>input_sequence_29642
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---------------------------------------------------------------ATGACCGACGCGCCGTC
CGCTCCCGCCGGCGACTCGCCCCCGCCGCCGCAGAAGCCAGAGAGCGGCGGCTCCATCTCCTCCATGGTGGCCTCCTCCG
CGTCCTCCGCGGCGGCCGCGGCCGCGGACTACACGCGCCGGGGCGAGGCCTTCGGGGCCGACCTGGCCGCCGCCGCCAGG
ACCGCCGTCGACACCGCCCACGCGCACGCCTACTCCTCCGCCATCGCCGCGTCCGACGCCGCCAACGCGGCCATGGCCGG
CGCGCTCGCCGCCGTCCCCACCCTCACCCAGGCCGCAAAGGTCCGCCCTTTACCTCCCCCATTC----CCCTCGCCCCGA
TCTCACCGAAATTTGCTTAAGCTCGAACCAATTTCTTCTTCTTCTATTCTTTCCATTCAGGAAGAGTTTGAATGGGTGAA
GAAGGAGTACTTTGCTCGTGAGCAGATGGCGCTGGGCAAGATCAAAGGTGAGCAGATCGTGTGTTACAAAATCGCATATT
TGTGGACCGATCAGCATTCTTAGCTTCGGCCAGATGAATGTCTAATGGTCGGATTTGGATGTCTCGTCGGCGCATTTGTG
GGCTGCATGTGTTGAAATCAAGTATTGATTGTCACTGCCTTTGCAGAGGGTGTCATCATGGCCATCGAGCATCCAGGCAT
CGCTGCAGGCTCAGCCACGGTTGCAGGAATCGTGCTGCTCAAAAGTAATCTCATTTCCCTGCAACCCATTTGCTTTGTGG
CGTTATGTTGGATGAGATTGAGATGTTTGTATTAGAATCTGATTTGTCATTGCTTGCTATTCACAAAGAAATACGGTACC
TGCGTGTGGAGGAATGCTTTGCAGATTATTTACTCTTGTACTCCCTCCGTCCGGAAATACTTGTCCGAGGAATGGATGAA
TCTAGATGTATTTTAGTTCTAAATACATCCATTTGTATCCATTTCTCCGACAAGTATTTTCGGACGGAGGGAGTAGATGA
TAATGATTTTTAGTTGTTTGCGAATAGTGCCACATGTTGAACCATTTCCCCCTG------TATCTTGAATGAGAATTTAA
AACTTATGTTTCATTTCTTTCAGTTAACTGGAATGCCTTGATACTGCCGCAAACCAGTTAACCCTGTCCAACTTAAATTA
TCGCGCACATATCCATTCCCTGTAGATTCAGGTTGTCTGATTGCATTATTCTTTT-------GATATTGGATTAGGTGAA
TTATATTACAGCTTCCCTGAAATTCAGTTCAGATTATCCAACCTTTAATGTGTAGGTGTAATTTCTAGCATTTCACGGTA
CAAATTACAATGTTGTTGATTCCGTGGAAGTTTGCTCCATGATGTTTCATGAAGGCCGAAAAATTGGATGCTTTCTTGTA
TACTGCTAAATTTAGTATGACTGAAACTGAGTCATTGATCGTTGCAGGGCCAAGGAGCTACCTAATCCAACGTGTACGGC
GTGTATTTGTCAGCAAGGAGGTGAGCACTACCTGTCAGTTTAATTAGCTCATAC-----TTCATTGTGAATTGACAAGTT
ATTTGCAAGCTTAAT---TGGGAGCTACATCAACCATCTTATAACTTGTCATATCTTACTACTTGTTGATTAACTCTGAC
CTGTTGAGCAATATGTTTTATTATTTGCATCAGCATGTTATAATACAGTTCCTTCTGTTTTTAGAACATAAATGATCGTG
GTTTTATGAAGTTTGTTTTTGGTACCTGCAGTCTTTAACAACAGCGTTGATTTTCCTTAGAAACAAAAAATAATAATAGG
TGGGTTGTCTAACGCAACTTGCTGTATTGTAGACCCTACTTTCTGGCATCCAGGCTGAAGTGAATCACATGCGGCAAACA
GTCAATCTTATGTCGAATGAAAGCCAAAAACTCATGGTAACTTTCTTTATGTATAGATAGAACACCAAGACATTTGTTTT
CAACCTGGCAATTGTAATTTCTATGTTACTCATGGTTAAAT-TATTGCATATGGGTTCCAGGACCGAGCTGCAACAGCAG
AAAAGAGATTCCAGAAAGGATGGAATACACTCAGGCATGTAGTTCCTTGTTTGACCCAGTTATCATTTCTGTTTCTATTT
GTTT-------TTAATATAACATTGGAATGGATGTACACCTTCTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGTTGAA
GCAAATCAGTGATATTGAAAACCAAGCAGTAGGTGCGTGGAATTCCTTGAGAGGCCATTGCTTTGTTTAATGACTTCGAA
TTTGGTGTGGAAATTTCTTGCCTTGAATCTTACATATGTTGAAATGCTCCCTCTTAGGTCTCAAGGGAATTCTCGATCAG
CTTCCAAGAGCACATGCATCTGAATTTCGATCAGAGGTCAGTAGATATAACTGTAGTTTGCATTTCATTGCACTACTATT
