>input_sequence_29599
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-------------------------------------------------------------------------ATGGACG
CGGCGGCGGCGGCGGC------CGGCGGCCACCGCTGGACGGAGGAGGTGGACGACCTGGTGGACGCCGGGGACGTCGAC
GGCGCCATCTCCCTCCTCGAGTCTGTCGTCTCCAGCCTCTCCACCGCCGCCTCCCCGCCTCG---GGCGGGCGCCGATCT
CCGCCTCGCCACGGCGCTCGGCGACCTCGCCGGCCTCCACGCCTCCCGCGGCAACACGCTCCAGGCCGACGCCATCCGCT
CCCGCGCCATCGTCCTCCGCCTCCGCGCCCAGAAAGAAGCCCCCCAGCCCCAGGCCCTAGGGTTTGCTCCTCCTCCTCCC
CCAAGCTCTGTTCTTGCTTCTGAACCGAATCTTGGCCTGCTCGACCTGGACTTGCCAATTTGCAATTTTTTAGCTGTTTT
CTCTGTAAATTCGAGTAGCTTCTAGCTCGCGATCTCGTAGATGTCAGAGCACGGATCACGCAAATGTGGCACACGATCTG
AACAAACTCAGCTGCAGCTGCTCCCTGTTTGGGCCATCTGACCTGACTAACTCCTGCTCTGCTTCTGATAATGTACATTG
AAGGGATCATGCGGCAACGGAGAATTCTGCATCGCCGGAGGCTGCTACGGGATCCAAGGACTCGAAAGCCTCAGCTAGCG
TCGACAAGAAGGACGAAGATGAAGACGATGGTATTATTCTAGTGGCCTCTGTCTCTGTGCT-AAGCTGAAAACAGCTCAG
GCAAAACTGAGACATTAACATTCTTCCTCTGACGCATATGCAGATTGGGAGGCTATTGCGGACCGTGGCGACGAGACGCC
GGTGCGCCCCCTCGTGCAAGAGGCGAGGGTGACAACACCTTGTAGTTCTTCAGAGAAAAGTAGCACTTCATCTTCAGGGA
CCAAGAGGAGGGGAAGGGGTTCTTTTCTTTATGATAAGAGTGTTCTGTACAGCGACCAGTGCGCTTCAGAGAGGGATCTG
GATGACAAGGGGTCTGATCCAGCTCATGGTCGATCAAAGGGTCGTGCGGATGAGAAAGATAATAAGGATGGTAATTTATT
CAGGATGACTAGTCTTCTCTGTCTAGTTAGCTTGCTCATGGTGGGTAAACTAAACTCTTGTTCTTT-TGTTTGGTTTTGC
AGCTGCAAAACGATTTGGGACAAGGCATGCCCTTGTTCTTTACGACTTCCCACCTAGTACACGCACAACAGATTTGGAAA
GGATTTTTGAGAAGTTTGGAGACCATGGAGTTGCCATCCGCTGGGTCAATGATTCTGTTGCACTTGCAGTTTTCCGGACC
CCATCATCTGGTAATTTGATTCTGATAGTTACTTCTGATAATCTTTCTGCATGTTTCTTCGTATTCCATGATCTAGAAAC
TGTCGCCACATTCTTGTTTAACCTAGACTTTTGTATTATTGAAATGTATACGTACACAACTCCACCTATGGAAGCAAAGC
TCTGATGTCAAATAAGATGCATTGGACAAGCATTATTTCCATTTTCATAATTATTTCCTGCCGAAGGGCAGTTCCCCAGA
TTTTCATTGTGAGGGCA--------------------------CTAAATTAATAGAGGAAATCATTGTAATTCCTTTTTT
CCAATTAGGCCGCGTGGGACTTTGTTTATTTCGTGATATATGTGTAATTTTGATATCTATGAG-----AAAACATGACAG
TTATGAAGTCCAACCTAGATAGCAAAATGCATAATTGACTATTAGACTTTC-TTTATTGCTCAAGCTAT--ACTGTTGTG
CAGGTTCAGTGTTCTTCCATTGTTTTGGACCATAGAACTTTGTGCTGATTATATGAACTTGCAAGATTTCTAT-ACTTAT
GTTCCCTGGTTCTAATCGATGCATTCTGACCGCTTCATTCTGGCCTATTGACCTGTAGCTAACTGGTCACAAGCTTGTGT
GCTTCCC----ACAAAGTACAAAACATGATATG-------AAGTACAAATTGGCACACATCCCTTATTCCAATTAGGTTA
CGTGACACTTTGTTTATCTCATGATGTATGCGTAATTTTGATGCACGAGCATACAAAAAATGGTATTCCTGAAGTCCAAT
GCTGAAAGCAGAATGCATA---------------------ATAATTTTGTAGAAAGCAGAGTACATAATTTACTGTTAGT
CTTGGTTTATTGTTGAAGCTTATACTTTCATGCTGGTTCAGCG---TTTTCCATCCTGCTGGTACTTAGAACTTATGCTG
ATGATACGAACTTGCAAGGTCTCTGTACTTCTGTTTTCTGGCTTTATTGATTCTATTCTGGCCTATTGACCTGTTGGCCT
GTTGTCATGTACTCCTGTAGCTAAGGAGGCACAAGCTTCCGTGCCTCCAAGATACAAAGTACGGCCACTAAAGGATAATG
ACGATCTTTTGGCAAAAATCGATGGTACAGGTAACAGCTTGTTCCTTGTGATGATCCTTTTCAGTTTGATCTTCTTCTCC
CTAAGGATCATGTGTAGTTCATAGCTCATACCTTCCACCGTATGTTGTTTC-CATGTTGAACTGCAGACCTAGAACCGCC
GACGCCGAGGCCGAAGACGTCGGCGAGAACGGCGCAGAGGCTGATCGCCCACGGGATGGGACTAAAGCAGTTCACGACCA
