>input_sequence_29500
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--------------------------------------------------------------------ATGGCGGCGGAA
GGCAAGGTCCCGACGCTGGCCGAGGTAAGGGAAACCACACCCCCATCCGTATGCACTCTGCCCTCTTATTAGCTTAGGGT
TTCCCTATGTGATTACGCGGCCGCTCCGGGGGATCGGTGCCGTGCCCCGGCCAGATCCGGCGATTTTTATCACCCCGTGG
CCGGATTTGGGCCGAGAGATGGAAGTAGAATCGCACTGGTAGGTTTAGGGGTCAAGTGCCAGTGGCTTCTGTGTTTGCGA
TTGGAGCTGATTGGGTTATAATTGATGTTCGCTGCTGTCGAAATAACCTCATCCAGG-----------------------
-------------------------------------TTCTGTGCCGTCAGATTTTGTTGTTATTCTGCGCTACTTTGGT
GCGCACGAAGACACCGCTCCATAGAATTTGGCAGATTTTCATAGGTTCGGAAGAGAGCAGTGCCTGTTTTGGCTTTACAA
CAATTTTTAGTTGCCTGAGTTGTAGAGTTGGATTGATGTTATGCTTTTATATTTTTGTGTGTTGTATACACTGTTGTATA
TGATTTGCTAGTGTGACACTATTTCTGTAATTACAAGTAAAAGTGAC--TGTGATCTTCATCCTTCCCCCCTATGGAGGT
GGTGGTTGAGATTATAGTTGAACCTTTTC---CATGCATAAAAATGTATAACCCGTGAACCACTGCAACTGAGAACATGA
GCTGTACTTGTAAGGTTGGAGGTGCTTGCATCTGTTCCTTGCTCCTGCACCAGTTAATATGATGTATGAACTCATGCCGA
TCATCTGCTTGCTTAGATTTGGAGCCGTATACAAGAGATTTGTTAGCCTGC-GATTGGATCCCTAGCATGAATTTTAATT
TCTGTATTTTTGTG--TGCTCATTTCATGAATCAAAGCTGACTTCTCTGTCGCTAGTTGTTCATACTGAAATTGATATTT
CATGCTCCAGACCTAGTTTTGAGAACTTGAAATCCGCCCTTGCGCAGGAATATTCACTCCCACCCAAGGAGGTCCCTGTG
GAAAAACCAGCTGAGGAGAAATCTGCTACGATC---------------ACTGAGGCCTCACCAGCTGATGAGCCTGCTGC
TGATGTTGAGGAAAAAAGTGAAACTCCTGAGGTGAAAGAGCCAGAAGCGGAAGAAACTGTTCCTGCTGCAGAGGAAAGCG
ATGCGGCTCCTGAGGAAACTGAAGAGAAACCAGAAATTGTGGTATGATATTACTAACTAGTGGCAAATAATAACATCTAT
AACTCT-TAAGTCATTGCTAAACATATGCTGAAATACAGATTGAGACGGCTCCAGCAGATTTTCGTTTCCCCACAACAAA
TCAAACAAGACATTGCTTCACACGCTATGTTGAATACCATAGGTATGGTCCCGCCCTTTCGCCTCTTGGAAATGGTAAAT
TGTTAGTGCATTTGGATCATGGACAAGAACTGTTGTTTTGTGGCAGGTGCGTAGCTGCAAAAGGAGATGATGCTCCTGAG
TGTGAAAAGTTTGCAAAGTACTACCGATCACTATGCCCAAGTGAATGGGTATGTACTTTGTTTCATGCCTTACTTTCTCT
CCACTGCTGCTCGACAGTTTTCCCTGAGATGATGAGATTGGTGTTTTCTATAGCATATGGAGATTTGGTAGTTAGCTTAT
GTTTCCCTGCTTACCTTG-AACTTGGCTAGCAGTGTTGTAATTATCCGAGGACTTCCATTAGATCCTGAAACCTTCCTCA
TGCAGCAATAAAGTGTTTATCATTTGATAAACCCAAACCTTTTCGTGTCAGGCTTATTCTCTCCAGTCTTCCTTTAGCCA
TACATATCCTTTCTGGTCAAGAGTTGCTGTTAATGTAGCAGTGTCTTTACCGAGTCCGCACGTCCTGAACCTGGGTACAT
ATAAACCCGCTTTTCAAAAATATATTTTAAACGCGTTTTGAAATGTCAAAAAATTCAGTGCGTGCATGTTCGCAAACTAT
GTCCGTGGCACAAAGTTTTGTGAAAAAA-GGTCTTTATTTTTTTTCTCTGCAAAAAAGACAAATTTTAGTGTTTCTAAAT
AGCGTTCCACGACACAATG--TTGTCTTTTTTGCACAGGCCAGAAAAAAAGTTGTTTTTCCGTGAAACTTTCTGCACACA
CATAGAATATGGAGATGTGCGCATGCACTTTTT-CCAGAATTTTTTGGCATTTCAAAATTTGTTTTCCAAAGTG------
----------GGTTCATCCATGTACTTCCCTGTCTTTACCTTGGTTCGCCAGGAGTTGGTTCGTTGAGTTGCATGGTTGA
TGTTGTAGTCTGCATGAGATTTGGAGAACTCAGAAACCTTGCAAAATTAACATCTGTGAATTAAAAACCTGATACTTCAT
GGCTTATGATAATTTTGCTTAGATGGTTTCCATATGAAATTATCTTTGTGGGTAGGCTTTAGCTCATATATTGCTGTGCT
ATGTAGAATGTCTAGGATGATTGGTGAACCTTTTTTACGTGGTCTTGATGGCTATCTTTCCGAGCTGGTGGCATTTGAGC
TTGCATAGGCTATTCACAAATTGATTCATTTATTAGTAGATCTCAAGCTTCACTTATATCGCCTATGATTAGGTGGTTAC
AGAGAAAGGTACCCCTTTTCACAACACGGCCTTCCTCAGTTTGATAACATGGCTATGTTTTATACAGGTTGAACGTTGGA
ACGAGCAACGGGAGAATGGTACGTTCCCTGGACCCCTGTAA---------------------------------------
