>input_sequence_29372
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--------------------------------------------------------------------ATGGACTGCTGC
TTCCCCTGCCTGGGCGCCAAGAGGAAGCGCAAGCCGCCGCCGCCGCCGGAGAAGCCCCAGATCCCTCCCGCCGCAGGTGA
TCCGCCCACGCCACTGCCTTCTTTCTTGCCGTCTTCTTCCTCGCCCCGTCCTCCCCGGCCGTCGCGGATTTGTTCATCTC
CGCCAGATTCACGGAGTGGTTCGCC--------------------GATTCCGCGAACTGATTCGTGGCTCCGGCT-----
---CCCCCGCCGCCGTTCCTGGT-------------------TCCCGTCAGTCCAGTTCCCCCCTCCCCTGTTTC--TTC
TAAAGAAAAAGG----AAAAAAAGTTGGCCCCTCCAGAAAATCGTTGCAAACTCTGCCCAAAATCATGGTATCCCGCCGA
ATCCGCCTCCCCCCGAAACATGGCAGCTCGGTGCCGGGATTCCGGCCGGGGATGACGCGTGCTCGCCACTTTCGTCGCC-
---AGACAACGCGTGCACTCCTTTCCCTAAATACCCCGTCTTCTTTATTCGCCTCATGATTCTGACGCACGCGTTCCGTT
TTTTTCCAG----ATAAAGAGAAGCCGGGGTGCTCCTCCTCGTCGACGACCGCGGCGGCGGCGGCGCGGCAGGACTCGCT
GTCGGAGGCCAAGAAGGATTTTGTCCTCAGCAACGGATCCGAGCACCGCCACATTGCCGCGCAGACCTTCACCTTCAGGG
AGCTCGCCGCGGCGACCAACGGCTTCAGGGCCGACTGCCTTCTGGGGGAGGGCGGCTTCGGCCGGGTCTACAAGGGGTAC
CTGGAGAGCATCAACCAGGTGAGGAGGTTCTTGCTAATTTATTCTGCCCTCCCAGTTCATTAGCACCATTTTGTTTATTT
AGAAGCTTCCACTTGGAGGATTGTGTGGAGCACTTGTAAATTGTCTCCTAGTGAACGTGTCACACAGCCTGAACCCGAGA
CCGGGTTTAGGCTGCGGGTTTCGCTGTCGAAGTAATAGAAAATGGGGGTTATCCAGGTTCCAAGGATTGTTGTTGTTAAT
CCTCGGTTGATTTACATT-CACAGCTATTGAGCGATAACATTAACATGTGGTAAATTTTAAAAGTTATGCATACGAATTT
GTCAAACTATTTCCTGAAGCTAGTTGACATGGTGAAATGTATTTTGTTGCCGTCACAGGTTGTCGCCATAAAGCAGCTCG
ATCGAAATGGACTGCAAGGCAACAGGGAGTTTCTTGTTGAGGTCCTCATGCTGAGCTTGCTGCACCACCCACACCTAGTC
AACCTTATTGGCTATTGCGCCGATGGCGACCAGAGGCTTTTGGTTTACGAGTATATGCCGCTGGGTTCTTTGGAAGACCA
CCTTCACGGTATGCTGCTGAAAAAAAGAATGTGTTTCTGCTTTGTTACAGCTTCTATTTGATAATTTAAGTTTCTGTGCT
CACAAGTGGATCCTATTTTATTCAGATCCTTCCCCAGATAAACCCCGCCTTGACTGGAATACAAGGATGAAGATAGCTGC
CGGTGCAGCTAAAGGGCTGGAGCATTTGCATGACAAAACAAATCCTCCTGTCATATACCGGGACTTGAAATGTTCAAACA
TCTTGCTCGGAGAGGGATACCACCCAAAGCTGTCTGACTTTGGATTGGCAAAGCTTGGCCCAGTTGGCGATAAGACGCAC
GTTTCCACCAGAGTGATGGGTACATACGGGTATTGTGCCCCTGAGTATGCTATGACTGGTCAGCTGACTCTGAAGTCAGA
TGTTTACAGCTATGGTGTTGTTCTATTGGAGATCATCACAGGACGAAGGGCTATCGACAACACCCGAGCTGCAGGGGAGC
AAAATCTTGTTGCATGGGTAAGCTGCCGATTTGTTTTTTGTTACGTTCTTTTC---TTTTTC---TTGTTATTCTTTTTC
ATTCCGTTATAGACTACTGGAGTTTAACTGTAGAGAACATCGCA------TTGTGAAACCTGCTACCTCTTGTGAGTATT
GATTGTTAATGTATTCTGGAAAATCCACCGGATATCAGCCTCTTAGCTCGGAAGTTGCGA-AAGCTGAGTGTTAGCGCAT
CAACCTTATGTATCACCTGTATTTCAGT--------------------TCATCTCTGCATTTCTTTCCACTTTTGGAATT
TACACTAATTTTGCTTGAAGGAC---ATATTGTCCTTTCCTTCAGCTGAAAAAACATCGTCCTT------------GCAA
TGTTTTTCAGTTGTAGGGTTACTAAAAAGCTACTGTACTAGAATGAAATAGTTCCATACTACATTTTTTTGGCATTATTG
GATTGGCCTAGGTTTGCCTTCCCAAAA-GACATTATTGCAGTCCGTTGAATAGGATCGAACGAATAGGGTCATGACATGC
CAAAGCCTTTGCTCAAGATGTCGTGTAGCATTTTGCAATCCCTGTTGATGTAACGTTTGTTGGTGCACAATTTCAGGCCC
GGCCCTTGTTCAAGGACAGGAGGAAGTTCCCCCAGATGGCGGACCCAGCGCTGGAGGGCAGGTACCCAGCTAGGGGACTG
TACCAGGCCCTTGCCGTCGCCGCAATGTGCGTGCAAGAACAGCCTACCCTGAGACCGTTGATCGGCGACGTCGTCACAGC
