>input_sequence_29307
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--------------------------------------------------------------------------CTGAGA
TGCGATTGTTCCCCCACTGTTT-----CTTATCTGCAACTGTATCATTCTTGCAGCCTCCCAACA---G----CGATCCA
TGGAGTCGTGCCAATTAGTACGGGAGAGCTC---TAGTAGCGGTAGGGTGGAGG---CGGAGGAGGAAACCTTCTTCGAC
ACGCGCCAGGACCTCCTGGCCTCG------------CCGGCACCGGCATTGCCGTGGTCGTCCGGCGGCCTCGA------
---CAGCGTGAGGGACAGGAAGGAGCGCTTCTTCAGAAGCATGGGCCTCGAGTGCGGCCCGAGCCCCAGGCGGGC---GG
---ATCCCGTGTGTGCCGCCGGCGAAGTGGAGAAGCAGCAGGAGGAGGAGGCTGTGCCGGAGACTGGGAGGCTGTCGTCG
CACTCGGAGGACAACGACTGCTCCATGTCCAGTTGGTCCACGGAGGAGACCACGAGCTATGACGAGGGCGGCGCGTCGGA
CGACAATTCCGTCGGTGGATCCAGCAAGGATGATGGCAGCAGCAAGGTCAGCAGGAGCTCCAGTTCATTTTCCTTCATCC
GGAGGCTTATGAGCCGAAATGGCAAGCCTTCTGGTGCTCCGAGGACAGTTGAGATGAGGAGAAGCGGATGGCTGGAGAGG
CTGGGCGTGGCCGTTTGTGCTGTGGATAATGCGGCGGATGAGCCTAGCACCAGCTCCTCTGACAGCGAGCAGATTCATGG
TGGAAGGTATGAGAGAGTCAAGGTCCGATCGTACCGGAAGCGGTCCAAGGAATTGTCTGCGCTCTACCAAGGCCAAGTGA
TCAAGGGACACGATGGTGCCATCCTCACGATGAAGTTCAGTCCTGATGGGCAGTTCCTCGCAACCGGCGGCGAAGATGGA
GTTGTCCGGGTTTGGGGTGTTTCGCAGTCTGATGACTGCAAAATTCCTCTGGATGACCCCTCTTGCGTCTACCTCAAAGC
CCGGCGCAAGAATGGGTTGGCGCCGGTGAGCGTTGACAGCGAGAAGCTGCGCAAATCCAAGAGTATGGGCATGAAGAAGA
CTGGAGACTCTGCCTGCATTGTGATTCCAACAACGGTTTTCCAAATTTCAGAGGAACCATTGCATGAGTTCTATGGGCAC
TCTGCTGATGTATTGGATCTGTCCTGGTCAAACAACAAGGTCAGTTGAAGAAGTGTATTTTTTTTTATCAATCTAATGGG
ATTGTT-TTTGTTTCTCCTGTATATACCTTTTTACTGATGATGATTAAAATTTGATACCTTGCAGCATCTATTGTCGGCT
TCGACAGACAAAACTGTCCGCCTGTGGGAAATTGGATCTGCAAACTGCATCAGAGTTTTCCCGCATAGCAACTTTGGTAG
GCTTATGAATTCATATTTTCTCTGCTTCCCTATAAATTTATTTATGGATTGAAGCTGACAGTTTGCTCTCCATG-TTCTG
CAGTGACTTGTGTCCATTTTAATCCGGCAGACGACAATTGCTTCATGACTGGATCAATTGACGGCAAAGTTCGTGTATGG
GACATAACTAGATGCAGCGTTGTGGACTGGGCAGATGTTAGAGACATAGTTACAGCGGTCTGTTACCGACCTGATGGAAA
GGTACGTTTTTAGCGCACCATTGTAGTTATTTTGATAAATTTGGTACCTTGATAGTTGGGAGACTGATCTCCAATTTTCC
TTCGCCTTTCTGCAGGGTGCAGTGGTTGGAACGATCACTGGAAATTGTCGGTTTTATGACGCATCGGACAACCTGCTGCG
GTTGGAAACTCAGATTGCACTCAGCGGCAAGAAATCGTCTTTGAAGAGAATCACAAGTTTTCAGGTAATCATCTACTTAC
AAGAAAAGGATGACTGTTGTTGCAATTGATATCTTCATCAGCCCTTT--TTCATCAAGCATGTTACTTACTATTGCTCTT
CCATTTCCATGGCAGTTCTGTCCAAACAACCCAAGTAAACTAATGGTAACATCTGCTGACTCCAAGATCAGAATGTTGGA
