>input_sequence_29568
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------------------------------------------------------ATGGCACCGCCGCGGCGCCTGTGCGT
GACCGGCGGCGGCGGGTTCATCGCCTCGTGGCTCGTCAAGCTGCTCCTCTCCCGCGGCTATGCCGTCCACGCCACCCTCC
GCGACCCATGTACGGACGCA-------------------GTTCGCCTCACGCCTGCGCAACCGGCCCCCCTTGCGATTGC
AGTTGATTCAGTTCCGTGTCATAGATGTGATTTGCATTCATTCA---------------------TCCATAGTCGTAAAT
CAATTAGAGTTCCGTGTCTAGATGAGCTTTGCATTCATTCATAGTTGAAAAATGTGAACCAATGTTCTGTGTCGTTATGT
TCTTTGCATTCATTCAT------GGTTGTTAAATGTTAATCAATCGGAGTTCCGTGTCCGCATGAAGAAAGCAGGT-TTT
AATTGATCCTGGGCGAAAGCGAATGG-----ATAAAACAAAGTGCTTAGTCCACGGGTAAG---------------TACA
GTGTTCTGATTAATGTCTGAATGCTCTTTCAGGTGACCCCAAGAATGTCCACCTCAAGCAGATGGACGAAGCCCGGGAGA
ATCTGCACCTGTTCAAGGCCGATGTGCTCGACTACGACACGCTAACACGTGCGTTTGAGGGGTGTGAGGGGGTCTTCCAC
CTCGCCACACCGGTGCCTGAAGATAAGATTGTTGATCCTGAGGCAGGTGTTCGTTCCAACTAATTCTTCGTTGTCGT-AA
AATCAGTTCATGTGCTGCTGTAGCTACATTATTTTGGTACAGTATACTGAACTTGTATTGATGGTAAAGCAGCATTGTGA
ATTATACCTAT---------------------------------------------------------------------
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----------------------------------------------TGTGAGTGTTGAACACTGTAGAATTGCTAGTACT
TTTCTCACCACAGTTTAAATGCATTTGTGCAGTCAGAAGTATTGGCTCCTGCTGTGAAAGGTACTTCAAATGTGCTGAAG
GCCTGCTCAGCTATGAAGGTTCAGAAGGTTATTGTCTTGTCATCCAATGCTGCTGTTGATTTTAACCCGAATTGGCCTCA
AGACAGACTCAAAGATGAGAGTAGCTGGTCAGACAAAGACTTCTGCCAGGAGAATGAGGTTAGAGATACTATTTAGTAAA
GAAAAATACCAAAGCACTATGTATACATCACAATTCATTGGTGGGCACACATGACTACTTTTCACGCGCGTCAT----TT
TTTTTCTCTGGTTCACTGTATTGATATGTGTTCTC---------------------------------------------
-----------AAC-AAAGAAAGTCTTCCCAGAGATAATTTCCACAAAGACTAAATTGTGACCTTTACTAATTTGTGCTT
GCAGGACTGGTATTCTGTCGCCAAGATTGTGGCTGAACAGGCATCCTTGGAATATTCAGAGAAACATGGATTAAACGTTG
TTACGCTTTGCCCTCCTTTAGTTTTTGGCCCATTGTTGCAGCCAACTGTGAATACAAGTAGCAAATTCTTAATCTATGTT
ATTAATGGTAATACTGATCTCTGTCCATCTGTTCTCTTTTATTGCCTGAAATTTCACATTAATAAATATCATGTTTGACT
TGGCAAGTTGGTTTAATCCAAGTCTATCTACCATTTGAGGAATGAATGTATTCCATATGTCCAACCAAAAGACTTTTGGA
TGTGGATCATACGGCTATCTGCTGTTAGATATAGATGAGATCATGCTGATAGTTCCTGTTGTTAGAT----ATAGATGGG
ATCAATCACATTGATAGTCCCTGTTGTTATATCGATCTGCTCTTTAAATTCAATCAGTGGAGAAGTCCAAT---TTTGTT
TTGGCACTGGTCATTATCTAGAACTTCTTGTTTGCAGATGATAACTAGGTTCCTCTCTTGGCACCTGTTTGTCCTCTGTA
TTCCT-------TTTCAACGATAGCTGCTATGCCTTTGTATGATGCTCTACAGCTGTGAGATGAGGGCATCCA-------
--TCCATAAGCTGATCCTTTACAACCTGTTGCATGTGCCTGCGCATTTG----ATACCGCATTCATTATCGATATTATGC
ACTGAACAGCGATT---GACAGAAGCACACAATGCCAAATTCCATGCTAGAATTGTTGAAGCGGCACCTTTGGCGTGTTG
TTGAAGTAAGCTTTTGGAAAATGAGTAGTCCTGAAATAAATGATAGTTTTCCTTCTTTTTTTTTTGAGATGGGGCCCTAG
TTCTCCCGTCTTATTCTTGCCGTCGCACACGGCAGAAATCTGTTATTGCAACATTGTGTCACATGGTAGACTCCATTAAC
TGGTACATTGTGTCACAATTCACAGGAGGCCCTGACGTGATGAGCAACAAGCTGTGGCACATTGTAGACGTCCGTGACGT
GGCGGACGCCTTGCTGCTTGTGTACGAGAAGCCAGAATCATCTGGGAGATACATTTGTTCGCCGAATAGCATCTGCGCAA
AGGACTTGGTGGACTTGCTGAGGAAGATGTACCCACAGTACAGCTATGTGAACAAGTAGGTTATCTCACCTCTCACGTTT
GCTCGGTCAGAACTTATCACACTGCACAATTACCCC-GC------------AGCCAGTTCATGATCTGAAGAAACCTTGC
TCTGCTTTTTACAGATTCGTTGACGTGGACCGTAAAGCGCCGCTGTCATCGCAGAAGCTGAAGGGTCTGGGCTGGAAGCC
GAGGAAGCTGGAGGAGACGCTCTCGGACAGCGTGGGCTGCTACGAGAAGGCCGGCCTTCTGCAGGGTTCCGCCGCGCGTC
CTTGCCGGCTCCCGCATCTGTTCCGTCTGGCTGGTGATCAGTGA------------------------------------