CCTGAGCTACCTTGCCTCCCAGCCCTACGATCCGGAGGTGCACGGCGTCCACCGCCCGTCGCGCCTGACGGCTTCAGGAA
CGCCGCCCCGAGCCCGGAAAGATGGCGCGGATCATCAAAGAGGAGGAAGCGAGTGA------------------------
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----------------
>chr2B_1_TraesCS2B01G096000
GTGGCGAGGCCACCAAGGAGTCTACTCCAACTTTAAGGTTGGCCAGGCTCCTCGTCCATAAACCCCTACCCGCACAATCC
TCATCCTCTCACACACACATCCACCGCACGCCACACACCACCAAACCTTCCGGCCACCATGACGTGCAAGAAGTCTGACA
TTGAGAAGTGGTTGCGGGCGTGCTGATCCGTATCCACGGGTAGCTCCGGATCCAGTTAGCACGTGACATCGCTCCCCAGC
CGCCATCCTGGTTCCCCCGTGGCCAAACCAGGTGCCGCTTTCGGAGGAGCGGATGTTGGACGAGGAGCAAGTGGGGGAGG
AGTAGGCCACCATCTTTATCGAGGAGGAGGGAGGATCGTCGTTATGTGCTAGAGGTTGCGCCCGTCCTGTATGATCAAAC
TTTGTTTTAATTTCATCCGTTTCGGTTCGATTTCATCCGTGCTCCTGAACATTCCGTTTGAAGTGGGTGAAACGTTTGAT
GCCTACGGCCGGATGACCGGCATCCCTCCAACCGTCCGCAAACGCTTCCGGACGTGTCCGCGAGCGTTCGATGCCATCCG
TTAGATGATCCGCGGTGGAGCTGCCCTAAGCTTAAGCTCGGTGTAGCCACGAGCCTTC-CAGTCCACGCAGCACCGAACA
AGTTACTGTTTACCCGGCATGGAATGCGGTGCGGCCACTAGCTAGTGTGCGTGCGTG----ACTTTTGCTTTCCGTTTGA
CACTTGCGCCGCGTAGAGTAGCCGTCCTCCCTTCCCCTCTTGTGCGC-TGCGTTGCGTTGCGTTGCGTTCTTCTAGAAGC
CAAGCCAAAGCGGAGAAGGGCCGCCCCCCAATATTAACTCAAAAATCATTTCGTCCTCGTTTTCGCTCCCCCT-TCCCCT
CGCCTCGCCTCGCCTCG----CCTTCCTTCTTCCCCACGCGCACGCGCAACGCGGACGGACGCGGAGCACACTCAAACCT
CCCACCTCTCTCCCC------CCCAT-----------CCCCACCCAAGAAGAGGTCTTGGGAGCCGCCATGGACTGCTGC
TTCCCCTGCCTGGGCGCCAAGAGGAAGCGCAAGCCGCCGCCGCCGCCGGAGAAGCCCCAGATCCCTCCCGCCGCAGGTGA
TCCGCCCACGCCACTGCCTTCTTTCTTGCCGTCTTCTTCCTCGCCCCGTCCTCCCCGGCCGTCGCGGATTTGTTCATCTC
CGCCAGATTCACGGAGTGGTTCGCC--------------------GATTCCGCGAACTGATTCGTGGCTCCGGCT-----
---CCCCCGCCGCCGTTCCTGGT-------------------TCCCGTCAGTCCAGTTCCCCCCTCCCCTGTTTC--TTC
TAAAGAAAAAGG----AAAAAAAGTTGGCCCCTCCAGAAAATCGTTGCAAACTCTGCCCAAAATCATGGTATCCCGCCGA
ATCCGCCTCCCCCCGAAACATGGCAGCTCGGTGCCGGGATTCCGGCCGGGGATGACGCGTGCTCGCCACTTTCGTCGCC-
---AGACAACGCGTGCACTCCTTTCCCTAAATACCCCGTCTTCTTTATTCGCCTCATGATTCTGACGCACGCGTTCCGTT
TTTTTCCAG----ATAAAGAGAAGCCGGGGTGCTCCTCCTCGTCGACGACCGCGGCGGCGGCGGCGCGGCAGGACTCGCT
GTCGGAGGCCAAGAAGGATTTTGTCCTCAGCAACGGATCCGAGCACCGCCACATTGCCGCGCAGACCTTCACCTTCAGGG
AGCTCGCCGCGGCGACCAACGGCTTCAGGGCCGACTGCCTTCTGGGGGAGGGCGGCTTCGGCCGGGTCTACAAGGGGTAC
CTGGAGAGCATCAACCAGGTGAGGAGGTTCTTGCTAATTTATTCTGCCCTCCCAGTTCATTAGCACCATTTTGTTTATTT
AGAAGCTTCCACTTGGAGGATTGTGTGGAGCACTTGTAAATTGTCTCCTAGTGAACGTGTCACACAGCCTGAACCCGAGA
CCGGGTTTAGGCTGCGGGTTTCGCTGTCGAAGTAATAGAAAATGGGGGTTATCCAGGTTCCAAGGATTGTTGTTGTTAAT
CCTCGGTTGATTTACATT-CACAGCTATTGAGCGATAACATTAACATGTGGTAAATTTTAAAAGTTATGCATACGAATTT
GTCAAACTATTTCCTGAAGCTAGTTGACATGGTGAAATGTATTTTGTTGCCGTCACAGGTTGTCGCCATAAAGCAGCTCG
ATCGAAATGGACTGCAAGGCAACAGGGAGTTTCTTGTTGAGGTCCTCATGCTGAGCTTGCTGCACCACCCACACCTAGTC
AACCTTATTGGCTATTGCGCCGATGGCGACCAGAGGCTTTTGGTTTACGAGTATATGCCGCTGGGTTCTTTGGAAGACCA
CCTTCACGGTATGCTGCTGAAAAAAAGAATGTGTTTCTGCTTTGTTACAGCTTCTATTTGATAATTTAAGTTTCTGTGCT