TGGAACCAATGTGATTCAGAATTACAGTGGTACGTCTCAAATACTTATTCTATTCCTTTTGCTATATTCAACATTTACCT
CTATAGTTGCTCTCTCTAAAATCATAACTTTCAATGGACTAATA---TTTCTAAACCATCATCAGGACTCCGAAGTGGTT
CATGCCAGATGTCAGCATCCTTCACACCAGACGGGGAGCACATAGTTTCTGCAAGTGAAGACTCCAACATTTATGTCTGG
AACCGTGACAACCAAGATGAATCTGTATGGCGACAAGCAAAAACCACATACTCCTCTGAGCGCTTCCTATCCAACAACGC
AGCCATCGCGATACCATGGCACGGCACAAAACCAAGAGGCCATGTTTCCCTGGCCTCTCATATCCAGTTCAAGTACAGTT
CCAGCAAAAGTTTTCCTTCAAGATCCTCTGCTCCTGGCATTTTCAACCTCAACCAGGAGTTGTTCGCTGAGCCCTCGTGC
AAAGGCGCCTCAGCAACTTGGCCGGAGGAAATGCTGCCGTCCGGCTCGATCGGCGCAAGCCTGGACGAGTCGCAGCACAA
GCTTCTGAGGAACTGTTCCCAGAGCACGGCGAACTCCTGGGGCCGGGTGATCGTAACCGCGGGATGGGACGGCAGGATCA
GGTCGTTCCAGAATTACGGCCTGCCGGTGCATCAGTGACTGGTTCATCCGGAGCGCTCGGTGAAAGCAAGTAAACGGCAG
CATTGGCG------------------------------------------------------------------------
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----------------------------------------------------------------------------
>chr2B_1_TraesCS2B01G420100
AGAAGTATAAAGAATGGTACTACCAG--TACTGCTCAAG----TTTTTATTCTTG------TGCTGAAGATTCCTGTCTC
TCGTCTTGGCGCGGTGGGGGG-TTACCGGGATTAACAAAACTCTAT-------TTTTTTTTAAAAAAAAACCTCCA----
-TTTCTTTTTGGCGTGCTGGTTCCAAATCTGGCGATGGTGATGGGGACGGAGGCCAGGCCGGGGCCGGGACCCCATCCCC
CT----------CCTTCCACGTCCTAATAAATCGCTCCCATCTCCGATTCGCTCACCCC----CTTTTCTCCCTTCGATC
TTTCCGCCTTCCCGTCG---ATTCCATTCCGTTCCAATCCATCG-TCCCCATTTGCTCCATGCTGCCGGCGCCGCCGCTG
CTCCCGCGCCCGGCGACCACCACCACCCAAGAACACGCGCGTCGCCGCTGCTGACAGACAGGGCCGACACCTCCCTCCCT
CCGTCCCTCGGGCCCCAATTCC---------CGAGCGAGCGAGCGCGCGCGCCAGTTCCGCCTTCCC-TT----------
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--------------------------------------------------------------------CGGCCCAGGTGC
GCTTCCCCTCCCGCGAGTTT-----TTCTATTCCCCTCA--CCGCGTCGGCAAATCCCTTCGAGATATGTGTCGCCGAAT
TCGTTTCACCGCCCGTTCCTTCATCAAGAGGA-AAAAAATGTTCTTTTCTTCTGGTTCGTTGGCGCAGC-----------
-GCCTGGCTCTCCGCTTTAACAATGGGCGCGCGCGAGCG------------GCTGGCTGTTCGTTAACTTGGCGTCGCCG
CGGCCAGATGCAT----TGCCCGGGGCCGATTCGGCCACGCGAGGCCCGGGATTTCATGGCAGATACGCGGCAATTGATT
AGTTCCGATTTGGTGCTCTAATTTCTTTCTTTATTAACTCTTGATTAATCACGCCTGTTTTTTTTTTTTTAAATTCTCCT
CTCCTCTCG-------------CGTCCGTCCGCGCTCGCTTTCTCGTCCCCAAGTTACCGCCGACGCAATTCAGCGCTG-