CTCC---TCTTCAAGTATGTACAGGTTATGTGTTGACTAGTTGTACTATTATCTTTGCTCGTCAATCCGTCCACAATAGA
TTGCACCCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
TCTCCTTTGTAAATATATGTAATTTTTTGTTGTTGGTGAAGCTGGAGAATTTTGTAATGTAAGTTCATGTCAACATTGTT
TTCTCTTTTCCCGGCAGATTTCCGGCCTAGCCTCTCAGGTCAAGAAGGAGAAGCGTGTGCTCAACTCCGCCCTGACGAAG
ATTGTGAATTATGGCGTCCCTATCTAA-----------------------------------------------------
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>chr6D_1_TraesCS6D01G017900
GCTTCTTCGGGCCCGAAAAGATGCGCTAAAATTCGTCCGCTAATCGCCGCGTCCGCCGCTATATCTTAGGGGGTGGGTGT
GTTTTAGGCCGGGTTCCCATCTTGGATAAGCTCCGCCCACCTCCGCCGCAATCCTCTCCCCTCCGTCGTCTTTTTTAGTT
TCTCCGGCGAGCGATTTTCGACCGTTTTTTTCTTGCACAGATCAAGCAAATCCATAGCAGGAGGTGCCAGGGGACGTGGG
GCAGCGATGGGTCGCCACCGCGCAAGCGCGCCCAGCGCGACGCGGAGGCCAGCAGCTCCAGCTAGCCCACCGTCGAGCCG
TGGGACTCGAGGAAGGTGCGCGAACGCGACCCGCTCTCCCACAGAGGCAGTCGTGGCACATGGAGCCACTTCAACGAGCT
CGGCGACCAACTTTGGCCAACCACCAAGGGCATCGAGCTCACGGCGGCGGCCGATAAAGACAGCGCCATCGAACGGCTCG
AGGCGGCAGAGGAAGCATTCGAGCTCGCGAACGCACTCTACCGATCGGCATGCGAGTACTCGGAACGCCAATCTATTGCG
GAAATGCGATTGGAAAAAATAGATTGACGTCAAGCTGGTTTTTTTATTTATGTTTTTATTAGTTTATCTGTGTTGATGAT
CTCTGGTGTGTTCTGGACGTATCATATAGGGGAACGAAATTATGTTTAAGCTTCTAGATTTCGTGTACGGTTTGCAAGAT
TTGTTCTACGCCGGGGCTTAACTGCCAATAAAATTATTTTAGGGCGAACCGTAAAACGATCTCGCGGGACGGATTTTTCA
TCTGCTAGAGTTGCTCTCATATTGTGATAGAAATCAACATCCTCTCACCTACAATGGTTTGTCAATTGGTCTACCGCGGG
AACAGATAGAATGCGTATAACGAGAATACGTGTCCATGCCTTGAAAGCGTGCTCCAGGCAGTACGCAAGTCTATTTTT-C
CAATCCCATTTCCGCAAAACAGGTCCGGATCCG----------------------CCGCCGCCATGACCGACGCGCCGTC
CGCTCCCGCCGGCGACTCGCCCCCGCCGCCGCAGAAGCCAGAGAGCGGCGGCTCCATCTCCTCCATGGTGGCCTCCTCCG
CGTCCTCCGCGGCGGCCGCGGCCGCGGACTACACGCGCCGGGGCGAGGCCTTCGGGGCCGACCTGGCCGCCGCCGCCAGG
ACCGCCGTCGACACCGCCCACGCGCACGCCTACTCCTCCGCCATCGCCGCGTCCGACGCCGCCAACGCGGCCATGGCCGG
CGCGCTCGCCGCCGTCCCCACCCTCACCCAGGCCGCAAAGGTCCGCCCTTTACCTCCCCCATTC----CCCTCGCCCCGA
TCTCACCGAAATTTGCTTAAGCTCGAACCAATTTCTTCTTCTTCTATTCTTTCCATTCAGGAAGAGTTTGAATGGGTGAA
GAAGGAGTACTTTGCTCGTGAGCAGATGGCGCTGGGCAAGATCAAAGGTGAGCAGATCGTGTGTTACAAAATCGCATATT
TGTGGACCGATCAGCATTCTTAGCTTCGGCCAGATGAATGTCTAATGGTCGGATTTGGATGTCTCGTCGGCGCATTTGTG
GGCTGCATGTGTTGAAATCAAGTATTGATTGTCACTGCCTTTGCAGAGGGTGTCATCATGGCCATCGAGCATCCAGGCAT
CGCTGCAGGCTCAGCCACGGTTGCAGGAATCGTGCTGCTCAAAAGTAATCTCATTTCCCTGCAACCCATTTGCTTTGTGG
CGTTATGTTGGATGAGATTGAGATGTTTGTATTAGAATCTGATTTGTCATTGCTTGCTATTCACAAAGAAATACGGTACC
TGCGTGTGGAGGAATGCTTTGCAGATTATTTACTCTTGTACTCCCTCCGTCCGGAAATACTTGTCCGAGGAATGGATGAA
TCTAGATGTATTTTAGTTCTAAATACATCCATTTGTATCCATTTCTCCGACAAGTATTTTCGGACGGAGGGAGTAGATGA
TAATGATTTTTAGTTGTTTGCGAATAGTGCCACATGTTGAACCATTTCCCCCTG------TATCTTGAATGAGAATTTAA
