCCAATATCCTGTTGTAAATGTTTCTTTCCTGTCCTT
GATTTCAGGACGGATGCTGTGGGTTGATGAAAACCTTCGAGAAATTCAATCCAAGCAAGGGATGCAGGTTCCCCACGTAT
GCGTACTGGTGGATACGCCAAGCGATCAAAAAGTCTATCTTCAAGCATTCGAGACTGATTCGGTTGCCGGTATGACCTGA
ACTCAGTTCACCTTGATCTTCTAGTCTTACCATCCATGTTC-GAGAGGGGACAGGTTCATTTTAGTTTGGCATAACTAAT
TCCTGAAAATTACAGATTTCCAGATGCAATGGTGTGACCTTTGTGTTTCTTGTGCAGGAGAGTGTGTATGCACGTCTGAA
AAAGGTGGGGAAAGCAAGGCTGGAGTGCATCTTAGAAGGGGAGCAGCCTACTAACCAAAATGTAGCTAGGCGTGCGGGCA
TCACGATCGAGAAGCTGGCGAAACTCAAAGCGAAGACCAGAAAGCCACGATCAATGCAGGATCAAGTCTGGTCCAACGAC
GCTGTCACCTTCCAGGTACTAGCA----------------------------------ACAAAACACTATGTATAAAACA
TACTGCAGATCGTTCCAGGACTGAATCGATTGAGCTATGATCTTTTCGCCGGTCAGATAAACAAGAACTGAGCTGTCCTG
TGATAATCTATTGACGCTGCTGCAGGAGATCACGGAGGACCCGAACATCGATCCGCCGGACCTGGTGGTGGACAGGATTA
TGATGAGGCAGCAGGTGCGCGAGTTCCTGGGCATCCTGACCACGAGGGAGAAGGAGATCATCGAGCACCGGTTCGGGATC
TACGACGGCGAGCCCAAGACGCTCCACGTGATCGGGGACATGTACGGCCTGTCCAAGGAGCGGATCCGGCAGCTCCAGAA
CCGGGCGCTGGACAAGCTCAAGAGGAGCGTGTCCACGCAGGGGTTCCACGTCTACTTGGACCTGCTGACCTCCAACGGCT
AGCTAGGCAGCGCCTCGTTTGCTCTCGGCTCAATTGTTCATTCATACAAAAGGGAACACACATGTATGTATGTATGTATG
TATGTAGCCTAAGAAGCTAGAACCCCACTGACATGTGCAAGCCTCCTAGCTAGAGCTGAAGCAGAAAACACACAACACAC
ACTTTCAGAGTTTCAGTGCCATGTTTTTTTGCAGAGTGTAAGTAATTAAAAATTTCGCAGCAAATTAAGATGGTGGTACA
TACTACATACATACTGATACTGCAATTAATTTATTGCAACCAAGTACGTATGCCACTTGTTTTCCCGGGTCATCAGGTAC
TAAAATGAACCTTAAGATTGTTTCAAAAAAAGAAATTGTCACTAGCACATTGGTTTCATGCACCTAGGACTTGGACTGCA
GCCAAGTGAAGTCTGTTGAGTATGCCCTGTGAGCTGTGAGTC--TGGCTAGATACAGCCTTTTGTCTTTTGAAGACGGCA
GCTGATCATACCCATGATAGGACCATCACCGTGTTTTGTCCAATGACACACTCTCACCTTTTCAGTCTTTGTGTGTCTCA
GGATCCCTTTGATCCCTGCAGACCTGCTACGGTTGGGGCTCCGTTGATTAGGGCCTCATTCGGTTTGGAGGAATTCTATA
AGAAAAACGTAGGAACAATATAGATGCATTCGGTTTGTATGAAACGCGTACGGAAATTTCATAGGAATACTATTCATTTC
CTGTGTTTTTGGAGGAATCTACACATCCACACAAAGCTAATTTTGTGCGTACGAACGAGGCAAGACAATTTCTTAGGTTG
GCAAGTGCCATCCTATCAAATTCCTATACTACTCTTAATTCCTACGTTTTGATTTCTCCAAACCGAATGAGGCCTAGATT
TCTAGAGGATTTAATTTTTTCCTTTATAGTCTGTTTGATTTGTAGGATTGGAACCCTTATGGAAATTTCAAACAGCTGCT
TTGCACTCCATTTTGAATAAAAAAATTCATCCACTCAAACCTTTTTTTTTTATGGTTCCTTTATTTTTCTTGTGGCATCA
AACACTTCCTAATCCTATAAGATTCAAGTGGAGATGCCTTTCTAATCTTGTCTTTTTTTAATTCATGT---GAATCAAAT
TTGACCATGGCGTCTGTGGATGTGCTCTCAGATATCCAGAGGTACTCGTCCCATGAATCTGCAGTCGTGCCATATGCAAG
TACTCGCAAAGCGGCTGTGT-ATTTTTGGTAATTAGAGAATCCAATTCTTCGAAGGGCATCCTTCTTTAGGATGAAGAAG
TAATCGTAGGTCTTAACGCCGTTGTAGACGCGTTCGAACACATTTTCGGT-ATCCGAAAGCGCCGACGAAAACTATCCGC
AAATTAAGGCATGGGGGGCAAAGCAGTCGTCCCTCAGTGTCAAATG-CCCCACGCCATGTTCCGATTCAGCACTCGATCA
CCTTGATTGATCCCTGGAAACTGAGAACATGCTCTTCCGCATGCTCTGC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----------SS-------------------------SS----
--S-----------------S---------------------------------------------------------S-
-----------------------------------SS----------------S---S------S---------------
----------------S---S---------SS--S----------------SS-------------S-----------S-
----S-----------------------------S-----------S-------------SS-SSSSSS-SSSSSS--S-
-SSS-S-SSS--S-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------------
-----------S--------------------------------------------SSSSS-------------------
-----------------------------------------------------------SSSS-----------S-----
---------------------SSSS-S-SSSS-SSS-SSSSS--------------------------------------
------------------S---S--S-----S-----S--------------SSSSSSSSSSSSSSS-------------
----------S------------SSSSS----------------S--SSSSSS-SSSSSS-SSSSSS-------------
------S--SS---------------------------------------------------------------------
----------------------------------------------------------------------S-S-------
SS-SSSS----------------SS----S---SSS--S-SSS--SSSSSSSS--S---------SSSSSSS--------
-------S----------S----S-----------------S---------------S-S--------S--S--------
------S-----S-----------------S-----SS-------S--SS-S--------S-------------------
---------------------SSS-SS-S-SS-SS--SS-S-SSSS-SS--SSSSS-SSS-SSSS-SSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---S-S----S-S-S----S----------S--SSSSSS----------------------------SSS--
S--------S--S----S--SS-------S--S-SSSSSSSSS-SSSSS-----S--------------S----------
SSS---SS---S----S-----S---------------------S----S-----------S------------------
--S-------------------------------S--S-S--------S------S------S-----------S-S---
----S----------------------------------S-S------------------------S--S--S-------
--S---S------------S--------------------------------S-----S---S--------S--S-----