------------CCCTGCCGCTTTACTTCCTTCCCCCCTCCACTGTTATATAAGCGCGCGCCCGCACGGC-GCTCTGAGA
TGCGATTGTTCCCCCACTGTTT-----CTTATCTGCAACTGTATCATTCTTGCAGCCTCCCAACA---G----CGATCCA
TGGAGTCGTGCCAATTAGTACGGGAGAGCTC---TAGTAGCGGTAGGGTGGAGG---CGGAGGAGGAAACCTTCTTCGAC
ACGCGCCAGGACCTCCTGGCCTCG------------CCGGCACCGGCATTGCCGTGGTCGTCCGGCGGCCTCGA------
---CAGCGTGAGGGACAGGAAGGAGCGCTTCTTCAGAAGCATGGGCCTCGAGTGCGGCCCGAGCCCCAGGCGGGC---GG
---ATCCCGTGTGTGCCGCCGGCGAAGTGGAGAAGCAGCAGGAGGAGGAGGCTGTGCCGGAGACTGGGAGGCTGTCGTCG
CACTCGGAGGACAACGACTGCTCCATGTCCAGTTGGTCCACGGAGGAGACCACGAGCTATGACGAGGGCGGCGCGTCGGA
CGACAATTCCGTCGGTGGATCCAGCAAGGATGATGGCAGCAGCAAGGTCAGCAGGAGCTCCAGTTCATTTTCCTTCATCC
GGAGGCTTATGAGCCGAAATGGCAAGCCTTCTGGTGCTCCGAGGACAGTTGAGATGAGGAGAAGCGGATGGCTGGAGAGG
CTGGGCGTGGCCGTTTGTGCTGTGGATAATGCGGCGGATGAGCCTAGCACCAGCTCCTCTGACAGCGAGCAGATTCATGG
TGGAAGGTATGAGAGAGTCAAGGTCCGATCGTACCGGAAGCGGTCCAAGGAATTGTCTGCGCTCTACCAAGGCCAAGTGA
TCAAGGGACACGATGGTGCCATCCTCACGATGAAGTTCAGTCCTGATGGGCAGTTCCTCGCAACCGGCGGCGAAGATGGA
GTTGTCCGGGTTTGGGGTGTTTCGCAGTCTGATGACTGCAAAATTCCTCTGGATGACCCCTCTTGCGTCTACCTCAAAGC
CCGGCGCAAGAATGGGTTGGCGCCGGTGAGCGTTGACAGCGAGAAGCTGCGCAAATCCAAGAGTATGGGCATGAAGAAGA
CTGGAGACTCTGCCTGCATTGTGATTCCAACAACGGTTTTCCAAATTTCAGAGGAACCATTGCATGAGTTCTATGGGCAC
TCTGCTGATGTATTGGATCTGTCCTGGTCAAACAACAAGGTCAGTTGAAGAAGTGTATTTTTTTTTATCAATCTAATGGG
ATTGTT-TTTGTTTCTCCTGTATATACCTTTTTACTGATGATGATTAAAATTTGATACCTTGCAGCATCTATTGTCGGCT
TCGACAGACAAAACTGTCCGCCTGTGGGAAATTGGATCTGCAAACTGCATCAGAGTTTTCCCGCATAGCAACTTTGGTAG
GCTTATGAATTCATATTTTCTCTGCTTCCCTATAAATTTATTTATGGATTGAAGCTGACAGTTTGCTCTCCATG-TTCTG
CAGTGACTTGTGTCCATTTTAATCCGGCAGACGACAATTGCTTCATGACTGGATCAATTGACGGCAAAGTTCGTGTATGG
GACATAACTAGATGCAGCGTTGTGGACTGGGCAGATGTTAGAGACATAGTTACAGCGGTCTGTTACCGACCTGATGGAAA
GGTACGTTTTTAGCGCACCATTGTAGTTATTTTGATAAATTTGGTACCTTGATAGTTGGGAGACTGATCTCCAATTTTCC
TTCGCCTTTCTGCAGGGTGCAGTGGTTGGAACGATCACTGGAAATTGTCGGTTTTATGACGCATCGGACAACCTGCTGCG
GTTGGAAACTCAGATTGCACTCAGCGGCAAGAAATCGTCTTTGAAGAGAATCACAAGTTTTCAGGTAATCATCTACTTAC
AAGAAAAGGATGACTGTTGTTGCAATTGATATCTTCATCAGCCCTTT--TTCATCAAGCATGTTACTTACTATTGCTCTT
CCATTTCCATGGCAGTTCTGTCCAAACAACCCAAGTAAACTAATGGTAACATCTGCTGACTCCAAGATCAGAATGTTGGA
