>input_sequence_29363
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-----------------------ATGGCCTTCTTCCTCCTCCTCCTGTGCATCCTCATTTCTGTGGCCATCGTGTCCTAC
GCCCACCACGTAATCCGGCGGCAACGCCGGGGCCCGCAGGGCAGCGC------TCGTGGCCGCCATGAGAAAGCCGCCCT
CAAGCTGCCCCCTGGCTCCATGGGCCTGCCTTACATCGGCGAGACCCTCCAGCTCTACTCCCAGGACCCCAGCGTCTTCC
TCTCCTCCAAGCAGAAGCGGTACGGCGAGATCTTCAAGACGCACCTCCTCGGCTGCCCGTGCGTGATGCTGGCGAGCCCG
GAGGCGGCGCGCTTCGTGCTGGTGTCGCGGGCGCACCTCTTCAAGCCGACGTACCCGCGGAGCAAGGAGCGCCTCATCGG
CCCCTCGGCGCTCTTCTTCCACCAGGGCGACTACCACCTCCGCCTCCGCAGGCTCGTCCAGGGCCCGCTCGGCCCCGAGG
CCCTGCGCAAGCTCGTGCCGGACATCGAGGACGCCGTGCGGTCCACGCTCGCGGCCTGGGCGGACGGCGACGCCGCCAGC
ACTTTCCACGCCATGAAGAGGGTAAGCTATAGCT--------------AGCTGCGCGCGTAGTTGTTGTCCGGGAGTGAT
GCCAGTGGCGTATGATATTAATCAGTGCATATTTTGTTTTCGTCAGCTCTCGTTCGACGTCGGCATCGTGACGATCTTCG
GCGGGCGGCTGGACGAGCGGCGGAAGGAGGAGCTGAGGCGGAACTACGCCGTCGTGGAGAAAGGCTACAACTCCTTCCCC
AACGGCTTCCCCGGGACGCTATACTACAAGGCGATCCAGGTAAGCAACCGACGAAAACCGTGCGCCTTCGTCACGT---T
CGTCGTGGTGTATACGTCTTTAACAGTATCAGCACAACAATACACATGAATGCCATGTAACGGAAAAC-------CGCAT
GTAGGCGAGGCGGCGGCTGAACGGCGTGCTGAGCGACATCCTGCACGAGCGGAGGGAGCGTGGGGAGCCCGGCGACGACC
TGCTCGGCTGCCTCATGCGGTCACGGGCAGGCGGCGGCGACGACGACGACGAGGAGGAGGGCGCGCTGCTGACGGACGAG
CAGGTCGCCGACAACGTCATCGGCGTGCTGTTCGCGGCGCAGGACACGACGGCCAGCGTGCTCACCTGGATCGTCAAGTA
CCTCCACGACCGGCCGAAGCTGCTGGAGGCCGTCCGGGCGGAGCACGCGGCGATCCACGAGGCCAACGACGGCGGGAGGC
GGCCGCTGACATGGGCGCAGACGAGGAGCATGACGCTGACGCACAGGGTGCGTGCCATACACTTCAAGGCTTACAGTCAC
ATGTTTTTCTTGTGCCGTGCGGCTGCTGATCGATGTCGTCCGTCGTACGCGCGCGCAGGTGATTTTGGAGAGCCTGAGGA
TGGCGAGCATCATCTCCTTCACGTTCAGGGAGGCCGTGGCCGACGTGGAGTACAAAGGTACGTACGTACGCG----ACGC
CTGGGCCATCACGTGCACAGCAGCTAGCTAAGCTAGGGTGGACGTGGCGCTACGTAGACGTGGCGTTACCGTGCATGGGA
TTTAATTCCGGACGGTGCGACGATGATGAGGACGATGGGACCTGACGTAAAATTTTGCCTGGCGTGCAGGGTTTCTTATC
CCCAAGGGGTGGAAGGTGATGCCGCTATTCAGGAACATCCATCACAGCCCGGACTACTTCCAGGATCCACAGAAGTTCGA
CCCTTCGAGATTCAAGGTACGTACGCGTCCCCCTCGCCGGAGTGCAACCTCGATGTGGATGCGTCCGGCCGAACTGAAAA
TCGTGACCTTCAAAAAAGGAGCAACCGAAAAATTGTTCCTTTCGATGCATTAAATCGTGTCCTTCA----TCGGTCAATA
CACTCCATTCATGAGTACGGCAGCAAATAG-----------CCTGGTGAACACGGTGTTAAATACC------ACTTGAAC
ACGGTTAAATCTTGACGATACATGCCCTATCTAGAATACTTGAATCCGCCTTTGTTT-CCCAGATTAGTAAAACCAACTT
TTTTACGGGGCCTCATTTTCTTGTGGTGGTAAAACCTGCAGGTGGCGCCGCGGCCGAGCACCTTCACGCCGTTCGGGAGC
GGGGTGCACGCGTGCCCCGGGAACGAGCTGGCCAAGCTCGAGATGCTGGTGCTCATCCACCACCTCGTCACCGGCTACAG
GTGCGTGCCC----CCCTC----TCCACACAGATCCTCGATATATCGCCG-------TTTGTCCGTGCGGACAGGAACGT
CCCATGGCTGGCTGGTGCAGTGGCGCCAATTCACCGGGCCACCCTTCGCCTGGCGCCCAGTTCCACGGCACGCATACTCC
AACCATGCACCGATCGTGTCATGTCATGCCATGAAAGCCCGGGTGGTCCATGGCTGCCCGCCCTGCCTTGCACGTAGAGG
CGCCTGCCTATGAGCTG---------TGCTGCCACTGATCACTCGCTGCCATGGCGACAGCTGTGGAGTTGTACGTGTGC
TAGATTTAGGTAGGAATGGGGGTGATGATTGATGCGTGTTGGTGCTTGGTTTTTGCAGGTGGGAGGTTGTTGGATCGAGC
GACGACGTCGAGTACAGCCCATTCCCTGTTCCCCGCCATGGCCTACTCGCCAGGTTACGGCGGGATGACAGCGTCTGCGT
GGGTAGGAAGGGGTGCCCGACTGATGACGACTACGACGACGAAGACGAAGTGATAGTGTGA-------------------
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-------------------------------------------------
>chr5A_1_TraesCS5A01G238000
CTAGTTTGTGGTGATTGAACTATGTTGTGATGCGCTTATTGTATGAACTATTGTAGAAAATTAGCCATAAATTC--TTTT