CACAAGTGGATCCTATTTTATTCAGATCCTTCCCCAGATAAACCCCGCCTTGACTGGAATACAAGGATGAAGATAGCTGC
CGGTGCAGCTAAAGGGCTGGAGCATTTGCATGACAAAACAAATCCTCCTGTCATATACCGGGACTTGAAATGTTCAAACA
TCTTGCTCGGAGAGGGATACCACCCAAAGCTGTCTGACTTTGGATTGGCAAAGCTTGGCCCAGTTGGCGATAAGACGCAC
GTTTCCACCAGAGTGATGGGTACATACGGGTATTGTGCCCCTGAGTATGCTATGACTGGTCAGCTGACTCTGAAGTCAGA
TGTTTACAGCTATGGTGTTGTTCTATTGGAGATCATCACAGGACGAAGGGCTATCGACAACACCCGAGCTGCAGGGGAGC
AAAATCTTGTTGCATGGGTAAGCTGCCGATTTGTTTTTTGTTACGTTCTTTTC---TTTTTC---TTGTTATTCTTTTTC
ATTCCGTTATAGACTACTGGAGTTTAACTGTAGAGAACATCGCA------TTGTGAAACCTGCTACCTCTTGTGAGTATT
GATTGTTAATGTATTCTGGAAAATCCACCGGATATCAGCCTCTTAGCTCGGAAGTTGCGA-AAGCTGAGTGTTAGCGCAT
CAACCTTATGTATCACCTGTATTTCAGT--------------------TCATCTCTGCATTTCTTTCCACTTTTGGAATT
TACACTAATTTTGCTTGAAGGAC---ATATTGTCCTTTCCTTCAGCTGAAAAAACATCGTCCTT------------GCAA
TGTTTTTCAGTTGTAGGGTTACTAAAAAGCTACTGTACTAGAATGAAATAGTTCCATACTACATTTTTTTGGCATTATTG
GATTGGCCTAGGTTTGCCTTCCCAAAA-GACATTATTGCAGTCCGTTGAATAGGATCGAACGAATAGGGTCATGACATGC
CAAAGCCTTTGCTCAAGATGTCGTGTAGCATTTTGCAATCCCTGTTGATGTAACGTTTGTTGGTGCACAATTTCAGGCCC
GGCCCTTGTTCAAGGACAGGAGGAAGTTCCCCCAGATGGCGGACCCAGCGCTGGAGGGCAGGTACCCAGCTAGGGGACTG
TACCAGGCCCTTGCCGTCGCCGCAATGTGCGTGCAAGAACAGCCTACCCTGAGACCGTTGATCGGCGACGTCGTCACAGC
CCTGAGCTACCTTGCCTCCCAGCCCTACGATCCGGAGGTGCACGGCGTCCACCGCCCGTCGCGCCTGACGGCTTCAGGAA
CGCCGCCCCGAGCCCGGAAAGATGGCGCGGATCATCAAAGAGGAGGAAGCGAGTGAGGTTCTGCGGCGATCTGGGAGAAG
CCTGAATTTTGTCGCGGTAAGAGTCCAAAATGGAGATGAAGAGGAATTTTGTGGATAGCAAGGCGGCTTTTGCGTTAACA
TGTTGGGGGGGAATTGTGAATCGGTGATGTATGTTGATCGGTTGGTCTGTCTGGTTGAGATGGTGCTTAGAGATGATGCA
TGCATGTGCTCTCCGGTCAAAGTCTGTATCTAGGTAGATGACGAGGCAGTCGGTGTAACCACCCATGACTTCACTGTTCG
ATCAGTCTATGGACTACCATTTCAACTTGTATTTGACAGAACTGCTTCTCCTTTATCCAGGGTTTGAGGGTTCTAGTGCA
TGTCTGTTTGACTAACAAAGGGACTGGCTAGGGGTCAGTCGCTTGAAAACGAGTTTGTGGCTTTCTCTTCCCCTGACAAC
CACCAATCCAGCCTAGGCTGAACCGCTTGCCTCCACCCCCACAGAGGCCGGAGCCGCTCCCATAACCGCCTCGTCGCTCC
CCTCCCCTCCCCTTCCCCCTCGACTTTTTATCCCGCCGTGCTTTGCCCCTCGGCCATCCATGTAAACCGTTGAACCATCC
AAATTCTTTGATGAACTTGCAATATCAAGTTCCGAACTCGCCTCCACCGGCTATGGTTCGTTAGCCTTTGTTACCGGCCG
CCACGCCATATATACCACTGGAAACGGAGGCTGATTAGTTTGCTGCCAACATTTGATATTGCCAATATTTGGCAAAATCA
CAAGTTGCCAACATTTGACAATCTTTTGTGAGATCGACAACAAAAACTGATCCGTAATTAATCTCTAGCCAACATTTGTC
AGTTATCAAAATTTTGCATCAAACCAATCAGCCTCAAGAGTCGACATAGCGTTACATCACATCTGTGTCAAAATCTCCAA
AATCTTCTTGCCAACGTAACTCTGCATTCCTTTTGTTAATCATGTTCGTGATCGAAATTAGGCTCAGAGTCGACATAGCG
TTACATCATCTTTTAC
>chr2A_381
CCCGC---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------CCTCTATGATCAAAC
TTTGTTTAATTTTCGTCCGTTTCACTTTGATTTCGTCCATGTTTCTAAACTGTCCGTATGAAATGGGGCAAACATCCGAT
GT---------------CGACGTCCTCCCCGCTGTCCACGAACGCGTCCGGAC-TGTCCGCAAACATTCGATGCCGTCTG
TCCGATGATCCGCGGTGGAGTTGCCCTAAGCTCAAGCTCAGTATATTGACGAGCCTTCATAGTCCACGCAGCACCGAACA
AGTTACTGTTTACCCGGCATGGAATGCGGTGCGGCCACTAGCTGGTGTGCGTGCGTG----ACTTTTGCTTTCCGTTTGA