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-----------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G164000
AAATACGAGTCAGTGAACCACAAAAACTTCATCATAGTGTCTTGAAAAGATTCCACTTCCAAAAAAACCCAAGAAAAGAA
ACATGACACGATAACATAAGCTCATTAGATCCAAATAATCGGCTCTGTGCATAACTCTTTGTTTCCATTGCACCGCCACA
ACGAACCGGAGTAATTTATTCGCAAAAATACCATGATTATTGCTAGATGTTGACGAAGACTCTAAAATTCTTGAAAATTC
TAGGGCCCCCACCTTTTAACACAAAGATGGCATCTAGGGGCAAGGGTACCAAAACTTCCTTGCGGCGGCAGCTATTATTG
GGAGTAACTGAGCTGGGCTCATCTGTGGGATTACCGATAGCTCTTGATGTTTTTTCTTTTTTTTAGAAT-ATTTTCTTTT
TGTCCTCCTTTGATTTACATGAATTTTGTAGAAATTTTGAATGATGTAAATTTTGTAGGAAATTTTTCTTTGAAGCCCTT
TGGTTCGTAGGTATAGAATCCTATTCCTATAAAGAATAT------ACTCTTTGTATTTCAAAGGGGGG------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------AA
ACATTATCCTTGACTCAAAGAAAAGAAAATCCAATCTTATGAACCAAAATACTCCCTCCAGCCCAAATTAATTGACACAG
ACTTAGTACAAAGTTGGAGGGAGTAACA-TTTCTTTTTGAGAAACATGAACCAAATAACATACATGTCTTTCGTACGAGA
TACATTTTTTTTTAGGGATTCCTACGAGATACATTTTTTT----GAGACAATCCTACGAGATACATGAACTTTTTGAGTC
AGATGAAAAGACCGGACCATCA-----AGCCGAAACATAAACGGCCGTGTCGTCATAGCCCGGCCCAAAACAACCTACCT
TTCCTGTTCTTCCGAGGGTACTTGGGGGGGCCAGTCTCTTTTTCCTCGTAGATAGACCACGCCCACCAGCTCTACCCTCC
GGTCGTTTCGCTCTC-CCCTCTAGCTCGCAGCCGCCGCGCGTGACTCCAGATCTCCCGCGGCGCGACCATGGCGGCGGAA
GGCAAGGTCCCGACGCTGGCCGAGGTAAGGGAAACCACACCCCCATCCGTATGCACTCTGCCCTCTTATTAGCTTAGGGT
TTCCCTATGTGATTACGCGGCCGCTCCGGGGGATCGGTGCCGTGCCCCGGCCAGATCCGGCGATTTTTATCACCCCGTGG
CCGGATTTGGGCCGAGAGATGGAAGTAGAATCGCACTGGTAGGTTTAGGGGTCAAGTGCCAGTGGCTTCTGTGTTTGCGA
TTGGAGCTGATTGGGTTATAATTGATGTTCGCTGCTGTCGAAATAACCTCATCCAGG-----------------------
-------------------------------------TTCTGTGCCGTCAGATTTTGTTGTTATTCTGCGCTACTTTGGT
GCGCACGAAGACACCGCTCCATAGAATTTGGCAGATTTTCATAGGTTCGGAAGAGAGCAGTGCCTGTTTTGGCTTTACAA
CAATTTTTAGTTGCCTGAGTTGTAGAGTTGGATTGATGTTATGCTTTTATATTTTTGTGTGTTGTATACACTGTTGTATA
TGATTTGCTAGTGTGACACTATTTCTGTAATTACAAGTAAAAGTGAC--TGTGATCTTCATCCTTCCCCCCTATGGAGGT
GGTGGTTGAGATTATAGTTGAACCTTTTC---CATGCATAAAAATGTATAACCCGTGAACCACTGCAACTGAGAACATGA
GCTGTACTTGTAAGGTTGGAGGTGCTTGCATCTGTTCCTTGCTCCTGCACCAGTTAATATGATGTATGAACTCATGCCGA
TCATCTGCTTGCTTAGATTTGGAGCCGTATACAAGAGATTTGTTAGCCTGC-GATTGGATCCCTAGCATGAATTTTAATT
TCTGTATTTTTGTG--TGCTCATTTCATGAATCAAAGCTGACTTCTCTGTCGCTAGTTGTTCATACTGAAATTGATATTT
CATGCTCCAGACCTAGTTTTGAGAACTTGAAATCCGCCCTTGCGCAGGAATATTCACTCCCACCCAAGGAGGTCCCTGTG
GAAAAACCAGCTGAGGAGAAATCTGCTACGATC---------------ACTGAGGCCTCACCAGCTGATGAGCCTGCTGC
TGATGTTGAGGAAAAAAGTGAAACTCCTGAGGTGAAAGAGCCAGAAGCGGAAGAAACTGTTCCTGCTGCAGAGGAAAGCG
ATGCGGCTCCTGAGGAAACTGAAGAGAAACCAGAAATTGTGGTATGATATTACTAACTAGTGGCAAATAATAACATCTAT
AACTCT-TAAGTCATTGCTAAACATATGCTGAAATACAGATTGAGACGGCTCCAGCAGATTTTCGTTTCCCCACAACAAA
TCAAACAAGACATTGCTTCACACGCTATGTTGAATACCATAGGTATGGTCCCGCCCTTTCGCCTCTTGGAAATGGTAAAT
TGTTAGTGCATTTGGATCATGGACAAGAACTGTTGTTTTGTGGCAGGTGCGTAGCTGCAAAAGGAGATGATGCTCCTGAG
TGTGAAAAGTTTGCAAAGTACTACCGATCACTATGCCCAAGTGAATGGGTATGTACTTTGTTTCATGCCTTACTTTCTCT
CCACTGCTGCTCGACAGTTTTCCCTGAGATGATGAGATTGGTGTTTTCTATAGCATATGGAGATTTGGTAGTTAGCTTAT
GTTTCCCTGCTTACCTTG-AACTTGGCTAGCAGTGTTGTAATTATCCGAGGACTTCCATTAGATCCTGAAACCTTCCTCA
TGCAGCAATAAAGTGTTTATCATTTGATAAACCCAAACCTTTTCGTGTCAGGCTTATTCTCTCCAGTCTTCCTTTAGCCA