CAAGCAAACAAACATTAAAATAGGAAAAATCAAGTTAGAAAAACAAGATTATCGTAATCCACCAGAATATCAAACACAAT
CGAATTGTCACAGTACATGCCATGCAAAATAGAAACTC------------------------------------------
--------------------------------------------------------------------------------
-TCCTGCTATGCCTTAATAAGAAAACCTTGTGTGAATGTGTGTGTATAAATACAAGATCGAAACAAACACCATCGACAAT
AAATCACATGCGAAATTTCTACTCCCGACACATGCCTAATCACCGTAGTGCATATCATTTGCATG--TTAGAACCTATTA
CATCCCTTTAAATCCAACAAGTCCTAAAGTGACGAGTCAAATGTTAGCTGCCAACGATGTGCGTGCGTGTCTGATGCCAA
CATTTTGATAGTGGTAGTTCTC--------TGATTAGTCATGTTTGCCATAAAAAAAAGTGTGAGCTCTTTCTTCTTCAA
AA-------AAATAAATAAAGTGTGAGTTCCCTCTTAAAGCTTACCCATGGCTTGGGCAAC-ACTAGCTCTGCAAAGCAT
CAGTGGAAGCAACCTGTTTTTCTTTTGCCGGTGCTGAACTTGTAATGCAACTTGACTTTGGCTTTCACCATATATGAAGC
TGTGGTTCCCTTGTTGCTCCAGAAAAATGCAGCAATGTAAGAAGAAAAGTTGTCCTCTTCACTTTGACATTTCACACCTA
GAGCTGCCAGCCCAGCAGCCCAAGAGCCTCCAAATCGGCCTCTCGCTTTCCGGCCCCATCTATAAATACCGCGGCGAGGC
CTTCCCACGCCCTCCACCATTCGAAAGATCCACCGAAGATTTTTCTCCTCACTCTCCTCGACCTCACAGCTCTCCGTCTC
CCGATCTCCTCTGCCAGCAGCGCAGATTTACAGACACAAGCTAGCACACAGCAAGCTCAGAGCACCTCGCTGGTCTAAGT
GATCCTTCTCAAGGATCATTTGGATGGCCTTCTTCCTCCTCCTCCTGTGCATCCTCATTTCTGTGGCCATCGTGTCCTAC
GCCCACCACGTAATCCGGCGGCAACGCCGGGGCCCGCAGGGCAGCGC------TCGTGGCCGCCATGAGAAAGCCGCCCT
CAAGCTGCCCCCTGGCTCCATGGGCCTGCCTTACATCGGCGAGACCCTCCAGCTCTACTCCCAGGACCCCAGCGTCTTCC
TCTCCTCCAAGCAGAAGCGGTACGGCGAGATCTTCAAGACGCACCTCCTCGGCTGCCCGTGCGTGATGCTGGCGAGCCCG
GAGGCGGCGCGCTTCGTGCTGGTGTCGCGGGCGCACCTCTTCAAGCCGACGTACCCGCGGAGCAAGGAGCGCCTCATCGG
CCCCTCGGCGCTCTTCTTCCACCAGGGCGACTACCACCTCCGCCTCCGCAGGCTCGTCCAGGGCCCGCTCGGCCCCGAGG
CCCTGCGCAAGCTCGTGCCGGACATCGAGGACGCCGTGCGGTCCACGCTCGCGGCCTGGGCGGACGGCGACGCCGCCAGC
ACTTTCCACGCCATGAAGAGGGTAAGCTATAGCT--------------AGCTGCGCGCGTAGTTGTTGTCCGGGAGTGAT
GCCAGTGGCGTATGATATTAATCAGTGCATATTTTGTTTTCGTCAGCTCTCGTTCGACGTCGGCATCGTGACGATCTTCG
GCGGGCGGCTGGACGAGCGGCGGAAGGAGGAGCTGAGGCGGAACTACGCCGTCGTGGAGAAAGGCTACAACTCCTTCCCC
AACGGCTTCCCCGGGACGCTATACTACAAGGCGATCCAGGTAAGCAACCGACGAAAACCGTGCGCCTTCGTCACGT---T
CGTCGTGGTGTATACGTCTTTAACAGTATCAGCACAACAATACACATGAATGCCATGTAACGGAAAAC-------CGCAT
GTAGGCGAGGCGGCGGCTGAACGGCGTGCTGAGCGACATCCTGCACGAGCGGAGGGAGCGTGGGGAGCCCGGCGACGACC
TGCTCGGCTGCCTCATGCGGTCACGGGCAGGCGGCGGCGACGACGACGACGAGGAGGAGGGCGCGCTGCTGACGGACGAG
CAGGTCGCCGACAACGTCATCGGCGTGCTGTTCGCGGCGCAGGACACGACGGCCAGCGTGCTCACCTGGATCGTCAAGTA
CCTCCACGACCGGCCGAAGCTGCTGGAGGCCGTCCGGGCGGAGCACGCGGCGATCCACGAGGCCAACGACGGCGGGAGGC
GGCCGCTGACATGGGCGCAGACGAGGAGCATGACGCTGACGCACAGGGTGCGTGCCATACACTTCAAGGCTTACAGTCAC
ATGTTTTTCTTGTGCCGTGCGGCTGCTGATCGATGTCGTCCGTCGTACGCGCGCGCAGGTGATTTTGGAGAGCCTGAGGA
TGGCGAGCATCATCTCCTTCACGTTCAGGGAGGCCGTGGCCGACGTGGAGTACAAAGGTACGTACGTACGCG----ACGC
CTGGGCCATCACGTGCACAGCAGCTAGCTAAGCTAGGGTGGACGTGGCGCTACGTAGACGTGGCGTTACCGTGCATGGGA
TTTAATTCCGGACGGTGCGACGATGATGAGGACGATGGGACCTGACGTAAAATTTTGCCTGGCGTGCAGGGTTTCTTATC
CCCAAGGGGTGGAAGGTGATGCCGCTATTCAGGAACATCCATCACAGCCCGGACTACTTCCAGGATCCACAGAAGTTCGA
CCCTTCGAGATTCAAGGTACGTACGCGTCCCCCTCGCCGGAGTGCAACCTCGATGTGGATGCGTCCGGCCGAACTGAAAA
TCGTGACCTTCAAAAAAGGAGCAACCGAAAAATTGTTCCTTTCGATGCATTAAATCGTGTCCTTCA----TCGGTCAATA
CACTCCATTCATGAGTACGGCAGCAAATAG-----------CCTGGTGAACACGGTGTTAAATACC------ACTTGAAC