CACTTGCGCCGCGTAGAGTAGCCGTCCCCCGTTCCCCTTCCTTCTGCGTGCGTTGCGTTGCGTTGCGTCCTTCTAGAAGC
AGAGAA--------------------CCCA--ATTAACTCAAAAATCATTTCTTCCTCGTTTTCGCTCCCCCCCTCCCCT
CGCCTCGCCTCGCCTCCCCTTCCTTCCTTCTTCCCCACGCGCACGCGCAACGCGGC------CGCCGCACACTCAAACCT
CCCACCCCTCTCCCCTCTCCCCCTCTCTCTCCCCCCACACCGCCCAAGAAGAGGTCTCAGGAGCCGCCATGGACTGCTGC
TTCCCCTGCCTGGGCGCCAGGAAGAAGCGCAAGACGCCGGCGCGGCCGGAGAAGCCCCAGATCCCTCCCGCCGCAGGTGA
TCCGCCCGTGCCACCGCCTTCTTTCTTGCTGCCTTCTTCCTCGCCCCG---------GCCGTCGCGGATTCGCTAGTCCT
CGCTAGATTCACAGCGTAGTTCGCCGATTCTGCCTGCCACTCCGAGATTCCGCGGAGCAATTTGTGGCTCCGGCCTCGGG
CTGCCCCCGCCGCCGTCCCTCGTTCACGGGCCTCCCGAGCCGTCCCGTCAGTCCAGTTCCCCCCTCCCCTCCCCTGTTTC
AAAAGAAAAAAG----CAGAAAAGTTCGCCCCTCCAGAAAATTGCCGCAAACTCGGTCCAAAATCATGGCATCCCGCCGA
ATCCGCCTCCCCCCGAAACATGGCAGCCCGGTGCCGGGATTCCGGCCTGGGACGACGCGTGCTCGCCACTTTTGTCGCCC
GCCAGACAACGCGTGCACTCCTTTCCCTAAATTCCCCGTCTTCTTTATTCGCCTCATGATTCTGACGCATGCGTTTTGTT
TTTC--TCAGACAATAAAGCGAAGCCGGGGTGCTCCTCGTCGTCGACGAGCGCGGCGGCGGCGGCGCGGCAGGACTCGCT
GTCGGAGGCCAAGAAGGAGTTCGTCCTCAGCAACGGGTCCGAGCACCGCCACATTGCCGCGCAGACCTTCACCTTCAGGG
AGCTCGCGGCGGCGACCAACGGTTTCAGGGCCGACTGCCTTCTCGGGGAGGGTGGCTTCGGCCGGGTCTACAAGGGGTAC
CTGGAGAGCATCAACCAGGTGAGGAGGTTCTTGCTAA-TTATTCTGCCCTCCCAGTTCACGAGCACCATTTTGTTTATTT
AGAAGCTTCCACTTGGAGGATTGTGTGGAGCACTTGTAAATTGTCTCCTAGTGAACGTGTCACACAGCCTGAACCCGAGA
CCGGGTTTAGGCTGCGGGTTTCGTTTTCAATGTGATAGAAAATGAGGGTTATCCAGGTTTCAAGGATTGTGTTTATTAAT
CCTCGGTCGATTTACATTTCACAGCTATTGAGCAATAATGT-----TGTGGTAGAATTGTTAA-TTATGCGCAAGAATTT
GTCAAGCTATTTCCTGAAGCTAATTGACATGGTGAAATGTATTTTGTTGCCGTCACAGGTTGTCGCCATAAAGCAGCTCG
ATCGAAATGGACTGCAAGGCAACAGGGAGTTTCTTGTTGAGGTCCTCATGCTGAGCTTGCTGCACCACCCACACCTGGTC
AACCTTATTGGCTATTGCGCCGATGGCGACCAGAGGCTTTTGGTTTACGAGTATATGCCGCTGGGTTCTTTGGAAGACCA
CCTTCACGGTACGCTGCCGG-AAAAAGAATGTGTTTCTGCTTTGGTACAGCTTCTGTTGGATAATTAAACTTTGTGTACT
CACAACTGGATCCTATTTTATTCAGATCCTTCCCCAGATAAACCCCGCCTTGACTGGAATACACGGATGAAGATAGCCGC
TGGTGCAGCTAAAGGGCTGGAGCATTTGCATGACAAAACAAATCCTCCTGTCATATACCGGGACTTGAAATGTTCAAACA
TCTTGCTCGGAGAGGGATACCACCCAAAGCTGTCTGACTTTGGATTGGCAAAGCTTGGCCCAGTTGGTGATAAGACACAT
GTTTCCACCAGAGTGATGGGTACATACGGGTATTGTGCCCCCGAGTATGCTATGACTGGTCAGCTGACTCTGAAGTCAGA
TGTTTACAGCTATGGTGTTGTTCTATTGGAGATCATCACAGGACGAAGGGCTATCGACAACACCCGAGCTGCGGGGGAGC
AAAATCTTGTTGCATGGGTAAGCTGCCGATTTGTTTTTTGCTACGTTCCTTTC---TGTTTCTTCTTGTTATTCTTCTTC
ATTCCATTATAGACTACTGGAGTTTGAGTAAAGAGAACATCACAATCACATTGTGAAACCTGCTGCCTCTTGTGAGCATT
GATTGTTAATTTATTCTGGAAAATCCACCAGATATCAGCCTCTTAGCTCGGAAGTTAGTCTAAGCTGAGTGTTAGCGCAT
CAACCTTGCGTATCACCTGAAGGGGAACCATAGGAGGTTGATTTTCAGTCATCTCTGTATTTCTTTCCACTTTTGGAATT
TACACTAGTT----TTGCTTGAAGGAATATTGTCCTTTCCTTCAGCTAAAAAAATATCATGCTC------------GCAA
CGTTTTTCAGCTGTAGGGTTACTAAAAAGCTACTGTACTAGAATGAAATAGTTCCATACTACATTTTTTTGGCATTATTG
GATTGGCCTAGGTTTGGCTTCCCAAAAAGACATTATTGTAGTCTGTTCCATAGGATCGAATGAATAGGGTCATGACATGC
CGAAGCCTTTGCTAAAGATGTTGTACAGTATTTTGCAATCCCTACTGATGTAACGTTTGTTGGTGCACAATTTCAGGCCC