S-------------------S---S-----S--S----S---------S---S-----S-S-S-----S-----S-----
------------S--------------------------------S-----S--S----------SS-------------
-S-----------S------S----S--S--S--S-----------S-SS---------------S--------------
--------------------------------------------------------------------S-----------
----------------------------------------------S---------------------------------
-----------------------S------S----------------SS-------------------------------
----------------S---------------------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
-----------------------------------S--------------------------------------------
-----------------S-----------------------S-------------------------------------S
----------------S--------------------------------S------------------------------
---------------S-----S----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------SS----------
--SSS-SS-SSSSS------------------------------S---------------S-----------------S-
---------------------------------------------------S----------------------------
---------------------------------------S------------------------------S---------
-----------------------------------S--------------------------------------------
--------------------------------------------------------------------------S-----
--------------------S----------S----------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------S---------------S-------------------------------
----------------------------S---------------------------------------------------
--------------------------------------------------------------------------SSS---
---------------------SSSS-SSS---------------------------------------------------
--------------------------------------------------------------------------------
-SSSSSSSS-----------S------------------SS---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------SS-----------SS------------------S-------------------------S-S------
-------------SS-SSS-------S----S-------------------SSS--------------------S-----
------S-S-----------S---------S---------------SS-----------SSS-SS-SSSSS---------
S-S---S------------------S------S----SS-------S-------------------S-------------
S-S---------S--SS--SS------------SS--S------------SS---------------S-S-------S--
-S------------S-S---S-------SSS----S----S-----SS--S---S----------S------S-------
----SSS-SSS----S-------S-------------S--------S-----S---S----S------------S-----
----S--SS----------------------------S------SSSS-
>forward_122
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----------------------TTGATTTGAGGAGCGTGGCT--------------------------------------
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>reverse_1578
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---------------------------------------------------------CACTCCTTGGGCCAGTTCTT---
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>forward_163
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---------------------------------------------------------------ACTGTCCGCTGACGTTT
AGG-----------------------------------------------------------------------------
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>reverse_2181
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--------------------GCCACCGGTTACAACAAGTG----------------------------------------
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>forward_1842
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--------------------------------------------------------------AGCACACAGAAGGGAAGA
GC------------------------------------------------------------------------------
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>reverse_3531
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----------ATCGTTCTCGCCGGTCAAAT--------------------------------------------------
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>forward_2322
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--------------------------------------------------------------CTCGAGCATCAACAAGCA
GC------------------------------------------------------------------------------
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>reverse_4487
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------TGACACACCTGCTACGGTTG------------------------------------------------------
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-------------------------------------------------