ACGGTTAAATCTTGACGATACATGCCCTATCTAGAATACTTGAATCCGCCTTTGTTT-CCCAGATTAGTAAAACCAACTT
TTTTACGGGGCCTCATTTTCTTGTGGTGGTAAAACCTGCAGGTGGCGCCGCGGCCGAGCACCTTCACGCCGTTCGGGAGC
GGGGTGCACGCGTGCCCCGGGAACGAGCTGGCCAAGCTCGAGATGCTGGTGCTCATCCACCACCTCGTCACCGGCTACAG
GTGCGTGCCC----CCCTC----TCCACACAGATCCTCGATATATCGCCG-------TTTGTCCGTGCGGACAGGAACGT
CCCATGGCTGGCTGGTGCAGTGGCGCCAATTCACCGGGCCACCCTTCGCCTGGCGCCCAGTTCCACGGCACGCATACTCC
AACCATGCACCGATCGTGTCATGTCATGCCATGAAAGCCCGGGTGGTCCATGGCTGCCCGCCCTGCCTTGCACGTAGAGG
CGCCTGCCTATGAGCTG---------TGCTGCCACTGATCACTCGCTGCCATGGCGACAGCTGTGGAGTTGTACGTGTGC
TAGATTTAGGTAGGAATGGGGGTGATGATTGATGCGTGTTGGTGCTTGGTTTTTGCAGGTGGGAGGTTGTTGGATCGAGC
GACGACGTCGAGTACAGCCCATTCCCTGTTCCCCGCCATGGCCTACTCGCCAGGTTACGGCGGGATGACAGCGTCTGCGT
GGGTAGGAAGGGGTGCCCGACTGATGACGACTACGACGACGAAGACGAAGTGATAGTGTGATTAGTCAACGTAGATAGCT
AGAGGGCTCTTTTCTCCCTTTTTGTTGTTGTTGCTATTGTTGT------GGCATTCTTCTCTATGAAAATCATTAGAGAA
GAAACAACAGCATGTTACTACTTTTTAGGAGGACGATGATCATGTACCATAGTGCTTATGTTGTCAATGATGTATTGTCA
TTGATACGCACATAAAATGACGCTTCCTTTTTTTC------------GAAATATTGCACTCCAGACCCCCTACCACCACA
-------CTCGAAAGCCCCCCCCCCCTCTC--------------------------------------------------
---------------------------------------------------TCTCTCTCTCTCTCTCT------------
-------------CCAAAGGTCTCAGGGAGATCTATCAATCGGG-----------GAGTTGATGATGTGCGACACACATT
GCCGAGTTGACTTCGTCTCTGATTTATGGGCGGCGGGCCTACTCGTTTTCCGGTCGGGTTTCCTTCTCCGGCGAGGATCC
ACACGGAGGGTGGTGTTGCTCGACAACGAGGAGCCGTTCATCGACAGCCGAGGAGCCGAGTGGAGGACCGATTCGAGGAG
GGAGGCCTGGTATGTTCCCTTGTCACCTAGCACGTATATGTGGGCACGTGGACCACGATGCACGCGAGGCGAAGTGTCTC
A--ATGAGTGCCCTACATGTGGGGCTGTGAGAGGGGAGCG-TCCATTGACCCCTTGCCTTCTGGCGAGCGCTCTCCTTTC
TGCATTCGGTTGCAGTGAAGAAAGGTGCAACCGAATCCAGTTCTAGCCATGAGGATGGAGCGGAGCACGGGTTGGAGGTG
TATGCAGGAGGAGATGCAAGCAAGCTGGAGAAAGCGAATGAGGTCCTCTCCTGGTTCCCCAAAGTGAAGGAGATCC----
--------------------------------------------------------------------------------
-------------------------------------AGTGCAGCGTGCT------------------------------
--------------------------------------------------------------------------------
------------------------------CGCTGGGCTTCGTATTGCTCCAAGATTGGCAACCCTCAGAACCTACCAAT
GGATGTGAATGCGGTGGCGCTAGCGATTCCGAAATCACTTGCATAACAAGGCATATTTTTGC--CTCTATCATGAATAGG
TCATCCGAATCCCCACCTACATTATATTTTTGTAAGAAAATATAGGATG
>chr5B_1
CTAGTTTGCGGTGATTGAACTATGTTGTGATGCGCTTATTTTATGAACTGTTGTAGAAAATTAGCCATAAAAGCTTTTTT
CAAGCAAACAAACATTAAAATAGGCAAAATGAAGTTAG-AAAACAAGATTATCGTAATCCACCAGAGTATCAAACACATT
CG-ATTGTCACAGTACACACCATGCAAAATAGGGGCACAATGGATAACATCTCTCTCTCTCTCTCTCTCTCTCTCTCTAT
CTCTATCTCTCTCTCTCTCTCCCTCTCTCTCTCTCTCATTGCATTGCAGTTTCCAGCTTTTTTTATGCAATGGAAAAAAA
TTCCTGCTATTCCATAATGAGAAAACCTTGTGCAAATGTGTTTGCAGAAATGCAAGATCGAAACAAACACCATCGACAAT
AAATCACATGCGAAATTTCTACTCCCGACGCATGCTTAATCACCGTAGTACATATCATTTGCAAGATTTAGAACCTATCA
AATCTTTTTAAATCCAAGGAGTCCTAAAGTGATGAGTCAAATGTTAGCTGCCAACTATGTGCGTGCGTGTCTCATGCCCA
CATTTTGATAGTGGTAGTTCTCTGATTACTTGATTAGTCATGTTTGCCATAAAAAA--GTGTGATCTCTTTCTTCTTCAA
TAAATAAATAAATAAATAAAGTGTGAG----CTCTTAAAGCTTACCCTTGGTTTGGGCAAATACTAGCTCTGC-AAGCAT
CAGCGGAAGCAGCCTGTTTTTCTTTCGCCGGTGCTGAACTTGTAATGCAACTTGACTTTGGGTTTCACCATATGAAGCTG
T--------------------GAAAAATGCAACAATGTAAGAAGAAAAATTGTCCTCTTCACTTTGACGTTTCACACCTA