GGCCCTTGTTCAAGGACAGGAGGAAGTTCCCCCAGATGGCAGACCCGGCGCTGGAGGGCTGGTACCCGCCAAGGGGACTG
TACCAGGCCCTGGCCGTCGCTGCAATGTGCGTGCAAGAACAGCCGACCCTGAGACCGTTGATCGGCGACGTCGTCACAGC
CCTGAGCTACCTTGCCTCCCAGCCCTACGATCCGGAGGTGCACGGCGTCCACCGCCCGTCGCGCCTGACGGCTTCCGGCA
CGCCGCCCCGAGCCCGGAACCACGGCGCCGATCATCAAAGAGGAGGAAGCGAGTGAGGTTGGGCGGCTT--TGGGAGAAG
CCTGAATTTTGTGGCGATACGAGTCCAGAATGGAGCTGAAGAGGAATTTTGTGGATAGCAAGGCGGCTTTTGCGGTTACA
TGTTGGGA-GGAATTGTGAATCGGTGATGTATGTTGATCAGTTGGTCTATCTGTTGGAGATGGTGCTTAGAGATGATGCA
TGCATGTGCTCTCCGGTCGAAGTCTGTATCTAGGTAGATGATGAGGCAGTCGGTGTAACCACCCATGACTTTACAGTTCG
ATCAGTCTATGGACTACCATTTCTCCTTGTATTTGACAGAAGTGCTTGTCCTTTATCCAGGGTTTGAGGGTTCTAGTTCA
TGCCTGTTTGACTAACGAAGGGACTGGCTAGGGGTCAATCGCTTGAAAACGATTTTGTGGCTTCCTCTTCCTCTGACAAC
CTCCAATCCTGCC-AGGCCAAACCGCCTGCCTCCACC-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>chr2D_576
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------TGGAGTTGCCCTAAGCTTAAGCTCAGCATAGTCACGAGCCTTC-TAGTCCACGCAGCACCGAACA
AGTTACTGTTTACCCGGCATGGAATGCGGTGTGGCCACTAGCTAGTGTGCGTGCGTGCGTGACTTTTGCTTTCCGTTTGA
CACTTGCGCCGCGTAGAGTAGCCGTCCCCCCTTCCTCTTG------------------TGCGTTGCGTTCTTCTAGAAGC
CAAGGCGGAGAAGGG-AGGGCTGCCCCCCA--ATTAACTCAAAAATCATTTCTTCCTCGTTTTCGCTCCCCC------CT
CCCCTCCCCTCCCCTCG----CCTTCCTTCTTCCCCACGCGCACGCGCAACGCGGA------CGGCGCACACTCAAACCT
CCCACCCTTCTCCCC------CCTCTCTCTCTCCCCACCCCGCCCCAGAGGAGGTCCCAGGAAGCGCCATGGACTGCTGC
TTCCCCTGCCTGGGCGCCAAGAAGAAGCGCAAGCCGCCGGCGCCGACCGAGAAGCCCCAGATCCCCCCCGCCGCAGGTGA
TCCGCCCGCACCTCTGCCTTCTTTCTTGCCGTCTTCTTCCTCGCCCTCTCCTCCCCCACCGTCGCGGATTCGTTCATCTC
CGCTAGATTCACACAGTCCTTCGCCGATTCTGCCTGCCACTCCGAGATTCCGCGGAGCAATTTGTGGCTCCGGCTTCCGG
CTCCCCCCGCCGCCGTTCCCGGTTCACGGGGCTCACGAGCCGTCCCGGCAGCCCAGTTCCCCTCTCCCCTGTTTC--TTC
ACAAGAAAAAAGGAAAAAAAAAAGTTCGCCCCTCCAGAATT--GTTGTAAACTCGGTCCAAAATCATGGTATCCCGCCGA
ATCC------CCCCGAAACATGGCAGCTCGGTGCGGGGATTCCGGCCGGGGACGACGCGTGCTCGCCGCTTTTG----CC
GCCAGACAACGCCTGCACTCCTTTCCCCAAATTCCCCGTCTTCTTTATTCGCCTCATGGTTCTGACGCACGCGCTCCGTT
TTTTCTTCAGATAATAAAGCGAAGCCGGGATGCTCCTCGTCGTCGACGAGCGCGGCGGCGGCGGCGCGGCAGGACTCGCT
GTCGGAGGCCAAGAAGGAGTTCGTCCTCAGCAACGGGTCCGAGCACCGCCACATTGCGGCCCAGACCTTCACCTTCAGGG
AGCTCGCCGCGGCGACCAACGGCTTCAGGGCCGACTGCCTTCTGGGGGAGGGTGGCTTCGGCCGGGTCTACAAGGGGTAC
CTGGAGAGCATCAACCAGGTGAGGAGGTTCTTGCTAA-TTATTCTTGCTTCACAGTTCATTAGCACTGCTTTGTTTATTT
AGAAGCTTCCACTTGGAGGATTGTGTGGAGCACTTGTAAATTGTCTCCTAGTGAACGTGTCACACAGCCTGAACCCGAGA
CCGGGTTTAGGCTGCGGGTTTCCCTGTCGAAGTAATAGAAAATGGGGGTTATCCAGGTTCCAAGGATTGTTGTTATTAAT
CCTCGGTTGATTTACATT-CACAACTGTTGAGCAATAACATTAACATGTGGTAAATTTTGTAA-TTATGCGCAAGAATTT
GTCAAACTATCTCCTGAAGCTAATTGACATGGTGAA---TATTTTGTTATCATCATAGGTTGTTGCAATAAAGCAGCTCG
ATCGAAATGGACTGCAAGGCAACAGGGAGTTTCTTGTTGAGGTCCTCATGCTGAGCTTGCTGCACCACCCACACCTGGTC
AACCTTATTGGCTATTGCGCCGATGGCGACCAGAGGCTTTTGGTTTACGAGTATATGCCGCTAGGTTCTTTGGAAGACCA
CCTTCACGGTATGCTGCTGAAAAAAAGAATGTGTTTCTGCTTTGGTACAGCTTCTATTGGATAATTTAAGTTTGTGTACT