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----
>chr5A_1_TraesCS5A01G269200
CCATGGAAGTTGCATTTTA-TCTGTGTAAAACCATTGCATTCTTTTTTATTGGACAAAAAAAACGTTGCATTCTGACCGA
ACAAACACAAAGTTTTTTTTTAGATGAACACAAAGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNTA----------------------------------------------------
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-----------TTTTCAGCAGCGGGCCACTAGCCCGTCT-----------------------------------------
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CCGGTTCCTCCTCCTTTCCCGAGATTGATGAGCTCGGCCCAGTCACGTGGATGGGCTGTGCTGGGCCG------------
---------------------------TGGCTTCGCAGCCGTCGACCAGCGGTTGCCTCAAACAAAAAAAAAACATCGAC
CGGATGTGGCGCTGTAAAAAAATGGTTCCGATGGCGACGGCGTTCTTGACCCCAGGAACCCCGCAGTCCAAGCGACGGCG
GCGTCGTCGTCGTCGTCGGAGAAGGGAACAGGTGGCCGCGAGGTGCGTGTCTGCTCCACCGCTCCCTCCACATGTTTTTG
TTCCTCTCCGCACCGCTCTCCCGGACGAGTCCAAATCCGTTTTTGTTTCGGCGCGGATTTCCTAATCGATTTCCACGTCA
GGCTGCTAGTGCTACGA----------------------TTACTTTAGCCATTTGCTGCGCACATCTCGGTGAGCTCGCT
GTCACAGTGCACTGGTGGCGGCGGCGGCGGGCAGGACGAAGGG--------AAGATGGCACCGCCGCGGCGCCTGTGCGT
GACCGGCGGCGGCGGGTTCATCGCCTCGTGGCTCGTCAAGCTGCTCCTCTCCCGCGGCTATGCCGTCCACGCCACCCTCC
GCGACCCATGTACGGACGCA-------------------GTTCGCCTCACGCCTGCGCAACCGGCCCCCCTTGCGATTGC
AGTTGATTCAGTTCCGTGTCATAGATGTGATTTGCATTCATTCA---------------------TCCATAGTCGTAAAT
CAATTAGAGTTCCGTGTCTAGATGAGCTTTGCATTCATTCATAGTTGAAAAATGTGAACCAATGTTCTGTGTCGTTATGT
TCTTTGCATTCATTCAT------GGTTGTTAAATGTTAATCAATCGGAGTTCCGTGTCCGCATGAAGAAAGCAGGT-TTT
AATTGATCCTGGGCGAAAGCGAATGG-----ATAAAACAAAGTGCTTAGTCCACGGGTAAG---------------TACA
GTGTTCTGATTAATGTCTGAATGCTCTTTCAGGTGACCCCAAGAATGTCCACCTCAAGCAGATGGACGAAGCCCGGGAGA
ATCTGCACCTGTTCAAGGCCGATGTGCTCGACTACGACACGCTAACACGTGCGTTTGAGGGGTGTGAGGGGGTCTTCCAC
CTCGCCACACCGGTGCCTGAAGATAAGATTGTTGATCCTGAGGCAGGTGTTCGTTCCAACTAATTCTTCGTTGTCGT-AA
AATCAGTTCATGTGCTGCTGTAGCTACATTATTTTGGTACAGTATACTGAACTTGTATTGATGGTAAAGCAGCATTGTGA
ATTATACCTAT---------------------------------------------------------------------
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----------------------------------------------TGTGAGTGTTGAACACTGTAGAATTGCTAGTACT
TTTCTCACCACAGTTTAAATGCATTTGTGCAGTCAGAAGTATTGGCTCCTGCTGTGAAAGGTACTTCAAATGTGCTGAAG
GCCTGCTCAGCTATGAAGGTTCAGAAGGTTATTGTCTTGTCATCCAATGCTGCTGTTGATTTTAACCCGAATTGGCCTCA
AGACAGACTCAAAGATGAGAGTAGCTGGTCAGACAAAGACTTCTGCCAGGAGAATGAGGTTAGAGATACTATTTAGTAAA
GAAAAATACCAAAGCACTATGTATACATCACAATTCATTGGTGGGCACACATGACTACTTTTCACGCGCGTCAT----TT
TTTTTCTCTGGTTCACTGTATTGATATGTGTTCTC---------------------------------------------
-----------AAC-AAAGAAAGTCTTCCCAGAGATAATTTCCACAAAGACTAAATTGTGACCTTTACTAATTTGTGCTT
GCAGGACTGGTATTCTGTCGCCAAGATTGTGGCTGAACAGGCATCCTTGGAATATTCAGAGAAACATGGATTAAACGTTG
TTACGCTTTGCCCTCCTTTAGTTTTTGGCCCATTGTTGCAGCCAACTGTGAATACAAGTAGCAAATTCTTAATCTATGTT
ATTAATGGTAATACTGATCTCTGTCCATCTGTTCTCTTTTATTGCCTGAAATTTCACATTAATAAATATCATGTTTGACT
TGGCAAGTTGGTTTAATCCAAGTCTATCTACCATTTGAGGAATGAATGTATTCCATATGTCCAACCAAAAGACTTTTGGA
TGTGGATCATACGGCTATCTGCTGTTAGATATAGATGAGATCATGCTGATAGTTCCTGTTGTTAGAT----ATAGATGGG
ATCAATCACATTGATAGTCCCTGTTGTTATATCGATCTGCTCTTTAAATTCAATCAGTGGAGAAGTCCAAT---TTTGTT
TTGGCACTGGTCATTATCTAGAACTTCTTGTTTGCAGATGATAACTAGGTTCCTCTCTTGGCACCTGTTTGTCCTCTGTA