TACATATCCTTTCTGGTCAAGAGTTGCTGTTAATGTAGCAGTGTCTTTACCGAGTCCGCACGTCCTGAACCTGGGTACAT
ATAAACCCGCTTTTCAAAAATATATTTTAAACGCGTTTTGAAATGTCAAAAAATTCAGTGCGTGCATGTTCGCAAACTAT
GTCCGTGGCACAAAGTTTTGTGAAAAAA-GGTCTTTATTTTTTTTCTCTGCAAAAAAGACAAATTTTAGTGTTTCTAAAT
AGCGTTCCACGACACAATG--TTGTCTTTTTTGCACAGGCCAGAAAAAAAGTTGTTTTTCCGTGAAACTTTCTGCACACA
CATAGAATATGGAGATGTGCGCATGCACTTTTT-CCAGAATTTTTTGGCATTTCAAAATTTGTTTTCCAAAGTG------
----------GGTTCATCCATGTACTTCCCTGTCTTTACCTTGGTTCGCCAGGAGTTGGTTCGTTGAGTTGCATGGTTGA
TGTTGTAGTCTGCATGAGATTTGGAGAACTCAGAAACCTTGCAAAATTAACATCTGTGAATTAAAAACCTGATACTTCAT
GGCTTATGATAATTTTGCTTAGATGGTTTCCATATGAAATTATCTTTGTGGGTAGGCTTTAGCTCATATATTGCTGTGCT
ATGTAGAATGTCTAGGATGATTGGTGAACCTTTTTTACGTGGTCTTGATGGCTATCTTTCCGAGCTGGTGGCATTTGAGC
TTGCATAGGCTATTCACAAATTGATTCATTTATTAGTAGATCTCAAGCTTCACTTATATCGCCTATGATTAGGTGGTTAC
AGAGAAAGGTACCCCTTTTCACAACACGGCCTTCCTCAGTTTGATAACATGGCTATGTTTTATACAGGTTGAACGTTGGA
ACGAGCAACGGGAGAATGGTACGTTCCCTGGACCCCTGTAAGCTTCAGTGGCGCTGGAAGGACAAACATGCCATCATCCC
CAC-----CTCCCTGGTGACTGGACAAAGTTACTTTGTGCCGAGAATTCGTCACCTTCCTTTCCTTTTTGAGGACTACTT
ACAAATAAGTTTTTGACTTGATGTAAGCTGAAGGTGCTGCCCATCAGTTTCTCCCAACGATCATTCACTGGATTTTATAC
AACATCCACCTTTGGAATTTGACTGAACTTGCTGTTTTGCGTGGCACGGTTCAAGGCGGTCATTTTGGTTGCACAGGAAA
TTTCTAAACCGCATGGAATAAAATTAGCAACCTAGTTCTAGCAGGGCCGATGTTTCTGAAACCCATTTCATTTCTCCTGT
CTTCTAAGTAGTACATTTTATTTGGTTATATAGCTTATAGCACATATAATCTGCATAAAGGAGGCAATGACCTGCTTCTT
AATTCACAAGGCATTGTGTTTACTTGAAATTTGGTGTGGTTACTATAT---------------------------ATCAG
TCTTTCTTGTGCTGGAATGTGAAAA-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTAGCTCTCTATTCAAAACGA----
-------------------------------------------CGCTGGCCTATTGAAGCACATGCTGCTGAAAAGTAGA
CTTGGAGTTAGCTCTACTAGGAGGGGGTATGTTCGAATGGTGTCCAATACTTCTGTAGTCATGGTCAGG---TTGGTGTT
TGTCTAGATGGTTGCCAATATTTCGGTCTGCCAATGACAATTTGGCAACTCAACCTCATTTTTCTAGCCAATGTTAGTCA
AGCTACGGGTAAATAAAAGCCTGACCAAAATATTGGCTAGCCAAATACAGTATTTAGTAGG-GCTAACTTGGGCTCAAAC
TAAGCACCCTTGTGAGATGAGGAGATGAACGCCCTGAGTGGGTTAGCCAAATATTAACTTGGCTAT--------------
--------------------------------------------------------------------------------
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-----------------------------GGTAGTTCGTTGAACTTGCCTTCTTGATGCTTCTTTGTGTCTCCACAAGAT
CACCGGCCTCCTTGATGCTTGTTTGCGTCTCCACAAGATCACCGACCTCCTCAACTCGGGATCATCCTCCCTCTCAT
>chr2D_344
TGTGG---------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------ATTACCGATAGCTCTTGATGTTTCTCCTTTTTCTTGAGAACATTTTCTTTT
AGTCCTCCTTTGATTTACATGAAATTTGTAGA---TTTGAATGATGTAAAATTTGTAGGGAAATTTTCTTTGAAGCCCTT
TGGTTCGTAGGTATAGAATCCTATTCCTATAAAGAATAGAAACCGACTCTTTGTATTTCAAAGGGGAAAAAACATTAGCC
TGGACTCAAGTAAAAGAAAATCCTATCCTATGAACCAAATACTCCCTCCAGGCCAAATTAATTGATGCAAACTTATTACA
AAGTTGTACTAATTTTGTATTAAGTCTGATGCAATTAATATGGATCGGAGGGAGTAACATTTTTTTTTGAGAAACATGAA
CCAAATAACATGTCTTTCCTGCGAGATACATTTTTTTAGGGGTTCCTATGAGATACATTTTTATATTTCAAAGGGGGAAA
ACATTACCCTTGACTCAAATAAAAGAAAATCCAATCTTATGAACCAAAATACTCCCTCCAGCCCAAA-TAATTGACGCAA
ACTTAGTACAAAGTTGGAGGGAGTAACATTTTCTTTTTGAGAAACATGAACCAAATAACATACATGTCTTTCGTACGAGA
TACATTTTG--TTAGGGATTCCTACGAGATACATTTTTTTTTTTGAGACAATCCTACGAGATACATGAGCTTTTTGAGGC