CACAACTGGATCCTATTTTATTCAGATCCTTCCCCAGATAAACCCCGCCTTGACTGGAATACACGGATGAAGATAGCTGC
CGGTGCAGCTAAAGGGCTGGAGCATTTGCATGACAAAACAAATCCTCCTGTCATATACCGGGACTTGAAATGTTCAAACA
TCTTGCTCGGAGAGGGATACCACCCAAAACTGTCTGACTTTGGATTGGCAAAGCTTGGCCCAGTTGGCGATAAGACACAC
GTTTCCACCAGAGTGATGGGTACATACGGGTATTGTGCGCCTGAGTATGCTATGACCGGTCAGCTGACTCTGAAGTCGGA
TGTTTACAGCTATGGTGTTGTTCTATTGGAGATCATCACAGGGCGAAGGGCTATCGACAACACTCGAGCTGCGGGGGAGC
AAAACCTTGTTGCATGGGTAAGCTGCCGATTTGTTTTTTGTTACGGTCCTTTCTGTTTCTTC---TTGCTATTCTTCTTC
ATTCCATTATAGACTACTGGAGTTTTACTATAGAGAGCATCACA------TTGTGAAACCTGCTACCTCTTGTGAGTATT
GGTTGTTAATTTATTCTGGAAGATCCACCAGATATCAGCCTCTTAGCTCGGAAGTTGCG-TAAGCTGAGTGTTAGCGCAT
CAATCTTACGTATCACCTGAAGGGGAACCATAGGAGGTTGATTTTCAGTCATCTCTGTATTTCTTTCCACTTCTGGAAGT
TACACTAGTT----TTGAAGGAC---ATATTGTACTTTCCTTCAGCTCAAAAAATATCGTCCTTACAATTTCTGAGGCAA
CGCTTTTCGGTTGTAGGGTTACTAAAGAGCTACTGTACTAGAGTGAAATAGTTCCATACTACATTTTTTTGGCATTATTG
GATTGGCCTAGGTTTGCCTTCCCAAAAAGACATTATTGTAGTCTGTTGAATAGGATCGAATGAAGAGGGTCATGACATGC
CAAAGCCTTTGCTCAAGATGTCGTATAGCATTTTGCAATCCCTGTTGATGTAACGTTTGTTGGTGCACAATTTCAGGCCC
GTCCCTTGTTCAAGGACAGGAGGAAGTTCCCCCAAATGGCAGACCCGGCGCTGGAGGGCCGGTACCCGGCAAGGGGACTG
TACCAGGCCCTGGCCGTCGCCGCAATGTGCGTGCAAGAACAGCCAACCCTGAGGCCGTTGATCGGCGACGTCGTCACAGC
CCTGAGCTACCTTGCCTCCCAGCCCTACGATCCGGAGGTGCACGGCGTCCACCGCCCGTCGCGCCTGACGGCTTCCGGCA
CGCCGCCCCGAGCCCGGAACCACGGTGCCGATCATCAAAGAGGAGGAAGCGAGTGAGGCGGTGCGGCTT--CCGGAGAGC
CCTGAATTTTGTCGCGGTACGAGTCCAAAATGGAGCTGAAGAGGAATTTTGTGGATAGCGAGGCGGCTTTTGCGTTTACA
TGTTGGGGGGGAATTGTGAATCGGTGATGTATGTTGATCGGTTGGTCTATCTGGTTGAGATGGTGCC-AGAGATGATGCA
TGCATGTGCTCTCCGGTTAGAGTATGTATCTAGGTAGATGACGAGGCAGTCGGTGTAACCACCCATGACTTTACAGTTCG
ATCAGTCTATGGACTACCATTTCTCCTTGTATTTGACAGAACTGCTTCTCCTTTATCCAGGGTTTGAGGGTTCTATTGCA
TGTCCCTTTGACTAACAAAGGGACTGGCTAGGGGTCAGTCGCTTGAAAACGATTTTGTGGCTTCCTCTTCCTCTGACAAC
CGCCAATCCAG-----GCCGAACCGCCTGCCTCCACCC------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
>SNPs
SSS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S-----------
-------S-S----S--------SS--S------S---S--S-S--S---SS-----S----S----SS----S-SS---
-SSSSSSSSSSSSSSSS--S-S---SS--SS-S----S-S-----S-------S-------S-S-S---------S--S-
-SS-----------------S------------------S--S---S------------S--------------------
--------------------------------------------------------------------------------
---------------------------S----------SSSS-SS-----------------------------------
----S-SS--SS-S-S-----S--------SS--------------------S-------------------S-------
--------------------------------------------------------SSSSSS---S--------------
------S----------------SS----------------S---------------SS---------------------
----------------------S----------------S----------------------------------------
-------S------------------------------------------------S-------------S---------