TTCCT-------TTTCAACGATAGCTGCTATGCCTTTGTATGATGCTCTACAGCTGTGAGATGAGGGCATCCA-------
--TCCATAAGCTGATCCTTTACAACCTGTTGCATGTGCCTGCGCATTTG----ATACCGCATTCATTATCGATATTATGC
ACTGAACAGCGATT---GACAGAAGCACACAATGCCAAATTCCATGCTAGAATTGTTGAAGCGGCACCTTTGGCGTGTTG
TTGAAGTAAGCTTTTGGAAAATGAGTAGTCCTGAAATAAATGATAGTTTTCCTTCTTTTTTTTTTGAGATGGGGCCCTAG
TTCTCCCGTCTTATTCTTGCCGTCGCACACGGCAGAAATCTGTTATTGCAACATTGTGTCACATGGTAGACTCCATTAAC
TGGTACATTGTGTCACAATTCACAGGAGGCCCTGACGTGATGAGCAACAAGCTGTGGCACATTGTAGACGTCCGTGACGT
GGCGGACGCCTTGCTGCTTGTGTACGAGAAGCCAGAATCATCTGGGAGATACATTTGTTCGCCGAATAGCATCTGCGCAA
AGGACTTGGTGGACTTGCTGAGGAAGATGTACCCACAGTACAGCTATGTGAACAAGTAGGTTATCTCACCTCTCACGTTT
GCTCGGTCAGAACTTATCACACTGCACAATTACCCC-GC------------AGCCAGTTCATGATCTGAAGAAACCTTGC
TCTGCTTTTTACAGATTCGTTGACGTGGACCGTAAAGCGCCGCTGTCATCGCAGAAGCTGAAGGGTCTGGGCTGGAAGCC
GAGGAAGCTGGAGGAGACGCTCTCGGACAGCGTGGGCTGCTACGAGAAGGCCGGCCTTCTGCAGGGTTCCGCCGCGCGTC
CTTGCCGGCTCCCGCATCTGTTCCGTCTGGCTGGTGATCAGTGAATGAACCGTGGTGGCTGGTGCTTTGTTTGTTTTATG
GTTGAACTTCTGTAAGCTGTTGTGTCGCTGGACGGAGTCTCGCAACAGCAACAATGGCCGAACACCACTAGTGGCTGGGG
CGTGCCAAATGCGCTATGCTTTGCTGCGTAACAGCGATGAAATAAATAAAATCTGTCCCTCGGCCTCCTCGTCCTGACGG
CCGCAATCCTGCTATATCTGCCACCCCTGTCTAAGGATGGCAATGAGGGACGATGCTTCGGTGCCATCTATCTTTGTGTC
TATGACATGTGAGCCCAACAGATGACTGACTCATATGTCAATGATCCAAAGGCAGGTGCCTTTTAAGGCACCGAAGCTGT
GTCCGGCAATGAGTAAGGTATGGGACGGATAGAGCAATACCATATCCATACGCATTTAGTTTTTTTACGGGTGATACACA
TTTAGTTAATGGGTACAAAACACTACCCATACCTGTACCCATGGGTATGAAATTTTACCCGTACCTATACCCGACGGGTA
CCCAAATCCATTGGGTACCCAACGGGTAGATCAAACAGTACACAAGTTATTCACAAATTTGCATTCATTTATAACACATT
TGGCAAAAAAAATCCATTGATCTCAACTCAATAATAGATAGATGAGTACATGACAATTATCTCAATTCAAATTGACAATT
GGTGACAAATTTAACATAGGTTCGTAAGCACACGACACAACTTTCACCTAGGTACACTTGTGAATCACGGGTAGGATTCA
CATGTCAGTATAAACGGGTAGGGTATGGATATATCCATGTATAAAGACTATACTCCTGCCCTATTCTTGACTTGACAGAT
AGGGTATAGAGACATATTCTTGACTTAACGGATAGAGTATGGATATTACCCGTGGGTATAAAATTATGCCCATACCTTGT
CCATGTGCGTATGATATCCGCTATGCATGGGTAAAATTACCATCCTTACCTTGTCTGACTGTAAAAAGGAACAAGATTTC
CCTC
>chr5D_3
--ATGGAAGTTGCATTTTGCTCTGTCTAAAAACTTTGCATTCTTTTCTTAACATAAAAGAAAACGTTGCATTCTGACCGA
ACAAACACAAACTTTTTTCCTAAAAGCTTAATAGTGCAGCTGCACTAATTGGGCGTTGCGAGCGCACGCAGTACACGGCA
AAAAGCTCACACTACAAAAATAGTAATTAGCATTCTGTGTCATCATTACACTACGGAAAAGAAAAGTACCTATTCCTGAT
CTTGTTGACGCTGCCTACTTTACACAAATCAGTCAAGAAAGAATATGTACGTGCATTTATTTGGGCTTAATAAAATTTTA
AAAAGCCATAACTTTTTATTCAAGTATTGGAATTCAGATTCATTTTCATCATTGGGCTTCTCGCGACGAGTTCTTCAAAA
CTAGATCCCATATGGATATGTTTCAACAAACTTTCTGTTTTGAGCAACTTTGCGTGTTAAAAAGGCAACTTTAGTGCTAT
AGGAAATCAACTTCTTCGTAGTTTGCCTACTATGATTGCCTATCAACGAGAAGTCATTATAAGTTGCCTCCCATGACTAT
CTTGTTCACTAAATTCACGTATAAGTTGTCCCCAAATGCTTATTAGTGCTACTGCAATATTTGGAGACGTCGAGCGCACC
CTCCCAAGCCATTCGATTTGGCACAAATCGCGCGCAAATGCTTTCTTGTCTAGTGTGGTGACCGAAGGTATGGTGAGGCC
CCTTCCAAAAAATAGAAAAGAGATAATCACTGCAGATCGTGGAAGAGCCGCCCCCACCCCCACCCCATTTTTCTGTTGGT
TACCGTCGAAGAGATGAAGGGAGAAATGGGAGGGGATTCACTCGTGCCCCACCGTGATTCTCCATCGGAGGGAGGCAGCA
GGCGACCTCGGCGACCACCCAAATCACGGTTGGATTTCGGAAAAACTATCACACAACAAAAGCAACAAAAACACACAGAA
AAAATACCTGGATCCCCTTTCTTATGCACAATACATGAAAGATAACATAGTTGCCCACAATTAACCATACAGTTGCCTAA
AATCATGTATCCCATTGCCCAATCCTCATGAACAGAAACATTACAAAGACCACGATTTTGGCCAATATCTAAAGGTTTTA
GATACCTTCAATTAAGTTTGTGTCACGGCGGTGTGTCAAGAATTTCTTCTCTTCGGGGCCGGTGGGATCCAATGGTATGA