GGCTTGCCAGCCCAGCAGCCCAAGAGCCTCCAAATTGGCCTCTCGCTTTCCGGCCCCATCTATAAATACCGCGGCGAGGC
CTTCCCACGCCCTCCACCATTCGAAAGATCCACCGAAGATTTTTCTCCTCACTCTCCTCGACCTCACAGCTCTCC-----
---------TCTGCCAGCAGCGCAGATTTATAGACACAAGCTAGCACACAGCAAGCTCAGAGCACCTCGCTGGTCTAAGT
GATCCTTCTCAAGGATCATTTGGATGGCCTTCTTCCTCCTCCTCCTGTGCATCCTCATTTCTGCGGCCATCGTGTCCTAC
GCCCACCACGTAATCCGGCGGCAACGCC---------AGGGCTGCGC------TCATGGCCGCCATGAGCAAGCCGCCCT
CAAGCTGCCCCTTGGCTCCATGGGCCTGCCTTACATCGGCGAGACCCTCCAGCTCTACTCCCAGGACCCCAGCGTCTTCC
TCTCCTCCAAGCAGAAGCGGTACGGCGAGATCTTCAAGACGCACCTCCTCGGCTGCCCGTGCGTGATGCTGGCGAGCCCG
GAGGCGGCGCGGTTCGTGCTGGTGTCGCGGGCAAACCTGTTCAAGCCGACGTACCCGCGGAGCAAGGAGCGCCTCATCGG
CCCGTCGGCGCTCTTCTTCCACCAGGGCGACTACCACCTCCGTCTCCGCAGGCTCGTCCAGGGCCCGCTCGGCCCCGAGG
CCCTGCGCAAGCTCGTGCCGGACATCGAGGCCGCCGTGCGGGCAACCCTCGCGGCCTGGGCGGACGGCGACGTCGCCAGC
ACCTTCCACGCCATGAAGAGGGTAAGCTATAGCAGCTAACTCG--CTCAGCTGCGCGTGTAGTTGCTGTCCAGAACAGCG
CTAGTGTTG----GATATTAATCAGTGCATATGTTGTTTTCGTCAGCTCTCGTTCGACGTCGGCATCGTGACGATCTTCG
GCGGGCGGCTGGACGAGCGGCGGAAGGAGGAGCTCCGGCGGAACTACGCCGTCGTGGAGAAAGGCTACAACTCCTTCCCC
AACAGCTTCCCCGGGACGCTATACTACAAGGCGATCCAGGTAAGCAACCGACGAAAACCGTGCGCCTTCGTCACGTTCGT
CGTCGTGGTGTATACGTCTTTAATATCAGCAGCACAACAATATACACGAATGCCATGTGACGAAAAG--------CGCAT
GCAGGCGAGGCGGCGGCTGAACGGCGTGCTGAGCGACATCCTGCACGAGAGGAGGGAGCGGGGCGAGCCCGGCGACGACC
TGCTCGGCTGCCTCATGCGGTCGCGGGCCGGCGGT---------GACGACGGCGACGAGGGCGCGCTGTTGACGGACGAG
CAGGTCGCCGACAACGTCATCGGCGTGCTGTTCGCGGCGCAGGACACGACGGCCAGCGTGCTCACCTGGATCGTCAAGTA
CCTCCACGACCGGCCGAAGCTGCTGGAGGCCGTGAGGGCGGAGCACGCCGCGATCCACGAGGCCAACGACGGCGGGAGGC
GGCCGCTGACATGGGCGCAGACGAGGAGCATGACGCTGACGCACAGGGTGCGTGCCATACACTTCAAGGCTTACAGTTAT
ATG-TTTTCTTGTACCGTGTGGTTGCTGATCGATGTCGCCCGTCGTACGCGCGCGCAGGTGATTTTGGAGAGCCTGAGGA
TGGCGAGCATCATCTCCTTCACGTTCAGGGAGGCCGTGGCCGACGTGGAGTACAAAGGTACGT----ACGCG----ACGC
CTGGGCCATCACGTGCACAGCAGCTAGCTAAGCTAGGGTCGACGTGGCGCTACGTAGACGTGGCGTTGCCGTGCATGGGA
TTTAATTTGGGACGGTGCGACGATGATGAGGATGATGCGACCTGACGTAAAATTTTGCCTGGCGTGCAGGGTTTCTTATC
CCCAAGGGGTGGAAGGTGATGCCGCTCTTCAGGAACATCCATCACAGCCCGGACTACTTCCAGGATCCACAGAAGTTCGA
CCCTTCGAGATTCAAGGTACGTACGCGTCGCCCTCGCCGGAGTGCAACCTCGATGTGGATGCGTCTGGCCAAACTGAAAA
TCGTGACCTTCAAAAAAGCAGCAACTGAAAAATTGTTCCTTTCGATGCATTAAATCGTGCCCTTCATTGGTCAGTCAATA
CGCTCCATTCATGAG------------TACGACAACAGTAACCTGGTGAATACGGTGTTAAATAAGTACACTACTTGAAC
ACGGTTAAATCTTGACGATACATGCCCTATCTAGAATACTTGAATCCGGCTTTGTTTCCCCAGATTAGTAGAGCCAAC-T
TTTTACGGGATCTCATTTTCTTGTGGTGGTGAAACATGCAGGTGGCGCCGCGGCCGAGCACCTTCACGCCGTTCGGGAGC
GGGGTGCACGCGTGCCCCGGGAACGAGCTGGCCAAGCTCGAGATGCTGGTGCTCATCCACCACCTGGTCACCGGCTACAG
GTGCGTGCCCCCCTCCCTC----TCCACACAGATCCTCCATATATTCCCATTTGTGATTTGTCCCTGTGGACAAGAACGT
CCCA----TGGCTGGTGCAGTGGCGCCAATTCACCGGGCCACCCTTCACCTGGCGCCCAGTTCCACGGCACGCATACTCC
AACCATGCACCGATCGTGTCCTGTCATGTCATGAAAACCCGGGTGGTCCTCCGCTGCCCGCCCTGCCTTGCACGTAGAGG
CGCCT----ATGAGCTG---------TGCTACCGCTGATCACTCGCTGCCATGGAGACAGCTGTGGTACTAAATC-----
--GGTTTAGGTAGGAATGGGGGTGATGATTGATGTGTGTTGGTGCTTGGTTTTTGCAGGTGGGAGGTTGTTGGATCGAGC
GACGACGTCGAGTACAGCCCATTCCCTGTTCCCCAGAACGGCCTGCTCGCCAGGTTACGGCGGGATGACAGCGTCTGCGT
GGGTAGGAAGGGGTGCGCGACTGATGACAACTACGACGACGAAGACGAAGTGATAGTGTGATTAGTCAACGTAGATAGCT
AGAGGGCCCTTCTCTCCTTTTTTGTTGTTATTGTTGTTGTTGTTGTTGTGGCATTCTTCTCTAGGAAAATCATTAGAGAA