AACTTATGTTTCATTTCTTTCAGTTAACTGGAATGCCTTGATACTGCCGCAAACCAGTTAACCCTGTCCAACTTAAATTA
TCGCGCACATATCCATTCCCTGTAGATTCAGGTTGTCTGATTGCATTATTCTTTT-------GATATTGGATTAGGTGAA
TTATATTACAGCTTCCCTGAAATTCAGTTCAGATTATCCAACCTTTAATGTGTAGGTGTAATTTCTAGCATTTCACGGTA
CAAATTACAATGTTGTTGATTCCGTGGAAGTTTGCTCCATGATGTTTCATGAAGGCCGAAAAATTGGATGCTTTCTTGTA
TACTGCTAAATTTAGTATGACTGAAACTGAGTCATTGATCGTTGCAGGGCCAAGGAGCTACCTAATCCAACGTGTACGGC
GTGTATTTGTCAGCAAGGAGGTGAGCACTACCTGTCAGTTTAATTAGCTCATAC-----TTCATTGTGAATTGACAAGTT
ATTTGCAAGCTTAAT---TGGGAGCTACATCAACCATCTTATAACTTGTCATATCTTACTACTTGTTGATTAACTCTGAC
CTGTTGAGCAATATGTTTTATTATTTGCATCAGCATGTTATAATACAGTTCCTTCTGTTTTTAGAACATAAATGATCGTG
GTTTTATGAAGTTTGTTTTTGGTACCTGCAGTCTTTAACAACAGCGTTGATTTTCCTTAGAAACAAAAAATAATAATAGG
TGGGTTGTCTAACGCAACTTGCTGTATTGTAGACCCTACTTTCTGGCATCCAGGCTGAAGTGAATCACATGCGGCAAACA
GTCAATCTTATGTCGAATGAAAGCCAAAAACTCATGGTAACTTTCTTTATGTATAGATAGAACACCAAGACATTTGTTTT
CAACCTGGCAATTGTAATTTCTATGTTACTCATGGTTAAAT-TATTGCATATGGGTTCCAGGACCGAGCTGCAACAGCAG
AAAAGAGATTCCAGAAAGGATGGAATACACTCAGGCATGTAGTTCCTTGTTTGACCCAGTTATCATTTCTGTTTCTATTT
GTTT-------TTAATATAACATTGGAATGGATGTACACCTTCTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGTTGAA
GCAAATCAGTGATATTGAAAACCAAGCAGTAGGTGCGTGGAATTCCTTGAGAGGCCATTGCTTTGTTTAATGACTTCGAA
TTTGGTGTGGAAATTTCTTGCCTTGAATCTTACATATGTTGAAATGCTCCCTCTTAGGTCTCAAGGGAATTCTCGATCAG
CTTCCAAGAGCACATGCATCTGAATTTCGATCAGAGGTCAGTAGATATAACTGTAGTTTGCATTTCATTGCACTACTATT
CTCC---TCTTCAAGTATGTACAGGTTATGTGTTGACTAGTTGTACTATTATCTTTGCTCGTCAATCCGTCCACAATAGA
TTGCACCCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TCTCCTTTGTAAATATATGTAATTTTTTGTTGTTGGTGAAGCTGGAGAATTTTGTAATGTAAGTTCATGTCAACATTGTT
TTCTCTTTTCCCGGCAGATTTCCGGCCTAGCCTCTCAGGTCAAGAAGGAGAAGCGTGTGCTCAACTCCGCCCTGACGAAG
ATTGTGAATTATGGCGTCCCTATCTAACCGTCTCCGCCGTTGTCCCTGCGGTCACATTTCTGCTT--TTTTAACCTCAAG
GAACATGAAGTGCAAGCCATTGGCGGATCTTTAT---CAGAAAATATCTTCCCATGGAATGGAAGAAACAATAAGTTTTG
TCACTCCTGTAAATGCGCTTCTGCTGCGCTGAATTCTGACCAGCAACAGATGACACTCTGCGGTGTCTTTGTTCATCGAC
ATTGGTTGATGTTATTTTAAATATATATTTTGGTATGATTTGCAGTTTTCTCTTCGTTAGTATCTGTTTGCATGGTGCTG
GAGGATCTGACACTATATGCTCCAGTTTTTC-TTTTCCTTTTGCGGGAAAATATACTCCAGTTTGTCATATAGAGGATTT
TATGAAATCGCAAAATTCTAACCATATATAAGATTCAAGATGTTGCATTGTAATGTAAGACGTGTTGATTTCCTTTGTTC
AGCAATTGGTCCAATTATACTTGAATCAATAT---ATAATAGATACAGATTAATTGGGCACAATGAAAAGAGGTTTCTGA
ATGCCAATCCAATGAT----ATTAATTTTGTATTGCACAATCCACATATTCTCATTTAAAAAATATAAATCTACATTTTG
TTTAGCAATTTCTTGGTCAAATATAAATGTCAGATGTGCTTTTTATATTTTGGACCCCTTAGCTGGCGAGCAGTCGCTGG
GAGGAGCCTCCCATCGAACGCATTCGTTCGCCAGCGGAGGTCCTCCCAGCAAACGTTTCCCTCGTTTCGCCAATGGGAGG