TCGTAAACACTTGGCGAATGATCATAGAGGGTGGCGGGGTGGAGTTGGTCATGGGGACATAACTAAAACCATGAAGTTTT
TTTTATAGGATTAAATTTATCTGTGAACCCCTAAAAAACTAACATGTGTATGTTCATTATCACTTTTTCATGTGCCATAG
TTGCCCACAATCAGCTATACAATTGCCTAGAACCATGTATTCAGTTGCCCAATCCTCAATAATAGAAACATTACCAAGTC
CATAATTTGGCTACTATGTAAAGGTTTTAGATACCTTTCAATTAAGATTGTGTGATAGAGATGCATCAAGAATTTCATCT
CCTTGGGGTTGGATCCCCTGGTATGATCGTAAATACTTGGTGAAATGATCATAGAGGGGGAGCGGTGTGAGCTGGTCATG
GGGACATAAATAAAATCACGAAGTGTTTTTAGAGGATAAGAAACTTCATAATATTGTAGGCAACTAATTTGCAAAGTTAG
ACAACTAAGAAGCAATGGTAGGTAACTAATTATCAATGGCAGGTAACTCGACATCAATATTAGACCAATTTCATAGTATT
GTAGGCAACTGGGCATCAATAATAGGCAACTGAATATCCATGGTAGGCAAGTGAGCAACCATGGTAGACAAGTTATGATA
ATGTTAACCAAATTCATTGATACACATGGTGCAATGAAGTTACTTATATGTATCTCTAAAGGTGCATCATGGTTTGTGTG
ATTTTCTCATTTTTACACAAACCAACCTAATAGGCGGTCCTACTAGGCAAAAAAATGAAGTTACTTTCCTGTAGCACTAA
AGTTGTCTTCATCGTACTCAAAAGTTGCCTAAAAAAATTTGACGAAACCTATCGATATGAGATCTAGTTTTGAAGAACTC
GTCGCGAGAAACCCAGTTGTGAAATGGAAATTGAATTTCGACGCTTAAATTAAAAGTTACAGTTTTTTAAACTTTTTGGA
CCCCAAATAAGTGCACGTAGGGATAAGATTCCTTTTTTAATGAACAATGTCGTGCGCGTCAGCTGCTCTTTCCTTATTTG
AAGGAGCGCTAGATCATACCAACGGGCGCTCGGGCGCCGACTAGCCACATCCAACTTTTTTTTTGGAAAACAAAAGGAAA
ACTTCATGGTTTTTTCAGCAGCAGGCCACCGGCGCGTCTCCGGTTCCTCGAAATCACTAATTAAGGAGTACTCGTTGCAA
AGAATACTCCACCTTCCGAGGTCGCGACAAGTGGCGCACATGCAGCGCGCTACTTGTCGCAACCTGAGAGTTTTCTCTTT
TTTCGTAGATCCGTTTATTCAAAACGTTTTATCTCTTAAACCGTGCGTCCAAATCTCGAACCGTTTTCACCATTGGATTC
CTCACGTCGAGATCTTCAAAACTAGATCACACGTTGATAGGTTTTGACGAACTTTTTTTTCATGAAAAAACCGACGAAAA
AACCGAACCGGGAGCACGGTTTTTTCCCTTTCAAAAAGAGGCACACCCATGCCTCTCGCGAAATCACAACCATGCCTCTC
ATGGTAGCAAAACCGTGACCCTCGTGGAAAGGAAAAAAAAACAGAAAACGCGGTTTTTTTCGTTTTCGAGAGGCACGGCC
GTGACTCTCGCGAAAGCACAACCGTGCCTCTCGCGAAAGCAAAACCGTGCCTCTCGCGAAAGNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNCGCGAAAGAAAAAAAAAACAGAAAATGCATATTTTTTTCCTTCCGAGAGGCACGGCCGTGACTCTC
GCGAAAGCACAACCGTGCCTCTCGCGGAAGCAAAAGCGTGACTCTCGCGAAAGAAAAAAAACAAAAAACGCGTTTTGTTT
TTCCCTTTCCGAGAGGCACGGCCGTGACTCTCTCGAAAGCACAACCGTGCCTCCCGCGGAAGCAAAACCTTGACTCTCGT
GAAAGAAAAAAACAGAAAACGCGTTTTTTTTTGTTTCCGAAAGGCACCGCCGTGACTCTCGCTAAAGAACAACCATGCCT
CTCACGGAAGAAAAACCGTGACTTGCGTGAAAAAAAAAGAAAACGCGTTTTTTCGCGCAAAAAAATGTTTTTTCAAAAAA
AAAAGATCGAATAGCTAAAGAAGACCGGGGGAAAACCAAAACGTCGAAAAACCCGAAAAAAATCATTTAAAAAGCCAAAA
ACGCGTGCGGAAAAATAAAAATAAAATAAAATCCGGAGAGAGCGTCCACAGCGCGACACGTGGCGAACGGCTGAGAGCGC
GCCAAGTGGCGCTGATCGTTGCGAGGCTCCCGAAGGAGCGCTCGTTCACTTTTTTTTGAGGGGTGGAGCGCTTTGCTTTC
CCGGTTCCTCCTCCTTTCTCGAGATTGATGAGCTAGGCCCAGTCACGTGGATGGGCTGTACTGGGCCG------------
---------------------------TGGCTTCGCAGCCATTGACCAGCGGTTGCCTCAAACAAAAAAAAAACATCGAC
CAGCGGTGGCGCTGTAAAAAAATGGTTCCGATGGCGATGGCGTTCTTGACCCCAGGAACCCCGCAGTCCAAGCGACGGCG
GCGGCGTCGTCGTCGTCGGAGAAGGGAACAGGTGGCCGCGATGTGCGTGTCTGCTCCACCGCTCGCTCCACGTGTTTTTG
TTCCGCTCCGCACCGCTCTCCCGGACGAGTCCAAATCCATTTTTGTTTCGGCGCGGATTTCTTAATCGATTTCCACATCG
GGCTGCTAGTGCTACGACCTGCTACTTCCAGTTCTGCGTACTTT------------------------------------
---ACAGTGCACTGGTGGTGGCGGCGGGCAGGAGGAAGAAGGGCAGGAGGGAAGATGGCACCGCCGCGGCGCGTGTGCGT
GACCGGCGGCGGCGGGTTCATCGCCTCGTGGCTCGTCAAGCTGCTCCTCTCCCGGGGCTACGCCGTCCACGCCACCCTCC
GCGACCCATGTACGTACGGACGCAGCCGCCCGTCGACCTGTTCGCCTCACGCCCGCGCGACCGGCCCCCCTTGCAATTGC
AGTCGATTCAGTTCCGTGTCATAGATGTGATTTGCATTCATCCATAGTTGTAAATCAATCAGAGTTCAATAGTTGTAAAT