TGGAACCAATGTGATTCAGAATTACAGTGGTACGTCTCAAATACTTATTCTATTCCTTTTGCTATATTCAACATTTACCT
CTATAGTTGCTCTCTCTAAAATCATAACTTTCAATGGACTAATA---TTTCTAAACCATCATCAGGACTCCGAAGTGGTT
CATGCCAGATGTCAGCATCCTTCACACCAGACGGGGAGCACATAGTTTCTGCAAGTGAAGACTCCAACATTTATGTCTGG
AACCGTGACAACCAAGATGAATCTGTATGGCGACAAGCAAAAACCACATACTCCTCTGAGCGCTTCCTATCCAACAACGC
AGCCATCGCGATACCATGGCACGGCACAAAACCAAGAGGCCATGTTTCCCTGGCCTCTCATATCCAGTTCAAGTACAGTT
CCAGCAAAAGTTTTCCTTCAAGATCCTCTGCTCCTGGCATTTTCAACCTCAACCAGGAGTTGTTCGCTGAGCCCTCGTGC
AAAGGCGCCTCAGCAACTTGGCCGGAGGAAATGCTGCCGTCCGGCTCGATCGGCGCAAGCCTGGACGAGTCGCAGCACAA
GCTTCTGAGGAACTGTTCCCAGAGCACGGCGAACTCCTGGGGCCGGGTGATCGTAACCGCGGGATGGGACGGCAGGATCA
GGTCGTTCCAGAATTACGGCCTGCCGGTGCATCAGTGACTGGTTCATCCGGAGCGCTCGGTGAAAGCAAGTAAACGGCAG
CATTGGCGCCTCTCACATGGCCGGCCATCAA-GAAAAGCGCCGGTGCACCCCAGCTATGGCGCTGGACCAGTGC--GTGT
GCGGTTTCTTGGTACAAGACATCACATGCTCGGCGCTC---CTGCTGCTGAATCGTGCATGGACCAGTGCTTGTACATAA
TCAACCCGGTGGTCCTCCGAGATCTCTTCATCATCAGCGGTTGTTGTTCGTGGCAGGCCCTGTAGCTATTAGCTCGC---
-TAGCTTTGTACCACTCC--CTTTTTTGTAGAGAGATCTTTCAGTCTAGATCAGATTTATTCTTTGCCCTT---------
---TTTCTTTCTTTCGATTGCTCTATTGATTTGATGATATGCCGCGGAAATGTTAGTGTAAGTTGAGTGTAAATTCTCCT
CCCTCCCACTGAATGTGTGGGAAGGAGCCTGATGGAACTGGTAGGATACATGTGTTCCATCCATCCGAGTATATGAAAAA
TTCGTTCATTCCTTCAAAATTCAGTGTCCAGTTCTCTTCAACGTATGTAGCACGCTTGTACC----CAGTTTCAGATGTG
GTTAAGCTTGTGGTTCTGGCTATAAGCTGTTTGGTGTGGGCCTTGTGCGGATGCTGAAAAGGTAATTATTGTCCCTCTAA
TGGGGCCTTTTGGTGGTTGATCCCTTGATTGATTGATTGATCCCCCCATGTTACTTGTTCGTCCCATAAATATACTGGTC
CTGAATTGATCTGTTGAGGCCGGACCGACCTGGCGAACGTGCATCTCATCTTCTTGAGTAGTATCTTCTGCTATGCCCTG
TGTTTTTCTTTGCAAACATCTGCAAAGAGCACTGCTATGCAGACGATGTTTTGAAGACGATTTGTGTACGACAACTAAAT
CAAGCCGTCCATGCATATGACTAAAGTGGGGCCAACGGATGGATTAGCCATCGTTTCCTTGTCGTGCAGGCTGTGCGTCG
TCCGCACAGCAGTTTCGATCTGCAAATGTGGTAGAGTGGGTATTATCCTCCTGCTGCACCCTTGGAACTTGCATTA
>chr2A_4
---AGTATAAAAAATGGTGGTACCAG--TACTACTGCCTCAGCCTTTTATTCTCCTGCTGATGCTGAAGATTCCTGGCTC
TCGTCTTGGCGCAGTGGGGGGGTTACCGGGGTTAACGAAACTCTATAAATAATTTTTTTTTTAAAAAAATCCTCCGTTTC
GTTTCTTTTTGGAGTGCTGGTTCCAAATCTGGCGATGGTGATGGGGACGGAGGCCAGGCCGGGGCCGGGGCCCCCG----
------------CCCTCCACGTCCTAATAAATCGCTCCCATCGCCGATTCGCCCACCCCCTTTCCTTTCTCCCTTCAATC
TTTCCGCCTTCCCGTCGTCGATTCCATTCCGTTCCAATCCTCCG-TCCCCATTTGCGCCATGCTGCCGGCGCCGCCGCCG