AGATGAAAAGACTGGACCATCA-----AGCCCAAATATAAACGGCCGTGTCGTCATAGCCCGGCCCAAAACAACTTCCCT
TTGTTGTTCTTCCGAGGGTACTA--GGGGACCAGTCTCTTTTTTCTTCTAGATAGACGACGCCCACCAGCTCCACCCTCC
GGTCTTTTCTCTCCTTCCCTCTAGCTCGCAGCCGCCGCGCGTGACTCCAGATCTCCCGCGGCGCGACCATGGCGGCGGAA
GGCAAGGTCCCGACGCTGGCCGAGGTAAGGGAAACCACACCTCCATCCGTCTGCACTCGGCCGTCTTATCAGCTTAGGGT
TTCCCTATGTGATTACGCGGCCGGTCCCGGGGATCGGTGCCGTGCCCCGGCCAGATCCGGCTATTTTTACCACCCCGTCG
CCGGATTTAGGCCGCGAGATGGAACTAGAATCGCACTAGTAGGTTTAGGTGTCAAAGGCCAGTGGCTTCTGTGTTCGCGA
TTGGAGCTGATTGGGCTGTTATTGATGTTCGTTGCTGTCGAACTAACCACATCTCCATATAATTTTTTGTTTAGATTTTG
TTGTTGTCGAAATAACCACATCTCAAAGGCCAGTGGCTTCTGTGCCTTCAGATTTTGTTGTTTAT-TGCGCAGCCTTGGT
GCGAACGAAGGCACGGCTCCATAGAATTTGGCAGATTTTCATAGGTTCGGAATAGAGCAGTGCCTG--TTGGTATTACAG
CAATTTTTAGTTGACCGAGTTGTAGAGTTGGCTTGATGCTATGCTTTTATATTTTGTG-------------TGTTGTATA
TTGTTTGCTCGTTTGACATTATTTCTGTGATTACAAGTACAAATGAGTGTGTGATCTTCATCTTCCCCT-CTATGGAGAT
GGTGGTTGAGATTATAGTTGAACCTTTTCGTCCATGCATAAAAATGTATAACCTGTGAATCACTGCAACTGAGAACATGA
GCTGTCCTTGTAAAGCTGGAGGTGTTTGCATCCGCTCCTTGCTCCAGCACCAGTTGATATGGTCTATGAACTCGTGTTGG
TCATCTGCTTGCTTAGATTTGGTGCCGTACACTAGAAATTTGTTAGCCTGCGGATTGGGTCCCTGGCGTGAATTTTAATT
TCTGTATTTTTTGTGTTGCTCATTTCATGAATCAAAGCTAACTTCTCTGTCGCTAGCTGTTCACACTGAAATTGATATTT
CATGCTCCAGACCCAGTTTTGAGAACTTGAAATCCTCCCTTGCGCAGGAATATTCACTCCCACCCAAGGAGGTCTCTGTG
GAAAAATCTGCTACGAGCACTGTGGCCGAAGTTGTTCCTCAGAAGGATACTGAAACCTCACCAGCTGATGAGACCGCTGC
TGCTGTTGAGGAAAAAAGTGAAACTCCTGAGGTGAAAGAGCCAGAAGCGGAAGAAACCGTTCCTGCTGCAGAGGAAAGCG
ATGAGGCTCCTGAGGAAACTGAAGAGAAACCAGAAATTGTGGTATGATAGTACTAACTAGTGGCAAAAAATTACATCTAT
AACTCT-TAAGTCATCGCTAAACATATGATGATATACAGATTGAGACTGCTCCAGCAGATTTTCGTTTCCCCACAACAAA
TCAAACAAGACATTGCTTCACGCGCTATGTTGAATACCATAGGTATGGTCCTGCCCTTTCGCCTCTTGGAAATGGTAAAT
CATTAGTGTATTTGGATCATGGACAAGAACTGTTGTTTTGTGACAGGTGCGTAGCTGCAAAAGGAGATGATGCTCCTGAG
TGTGAAAAGTTTGCAAAGTACTATCGATCACTATGCCCAAGTGAATGGGTATGCGCTTTGTTTCATGCCTTTCTTAA---
-CACTGCTGCTCGACAGTTTTCCCTGAGATGTTGAGATTGCTGTTTTCTATGGCATATGGAGATTCGGTAGCTAGTTTAT
GTTTCCCTGCTTACCTTGGAACTTGCCTAGCAGCGCTGTAATTATCCAAGGACTTCCATTAGATCCTGAAACCTTCCTCA
TGCAGCAATACAGTGTTTATCATTTGATAACCCCAAACTTTTTCGTGTCATGCTTATTCTCTCCAGTCTTCCTTTAGCCA
TACACATCCTTTCTGGTCAAAAGTTGCTGTTAATATAGCAACA-------------------------------------
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--------------------------------TCTTTACCTTGGTTCACCAGGAGTGGGTTCGTTGAGTTGCATGGTTGA
TTTTGTAGTCTGAGTGAGATTTGGAGAACTCAGAAACCTTGCAACATTGGCATCTGTGAATTAAAAACCTGATACTTCAT
GGCTTATGATAATTTTGCTCAGATGGTTACCATATGAAATTATCTTTGGGGGTAGGCTTTAGCTCATATAATGCTGTGCT
ATGTAGAATGTCTAGAATGATTGGTGAACCTTGTTTACATGGTCTTGATGACTATCTTTATGAGCTGGTGGCATTTGGGC
TTGCATAGGCTATTCACAAATTGATTCATTTATTAGTAGATCTCAAGCTTCACTTATATCGCCTATGATTAGGTGGTTAC
AGAGAAAGGTACCCCTTTGCACAACACGGCCTTCCTCAGTTTGATAACATGAC--TGTTTTATGCAGGTTGAACGTTGGA
ACGAGCAACGGGAGAATGGCACATTCCCTGGACCCCTGTAAGCTTCAGTGGCGCTGGAAGGACAAACATACCATCATCCC
CACCTATTCTCCCTGGTGACTGGACAAAGTTACTTTCTGCCGAGAATTCGTCACCTTCCTTTCCTTTTTGAGGACTACTT
ACAAATAAGTTTTTGACTTGATGTAAGCTGAAGGTGTTGCCCATCAGTTTCTCCCAACGATCATTCACTGGATTTTATAC
AACATCCACCTTTGGAATTTGACTGAACTTGCTGTTTTGCGCGGCACGGTTCAAGACGGTCATTTTGGTTGCACAGGAAA