CAATCAGAGTTCCGTGTCTAGATGAGCCTTGCATTCATTCACAGTTGGAAAATGTGAACCAGTGTTCTGTGTCGTCATGT
GCTTTGCATTCATTCATATTCATGGTTGTTAAATGTTAATCGATCGGAGTTCCGTGTCCGCATGAAGAAAGCAAAGGTTT
AGTTGATCCTGGGCGAAAGCGAATGT-----ATAAAACAAAGTGCTTAGTCCACGGATAAGCCAAGGTGGGAGCTGTATA
GTGTTCTGATTAATGGCTGAATGCTCTTTCAGGTGACCCCAAGAATGTCCACCTCAAGCAGATGGGCGAGGTCCGGGAGA
ATCTGCACCTGTTCAAGGCCGACGTGCTCGACTACGACGCGCTAACACGTGCGTTTGAGGGATGCGAGGGGGTCTTCCAC
CTCGCCACTCCGGTGCCTGAAGATAAGATTGTTGATCCTGAGGCAGGTGTTCTTTCCAACTAATGCTACGGTGTCTGAAA
AATCAGTTTGTGTGTTACTGTATCTACATTATTTGCTAC-AGTACT--GAGCTTGTATTGACACTGAAGCAGTATTCTGA
ATAATACCTATTGGCA--CGTGTCGCTCTTTAACGGAT-AATGCACTTCTCGATCCCACATAATTTGGCAATTTTTGGTT
CTTGCAAAGCTAGGCTCATCGTAATGTATGTTTGCAA-TACTGGCTCCTGGAGAACACTTGCACATCATATTATAGCATT
GGGAGTAATTAGTGCAATGTACATAGTAGATTGCTATGTGCTTTCGCCTTTGTGTGCTAACATTTTTAGATTATCAAAGT
GTTAGAAGTGCGTGTTGTCAGGATGCATTTCG------------------------------------------------
--TCTCACCACAGTTTAAACGCATTTGTGCAGTCAGAAGTATTGGCTCCTGCTGTGAAAGGTACTTCAAATGTGCTAAAG
GCCTGCTCAGCTATGAAGGTTCAGAAGGTTATTGTCTTGTCATCCAATGCTGCTGTTGATTTTAACCCGAATTGGCCTCA
AGATAAACTTAAAGACGAGAGTTGCTGGTCAGACAAAGACTTCTGCCAGGAGAACCAGGTTAGAGATGCTATTTAGTAAA
GGAAATTTCCAAATCACTATGCACGCGTCACAATTCTTGGCAGGCACAGGAGTACAA-----------------------
--TTTTTCTGGTTCCGTGTTTGCTCTTTTGAAAGGCACATGAGTACAACTTAAAGATGTAGTGTTTGCTCTTTTGAAAGG
CTTGTACCCGTAACAAAAGAAAGTTTTCTTAGGGATAATTTCCACGAAGACTAAATTGTGACCTTTACTAATTTTTGCTT
GCAGGACTGGTATTCTGTTGCCAAGATTGTTGCTGAACAGGCATCCTTGGAATATTCAGAGAAACATGGATTAAACGTTG
TTACGCTTTGCCCTCCTTTGGTTTTTGGTCCATTGTTGCAGCCTACTGTGAATACCAGTAGCAAATTCTTAATCTATGTT
ATTAATGGTAATACTGATCTCTATCCATCTGTTCTCTTTTATTGCCTGAAATTTCACATTAATAAATATCATGTTTGACC
TGGCAATTTGGTTTAATCCAAGTCTATCTACCATTTGAGGAATGAATGTATTCCATATGTCCAACCAAAAGACTTTTGGA
TGTGGATCATACGGCTATCTGCTGTTAGATATGGATGAGATCATCCTGATTGTTCCTGTTGTTAGATATAGATAGATGGG
ATCAATCACATTGATAGTCCCTGTTGTTATATCGATCCGCTCTTCAATTTCCATCAGTGGAGAAGTCCAA--TTTTTTCT
TTGGCACCGGTCATTATCTAGAACTTGTTGTTTGCAGATGATAACTAGGTTCCTCTCCTGGCACCTGTTTGTTCTTTATA
TTCTTTTTCAAATTTCAACGATAGCTGCTATGCCTTTGTATGATGCTCTACAGCTGTGAGATGAGGGCATCCA-------
--TCCATAAGCTGATCCTTTACAACCTGTTGCATGTGCTTGCGCACTTGATATATACCACATTCATTGTCGATATTATGC
CCTGAACAGCGATCGACGACAGAAGCACACAATGCCAAATTCCGTGCTAGAATCGTTGAAGCGGCACCGTTGGCGTGTTG
TTGAAGTGAGCTTTTAGAAAATGATTAGTCCTGAAATAAATGATAGTCTCCAGTAACTCTTTTGATGTTTGTGCT-----
-------GTCTTATTCTTGCTGTTGCACGCTGCATAAATGTGTCTGCATGATTGTACTGAA--------ACTCCGCAAAT
CGGTACATTGTGTCACAATTCACAGGAGGCCCTGACGTGATGAGCAACAAGCTGTGGCACATTGTGGACGTCCGTGACGT
GGCGGACGCCTTGCTGCTTGTGTACGAGAAGGCAGAATCGTCCGGGCGATACATTTGCGCGCCGAATAGCGTCTGCACAA
AGGACCTGGTGGACCTGCTGAGGAAGATGTACCCACAGTACAGCTATGTGAACAAGTAGGTTACA-----TCTCTCGTTC
GCTCGGTCAGAACTTGTCACACTGCACTGCACAATTATCCTGCAGCCAGTAAGCCAGTTCATGATCTGAAGAAACCCTGC
TCTGCTTTT-ACAGCATCGTCGACGTGGACCGTAAAGCGGGGCTGTCATCGCAGAAGCTGAAGGGTCTGGGCTGGAGGCC
GAGGAAGCTGGAGGAGACGCTCTCGGACAGCGTGGGCTGCTACGAGAAGGCCGGCCTTCTGCAGGGTTCCGCTGGGCGTA
ATTGCCGGCTTCCGCATCTGTTCCGTCTGGCTGGTGATCAGTGAATGAACCGTGGTGGCTGGTGATTTGTTTGTTTTATG
GTCGAACTTCTGTAAGGTGTAGTGTCGCTGGACGGAGTCTCGCAACAGCCACAATGGTCGAACA----------------
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>chr5B_507
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-----------TTTTCAGCAGCAGGCCACTAGCCCGTCT-----------------------------------------