CTCCCGCGCCCGGCGAC---CACCACCACCGCCCAA--------------------------------------------
----------------------------------------GAGCGCGCGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGGCCCAGGTGC
GCTTCCCCTCCCGCGAGTTTCGTTTTTCTATTCCCCTCCCCCCGCGTCGGCAAGTCCTTTCGAGATATGTGTCGCCCAAT
TCGCTTCACCGCCCGTTCCTCCAACGAGAGGAGAAAAAAAGTTCTTTTCTTCCGGTTCGTTGCCG---------------
---------CTCCGCTTTAACAATGGGCGCGCGCGGGCGAGCGGCTGGCTGGCTGGCTGTTGC-TAACTTGGCGTCGCCG
CGGCCAGATGCATGCATTGCTCGGGGCCGATTCGGCCACGCGAGGCCCGGGATTTCATGGCAGATACGGGGCCATTGATT
AGTTCCGATTTGGTGCTCTAA----TTTCTTTATTAACTCTTGATTAATCACGCCTGTTTCAAAAAAAAAAAAAT----T
CTCCTCTCG-------------CGTCCGTCCGCGCTCGCTTTCTCGTCCCCAAGTTGCCGCCGAGGCAATTCAGCGCGCC
CCCGGCCGCTGCCCCTGCCGCTCTACT--------CCCTCTACTGTTATATAAGCGCGTGCCCGCACGGCTGCTCTGAGA
TGTGATTGTTTGTTCCCCACACTGTAGCTTATCTGCAACTGTATCATTCTTGCAGCCTCCCAACAACAGCGATCGATCCA
TGGAGTCGTGCCAGTTAGCGCGGGAGAGCTC---TAGTAGCGGTAGGGTGGAGG---CGGAGGAGGAGGCCTTCTTCGAC
ACGCGCCAGGACCTGCTGCCGTCGCCGGCGCCCAGCCCGGCACCGGCATTGCCGTGGTCGTCCGGCGGCCTCGATGGCCT
CGACAGCGTGCGGGACAGGAAGGAGCGCTTCTTCAGAAGCATGGGCCTCGAGTGCGGCCCGAGCCCCAGGCAGGC---GG
TGGATCCCGCTTGCGCCGCCGGCGAGGTGGAGAAGCAGC---AGGAGGAGGCTGTGCCGGAGACCGGGAGGCTGTCGTCG
CACTCGGAGGACAACGACTGCTCCATGTCCAGTTGGTCCACGGAGGAGACCACGAGCTATGACGAGGGCGGCGCGTCCGA
CGACAATTCCGTCGGTGGATCCAGCAAGGACGATGGCAGCAGCAAGGTCAGCCGGAGCTCCAGTTCGTTCTCGTTTATCA
GAAGGCTTATGAGCCGAAATGGCAAGCCTTCCGGCGCTCCGAGGACAGTTGAGAGGAGGAGAAGCGGATGGCTGGAGAGG
CTGGGCGTGGCCGTTTGTGCGGTGGATAATGCGGCGGATGAGCCTAGCACCAGCTCCTCTGACAGCGAGCAGATTCATGG
TGGAAGGTATGAGAGGGTCAAGGTCCGATCGTACCGGAAGCGGTCCAAGGAATTGTCTGCCCTGTACCAAGGCCAAGTGA
TCAAGGGACATGATGGTGCCATCCTGACGATGAAATTCAGTCCTGATGGGCAGTTCCTAGCAAGCGGCGGCGAAGACGGA
GTTGTCCGGGTTTGGGGTGTTTTGCAGTCTGATGACTGCAAAATTCCTCTGGATGACCCCTCTTGCGTCTACCTCAAGGC
GCGGCGCAAGAACGGGTTGGCGCCGGTGAGTGTCGACAGCGAGAAGCTGCGCAAATCCAAGAGTATGGGCATGAAGAAGA
CTGGAGACTCTGCCTGCATTGTGATTCCAACAATGGTTTTCCAAATTTCAGAGGAACCATTGCATGAGTTCTATGGGCAT
TCTGCTGATGTATTGGATCTGTCCTGGTCA---AACAAGGTCAGTTGAAGAAGTGTATTTTTTTT-ATCAACCTAATGGG
ATTGTTCTTTGTTTCTCCTATATATACCTCTTTACTGATGATGATTAAAATTTGATACCTTGCAGCATCTATTATCGGCT
TCAACAGACAAAACTGTCCGCCTGTGGGAAATTGGATCTGCAAACTGCATCAGAGTTTTCCCGCATAGCAACTTTGGTAG