TTTCGAAACCGCGTGGAATAAAATTAGCAACCTAGTTCTAGCAGTGCCAATGTTTCAGAAACCCATTTCATTTCTACCGT
CTTCTAAGCAGTACATTTTATTTGGTTATATAGCTTATAGGGCATATAATCTGCATAAAGGAGGCAATGACCTGCTTCTT
AATTCACAAGGCATTGTGCGAACCTGAAATTTGGTGTGGTTAC---------------------------TATTGATCAG
TCTTTCTTGTGCTGGAATGTGAAAA-------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------GTAGCTCTCT----------A----
-------------------------------------------CGCTGGCCTATTGAAGCACATGCTGCTGAAAAGTAGA
CTTGGAGTTAGCTCTACTAGGAGGGGGTATGTTTGAATGGTGTCCAATACTTCTGTAGTCATGGTCAGG---TTGGTGTT
TGTCTAGATGGTTGCCAATATTTTGGTCTGCCAATGACAATTTGGCAACTCAACTTCATTTTTCTAGCCAATGTTAGTCA
AGCCATGGGTAAATATAAGCCTGACCAAAATATTGGCTAGCCAAATTTTTATTA------GAGCTATCTTGGGCTCAAAC
TAAACACCCATGTGACATGAGTAGATGAACGCCCTGAGTGGGTTAGCCAAATATTGACTTGATCAATACAATCGGACAAC
CTCTTGCATTGATAATGAACGGTCACATTGTTGAGTAGTACTCTTCAGTTATCGAACAATGTCATTTGACTTGTACCAAC
CGAGGTATCAAGCTTCAGTTATCGAACAATGTCATTTGACTTGTACCAACCGAGGTATCAAGCGATCCATTCATCCAAGC
AAGGCACAAAGCAATGTCCTCTTGGCTACGGTAGTTCGTTGAACTTGCCTTCTTGATGCTTGTTTGTGT-----------
----------------------------CTCCACAAGATCACCGACCTCCTCAACTTGGGATCATCCTCCCTC----
>chr2B_750
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---------------------------------------------------TCGTACGAGATACATGAAGTTTTTGAGTC
GGATGAAAAGACTGGACCATCAACTCGAGCCCAAACATAAACGGCCGTGTCGTCATGGCCCGGCCCAAAACAACTTCCCT
TTCTTGTTCTTCCGAGGGTACTA--GGGGACCAGTCCCTTTTTTCTTCTAGATAGACGACGCCCACCAGCTCTACCCTCC
GGTCGTTTCTCTCTTTCCCTCTAGCTCGCAGCCGCCGCGCGTGACTCCAGATCTCCCGCGGCGCGACCATGGCGGCGGCA
GGCAAGGTCCCGACGCTGGCCGAGGTAAGGGAAACCACACCTCCATCCGTCTGCACTCTGCCCTCTTGTTAGCTTAGGGT
TTCCCTACGTGATTACGCTGCCGCTCCCGGGGATCGGTGCCGTGCCCCGGCCAGATCCGCCTATTTTTACCACCCCGTGG
CCGGATTTGGGCCGAGAGATGGTACTAGAATCGCACTAGTAGGTTTAGGGGTCAAGGGCCAGTGGCTTCTGTGTTCACGA
TTGGAGCTGATTGGGTTATAATTGATGTTCGTTGTTGTCGAAATAACCACATCTCCATATAATTTGTTGTTTAGATTTTG
TTGTTGTCGAAATAACCACATCTCAAAGGCCAGTGGCTTCTGTGCCTTCAGATTTTGTTGTTTAT-TGCGCAGCCTTGGT
GCGAACGAAGGCACGGCTCCATAGAATTTGGC---------------------AGAGCAGTGCCTG--TTGGTATTACAG
CAATTTTTAGTTGACTGAGTTATAGAGTTGGCTTGATGCTATGCTTTTATATTTGTGTA--------------TTGTATA
TGGTTTGCTTGTGTGACATTATTTCTGTGATTACAAGTACAAATGAGTATGTGATCTTCATCTTCCCCT-CTATGGAGGT
GGTGGTTGAGATTATAGTTGAACCTTTTCGTCCATGCATAAAAATGTATAACCTGTGAATCACTGCAACTGAGAACATGA
GCTGTCCTTGTAAACCTGGAGGTGTTTGCATCTGCTCCTTGCTCCAGCACCAGTTGATATGGTCTATGAACTCAGTTTGT
TCATCTGCTTGCTTAGATTTGGTGCCGTACACTAGAAATTTGTTAGCCTGCGGATTGGGTACCTAGCGTGAATGTTAATT
TCTGTATTTTTTGTGT-GCCCATTTCATGAATCAAAGCTAACTTCTCTTTCGCTAGCTTTTCACATTGAAATTGATATTT
CATGCTCCAGACCCAGTTTTGAGAACTTGAAATCCGCCCTTGCGCAGGAATATTCACTCCCACCCAAGGAAGTCTCTGTC
GAAAAATCTGCTACGAGCACTGTGGCCGAAGTTGTTCCTCAGAAGGATACTGAAACCTCACCAGCTGATGAGACCGCTGT
TGCTGTTGAGGAAAAAAGTGAAACTCCTGAGGTGAAAGAGCCAGAGGCGGAAGAAACCGTTCCTGCTGCAGAGGAAAGCG
ATGAGGCTCCTGAGGAAACTGAAGAGAAACCAGAAATTGTGGTATGATATTACTAACTAGTGGCAAATAATTACATCTAT
AACTCTTTAAGTCGTTGCTAAACATATGCTGATATACAGATTGAGACAGCTCCAGCAGATTTTCGTTTCCCCACAACAAA
TCAAACAAGACATTGCTTCACGCGCTATGTTGAATACCATAGGTATGGTCCTGCCCTTTCGCCACTTGGAAATGGTATTT
CATTAGTGCATTTGGATCATGGACAAGAACTGTTCTTTTGTGGCAGGTGCGTAGCTGCAAAAGGAGATGATGCTCCTGAG
TGTGAAAAGTTTGCAAAGTACTACCGATCACTATGCCCAAGTGAATGGGTATGCACTTTGTTTCATGCCTTACTTTCTTT