TGGATGCAGGCGAGCGGAAAGAGCAGGAGGAGGCAAGGAGGAGCCGGATCACCGCCCGACAAGCTGCGCGCGACGATGCC
TGGGGTGAGGACTGA-----------------------------------------------------------------
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>chr3B_1_TraesCS3B01G582500
TCTCCTCCAACTTCGTGATTATTTGGTCTGAAGCAGCAAGCTCAAAAAATTTGTAACTGATTCTAACAAACTTCCTTGTA
CTCCTTAGGGTAAAACCCACCACCATCACAATTCTCCTAACTAACAACATTATCAGTATAAAACACTTTCAAACATAGAA
GAAATGAAAGAGAAGGATAGAGGGAAAAGGAGAAATGAGAGAAGAAATAACACAACAAGGGTTACATGTAGTTTGGACGT
GATTAGCTTCTTCATCATGATACCATGCCATTGATCAAGTCGCCACCTCGCCATTGAAGTTACTACGGCGAGGCATTACT
CAAGATCCGTCCATCCGAAGAGAGGGAGGAGTGGAAGAAGATGAGGACAAAGCAGTGCGTAAGAGGATGTGTTGCCTCAC
CGTCACCCTCAGCGG-GCATGCCGCGACTGCCAAAGTCGTAGAGGGGGAGAATG-AGAGTGGGGAATGGAAGCTAGGG--
------CTAGACATTAGGGATCTGCGGTGGGAAATTGGCTGCGAATAGGTGTATAACAATTTGTTGGACCGCGGTTACAC
GAGAGGCTTGCAAGGTCCTTTTTGCAAAAGTTTTGATTCGGCAACTTCAATAGACGTCATGAACCGACGCCTCGTACGAG
TCAACCGCCCAGTCATCGGTTTAAACCCAGCCAGACCGATTTTGGACCACAGTGGCCGCGCAAGACAAGCGTGCCTCTTT
TCGTTGTCAACCAACCAGTCGTTGGATGAAAG-TGTACATACATGTCGAGTGCTAC-CAGTGTAATTTACTCTTTTAATT
TGTTC--------GAATAAGAAGTTTTAGAGAAGGGTATCAGCAAAAAAAAAAGGTTTTAGAGAAGAGAATGGTCCAATT
AGTAAGGG--------------------AAGCGCAAGCACCCCTC--------------AAGCAAAGCATCATCACCACA
AAATTAG------------------------------------CTGTGTGCGGGACCCACACTTCA-GCCC---------
-------------ACTACCGTCTCCCACCTGTGTACAGTCCACGCGAGAGACCAGCCCAGCCTACCCCCACCGATGGACG
CGGCGGCGGCGGCGGC------CGGCGGCCACCGCTGGACGGAGGAGGTGGACGACCTGGTGGACGCCGGGGACGTCGAC
GGCGCCATCTCCCTCCTCGAGTCTGTCGTCTCCAGCCTCTCCACCGCCGCCTCCCCGCCTCG---GGCGGGCGCCGATCT
CCGCCTCGCCACGGCGCTCGGCGACCTCGCCGGCCTCCACGCCTCCCGCGGCAACACGCTCCAGGCCGACGCCATCCGCT
CCCGCGCCATCGTCCTCCGCCTCCGCGCCCAGAAAGAAGCCCCCCAGCCCCAGGCCCTAGGGTTTGCTCCTCCTCCTCCC
CCAAGCTCTGTTCTTGCTTCTGAACCGAATCTTGGCCTGCTCGACCTGGACTTGCCAATTTGCAATTTTTTAGCTGTTTT
CTCTGTAAATTCGAGTAGCTTCTAGCTCGCGATCTCGTAGATGTCAGAGCACGGATCACGCAAATGTGGCACACGATCTG
AACAAACTCAGCTGCAGCTGCTCCCTGTTTGGGCCATCTGACCTGACTAACTCCTGCTCTGCTTCTGATAATGTACATTG
AAGGGATCATGCGGCAACGGAGAATTCTGCATCGCCGGAGGCTGCTACGGGATCCAAGGACTCGAAAGCCTCAGCTAGCG
TCGACAAGAAGGACGAAGATGAAGACGATGGTATTATTCTAGTGGCCTCTGTCTCTGTGCT-AAGCTGAAAACAGCTCAG
GCAAAACTGAGACATTAACATTCTTCCTCTGACGCATATGCAGATTGGGAGGCTATTGCGGACCGTGGCGACGAGACGCC
GGTGCGCCCCCTCGTGCAAGAGGCGAGGGTGACAACACCTTGTAGTTCTTCAGAGAAAAGTAGCACTTCATCTTCAGGGA
CCAAGAGGAGGGGAAGGGGTTCTTTTCTTTATGATAAGAGTGTTCTGTACAGCGACCAGTGCGCTTCAGAGAGGGATCTG
GATGACAAGGGGTCTGATCCAGCTCATGGTCGATCAAAGGGTCGTGCGGATGAGAAAGATAATAAGGATGGTAATTTATT
CAGGATGACTAGTCTTCTCTGTCTAGTTAGCTTGCTCATGGTGGGTAAACTAAACTCTTGTTCTTT-TGTTTGGTTTTGC
AGCTGCAAAACGATTTGGGACAAGGCATGCCCTTGTTCTTTACGACTTCCCACCTAGTACACGCACAACAGATTTGGAAA
GGATTTTTGAGAAGTTTGGAGACCATGGAGTTGCCATCCGCTGGGTCAATGATTCTGTTGCACTTGCAGTTTTCCGGACC
CCATCATCTGGTAATTTGATTCTGATAGTTACTTCTGATAATCTTTCTGCATGTTTCTTCGTATTCCATGATCTAGAAAC