GAAACAACAGA-----ACGACTTTTTAGGATGACGATGATCATGTACCGTAGTGGTTATGTTGTCAATGATGTATTGTCA
TTGATACACGCATAAAATGACGCTTCCTTTTTCCGTAATATTGCATTGAAACAATTCACTTCAGCCCCCCTACGACCACA
CTCATAACTCGAAAGCACCCTCTCTCTCTC--------------------------------------------------
---------------------------------------------------TCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCCCAACGGTCTTAGGGAGATCTATCGATTGGGAGGGAGGTAGTGAGTTGATGATGTGCGACACACATT
ACCGAGCTGACTTCGTCTCCGATCTATGGCCGGCGAGCCTACTCGTTTTTCGGTTGGGTTTCCTTCTCCGGCGAGGATCC
ACGCGGAGGGTGTTGCTGCTCGACAACGAGAAGCGGTTCATCGAAAGCCAGGGAGCCAAGTGAAGGACCGATTCGAGGAG
GAAGGCCTGGTATGTTCCCCTGACACCTGACACGTATACGTGAGCATGTGGACCACAATGCACGGGAGGTGAAGTGGCTC
CCCATGAGTGCCCCGGAGGTGGGGCTGTGAGAGGGGAGCG-TCCATTGACCCCTTGCCTTCTGGCGAGCGCTCTCCTTTC
TCC-------------------------------ATTCAGTTCTGCCCATGGGGATGGACCGGAGCGCGGATTGGAGGTA
TATGCAGGAGGAGGTGCAAGCAAGCTGGAGAAAGCGAATGAGGTCCTCTCCTGCTTCCCAAACGTGAAGGAGTTAATCAA
GGAGGTGATCATTGTGACTATGGATGCGAACATGGATGAGATTGCAAGATGTTTTTTTTGGGGTGGGGGTATGGATATTA
AGATTTAGGCGATGGAGGAGGCGGATTCAGCAAATCTAGTCCAGCGTGCT------------------------------
--------------------------------------------------------------------------------
------------------------------CGCCAGGCTTTGTATTACTCCAAGAGCGGCGACCCTCAGAACCCACCAAT
TGATGCGAATGTGGTGGCGTTGGCGATTCCGACATCACGTGCATAACAAGGAAATTTTTTTCCTCTCTATCAGGAATAGG
TCATCCCAATCCCCACCTACATTATATTTTTGTAAGAAAATA-------
>chr5D_572
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------AAGCAT
CGGTGGAAGCAGCCTGTTTTTCTTTTGCCGGTGCTGAACTTGCAATGCAACTTGACTTTGGGTTTCACCGT-TATGAAGC
TGTGGTTCCCTTGTTGCTCCAGCAAAATGCGATAATATAAGAAGAGAAGTTGTCCTCTTCACTTTGACATTTCACACCTA
GGCTTGCCAGCCCAGCAGCCCAAGAGCCTCCAAATTGGCCTCTCGCTTTCCGGCCCCATCTATAAATACCGCGGCGAGGC
CTTCCCACGCCCTCCACAATTCGAAAGATCCACCGAAGATTTTTCTCCTCACTCTCCTCGACCTCACAGCTCTCC-----
---------TCTGCCAGCAGCGCAGATTTACAGACACAAGCTAGCACACAGCAAGCTCAGAGCACCTCGCTGGTCTAAGT
GATCCTTCTCAAGGATCATTTGGATGGCCTTCTTCCTCCTCCTCCTGTGCATCCTCATTTCTGCGGCCATCGTGTCCTAC
GCCCACCACGTAATCCGGCGGCAGCGCC---------AGGGCTGCGCTCATGGTCATGGTCGCCATGAGCAAGCCGCCCT
CAAGCTGCCCCCTGGCTCCATGGGCCTGCCTTACATCGGCGAGACCCTCCAGCTCTACTCCCAGGACCCCAGCGTCTTCC
TCTCCTCCAAGCAGAAGCGGTACGGCGAGATCTTCAAGACGCACCTCCTCGGCTGCCCGTGCGTGATGCTGGCGAGCCCG
GAGGCGGCGCGGTTCGTGCTGGTGTCGCGGGCGCACCTCTTCAAGCCGACGTACCCGCGGAGCAAGGAGCGCCTCATCGG
CCCGTCGGCGCTCTTCTTCCACCAGGGCGACTACCACCTCCGCCTCCGCAGGCTCGTCCAGGGCCCGCTCGGCCCCGAGG
CCCTGCGCAAGCTCGTGCCGGACATCGAGGCCGCCGTGCGGGCCACCCTCGCGGCCTGGGCGGACGGCGACGCCGCCAGC
ACCTTCCACGCCATGAAGAGGGTAAGCTAGAGCAGCTAGCTCAGCCTCAGCTGCACGTGTAGTTGCTGTCCAGAACAGCT
GTGGTGTTGGAG---TATTAACCAGTGCATATTTTGTTTTCGTCAGCTCTCGTTCGACGTCGGCATCGTGACGATCTTCG
GCGGGCGGCTGGACGAGCGGCGGAAGGAGGAGCTCCGGCGGAACTACGCCGTCGTGGAGAAAGGCTACAACTCCTTCCCC
AACAGCTTCCCCGGGACGCTATACTACAAGGCGATCCAGGTAAGCAACCGACGAAAACCGTGCGCCTTCGTCACGTTCGT
CGTCGTGGTGTATACGTCTTTAATATCAGCAGCACAACAATATACACGAATGCCATGTGACGAAAACCGCGATTTCGCAT
GCAGGCGAGGCGGCGGCTGAACGGCGTGCTGAGCGACATCCTGCACGAGCGGCGGGAGCGTGGCGAGCCCGGCGACGACC
TGCTCGGCTGCCTCATGCGGTCGCGGGCCGGCGGC------GACGACGACGGCGACGAGGGCGCGCTGCTCACGGACGAG
CAGGTCGCCGACAACGTCATCGGCGTGCTGTTCGCGGCGCAGGACACGACGGCCAGCGTGCTCACCTGGATCGTCAAGTA