CCACTGCTGCTCGACAGTTTTCCCTGAGATGATGAGATTGGTGTTTTCTATAGCATATGGAGATTTGGTAGTTAGTTTAT
GTTTCCCTGCTTACCTTG-AACTTGCCTAGCAGTGTTGTAATTATCCAAGGACTTCCATTAGATCCTGAAACCTTCCTCA
TGCAGCAATACA---TTTATCATTTGATAAACCCAAACCTTTTCGTGTCAGGCTTATTCTCTCCAGTCTTCCTTTAGCCA
TGCATATCCTTTCTGGTCAAAAGTTGCTGTTAATGTAGCAACGTCTTTACCGAGTCTGCACGTCCTGAACCCGGGTACAT
ATGAATCCGCTTTTCAAAAATATATTTTAAACGTGTTTTGAAATGTCAAAAAATTCAGTGCGTGCATGTTCACAAAATAT
GTCCCTGCCACAAAGTTTTGTGAAAAAAAGGTCTTTTTATCTTTTCTCTGCAAAAAAGACAAATTTTAGTGTTTCTAAAT
AGCGTTCCACGACACAATGTTTTGTCTTTTTTGCACATGCCAGAAAAAAAGTTGTTTTTCCGTGAAACTTTCTGCACACA
CATAGAATATGGAGATGTCCGCATGCACTTTTTTCCAGAATTTTTTGGCATTTCAAAATTTGTTTTCCAAAGTGGGTTCA
TATGTACCCGGGTTCATCCATGTACTTCCCTGTCTTTACCTTGGTTCGCCAGGAGTTGGTTCGTTGAGTTGCATGGTTGA
TTTTGTAGTCTGCATGAGATTTGGAGAACTCAGAAACCTTGCAAAATTAACATCTGTGAATTAAAAACCTGATACTTCAT
GGCTTATGATAAT-----------------CATATGAAATTATCTTTGTGGGTAGGCTTTAGCTCATATATTGCTGTGCT
ATGTAGAATGTCTAGAATGATTGGTGAACCTTGTTTACGTGGTCTTGATGGCTATCTTTACAAGCTGGTGGCATTTGGGC
TGGTGACATTGGTGAAC-----------------------------------CTTATATCGCTTATGATTAGTTGGTTAT
ACAAAAAGGTACCCCTGTTTACAACACAGCCTTCCTCAATTTTATAGCATGGCTGTGTTTTATGCAGGTTGAGCGTTGGA
ACGAGCAACGGGAGAATGGCACATTCCCTGGACCCCTGTAAGCTTCAGTGGCGCTGGAAGGACAAACATACCATCATCCC
CACCTATCCTCCCTGGTGACTGGACAAAGTTACTTTGTGCCGAGAATTCGTCACCTTCCTTTCCTTTTTGAGGACTACTT
ACAAATAAGTTTTTGACTTGATGTAAGCTGAAGGTGCTGCCCATCAGTTTCTCCCAACGATCATTCACTGGATTTTGTAC
AACATCCACCTTTGGAATTTGACTGAACTTGCTGTTTTGCGTGGCACGGTTCAAGACGGTCATTTTGGTTGCACAGGAAA
TTTCGAAACCGCGTGGAATAAAATTAGCAACCTAGTTCTAGCAGTGTCGATGTTTCTGAAACCCATTTCATTTCTCTTGT
CTTCTAAGCAGTACATTTTATTTGGTTATATAGCTTATAGGGCATATAATCTGCATAAAAGAGGCAACGACCTCTTAGTT
-ATTCACAAGGCACTATGCATACCTGAAATTTGGTGTGGTTACT------------------------------------
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>chr2D_3742
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---------------------------------------CCGAGAATTTGCCACTTTCCTTTTCTTTTTGAGGACTACTT
ACAAATAAAATTTTGACTTGATGTAGGCTGAAGGTGCTGCCCATCAGTTTCTCCCAACGATCATTCACTGGATTTTATAC
AACATCCACCTTTGAAATTTGACTGAACTTGCTGTTTTGCGTGGCACGATTCAAGACGGTCATTTTGGTTGCACAGGAAA
TTTCGAAACCGCATGGAATAAAATTAGCAACCTAGTTCTAGCATTGCCGATGTTTCTGAAACCCATTTCATTTCTCCTGT
CTTCTAAGCAGTACATTTTATTTGGTTATATAGCTTTTAGGGCATATAATCTGCATAAAAGAGGCAACGACCTCTTCATT
-ATTCACAAGGCATTTTGCGTACCTGAAATTTGGTGTGGTTACTCTTGGATCTTTTGACGACCTTTGCAGTATTGTTCAG
CCTTTCTTGTGCTGGAATGTGAAACCCAGAGTGTGTTGACGAGGCACTAGCTCTCTGAACTAAAGCGGAGCTTGATCATT
GTGGATCTGTTGCCCTGAAGTAGTTCGTTCCTGGCCATATGGGGAACTGGAGAAACACATCTCTGTTTGCATGGAATGTG
ATAGTACCCCTTTTGTAAAGGCCTCACTGCCGGCAGAGCAAATCACGTACATGTGGTAGCTCTGTATTTAAAACACGCAT
CGCACGGCATAATAGCAAAGACTGCCCGTTTGCCGGGAGAGGGCGGTGGCCTAGTGAAGCACATGCCACTAGAAAGTAGA
CTTAGGAG------------------------TTAAATGGTGGCCGATACTTCTGTAGTCATGGTCAGGTTTTTGGTGTT
TGTCTAGATGGTTGCCAATATTTTGGTCTGCAAATGACAATTTGGCAACTCTACTTCATTTTTCTAGCCAGTGTTAGTCG
ACTCATGGATAAATAAAAGCTTGACCAAAATATTGGCTAGCCAAATATTTAGTA------G-GCCTACCTGAGCTCAAAC
CAAACACCCATGTG------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------S-S------S--SSS-S-----------