TGTCGCCACATTCTTGTTTAACCTAGACTTTTGTATTATTGAAATGTATACGTACACAACTCCACCTATGGAAGCAAAGC
TCTGATGTCAAATAAGATGCATTGGACAAGCATTATTTCCATTTTCATAATTATTTCCTGCCGAAGGGCAGTTCCCCAGA
TTTTCATTGTGAGGGCA--------------------------CTAAATTAATAGAGGAAATCATTGTAATTCCTTTTTT
CCAATTAGGCCGCGTGGGACTTTGTTTATTTCGTGATATATGTGTAATTTTGATATCTATGAG-----AAAACATGACAG
TTATGAAGTCCAACCTAGATAGCAAAATGCATAATTGACTATTAGACTTTC-TTTATTGCTCAAGCTAT--ACTGTTGTG
CAGGTTCAGTGTTCTTCCATTGTTTTGGACCATAGAACTTTGTGCTGATTATATGAACTTGCAAGATTTCTAT-ACTTAT
GTTCCCTGGTTCTAATCGATGCATTCTGACCGCTTCATTCTGGCCTATTGACCTGTAGCTAACTGGTCACAAGCTTGTGT
GCTTCCC----ACAAAGTACAAAACATGATATG-------AAGTACAAATTGGCACACATCCCTTATTCCAATTAGGTTA
CGTGACACTTTGTTTATCTCATGATGTATGCGTAATTTTGATGCACGAGCATACAAAAAATGGTATTCCTGAAGTCCAAT
GCTGAAAGCAGAATGCATA---------------------ATAATTTTGTAGAAAGCAGAGTACATAATTTACTGTTAGT
CTTGGTTTATTGTTGAAGCTTATACTTTCATGCTGGTTCAGCG---TTTTCCATCCTGCTGGTACTTAGAACTTATGCTG
ATGATACGAACTTGCAAGGTCTCTGTACTTCTGTTTTCTGGCTTTATTGATTCTATTCTGGCCTATTGACCTGTTGGCCT
GTTGTCATGTACTCCTGTAGCTAAGGAGGCACAAGCTTCCGTGCCTCCAAGATACAAAGTACGGCCACTAAAGGATAATG
ACGATCTTTTGGCAAAAATCGATGGTACAGGTAACAGCTTGTTCCTTGTGATGATCCTTTTCAGTTTGATCTTCTTCTCC
CTAAGGATCATGTGTAGTTCATAGCTCATACCTTCCACCGTATGTTGTTTC-CATGTTGAACTGCAGACCTAGAACCGCC
GACGCCGAGGCCGAAGACGTCGGCGAGAACGGCGCAGAGGCTGATCGCCCACGGGATGGGACTAAAGCAGTTCACGACCA
TGGATGCAGGCGAGCGGAAAGAGCAGGAGGAGGCAAGGAGGAGCCGGATCACCGCCCGACAAGCTGCGCGCGACGATGCC
TGGGGTGAGGACTGAGGACTGCCTGGCTGTCCGAGAACTGCTGTCGCTGCCTGGCCTGCGCGGCGCCGCCTCCTGCCAGG
CTGCTCCCGGGCCTTGCTTTCTTACACGAGTGTGCTCCCGTTAAACCTCTGTGCTGGGTTTGTTTCACACGTGTCAGGGG
TGTGCTTGAATTACGTGTGGATGGTGTTGTTTGAGTGGTGATGCTGCCATCCCTGGATTCATTGGATTTTACTGTGGTTT
CCCACTCCCAGGATTGTGATGTCAGAGCTGCAGAGGTTGGGAGGCTGGTGTGGGAAAGAAAAATAAACCTTGTTTACAAC
AAATTAATGTACTCCCTCCGTCCACTTTTGTAAGTCGTTTTAGACAGCTCAAAATGTGCTGTTTTGCACATTGTCTGAAA
TGTCTTCAAGGTCTTATAAAAATGAACAGAGGGAGTAAGTGCTATGTGCCTAAAATGATTTACATGAATTTTTCTGGGAA
GCCATAAGACCAAGCAAGATTTCGGCTACCGGGAGA------------GGGACGTCTCACGTGGCGAGGAGTGCTCGAGC
TGCTGGGTTCCATCTTAGATTGTTCCCTCCAAT---GCCTCTCCTGCTGAAAGTGCGTCGCATGGTGTCGTTCCTGGCTG
AGGATCTAGCCATAGATGAGGCTGAGGTGCTTGAGCTCAAGGAACTTCTTGGCACGCCGCTGCCGAAGGAGCAACATGTC
AAGATCATTGTCGCGCTCGCTGTTGGGCAAGTCCTTGCGGCCGCACGCGGTGTTGCCAGAGACAAATATGAAGGTCAACA
TCAGGTGAGGCCTTTGTGGTCAGGTGGTCGATCCGGAGGGGCTGTGCTGGAATGTTCAGGGCCTGAATGAATAATCCAGC
TAAACACAAGGCCGTGAGGGAGATCGTTGAATTGGTGCGTGTAAATTTGGATAGGGGGTCCCGAGCTGGTAGCCTTGGCA
CGATGGTAACAAGACCGAGAGGGGACACAATGTTTACTTAGGTTTAGGCCCTCCCGAAGAGGTAAAACCC
>chr3D_299
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----------------------------------------------------------GTCACTATGACGAAGCATCACT
CGAGATCCGTCCATTCGAAGAGAGGGAGGAGTAGACGTAGATGAGGACAAAGCAATGCACAAGAGGATGCGCTGCCTCAC
CGTCAACCTTGGCGGAGCATGCCGCGACTGCCAGAGTAGTAGAGGAAGAGAAACAAGAGTGGCGAATGGAAGCTAGGTCT
AGGGCTCTAGGCATTAGGGATTTGCGATGAAAAATTGGGTGTGAATCGGTGTATAACCATTAGCTGGACTGCGGTTATAT
GAGAGGCTTGCAAGGTCCTTTTTGCAAAAGATTTGATTCAACAACTTTGATAAATGCCATGAACCAACGCCTCGTACGAC