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CCGGTTCCTCCTCCTTTCTCGAGATTGATGATCTAGGCCCAGTCATGTGGTTGGGCTGCACTGGGCCGACGATTATCGTG
CCGTCGACCAGCAGACAGAGCGCGGCTTGGCTTCGCGGCCATCGACCAGCGGTTGCCTCA----AAAAAAAAACATGGAC
CAGAGGTGGCGCTGTAAAAAAATGATTCCGATGGCGATGGCGTTCTTGACCCCAGGAACCCCGCAGACCAAGCGACGGCG
GCGGTGACGGCGGCGGCGGCGTCGG----AGGTGGCCGCGAGGTGCGTGTCCGCTCCACCGCTCCCTCCACGTGTTTTTG
TTCCTCTCTGCACCGCTCTCCCGGACGGGTCCAAATCCATTTTTGTTTCGGCCCGGATTTCTTAATCGATTTCCACACCA
GGCTGCTGGTGCCACGACCTGCCACTTCCAGTTCTGCTATTACTTTAGCCACTTGCTGCGCACATCTCGGTGAGCTCGCC
ACTCC--------GGTGGCGGCGGCGGCGGGCGGAGGGAAGAAA----------ATGGCACCGCCGCGGCGCGTGTGCGT
GACCGGCGGCGGCGGGTTCATCGCCTCGTGGCTCGCCAAGCTGCTCCTCTCCCGCGGCTACGCCGTCCACGCCACCCTCC
GGGACCCATGTACGGAC-------------------------------------------------------------GC
AGTTGATTCAGTTCCGTGTCATAGATGTGCTTTGCGTTCATTCATACAGTAC--------------------TTGTAAAT
CAATCAGAGTTCCGTGTCTAGATGAGCTTTGCATTCATTCATAGTTGAAAAATGCGAAACAATGTTCTGTGTCGTCATGT
GCTTTGCGTTCATTCAT------GGTTGTTAAATGTTAGTCGATCGGAGTTCCGTGTCCGCATGAAGAAAGCA-AGGTTT
AACCGATCCTGAGCGAAAGCGAATGTAGAGCATAAAACAAAGTGCTTAGTCCACGGATAAGCCAAGGTGGGAGCTGTATA
CTGTTCTGATTAATGGCTGAATGCTCTTTCAGGTGACCCCAAGAATGTCCACCTCAAGCAGATGGACGAGGCCCGGGAGA
ATCTGCACCTGCTCAAGGCCGACGTGCTCGACTACGACGCGCTAACACGTGCGTTTGAGGGATGTGAGGGGGTCTTCCAC
CTCGCCACTCCGGTGCCTGAAGATAAGATTGCTGATCCTGAGGCAGGTGTTCTTTCCAACTAATGCTTCGGTGTCTGAAA
AAACAGTTTGTGTGGTGCTGTATCTACATTATTTGGTAATAGTACC--GAGCTTGTATTGATAGTGAAGCAGCATTGTGA
ATTTTACCAATTGGCACGCGTTTCGCTCTTTATCAGATAAATGCACTTTTCAGTCCCATGTAATTTGGCGATTTTTGGTG
CTTGCAAAGCTAGGCTCACTGTAATGTATGTTTGCAAATACTAGCTCCTGAAGAACACTTGCACATCATATTATAGCACT
GGGAGTAATTAGTGCGATGTAAATGCTAGATTGTTATGTGCTTTCACCTGTGTGTGCTAACAATTTTAGATTATCAAAGT
GTTAGAAGTGCGTGCTGTCAGTGTCAGGATACTTTCTTGTTGGCATTGTGAGTGTTGAACACTGTAGGATTGCTAGTACT
TTTCTCACCACATTTTAAATGCATTCTTGCAGTCAGAAGTATTGGCTCCTGCTGTGAAAGGTACTTCAAATGTGCTGAAG
GCCTGCTCAGCTATGAAGGTTCAGAAGGTTATTGTCTTGTCATCCAATGCTGCTGTTGATTTTAACCCGAATTGGCCTCA
AGACAGACTCAAAGATGAGAGTAGCTGGTCAGACAAAGATTTCTGCCAGGAGAATGAGGTTAGGGATACTATTTAGTAAA
GAAAAATTCCAAAGCACTATGTATACATCACAATTCATTGGTGGGCACACATGACTATATTTTCACACATGTCGGTTCTT
TTTTTTTCCAGTTCGCTGTATTGATACGTGTCCTC---------------------------------------------
-----------AACGAAAGAAAGTCTTCCTAGAGATAATTTCCACAAAGACTAAATTGTGACCTTTACTAATTTGTGCTT
GCAGGACTGGTATTCTGTTGCCAAGATTGTGGCCGAACAGGCATCCTTGGAATATTCAGAGAAACATGGATTAAATGTTG
TTACGCTTTGCCCTCCTTTGGTTTTTGGCCCATTGTTGCAGCCTACTGTGAATACCAGTAGCAAATTCTTAATCTATGTT
ATTAATGGTAATGCTGATCTCTGTCCATCTGTTCTCTTTCATTGCCTGAAATT-CACATTAATAAATATCATGTTTAACT
TGGCAAGTTGGTTTAATCCAAGTCTATCTACCATTTGAGGAAT-------------ATGTCCAACCAAAAGACTTTTGGA
TGTGGATCATACGGCTATCTACTGTTAGATATGGATGAGATCATCCTGATTGTTCCTGTTGTTAGATAAAGATAGATGGG
ATCAATCACATTGATAGTCCCTGATGTTATATCGATCTGCTCTTCAATTTCAATCAGTGGAGAAGTCCAATTTTTTTTTT
TTGGCACCGGTCATTATCTAGAACTTGTTGCTTGCAGATGATAACTAGGTTCCTCTCCTGGCACCTGTCTGTCCTTTATA
TTCTTTCTCAAATTTCAACGATAGCTGCTATGCCTTTCTATGATGCTCTGCAGCTGTGAGATGAGGGCATCCATTCTGAC
CATCCATAAGCTGATCCTTTACAACCTGTTGCATGTGCTTGCGCACTTG----ATACCACATTCATTGTCGATATTATGC
CCTGAACAGCGATTGACGACAAAAGCACGCAATGCCAAATTCCGTGCTAGAATCGTCGAAGCGGCACCTTTGACGTGTTG
TTGAAGTAAGCTTTTAGAAAACGATTAGTCCTGAAATAAATGATAGTCTCCAGTAACTCTTTTGATG-TTGTGCT-----