---S--------S----S------------------------------------S-SSS---S-----------------
--------------------------------------------------------------------------------
S---------S---------------S---------------S-----------S-S-----------------------
----------------------------------------------------S-------------------S-------
--------------------------------S-----------------------------------------------
----SSSSS----------S------------------S----------S------------------------------
------------------S--S--------------S-------------------------------------------
----------------------------------------------------S---------------------------
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------S-----
---------------------------------S-------------------------SS--S------SS-S------
----------------------S---------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
--------------------------------------------S-------------S--------------S---S--
-----S---------------------------------------------------------S----------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------------------------------------
------------------------------------------------------------------------S-------
------------------------------------------------S---------------------------S---
-----S-------------------S---S-----------S--------------------------------------
----------S------------------S-----------------------------S--------------------
--------S----------S-SSSS-SS-----------------------------S----------------------
-------S--SSSS---------------------------------S------S-------------------------
S-------------------------------------------------------------------------------
--------------------------------------S----S----------------S-------------------
------------------------S-------------------------------------------------------
----------------------------------------S-----S------------S-------S--S---------
-----------S--------------------------------S-----------------------------------
---------------------------------------------------------------------------S--S-
-------------------SS-S-----S-------------------------------S------SSSS---------
-------------------S---------------S----------------------------------------S---
------------------------------------------------S-------------------------------
-----------------------------------------------------------------------S--S-----
-----------------------SS-------------------------------------------------------
----------------------------------------------------S----------S-------S--------
-S-----------S----S-------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSS
>forward_442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------CGGTTCGATTTCATCCGTGC--------------------------------------