TCAACAACCCCATCATCGGTTTTAACCCAACTATACCGGTTTTGGACCAAAGTGGTT------------CGTGCCAATTT
TCATAGTCAATG----AGGTGTTGGATGAAAGTTGTACATACGTGTTGAGTGCTACGCGGTGTAATTTACTCTTTTAGTT
CGTTTGATTGATTGAATAAGAAGTTTTAGAGAAGGGTACCCT---AAAAAAAAGGTTTTAGACAAGAAAATGGTCCAATC
ATGAGAAATTGATTC-GCAACTTTAGCAAAGCACAAGCACCCCTCAAAAACAAAAACAAAGCATA-----AAGCACCAAA
AAATTAGCTGTGACATGAACTTTGTAGCACG------ACACACCTGTGTGCGGGGCCCACACTTGA-GCCCCCGACTGCC
TGAGTTGCCTACCACCACCGTCTCCCATCTGTCTACAGTCCACGCGAGAGTCCAGCCCAGCCTACCCCCACCGATGGCCG
CGGCGG---------C------CGGTGGCCACCGCTGGACGGAGGAGGTGGACGACCTGGTCGACGCCGGGGACGTCGAC
GGCGCCATCTCCCTCCTCGAGTCCGTGGTCTCCAGCCTCTCCACCGCCGCCCCCTCGCCTCCGCCGGCGGGCGCCGATCT
CCGCCTCGCCACGGCGCTCGGCGACCTCGCCGGCCTCCACGCCTCCCGCGGGAACACCCTCCAGGCCGACGCCATCCGCT
CCCGCGCCATCGTCCTCCGCCTCCGCGCCGAGAAAGAAGCCCCCCGGCCCCAGGCCCTAGGGTTTGTTCCTCCTCCTATC
CCAAGCTCTGTTCTTGCTTCTGAACCGAATCTTGGCCTGCTCGACCTGGACTTGCCAATTTGGAAAAATTGTGATGTTTT
CTCTGTAAATTCGAGTAGCTTCTAGCTCGCGATCTCGTAGATAGCAGAGCACGAATCACGTAAATGTGGCACACGATCTG
AACAAATTCAGCTGCAGTTGCTCCCTGTTTGGGCCACCTGACCTGACCAACTCCTGCTCTGCTTCTGATAATTTACATTG
AAGGGATCATGCGACGGCGGAGAATTCTGCATCGCCAGAGGCCTCTACGGGATCTATGGACTCGAAAGCCTTGTCTAGCG
TCGACGACAAGGAGGGAGATGAAGATGACGGTATTATTCTAGTAGCCTCTGTCTCTGTGCT-GAGCTGGAAACAGCTCAG
GCAAAACTGAGACACTGACATTCTTCCTCTGACGCCTATGCAGATTGGGAGGCTATTGCGGACCGAGGCGATGAGACACC
GGTGCGCCCCCTCATGCAAGAGGCGAGGGTGACAACACCTTGTAGTTCTTCAGAGAAAAGTGGCACTTCATCTTCAGGGA
CCAAGAGGAGGGGAAGGGGTTCTTTTCTCTATGATAAGAGTGTTTTATACAGCGACCAGTGCGGTTCAGAGAGGGATCTG
GATGACAAAGGGTCTGATCCAGCTCGTGGTGGATCAAAGGGTCATGCGGATGAAAAAGATAATAAGGATGGTAATTTATT
CAGGATGACTAGTCTTCTCTGTCTAGTTGGCTTGCTCACGGTGGGTAAACTAAACTCTTGTTCTTTTTGTTTGGTTTTGC
AGCTGCAAAACGATTTGGGACAAGGCACGCGCTTGTTCTTTACGACTTCCCACCTAGCACACGCACAACAGATTTGGAAA
GGATCTTTGAGAAGTTTGGAGACCATGGAGTTGCCGTCCGCTGGGTCAATGATTCAGTTGCACTTGCAGTTTTCCGGACC
CCGTCATCTGGTAATTTGGTTGTTACACTTACTTCTAGTAATCTTTCTGTATGTTTCTTCGTATACCTTGATCTAGTAAC
TGTTGCCACATTCTTGTGTAACCTAGACTTTTTTATTATCGAACTGTACAAGTACACAACTCCACCTGTGGAAGCAAAGC
TTTGATGTCAAATATGGTGCATTGGACAAGCATTATTTCCATTTTCATAATTATTTCCGTCAGAAGGGCAGTTCTCCAGA
TTTTTTAGCTAAACTGTTATGATAGCTAACCATAACTCCATAGCTAAATTATTAGAGGGAACCATTACAATCCCCTTCTT
CCAACTCGGCTGTGCGGGACTTTGTTTGTTTCATGATATATGTGTAATTTTGATATGTGCGCTCAGTCAAAACATGACAG
TTATGAAGTCCAACCTAGACAGCAAA-TGCATAATTGATTATTAGTCTTTGGTTTATTGCTCAAGCTATTCACTGTCGTT
CTGGTTCAGTCTTTCTCCATTCTCTTGGACCTTAGATCTTTGTGCTGATCACATGAACTTCCAAGCTTTTTATTACTTAT
GTTTTCTGGCTTTAATCGATGCATTCTGATCGCTTCATTCTGGCCTATTGTACTGGAGCTAATGAGCCACAGGCTTCTGT
GCCTCCAAGATACAATGTGCAAAACATGATCAAAGAGAAAAAGTACAAATTGG-ACAGTTCCCTTATCCCAATTAGGTTG
CATTGTACCA--TTTATTTCATGATGTATGTGTAATGTTGATATGTGTGCATACAGAACATGGTATTT------------
CTACAGAGCAGAATGCAAAATTTAGTAGGGAGCAGAATTCATGATTTAGTAGAAAGCAGAATGCATAGTTTACTC-TAGT
CTTGGTTCATCGTTGAAGCTTATACTTTGATGATTGTTCAACCTTTTTTCCCATCCTGCTGAAACTTGAACTTCATGCTG