-------GTGTTATTCTTGCTGTTGCACGCCGCAGAAATGTGTTTGCACGACTGTACTGAA--------ACTCCACAAAT
TGGTACATTGTGTCACAATTCACAGGAGGACCTGACGTGATGAGCAACAAGCTGTGGCACATTGTAGACGTCCGTGATGT
CGCGGATGCCTTGCTGCTTGTGTACGAGAAGGCCGAATCGTCTGGGAGATACATTTGCGCGCCGAATAGCGTCTGCACAA
AGGACTTGGTGGACTTGCTGAGGAAGATGTACCCACAGTACAGCTATGTGAACAAGTATGTCA-----------------
--TCGGTCAGAACTTATCACACTGCACAATTATCTCTGC------------AGCCAGTTCTTGATCTGAAGAAACCCTGC
TCTGCTTTT-ACAGCA---TCGACGCGGACCGTAAAGCGCCGCTGTCATCGCAGAAGCTGAAGGATCTGGGCTGGAAGCC
GAGGAAGCTGGAGGAGACGCTCTCGGACAGCGTGGGCTGCTACGAGAAGGCCGGCCTTCTGCAGGGTTCCGCTGCGCGTC
ATTGCCGGCTTCCGCATCTGTTCCGTCTGGCTGGTGATCAGTGAATGTACCGTGGTGACTGGTGCTTTGTTTTCA-TATG
GTCGGACTTCTGTAAGCTGTAGTGTCGCTGGACGGAGCCTCGCAACAGCAACAATGGTCGAAC-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
>SNPs
SS----------------S------S-----S-S------------S-SSSSSSS---S---------------------
-----------S------SS--S-S-SSS-SS-SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------------------------
--------------------------------------------------------------------------------
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----------------------S---------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S---------------S------------------------S--------------------
----------------------------------------S---------------------------------------
-S--S--------------------------------S------------------------------------------
---S-------------------------------------------------------------------S--------
--------------------------------------S----------------------S--------------S---
---------------------------------------------------S---------------------------S
SSS---------------------------------S-----------------------------------S-------
------------------------------------------------------------S-------------------
------------------S----------------------------------S----S---------------S-----
-------------------------------------------------------------------S-----S------
----S----------------------------------------------------------------------S----
S----------------------------------------S-------------------------------SSS----
-------------------------S------------------------------S---------------------S-
---------------S-----------------------------------------------------S----------
----------------------S---------------S----------------------S------------------
--------S-------------------------------------------S-----------S-----S----SS---
--------SS----S-------S-----------S-SS-S----SSSS--S-----------S--S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------S------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------S-------------------------------------------------SS---SSSSSSSSSSSS------
-----S--------S----------------S------------------------------------------------
-----------------------------S--------------------------------------------------
------------------S-------------------------------------------------------------
-------------------S-----------------------S-----------S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------S-----S-----------------------------
--------------------------------------------S--S-----------------------------S--