S----------------------S--------SSS---------------S--------S--S-----------------
--------------------------------------S---------------------------SS------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S------------S-----------------------------------------------S--------S--S
--------------------------------------------------------------------------------
--------SSS---------------------------------------------------------------------
------------S------------------S------------------------------------------S-S---
---S------------------SSS----S-------------S--SS---------S----------------------
---------S----S-----------------------------------------------------------------
-----------------------------------------S--------S-----------------------------
---------------------------S---------------------------------S-------S----------
------------------------S------------S------------------S------------------S----
-------------------------------S----------------S----SSSS-----------------------
----------------------------------------------S---------------SS-S-----SS-S-----
---S------S---S-------------------------------------S-------------SS----SS-----S
-------------S-----------------S------S-------------------SSSSSSSSSSSSS---------
--S------S--------S---------S----------S--S---S---------------S-S---SS----------
-----------------------------------------------------S-----S--------------------
-----S-------S-S--------S---------S----------S---------S-----S-S------------SS-S
----------------------S------S--S---S---------------------S--------S------------
-----------SSS-------------------------S----------------S------S----------------
-------------S------------------------------------------------------------S-----
------S-S---SS-SSS-SSSSS--SSSSS-S--------------------SS-----------------S-S-----
--S------------------------------------------------------S----------------------
---S-------------------------------------------------------------------S--------
--------------------------------S--------------S--------------------------------
---------------------S-----------------------------S----------------------------
SS------------------------------------------------------------------------------
-----------------------------------------------------S------------------------S-
---------------------------------------------------------------------------S----
-------------------------S---------------------S--------------------------------
----------S---------------------------------------------------------------------
--------------------S-------------------SS--------------S--------------S--------
--S--S---------------------------S-------------------------------------S----S---
----S--S----------------------------S-S-S---------------------------------------
-------------------------------------S------------------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
-------------------S--------S---------------------------------------------------
---------------S----------------S--------------------------S-----------------S--