GCTTGCAAATTCATATTTTCTCTGCTTGCCTATACCTTTACTCATGGGTTGAAGCTGACAGCTTGCTCTCCAAATTTTTG
CAGTGACTTGTGTCCAATTTAATCCGACAGACGACAATTGCTTCATCACTGGATCCATTGACGGCAAAGTTCGTGTATGG
AACATAACTAGATGCAGCGTTGTCGACTGGGCAGATGTTAGAGACATAGTTACAGCGGTCTGTTACCGACCTGATGGAAA
GGTACGTTTTTAGTGCACCATTGTAGTTATTTTGATAAATTTGGTACCTCGATAGTTTGGAGACTGATCTCCAATTTTCC
TTCGGCTTTCTGCAGGGTGTAGTGGTTGGAACGATTACTGGAAATTGTCGCTTTTACGACGCATCGGACGGCCTGCTGCG
GTTGGAAAATCAGATTGCACTCAGCGGCAAGAAATCCTCTTTGAAGAGAATCACAAGTTTTCAGGTAATCATCTACTTAC
AAGAAAAGGATGACTGTTGTTGTAATTGATATCTTCATCAGCCCTATTATTCATCAAGCATGTTTCTTACTATTGCTCTT
CCATTTCCATGGCAGTTCTGTCCAAACAACCCAAGTAAACTAATGGTAACATCTGCCGACTCCAAGATCAGGATGTTGGA
TGGAACCAATGTGATTCAGAATTACAGTGGTACGTCTCAAATACTTACTCTATTCCTTTTGCTATATTCAACATTTACCT
CTATAGTTTTTCTCTCTGAAATCATAACTTTCAATGGACTAATAATATTTGTAAACCATCATCAGGACTCCGAAGTGGTT
CATGCCAGATGTCAGCATCCTTCACACCAGACGGGGAGCACATAGTTTCTGCCAGTGAAGACTCCAACATTTATGTCTGG
AACCGTGACAACCAAGATGATTCTGTGTGGCGACAAGCGAAAACCACATATTCCTCTGAGCGCTTCCTATCCAACAACGC
AGCCATCGCGATACCATGGCACGGCACAAAACCAAGGAGCCATGTTTCCTTGGCCTCTCATATCCAATTCAAGTACAGTT
CCAGCAAAAGTTTTCCTTCAAGACCCTCTGCTCCTGGCATTTTCAACCTCAACCAGGAGTTGTTCGCCGAGCCGTCGTGC
AAAGGCGCCTCGGCAACTTGGCCGGAGGAAATGCTGCCGTCCGGCTCGATCGGCGCAAGCCTGGACGAGACGCAGCACAA
GCTTCTGAGGAACTGCTCCCAGAGCACGGCGAACTCCTGGGGCCGGGTGATCGTCACCGCGGGATGGGACGGCCGGATCA
GGTCGTTCCAGAATTACGGCCTGCCGGTGCAACGGTGACTGGTTCATCCGGAGCGCCCGGTGAAAGCAAGTGAACGGCAG
CATTGGCGCCTCCCACATGGCCGGCCATGAA-GAAAAGCGCCCGTGCACCCCAGCTATGGCGCTGGACCAGCGCGTGTGT
GCGGTTTCTTGGTACAAGACATCACATGCTCGGTGCTC---CTGCTGCTGAATCGTGCATGGACCAGTGCTTGTACATAA
TCAACCCGGTGGTCCTCCGAGATCTCTTCATCATCAGCGGTTGTTGTTCGTGGCAGGCCCTGTAGCTATTAGCTCGCTCG
CTAGCTTTGTACCACCCC--TTTTTTTGTAGAGAGATCTTTCAGCCTAGATCAGATTCGTCCTTTGCCCTTTTTCTTTCT
TTCTTTCTTTCTTTCGATTGCTCTATTGATTTGATGATATGCCGCGGAAATGTTAGCGTAAGTTGAGTGTAAATTCTCCT
CA-TCCCGCTGATTGTGTGGGAGGGGGACTGATGGAACTGTC-GGATACATATGTTCCATCCATCCGAGTATACGGAAAA
TTCGTTCATTCGTTCAAAATTCAGTGTCCACTTCTCTTCAACTTAGCCTTGTATGCTCGTACTATTCAGTTTCAGATGTG
ATT-AGCTTGTGGTTCTGGCTGTAAGCTGTTTGGTGTGGACCTTGTGCGGGTGCTGAAAAGGTAATTATTGTCCCTGTAA
TGGGACCTTTTGGTGGTTGATCCCTTGATTGATTGATCGATCCCCCCATGTTACTTGCTCGTCCCATAAATATGCTGGTC
CTGAATCTGTTG---GAGGCCGGACCGACCTGCCGAATGTGCATCTCGTCTCCTTGATAGTATCTG-CTGCTACGCCCTG