GCCATGGCGACCCCCCAATTGGCCCATTAAATAGTTTTTTTTTTAGAAAATGCCATAAAAAAAATCAGAAAAATGGAAAA
ATGGAAAAACGCCACAAAAGTTGCCATGTTCCTAGTCATCACCCAAACTTCTTGTTTGTAAAAAAACGTGGCACAAAAAA
ATGCTACCTTTCAGTATTAAAATGTCATCATCTTAAATAATAAAATCCTACAAATAAAAAAATGACATGCTATTATAAAA
>chr6A_880
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------G
AACAAATGGAATGCGTATAGGCAGAATACGTGTCCACGCCATGAAAACGTATTCCAGGCAGTACGCCAATCTATTTTTCC
CAACCCCATTTCCGCAGAACAGGTCCGGATCCGACGCAGCCACAGCCCCACCGCGCCGCCGCCATGACCGACGCGCCGTC
CGCTCCCGCCGGCGACTCGCCGCCGCCGCAGCAGCAGCCAGAGAGCGGCGGGTCCATCTCCTCCATGGTGGCCTCCTCCG
CGTCCTCCGCGGCGGCCGCGGCCGCGGACTACACGCGCCGGGGCGAGGCCTTCGGGGCCGACCTGGCCGCCGCCGCCAGG
ACCGCCGTCGACACCGCCCACGCGCACGCCTACTCCTCCGCCATCGCCGCGTCCGACGCCGCCAACGCGGCCATGTCCGG
CGCGCTCGCCGCCGTCCCAACAATCACCCAGGCCGCTAAGGTTCCGCCTTCTACCCCCACATTC----CCCT----CCGA
TCTCGCCGAAATTTGCTCAAGCTCGGGTTGATTTGTATTTTTCCCTTGGTGT------AGGAAGAGCTGGAATGGGTGAA
GAAGGAGTACTTTGCTCGTGAGCAGATGGCGCTGGGCAAGATCAAAGGTGAGCAGATCGTGGGTTACAAAATCGCATAAC
TATGGACGGATTATCATGATTAGCTTGGGTCAGATGAATGTCCAATGGTCGGATTTTGATCTCTCGTCGGCGCATTTGTG
G-CTGTATACGTTGAAATCAAGTATTGATTGTTGCTGCCTTTGCAGAGGGTGTCATCATGGCCTTCGAGCATCCGGGCAT
TGCTGCGGGCTCAGCCACGGTTGCAGGAATCGTGCTGCTCAAAAGTAATCTCATTTCCCTGGAAACCATTTGCTTTGTGG
CGTTATGTTGGATGAGATTGAGATGTTTGTATTAGAATCTGATTTGTCATTGCTTGCTATTCACAAAGAAATACGGTACC
TGCGTGTGGAGGAATGCTTTGCACATTATTTACTCTTGTAAAG-------------------------------------
------------------------------------------------------------------------------GA
TAATGAGTTTTAAGTTGTTTGCAACCATTTC----------------CCCCCTG------TATCTTGAATGA-AATTTAA
AATTTATGTTTCATTTCTTTCAGTTAACTGGAATGTCTTGATACTACCGCAAACCAGTTAACTGTGTCCAACTTAAATTA
TCATGCACATATCCTTTCCCTGTAGATTCAGGTTGTCTGATCGCATTATTCTTTTGATATTGGATATTGGATTAGGTGAA
TTATATTACAGCTTCCCTGAAATTCAGTTCAGATTATCCAACCTTTAATGTGTAGGTGTAGTTTCTAGCATTTCACGGTA
CGAATTACAAGGTTGTTGATTCAGTGGAAGTTTGCTCCATGATATTCCATGAAGGCTGAAAAATTGGATGCTTTCTTGTA
TACTGCTAAATTAAGTGTGACTGAAACTGAGTCATTGATCGTTGCAGGGCCAAGGAGCTACCTAATCCAACGTGTACGGC
GTGTATTTGTCAGCAAGGAGGTGAGCACTACCTGTCAGTTTAATTAGCTCATAC-----TTCATTGTGAATTGACAAGTT
ATTTGCTAGCTTAATATTTGGAAGCTGCATCAACCATCTTATAACTTGTCATATCGTACTACTTGTTGATCAACTCTGAC
CTGTTGAGCAATATGTTTTATTATTTGCATCAGCATGTTATAATACAGTTCCTTCTGTTTTTAGAACATAAATGATCACG
ATTTTATGAAGTTCGTTTATGGTACCTGCAGTCTTTAACAACAGGGTTGATTTTCCTTAGAAACA-------ATAATAGG
TGGGTTGTCTAACACAACTTGCTGTATTGTAGACCCTACTTTCTGGTATCCAGGCTGAAGTGAATCACATGCGGCAAACA
GTCAATCTTATGTCGAATGAAAGCCAAAAACTGATGGTAACTTTCTTTATGTGTAGATTGAACACCAAGACATTTGTTTT
AAACCTGGGAATTGTAATTTCTATGTAACTCATGGTTAAAACTATTGCTTATGCGTTCCAGGATCGAGCTGCAACAGCAG
AAAAAAGATTCCAGAAAGGATGGAATACACTCAGGCATGTAGTTCCTTGTTTGACCCAGTTATCATTTCTGTTTCTATTT