-------S------------------S------------------------------S-----------------S-S--
---S----------------------------------------------------------------------------
--------------------------------------S------S------------S--------S------------
S------------------------------------------S---------S--------------------------
---------------S--------S----------------------S-S-SS-SSS-S----SSSSSS--S-SSSSSSS
SSSSSSS-------------S--S----S-S--------S----SSSS-S--SS-SSSSS-SSSSSSSS------SS--S
--------------------------------------------------------------------------------
-------------------------------S-------S-----------------SS-----------S-----S---
---------------------------------------------------------------SSSSSSS----S----S
--------------------------------S-S-----------------------------------------S---
---------S----SS----S-----------------------------------------------------------
------------------------------------------------------------------------S-------
S---------S---------------------------------------------------------------------
--S-----------------S------------------------------------S------SSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS
>forward_3878
--------------------------------------------------------------------------------
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------------------AAAATGGTTCCGATGGCGAC------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4823
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----------------------TGTGCTCGACTACGACACG---------------------------------------
--------------------------------------------------------------------------------
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>forward_4636
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--------------------------------------------------------TCCGCATGAAGAAAGCAGGT----
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>reverse_6951
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----------------------------------------------------------------------ATCTGCGCAA
AGGACTTGGT----------------------------------------------------------------------
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----
>forward_5672
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----------------------------------------------------GACTACTTTTCACGCGCGTC--------
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----
>reverse_7035
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--------------------------------------------------------------------------ACGTTT
GCTCGGTCAGAACT------------------------------------------------------------------
--------------------------------------------------------------------------------
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----
>forward_6398
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----------------------------------------------------------TGGCACCTGTTTGTCCTCTG--
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----
>reverse_7553
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--------------------------------AAGGATGGCAATGAGGGACG----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----