ATGTTATGAACTTGCAAGGTGTCTGTACTTCTGTTTTCTGGCTTTATTGATTCTATTCTGGCCTATTGACCTGTTGGCCT
GTTGTCATGTACTCCTGTAGCTAAGGAGGCACAAGCTTGCGTGCCTCCAAGATACAAAGTACGGTCACTAAAGGATAATG
ACGATCTCTTGGCAAAAATCGACGGTACAGGTAACAGCTTGTTCCTTGTGCTAATCCTTTTCAGCTTGATCTTCTTGTCC
CTAAGGATCGTGTGTAGTTCATAGCTCATACCTTCCACCTTATGTTGTTTC-CATGTTGAATTGCAGACCTAGAACCGCC
GACGCCAAGACCAAAGACGTCCGCGAGAACGGCGCAGAGGCTGATCGCCCACGGGATGGGGCTAAAGCAGTTCACGACCA
TCGATGCAGGCGAGCGGAAGGAGCAGGAGGAGGCGAGGAGGAGCCGGATCACCGCCCGGCAAGCTGCGCGCGATGATGCC
TGGGGTGAGGACTGAGGACTGCCTGGCTGTCCGAGAACTGCTGTCGCTGGCTGGCGTGCGCGGCGCCGCCTCCTGCCGGG
CTGCTCCCAGTCAAACCT-----------------------------------CTGGGTTTGTTTCACACGTATCACGGG
GGTGTTTAAATTACATGTTGATGGTGTTGTTTGAGTGGCGGTGATGGTATCCCTGGTTTCATTGGATTTTACTGTGGTTT
CCCACTCCCAGGATTGTAATGTCAGAGGTGCAGAGGCTGGGAGGCTGTTGTGGGAAAGAAAAATAAACCTTGTTTACCAC
AAATTAATT-----------------------------------------------------------------------
-----------------------------------TAAGTGCTATGTGCCTAAAGTGATTTACCTGAATTTTCCGGGGAA
GCCATAAGACCAAGCAAGATTTCGACTACTGGGAGAGGCACGTACTGCGGTACGTTTCACGTGGCGAGGAGTGCTCGAGC
TGCTGGGCTCCATCCAAGATTGTTCCCTCCATGGCGGCCTCTCCTGCTGAAAGTGCGTCGCTTGGTGTCGTTCCTGGCTG
AGGATCTAGCCATAGACGAGGCTGAGGTGCTT------------------------------------------------
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----------------------------------------------------------------------
>chr3A_656
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-------------------------CCCAGCAAGACCGGCTTTCGGCCAGAGCGATCGGGCAAGACAAGTGTGCATCTTT
TCCTTGTCAACC----AGTCGTTGGATGAAAG-TGTACATACGTGTCGAGTGCTAC-CGGTGTAATTTACTCTTTTAGTT
TGTTTGAAT-----AATAACAAGTTTTAGAGAAGGGTATCGG---TAAAAAAAAGTTTTAGAGTAGAGAATGGTCCAATT
ATGAGAAATTGATTCAGCAACTTTAGCAAAGCATAGGCACACCTCAAAAACAAAAGCAAAAGCAAAGCATAAGCAGCACA
AAATGAGCTGTGACATGAATTTTGTAGCATAAGACACACACACCTGTGTGCGGGGCCCACACTTCAGGCCCCCGACTGCC
TGAGTTGCCTACCACTAGCGTCTCCCACCTGTCTACAGTCCACGCGAGAGTCCAGCCCAGCCTACCCC-ACCGATGGACG
CGGCGG---------CGGCGGCCGGCGGCCACCGCTGGACGGAGGAGGTGGACGACCTGGTGGACGCCGGCGACGTCGAC
GGGGCCATCTCCCTCCTCGAGTCCGTCGTCTCCAGCCTCTCCACCGCCGCCCCCTCGCCTCCGCCGG---GCGCCGATCT
CCGCCTCGCCACGGCGCTCGGCGACCTCGCCGGCCTCCACGCCTCCCGCGGCAACACCCTCCAGGCCGACGCCATCCGCT
CCCGCGCCATCGTCCTCCGCCTCCGCGCCGAGAAAGAAGCCCCCCAGCCCCAGTCCCTAGGGTTTGTTCCTCCTCCTCTC
CCAAGCTCTGTTCTTGCTTCTGAACCGAATCTTGGCCTGCTCGACCTGGACTTGCCAATTTGCAAAAATTGTGATGTTTT
CTCTGTAAATTC---TAGCTTCTAGCTCAGGATCTCGTAGATGTCAGAGCACGAATCACGCAAATGTGGCACACGATCTG
AACAAATTCAGCTGCAGTTGCTCCCTGCTTGGGCCA-----CCTGACTAACTCCTGCTCTGCTTCTGATAATGTACATTG
AAGGGATCATGCGACGGCGGAGAATTCTGCATCGCCAGAGGCTGCTACGGGATCTAAGGACTCGAAAGCTTCAGCTAGCA
TCGACGGGAAGGACGAAGATGAAGATGATGGTATTATTCTAGTAGCCTCTGTCTCTGTGCTTAAGCTGGAAACAGCTC-G
GAAAAACTGAGACTTTAACATTCTTCCTCTGACGCATATGCAGATTGGGAGGCTATTGCGGACCGTGGCGACGAGACACC
GGTGCGCCCCCTCGTGCAAGAGGCGAGGGTGACAACACCTTGTAGTTCTTCAGAGAAAAGTAGCACTTCATCTTCAGGGA
CCAAGAGGAGGGGAAGGGGTTCCTTTCTTTATGATAAGAGTGTTCTGTACAGCGACCAGTGCGGTTCAGAGAGGGATCTG