ATTT-------TTCATATAACATTGGAATGGATGTACACCTTCTCAGGGAAGAAGGGCGTGCCATTCAAACTGAGTTGAA
GCAAATCAGTGATATTGAAAACCAAGCAGTAGGTGCGTGCAATTCCTTGAGAGGCCATTGCTTTGTTTAATAACTTCGAA
TTTGGTGTGGAAATTTCTCGCCTTGAATCTTACATATGATAAAATTCTCCTTCTTAGGTCTCAAGGGAATTCTTGATCAG
CTTCCAAGAGCACATGCATCTGAATTTCGATCAGAGGTCAGTAAATATAACTGTAGTTTGCACTTCATTGCACTACTATT
---C---TCTTCAACTATGTACAGGTTATGTGTTGACTAGTTGTACTATTATCTTTGCTCGTCAATCCGTCCACAATAGA
TTGCACCCA-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
TCTCCTTTGTAAATATATGTAATTTTTTGTTGTTGGTGAAGCTGGAGAATTTTGTAATGTAAGTTCATGTCAACATTGTT
TTCTCTTTTCCCGGCAGATTTCCGGCCTAGCCTCTCAGGTCAAGAAGGAGAAGCGTGTGCTCAACTCCGCCCTCACGAAG
ATTGTGAATTATGGCGTCCCTATCTAACTGTCTCCACCATTGTCCCTGCGGCCATATTTCTTCTTCTTTTTAACCTCAAG
GAACATGACGTGCAAGCCATTGGCGGATCTTTTT---CAGAAAATATCTTCCCATGGAATGGAAGAAACAATAAGTTTTG
TCACTCCTGTAAATGCGCTTCTGCTGCGCTGAATTCTCACCAGCAACAGATGACACTCTGCGGTGTCTTTGTTCATCGAC
ATTGGTTGATGTTATTTTAAATATATATTTTGGTATGATTTGCAGTTCTCTTTTCGTAG-TATATGTTTGCATGGTGCTG
GAGGTTCTGACACTATATGCTCCAG-TTTTT-TTTCCCTTTTGCGGGAAAATATACTCCAGTTCGTCATATAGAGGATTT
TATGAAATTGCAAAATTCTAACCATATATAAGGTTCAAGATGTTGCATTGTAATGTAAGGCACGTTGATTTCCTTTGTTC
AGCAACTATACTTGAAGTAT-------AATAT---ATAATAGATACAGATTAATTGGACAAGATGAAAAGAGGTTTCTGA
ATGCCAACCCAATGATCTCTATTAATTTTGTATTGCACAATCCACATATTCTCATTTAAA-AAAATAAATCTACATTTT-
TTTAGCAATTTCTTGGTCAAATATAAATGTCAGATGTGCTTTTCATATTTTGGACCCCTTAG------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
>chr6B_1066
--------------------------------------------------------------------------------
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------------------------------------------------CGGGTCCCTCTCCTCCATGGTCGCCTCCTCCG
CGTCCTCCGCGGCGGCCGCGGCCGCGGATTACACGCGCCGGGGCGAGGCCTTCGGGGCCGACCTGGCCGCCGCCGCCAGG
ACCGCCGTCGACACCGCCCACGCGCACGCCTACTCCTCCGCCGTCGCCGCGTCCGACGCCGCCAACGCGGCCATGGCCGG
CGCGCTCGCCGCCGTCCCCACCCTCACCCAGGCCGCAAAGGTCCGCCCTTTATC-CCCCCATTCCCCTCCCTCGCTCCGA
TCTCACCAAA--------------------ATTTGTATTTTTCTCGTGATGT------AGGAAGAGCTGGAATGGGTGAA
GAAGGAGTACTTTGCTCGTGAGCAGATGGCGCTGGGCAAGATCAAAGGTGAGCAGATCGTAGGTTACAAAATCGCATAAC
TATGGATGGATTATCATGCTTAGCGTGGGTCAGATGAATGTACAATGGTCGGATTTGGATGTCTTGTCGGCGCATTTGTG
G-CTGCATACGTTGAAATCAAGTATTGATTGTTGCTGCCTTTGCAGAGGGTGTCATCATGGCCATCGAGCATCCGGGCAT
CGCTGCGGGCTCAGCTACGGTTGCAGGAATCGTGCTGCTCAAAAGTAATCTCATTTCCTTGGAACCCATTTGCTTTGCG-
---------------------------------------------GTCATTGCTTGCTATTCACAAAGAA-TATGGTACC
TGCATGT---GGAATGCTTTGCACATTATTTAATCTCGTAGAG-------------------------------------
------------------------------------------------------------------------------GA
TAATGAGTTTTAGTTGTTTACGAATAGTGCCACATGTTGAACCATTATTCACAAAAACAATATCTTGAATGAGAATCTAC