CCTCCACGACCGCCCGAAGCTGCTGGAGGCCGTCCGGGCGGAGCACGCGGCGATCCACGAGGCCAACGACGGCGGGAGGC
GGCCGTTGACATGGGCGCAGACGAGGAGCATGACGCTGACGCACAGGGTGCGTGCCATACACTTCAAGGCTTACAGTTAT
ATG-TTTTCTTGTGCCTTGTGGTTGCTGATTGATGTCGCCCGTCGTACGCGCGCGCAGGTGATTTTGGAGAGCCTGAGGA
TGGCGAGCATCATCTCCTTCACGTTCCGGGAGGCCGTGGCCGACGTGGAGTACAAAGGTACGT----ACGCACGCAACGC
CCGGGCCATCACGTGCACCGCAGCTAGCTAAGCTACGGTCGACGTGGCGCTACGTAGACGTGGCGTTACCGTGCATGGGA
TTTAATTTGGGACGGTGCGACGATG------------CGACGTGACCTAAAATTTTGCCTGGCGTGCAGGGTTTCTTATC
CCCAAGGGGTGGAAGGTGATGCCGCTCTTCAGGAACATCCATCACAGCCCGGACTACTTCCAGGATCCACAGAAGTTCGA
CCCTTCGAGATTCAAGGTACGTACGCGTCCCCCTCGCCGGAGTGCAACCTCGATGTGGATGCGTCTGGCCAAACTGAAAA
TCGTGACCTTCAAAAAAGGAGCAACTGAAAAATTGTTCCTTTCGATGCATTAAATCGTGCCCTTCATTGGTCAATCAATA
CGCTCCATTCATGAG------------TAG-----------CCTGGTGAATACGGTGTTAAATACC------ACTTGAAC
ACGGTTAAATCCTGACGATACATGCCCTATCTAGAATATTTGAATCCGCCTTTGTTT-CCCAGATTAGTAGAGCCAAC-T
TTTTACGGGGTCTCATTTTCTTGTGGTGGTAAAACATGCAGGTGGCGCCGCGGCCGAGCACCTTCACGCCGTTCGGGAGC
GGGGTGCACGCGTGCCCCGGGAACGAGCTGGCCAAGCTCGAGATGCTGGTGCTCATCCACCACCTGGTCACCGGCTACAG
GTGCGTGCCCCCCTCCCTCCGCCTCCACACAGATCCTCCATATATTCCCATTTGTGATTTGTCCCTGTGGACAAGAACGT
CCCA----TGGCTGGTGCAGTGGCGCCAATTCACCGGGCCACCCTTCACCTGGCGCCCAGTTCCACGGCACGCATACTCC
AACCATGCGCCGATCGTGTCACGTCATGTCATGAAAATCCGGGTGGTCCATTGCTGCCCGCCCTGCCTTGCACGTAGAGG
CGCCTGCCTATGAGCTGTGCTACCGCTGCTACCGCTGATCACTCGCTGCCATGGCGACAGCTGTGGTACTAAATC-----
--GATTTAGGTAGGAATGGGGGTGATGATTGATGTGTGTTGGTGCTTGGTTTTTGCAGGTGGGAGGTTGTTGGATCGAGC
GACGACGTCGAGTACAGCCCATTCCCTGTTCCCCGCCATGGCCTGCTCGCCAGGTTACGGCGAGATGACAGCGTCTGCGT
GGGTAGGAAGGGGTGCCCGACTGAGGACAACTACGACGACGACGACGAAGTGATAGTGTGATTAGTCAACGTAGATAGCT
AGAGGGCTCTTTTCTCCCTTTTTGTTGTTGTTGCTGT------------GGCATTCTTCTCTATGAAAATCATTAGAGGA
GAAACAACAGC-----ACGACTTTTTAGGATGACGATGATCATGTACCGTAGTGCTTATGTTGTCAATGATGTATTGTCA
TTGATAGGCACATAAAATGACGCTTCCTTTTTCCGGAATATTGCATTGAAACAATTCACNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTCTCTCTCTCTCTCT------------
-------------CCAACGGTCTCAGGGTGATCTATCGATTGGGAGGGAGGTAGTGAGTTGATGATGTGCGACACACGTT
ACCGAGTTGACTTCGTCTCCGATCTATGGGCGGCGAGCCTACTCGTTTTCCGGTTGGGTTTCCTTCTCCGGCGAGGATCC
ACGCGGAGGGTGGTGCTGCTCGACAACGAGGAGCGGTTCATCGAAAGCCGGGGAGCCGAGTGGAGGACCGATTCGAGAAG
G-AGGCCTGATATTTTCCCCTGTCACCTGACACGTATACGTGAGCATGTGGACCACAATGCACGGGAGGTGAAGTGGCTC
CCCATGAGTGCCCTGGAGGTGGGGCTGTGAGAGGGGGGGCATCCATTGACCACTTGCCTTTTGGCGAGCGCTCTCCTTTC
TCCATTCAGTTGCAGTGGAGAAAGGTGCAACCGAATCCAGTTCTGCCCATGGGGATGGACCGGAGCGCGGGTTGGAGGTG
TATGCAGGAGCATATGCAAGCAAGCTGGAGAAAGCGAATGAGGTCCTCTCCGGCTTCCCAAACGTGAAGGAGTTAATCAA
GGCGGTGATCATTGTGACTATGGATGCGAACAGGGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGCCGAGCTTTGTATTACTCCAAGGGCGGCGACCCTCATAACCCACCAAT
TGATGCGGATGTGGTGGCGTTGGCGATTCCGACATCACGTGCATAACAAGGCATATTTTTTCCTCTCTATCAGGAATAGG
TCATCCCTATCCCCACCTACATTATATTTTTGTAAGAAAATA-------
>SNPs
--------S-------------------------------S--------S---------------------SS-------
------------------------S-----S-------S---------------------------S-----------S-
--S--------------SS-------------SSS-S-------------------------------------------
--------------------------------------------------------------------------------
----------S--S----S-------------SS-------S--S-S----S----------------------------