GATGACAAAGGGTCTGATCCAGCTCATGGTGGATCAAAGGATCATGCGGATGAGAAGGATAACAAGGATGGTAATTTATT
CAGGATGACTAATCTTCTCTGTCTAGTTAGCTTGCTCATCGTGGGTAAACTAAACTCTTGCTCTG--TGTTTGGTTTTGC
AGCTGCAAAACGATTTGGGACAAGGCACGCCCTTGTTCTTTATGACTTCGCACCTAGCACACGCACAACAGATTTGGAAA
GGATCTTTGAGAAGTTTGGAGACCATGGAGTTGCCATCCGCTGGGTCAATGATTCTGTTGCACTTGCAGTTTTCCGGACC
CCATCATCTGGTAATTTGGTTGTTACACTTACTTGGAGTAGTCTTTCTGTATCTTTCTTCGTATACCTTGATCTAGAAAC
TGTTGCCACATTCTTGTGTAACCTAGACTTTTTTATTATCGAAATGTACAAGTACACGACTCCACCTGTGGAAGCAAAGC
TCTGATGTCAAATATGGTGCATTGGACAAGCATTATTTTCATTTTCACAATTATTTCCTGCAGAAGGGCGGTTCTCCAGA
TTTTTG-GCCAAACTGTTATGATAGCTCACCGTAAATCCATGGCTAAATTATTAGAGGAAACCATTGCAATCCCCTTGTT
CCAACTCGGCTGTGCGGGACTTTGTTGGTTTCATGATATGTGTGTAATTTTGATATGTGCGCTCAGTCAAAACATGACAG
TTATGAAGTCCAACCTAGACAGCAAG-CGCATAATTGACTATTAGTCTTTGGTTTATTGCTCAAGCTATTCACTGTCGTG
CTGGTTCAGTGTTCCTTCAGTCTTTTGAACCTTAGCT-TTTGTGCTGATCATATGAACTTGCAAGCTTTTTATTACTTAC
GTTTTCTGGCTTTAATCGATGCATTCTGATTGCTTCATTCTGACTTATTGCACTGTAGCTAATGAGCCACAGGTTTCTGT
GCCTCCAAGATACAATGTACAAAGCATGATTAAAGAGAAAAAGTACAAATTGACACAGTTCCCTTATCCCAATTAGGTTG
TGTTCCACCA--TTTAAATCATGATGTATGTGTAATGTTGATATGTGTGCATACAGAACATGGTATTTCTGAAGTCCGAA
CTACAGAGCAGAATGCATAATTTCGTAGGGAGCAGAATTCATGATTTAGTAGAAAGCAGAATGCATAATTTACTGTTAGT
CTCGGTTCATTGTTGAAGCTTATACTTTCATGCTTGTTCAACCTTTTTTCCCATCCTGCTGAAACTTGAACTTCATGCTG
ATGATTTGAACTTGCAAGGCCTCTGCACTTCTGTTTTCTGGCTTTATTGATTCTATTCTGGCCTATTGACATGTTGGCCT
GTTGTCATGTACGACTGTAGCTAAGGAGGCACAAGCTTGCGTGCCTCCAAGATACAAAGTACGGTCACTAAAGGATAATG
ACGATCTCTTGGCAAAAATCGACGGTACAGGTAACAGCTTGTTCCTTGTGCTAATCCTTTTCAGTTTAATCTTCTTCTCC
CTAGGGATCGTGTGTAGTGCATAGCTCCTTACTTCCATCTTATGTTGCTTTTCATGTTGAACTGCAGACCTAGAACCGCC
GACACCAAGACCAAAGACATCCGCGAGAACGGCGCAGAGGCTGATCGCCCACGGGATGGGGCTAAAGCAGTTCACGACCA
TCGATGCAGGTGAGCGGAAGGAGCAGGAGGAGGCGAGGAGGAGCCGGATCACCGCCCGACAAGCTGCGCGCGATGATGCC
TGGGGTGAGGACTGAGGACTGGCTGGCTGTCCGAGAACTGCTGTCGCTGGCTGGCGTGCGGCAT--CGCCTCCTGCCGGG
CTGCTCCCAGGCCTTGCTTTCTTACACGAGTTAGCTCCAGTCAAACCTCTGTACTGGGTTTGTTTCACACGTATCACGGG
GGTGCTTAAATTACATGTTGATGGTGTTGTTTGGGTGGCGATGATGGCATCCCTGGTTTCATTGGATTTTACTGTGGTTT
CCCACTCCCAAGATTGTAATGTCAGAGGTGCAGAGGCTGGGTGGTTGGTGTGGGAAAGAAAAATAAACCTTGTTT-----
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>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--S----S-S---S----S---
-S------------S-----------------S--S-S----------------S---SS---------S-S--------
-----S---SS----------------------S---S-------SS-----SS--------S--------------S--
----------S----------S----S--SS-------S--S----S----------S---S-S-----S-------S-S
------------------------------S--------SS------SS---S-S-S--------S-------------S
-----SS---SS----------S--------S------S----------S-----S--S---------------------
--S---------SSSS--------------------------S---------------S------------------S--
----S-----------------------------------S-SSS-----------------------------------