AATTTGTCTTTCATTTCTTACAGTTAACTGCAATGTCTTGATACTGCTGTAAACCAGTTAACTGCGCCCAACTTAAATTA
TCGTGCACATATCATTTCCCTGTAGATTCAGGTTACCTGATTGCATTATTCTTTTA-------ATATTGGATTAGGCGAA
TTGTGTTACAGCTTCTCTGAAATTCATTTCAGATTATCCAACCTTTAATGTGTAGGTGTAGTTTCTAGCATTTCACGGTA
TAAATTACAAGGTTGTTGATTCAGTGGAAGTTTGCTCCATGATGTTGCATGAAGGCTGAAAAATTGGATGCTTTCTTGTA
TACTGCTAAATTTAGTATGACTGAAACTGAGTCATTGATTGTCCCAGGGCCAAGGAGCTACCTAATCCAACGTGTACGGC
GTGTATTTGTCAGCAAGGAGGT-AGCACTACCTGTCAGTTTAATTAGCTCATACAGTACTTCATTGTGAATTGACAAGTT
ATCTGCTAGCTTAATGTTTGGAAGCTGCATCAACCATCTTAT--CTTGTCATATCTTACTACTTGTTGATTAACTCTGAC
CTGTTGAGCAATATGTTTTATTATTTGCATAAGCATGTTATAATACAGTTCCTTCTGTTTTTAGAACATAAATGATCACG
GTTTTATGAAGTTCGTTTATGGTAACTGCAGTCTTTAACAGCAGGGTTGATTTTCCTTAGAAACAAAAAATAATAATAGG
TGGGTTGTCTAACGCAACTTGCTGTATTGTAGACCCTACTTTCTGGCATCCAGGCTGAAGTGAATCACATGCGGCAAACA
GTGAATCTTATGTCGAATGAAAGCCAAAAACTGATGGTAACTTTCTTTATGTATAGATAGAACACCAAGACATTTGTTTT
CAACCTGGGAATTGTATTTTCTATATTACTCATGGTTAAACTTATTGCA-ATGGGTTCCAGGATCGAGCTGCAACAGCAG
AAAAGAGATTCCAGAAAGGGTGGAATACACTCAGGCATGTAGTTCATTGTTTGACCCTGTTATCATTTTTATTTCTTTAT
ATTTTGTTTGCTTCATATAACACTGGAATGAATGTACACCTTCTCAGGGAAGAAGGGCGTGCCATTCAAAGTGAGTTAAA
GCAAATCAGTGATATTGAAAACCAAGCAGTAGGTGCGTGCAATTCCTTG-----------CTTTGTTTAATGACTTTGAA
TTTGGCGTGGAAATTTCTTGCCTTGAATCTTACATATGATGAAATGCTCCCTCTTAGGTCTCAAGGGAATTCTCGATCAG
CTTCCAAGAGCACATGCATCGGAATTTCGATCAGAGGTCAGTAGATGTAACTGTAGTTTGCATTTCATTGCACCACTATT
---CTCCTCTTCAACTATGTACTGGTTATGTGTTGACTAGTTGTACTGATATCTTTGCTCTTCAATCCGTCCACAATAGA
TTGCACCCATCTCCTTTGTAACTTACTACTTACTTAGTTACTAAGCCTTTTGTCCCAAACAAGTTGGGGTAGGCTAGATA
TGAAACCCTTTCACGAGGACTTCCCAGGAGGTCACCCATCCTATTACTACTCTCGCCCAAATGGGTTTCATACCCAAAGG
ACTGGCTAGTTTTTACGTTGGCTCGCCAAGCGTATCACAACACTTAGATATGAAACCCTTTCACGAGGACTTCCCAGGAG
GTCACCCATCCTAGTACTACTCTCGCTCAAATGGGTTTCATACCCATGGGACTGGCTAGTTTTTACGTTGGCTGGCCAAG
CCTATCACAACCCTCCTCCTTTACCCGGGCTTGGGACCGGCTATGCGCCTATGCCTAGAAGACATAGGCGGAGTTACCCA
TCTCCTTTGTAAATATATGTAATTTTTTGTTGTTGGTGAAGCTGGAGAATTTTGTAATGTAAGTTCATGTCAACATTGTT
GTCTCTTTTCCTGGCAGATTTCCGGCCTAGCCTCTCAGGTCAAGAAGGAGAAGCGTGTGCTCAACTCCGCCCTGACGAAG
ATTGTGAATTATGGCGTCCCTATCTAACCGTCTTCACAATTGTCCCTGCGGCCACATTTCTTCTTCTTTTTAACCTCGAG
GAACATGAAGTGCAAGCCATTGGCGGACCTTCTTCCGCAGAAAATATCTTCCCATGGCATGGAAGAAACAATAAGTTTTG
TCACTCCTGTAAATGCGCTTCTGCTGCGCTGAATTCTGACCAGCAACAGATGACACTCTGCGGTATCTTTGTTCATCGAC
ATTGGTTGATGTTATTTTAAATATATATTTTGGTATGATTTGCAGTTCTCTCTTGGTAC-TATCTGTTTGCATGGTGCTG
GAGGATCTGACACTATATGCTCCAG-TTTTTCTTTTCCTTTTGCGGGAAAATATACTCCAGTTTGTCATATAGAGGATTT
TATGAAATTGCTAAATTCTAACCATATATAAGATTCAAGATGTTGCATTGTA-----AGACGCGTTGATTTCCTTTGTTC
AGCAACTAGTCCAACTATTCTTGAATTAATATATAATAATAGATACAGATTAATTGGGCACCATGAAAAGAGGTTTCTGA