TGTTTTCCTTTGCAAACATCTGCAAA------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>chr2D_5
----GTATAAAAAATGATATACTAGTACTACTGCTCAAA----CTTTTATTCTCC------TGGTGAAGATTCCTGGCTC
TCGTCTTGGCGCAGTGGGGGG-TTACCGGGATTAATAAAACTCTCTATAAAA------TTTTAAAAAAATCCTCCG----
-TTTCTTTTTGGCGTGCTGGTTCCAAATCTGGCGATGGTGATGGGGACGGAGGCCAGGCCGGGGCCGGGACCCCATGCCC
AGCCCCCTCCCTCCCTCCACGTCCTAATAAATCGCTCCCATCTCCGATTCGCCCA-CCC----CCTTTCTCCCTTCGATC
TTTCCGCCTTCCCGTCG---ATTCCATTCCGTTCCAATCCTCCATTCCCCATTTGCGCCATGCTGCCGGCGCCGCCGCCG
CTCCCGCGCCCGGCGAC---CACCACCCAAGAACACGCGCCTCGCCGCTGCTGACAGGC----CCGACACCCTCCTCCGT
CCCTCCCTCGGAACCCCAATTCCCGAGCGAGCGAGCGAGCGAGCGCGCGCGCCGGTCCTGCCCTCCCCTT----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGGCCCAGGTGC
GCTTCCCCTCCCGCGAGTTT-----TTCTATT---------CCCCGTCGGCAAATCCTTTCGAGATATGTGTCGCCCAAT
TCGCTTCACCACCCGTTCCTTCAACGAGAGGGAAAAAAAAGTTCTTTTCTTA--GTTCGTTGGCGCAGCGCCTCCCTCCT
CGCCTGGCTCTCCGCTTTAACAATGGGCGCGCGCGGGCGGGCGAGC----GGCTGGCTGTTCGTTAACTTGGCGTCGCCG
CGGCCAGATGCATGCATTGCTCGGGGCCGATTCCGCCACGCGAGGCCCGGGATTTCATGGCAGATACGGGGCAATTGATT
AGTTCCGATTTGGTGCTCTAATTTCTTTCTTTATTAACTCTTGATTAATCACGCCTGTTTTTTAAAT----AATTCTCCT
CTCCTCTCCCCTCGCGTCCGTCCGTCCGTCCGCGCTCTCTTTCTCGTCCGCAAGTTGCCGCCGAGGCAATTCAGCGCTG-
------------CCCTGCCGCTTTACTTCCTTCCCCCGTCCACTGTTATATAAGCGCGCGCCCGCACGGC-GCTCTGAGA
TGCGATTGTTTCCCCACTGTTT-----CTTATCTGCAACTGTATCATTCTTGCAGCCTCCCAACA---GCGATCGATCCA
TGGAGTCGTGCCAATTAGTGCGGGAGAGCACTAGTAGTAGCGGTAGGCTGGAGGAGGCGGAGGAGGAGGCCTTCTTCGAC
ACGCGCCAGGACCTGCTGGCCTCGCCGGCGCCCAGCCCGGCACCGGCATTGCCGTGGTCGTCCGGCGGCCTCGATGGCCT
CGACAGCGTGCGGGACAGGAAGGAGCGCTTCTTCAGAAGCATGGGCCTCGAGTGCGGCCCGAGCCCCAGGCAGGCAGTGG
---ATCCCGTGTTTGCCGCCGGCGAGGCGGAGAAGCAGCAGGAGGAGGAGGCTGTGCCGGAGACTGGGAGGCTCTCGTCG
CACTCGGAG---AACGACTGCTCCATGTCCAGTTGGTCCACGGAGGAGACCACGAGCTACGACGAGGGCGGCGCGTCGGA
CGACAATTCCGTCGGTGGATCCAGCAAGGACGATGGCAGCAGCAAGGTCAGCAGGAGCTCCAGTTCGTTCTCGTTTATCC
GGCGGCTTATGAGCCGAAATGGCAAGCCTTCCGGCGCTCCGAAGACGGTTGAGATGAGGAGAAGCGGGTGGCTGGAGAGG
CTCGGCGTGGCCGTTTGTGCTGTGGATAATGCGGCGGATGAACCTAGCACCAGCTCCTCTGACAGCGAGCCGATTCATGG
TGGAAGGTATGAGAGAGTCAAGGTCCGATCGTACCGGAAGCGGTCCAAGGAATTGTCTGCGCTCTACCAAGGCCAAGTGA
TCAAGGGACACGATGGTGCCATCCTTACGATGAAGTTCAGTCCTGATGGGCAGTTCCTCGCAACCGGCGGCGAAGACGGA