-SS-SSSS------------------------S-------------------------------------S-S-------
------------------------------------------------------S-------------------------
--------------------------------S-----------------S-----------------------------
------SSSSSSSSS-----------------------------------------------------------------
-----------------------S---------------------------S--S------S------------------
---------------------------------------------------------S----------------------
-----------------------------S------------------------------------S-----------S-
-----------------------------------------------------------------SSS--SS-S------
-----------------------------------------------------S--------------------------
------S----------S------------------S-------------------------------------------
-------------S-SS-------------------S-----------------S-------------------------
-----S-------------------S-----------------S------------------------S-----------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
---------------------------------------------------------------S----------------
--------S---------------------S------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------S-----------------------------S----------------------
----S---------------------------------------------------------------------------
------------------S--S-S-S-S--------SS-----------S--------------S--S------------
---S-------------S--------------S------S--------S-S----------------S------------
--------------S-S--------------------------------------------S------------S-----
----SSSSS-S-SSSSS----------------------------------S---------S-----S---S--S--S--
----S-S---S-S-S------------S----S-----------------------S-SS-SS-----------------
-------------------S------S------------------S----S-------------------------S---
-S------------S------S---------S----S------------S---------------S---S----------
---SS----S-S-----------------S--------------------SS----------SSS-S----S----S---
--S---S--------S--------------SSS------------------------SS--------S-----------S
---SS---SSSS-----S------------S-----S-----SSSS-S-------S--S--------S---------S-S
SSSS-S------------------------------------S----S------------S-S-----------------
-------S--------------------------S-----S-S------S-----------SS----SS-SS-S------
------S-------------------------------------------------------------------------
--------------------------------------S-------------------------S---------------
-------S--------------S---------------------------S-S---------------------------
---------S-----------------------------S----------------------------------------
------S--S--S--------S--------------------------------------S-------------------
-S-----------------S--------------S--------------------------------------S------