--------------------------------------------------------------------------------
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----------------
>reverse_1387
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------GGCCCCTCCAGAAAATCGTT----------------------------------
--------------------------------------------------------------------------------
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----------------
>forward_1213
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------------------------------------TCATCTC
CGCCAGATTCACG-------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2717
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------GCAC
GTTTCCACCAGAGTGA----------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1263
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-------------------------------------------CCGATTCCGCGAACTGATTC-----------------
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>reverse_2873
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------------------------------------------------------------------------AGGGGAGC
AAAATCTTGTTGC-------------------------------------------------------------------
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----------------
>forward_1361
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------CCCCCTCCCCTGTTTCTTC
T-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3100
--------------------------------------------------------------------------------
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-----------------------------------------------------------AAAGCTGAGTGTTAGCGCATC
--------------------------------------------------------------------------------
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----------------
>forward_1699
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------T
GTCGGAGGCCAAGAAGGAT-------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------
>reverse_3645
--------------------------------------------------------------------------------
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--------------------------------------------TACCCTGAGACCGTTGATCG----------------
--------------------------------------------------------------------------------
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----------------
>forward_3100
--------------------------------------------------------------------------------
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----------------------------------------TCTTAGCTCGGAAGTTGCGA--------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------
>reverse_4496
--------------------------------------------------------------------------------
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---------------CACTGGAAACGGAGGCTGAT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------