ATTCCAACCCAATG----CTATTAATTTTGTATTGCACAATCCACATATTCTCAGTT-AAAAATATAAATCTACATTTTG
TTTAGCAATTTCTTGGTCAAATGTAAATGTTAGATGTACTTTTTATATTTTGGACCCTTTAGCTGGCGACCAGTCGCTGG
GAAGAGCCTCCCATC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-
----S--S-----------SSS--------------S---S-----S---SS--------------S-S-----------
---S------------S---------------------------------------------------------------
---------------------S-------S----S----------------S----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------S-S--------------------S----
-----------------S-------SSSSS----S-SS--S-S-SS-SS-S-SSSSSS--------S-S-----------
-------------------------------------------------------------S----------------SS
-S-----S---S-S---S--------S--S------------S-------------------------------------
-S------SS----------------------SS----------------------------------------S-----
------S------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------S----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--
------S------------S--------------------------S---------------------------------
--S--------------------------------S--------------------------SS----------------
---S----------S-----------------------------------------------------------------
------------------------------------------------------------S-------------------
----------S-----------S-----------------------S---------S-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S--------------S----S-----------------------------------------------------
-----------------------------------------------------------------------------SS-
-------------S----S-------------------------S-----------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
--------S-------------------------------S----------------------S----------------
--------------------------------------------------------------------------------
S------------S------------------------------------------------------------------
---------------------------------------S----------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
SSS-----------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------S--S------------S---------S------------------
--------------------------------S-----------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------S---------SSS--------------------
-------------------------S----S-------------------------------------------------
--------S-----------------------------------------------------S-----------------
-----S-S------S-----------S----------------------------------S------------------