--------------------------------------------------------------------------------
------------------------------------------------------S--------S----------------
-------------------S--S----------------------------------------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
----S---------------------------------------S-----------------------------------
--------S-------------------------------SS--------------------------------------
------------------SS---S--------------------S-SS--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------S-----S-----
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
-----------------------S------------------------------S-------------------------
---S-S-----------------------------------------SSSSS-SSSSSSS--------------------
---S-----S-----S-----S---------------------------------S-----SSS-S--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------S-------SSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSS----------------------------S----------------SSSS
>forward_289
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------GCATCTAGGGGCAAGGGTAC-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2393
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------------------------------------------------------------------------CCTGCTGC
TGATGTTGAGGA--------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1748
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------------------------------------------------GGAAGAGAGCAGTGCCTGTT------------
--------------------------------------------------------------------------------
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>reverse_3161
--------------------------------------------------------------------------------
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----------------------------------------GTGTCTTTACCGAGTCCGCA--------------------
--------------------------------------------------------------------------------
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>forward_2035
--------------------------------------------------------------------------------
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---------------TTGGAGGTGCTTGCATCTGT---------------------------------------------
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>reverse_3459
--------------------------------------------------------------------------------
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------------------GCGCATGCACTTTTTCCAGA------------------------------------------
--------------------------------------------------------------------------------
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>forward_3272
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----------------------------------------------------ATTCAGTGCGTGCATGTTCG--------
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>reverse_4296
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-------------------------------------------------------GCGGTCATTTTGGTTGCACA-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------