-----------------------------S-----S-------------S-------------S--------------S-
S---SS-----------SS-------------S----------------------S----------------S-----S-
--------------------------------------------------------SS------S---------------
S--------------------------SSSS----------------S---S--------S------------S------
-----------S-------------------------------------------------S------------------
-------------------------------S------------------------------------------------
-SSS-------------------------------S--------------------------------------------
---------------------------------------------------------------------------SSSSS
SSSSSSSSS-----------------------------------------------------------------------
---------------------------------------------------------------S----------------
----------------------------SSSSSSSSS-----S------------S-------------S----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
---S----------------------------------------------------------------------------
------------------------------S----------S----S---------------------------------
--S------------------------------S-----------------------S-------S-----S-S-SS-S-
-SSSSSSSS-SSS-------------------------------------------------------------------
----------------------------------SS--------------------------------------------
---S----------------------------------------------------------------------------
-----------------------S-SS-S-------------S---S-----------S---S---S-------------
-S-------------------------------------------------------------S----------------
----------------------S-----S------SSSSSS----------SS--S------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S-S
---S---------------S--S---------------S-----------------------------------------
---------------------------------------------------------------SSSS-------------
---------------------------------------S----------------------------------------
-------SS-----------------------S----S------------------------------------------
--------------------------S-----------------------------------------------------
-----------------------------------------------------------------S----S---------
-------------------------S---------------------------------S------------S-------
-S-------------SSSSSSSSSSSS-----------------------S-----------------------------
----------------------------------------------------------------------S-S-----S-
----------S------------------------S--------------------------------------------
-----------------------------------------------------------------S--------------
--------------------------------------S------SS--S--------------S--S-----S------
----SSSS---------------------------------------S--------------------------------
----------------------------S-------S--------------S----------------------------
------------------------------S--S--------------------------------SSS-SS-SSSSSSS
SS--------------------------------S---------------------------------------------
--------------------------------------------S-----------------------------------