-------S------------------------------------------------------------------------
---------------------------------------------------------------------S----------
--S------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_40
--------------------ATGCGCTAAAATTCGTCCGC----------------------------------------
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>reverse_1882
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-----------------------------------------TCCCTCCGTCCGGAAATACT-------------------
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>forward_101
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-TTTTAGGCCGGGTTCCCATC-----------------------------------------------------------
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>reverse_1980
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-----------------------------------------------------------TCGGACGGAGGGAGTAGATG-
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>forward_1898
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--------------------------------------TACTCCCTCCGTCCGGAAAT----------------------
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>reverse_3240
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---------------------------------------GAATTCCTTGAGAGGCCATTGC-------------------
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>forward_1899
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---------------------------------------ACTCCCTCCGTCCGGAAATA---------------------
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>reverse_3319
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--------------------------------------TTGAAATGCTCCCTCTTAGGTCT-------------------
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>forward_1901
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-----------------------------------------TCCCTCCGTCCGGAAATACT-------------------
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>reverse_3441
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CTCCTCTTCAAGTATGTACAGGT---------------------------------------------------------
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>forward_2143
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-------------------------------------------CTGCCGCAAACCAGTTAACC-----------------
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>reverse_4426
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-------------------------TTTTTCTTTTCCTTTTGCGGGA---------------------------------
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