-------------------------------------------------S-----S---------------------S--
--------S----------------------SS-----S--S----------S-------------------S---S---
S------S------S---S-------------------S----S--S---------S-----------------------
-----------------S---------S--------S----------------------------------------S--
--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-------------------S--------S--------S-S-----
------------------------S----S--------------------S----S------------------------
-------S------SS---------------SS----------------------------S------------------
----------------S---------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_353
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------TCCGAAGAGAGGGAGGAGTG-----------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_2089
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------GGGGTCTGATCCAGCTCATG----------------------------------------------------
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----------------------------------------------------------------------
>forward_1696
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------ATTG
AAGGGATCATGCGGCA----------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3315
--------------------------------------------------------------------------------
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----------------------------------GGTTCAGCGTTTTCCATCCTG-------------------------
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----------------------------------------------------------------------
>forward_1697
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------TTG
AAGGGATCATGCGGCAA---------------------------------------------------------------
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----------------------------------------------------------------------
>reverse_3321
--------------------------------------------------------------------------------
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----------------------------------------GCGTTTTCCATCCTGCTGGT--------------------
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----------------------------------------------------------------------
>forward_2124
--------------------------------------------------------------------------------
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-----------------------TCATGGTCGATCAAAGGGTCG------------------------------------
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----------------------------------------------------------------------
>reverse_4171
--------------------------------------------------------------------------------
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----------ACTCCCTCCGTCCACTTTTG--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------