----------------------------S---------------------------------------------------
-----------------------------------S--------------------------------------------
-----------SSSSS--S-----------S-----------------S-------------------------------
--------------------------------SSS----------------S-S-S----S---S--------S------
----------------S---S-S-S-------------------------------------------------------
--------------------------------------------------------------------------------
-----------------S-------------------S--S---------------------------------------
S------------------S---S-----------S------------------S-------------------------
--S------------S------------------S---------S-----S-----------------------------
-S-----------------S--------SS--------S---S---S---------S-------S----S------S---
S-------------SS-S--------------------------------------------------------------
-S-----S---------S--------------------------SS-----S-------S------S-------------
-----------------------------------------------------S-----S--S---------S-SS----
--------------------------------------------------------------------------------
----------------------------------------S---------------------------------------
--------------------------------------------------------------------------------
---------------------------------S------S-----S--------SS---S------------S------
S----S-----S-------S-S----------S-----S---------------------S-----------S-------
------S-----------------------------------SSSSSSS
>forward_916
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------AGCCCAAGAGCCTCCAAATC--------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2946
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-----------------------------------------------------------------CGGCCGAACTGAAAA
TCGTG---------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1757
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---------------------------------------------------------CGTAGTTGTTGTCCGGGAGT---
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_3067
--------------------------------------------------------------------------------
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--------------------------ATAGCCTGGTGAACACGGTG----------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_1762
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--------------------------------------------------------------TTGTTGTCCGGGAGTGAT
GC------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_3634
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---------------------------------ACTGATCACTCGCTGCCATG---------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>forward_3549
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---------CCGATCGTGTCATGTCATGC---------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------------
>reverse_5154
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---------------------------------TGGGCTTCGTATTGCTCCAA---------------------------
--------------------------------------------------------------------------------
-------------------------------------------------