GTCGTCCGGGTTTGGGGTGTTTCACAGTCTGATGACTGCAAAATTCCTCTGGATGACCCCTCTTGCGTCTACCTCAAAGC
GCGGCGCAAGAATGGGTTGGCGCCGGTGAGCGTCGACAGCGAGAAGCTGCGCAAATCCAAGAGTATGGGCATGAAGAAGA
CTGGAGACTCTACCTGCATTGTGATTCCAACAATGGTTTTCCAAATTTCAGAGGAACCGTTGCACGAGTTCTATGGGCAT
TCTGCTGATGTATTGGATCTGTCCTGGTCAAACAACAAGGTCAGTTGAAGAAATGTG--TTTTTT-ATCAACCTAATGGG
ATTGTTCTTTGTTTCTCTTATATATACCTGTTTATTGATGATGGTTAAAATTTGATACCTTGCAGCATCTGTTGTCGGCT
TCGACAGACAAAACTGTCCGCCTGTGGGAAATTGGATCTGCAAACTGCATCAAAGTTTTCCCGCATAGCAACTTTGGTAG
GCTTGCAAATTCATATTTTCTCTGCTTGCCTATACCTTTGCTCATGGGTTGAAGCTGACAGTTTGCTCTCCATATTTTTT
CAGTGACTTGTGTCCAATTTAATCCGACGAACGACAATTGCTTCATCACTGGATCGATTGACGGCAAAGTTCGTGTATGG
GACATAACTAGATGCAGCGTTGTGGACTGGGCAGATGTTAGGGACATAGTTACAGCGGTCTGTTACCGACCTGATGGAAA
GGTACGTTTTTAGTGCACCATTGTAGTTATTTTGATTAATTTGGTACCTCGATAGTTTGGAGACTGATCTCCAATTTTCC
TTCGGCTTTCTGCAGGGTGCAGTGGTTGGAACGATTACTGGAAATTGTCGGTTTTATGACGCATCGGACAACCTGCTGCG
GTTGGAAACTCAGATTGCACTCAGTGGCAAGAAATCCTCTTTGAAGAGAATCACAAATTTTCAGGTAATCATCTACTTAC
AAGAAAAGGATGACTGTTGTTGCAACTGATATCTTCATCAGCCCTTT--TTCATCAAGCATGTTTCTTACTATTGCTCTT
CCATTTCCATGGCAGTTCTGTCCAAACAACCCAAGTAAACTAATGGTAACATCTGCTGACTCCAAGATCAGAATGCTTGA
CGGAACCAATGTGATTCAGAATTACAGTGGTACGTCTCAAATACTTATTCTATTCCTTTTGCTATATTCAACATTTACCT
CTATAGTTTTTCTCTCTAAAATCATAACTTTCAATGGACTAATAATATTTCTAAACCATCATCAGGGCTCCGAAGTGGTT
CATGCCAGATGTCAGCATCCTTCACACCAGACGGGGAGCACATAGTTTCTGCCAGTGAAGACTCCAACATTTATGTCTGG
AACCGTGACAACCAAGATGATTCTGTGTGGCGACAAGCGAAAACCACATATTCCTCTGAGCGCTTCCTATCCAACAACGC
AGCCATCGCGATACCATGGCACGGCACAAAACCAAGGAGCCATGTTTCCTTGGCCTCTCATATCCAATTCAAGTACAGCT
CCAGCAAAAGTTTTCCTTCAAGACCCTCTGCCCCTGGCATTTTCAACCTCAACCAGGAGTTGTTCGCGGAGCCCTCGTGC
AAAGGCGCCTCGGCAACTTGGCCAGAGGAAATGCTGCCGTCTGGCTCGATCGGCGCAAGCCTGGACGAGACGCAGCACAA
GCTTCTGAGGAACTGCTCCCAGAGCACGGCGAACTCCTGGGGCCGGGTGATCGTCACGGCGGGGTGGGACGGCAGGATCA
GGTCGTTCCAGAATTACGGCCTGCCGGTGCATCAGTGACCGGTTCATCCGGAGCGCCCGGTGAAAGCAAGTGAACGGCAG
CATTGGCGCGTCTCACATGGCCGGCCATCAAGGAAAAGCGCCCGTGCACCCCAGCTATGGCGCTGGACCATCGCGTGTGT
GCGGTTTCTTGGTACAAGACATCACATGCTCGGCGCTCCTGCTGCTGCTGAATCGCGCATGGACCAGTGCTTGTACATAA
TCAACCCGGTGGTCCTCCGAGATCTCTTCATCATCAGCGGTTGTTGTTCGTGGCAG-CCCTGTAGCTATTAGCTCGCTAG
CTAGCTTTGTACCACCCCTTTTTTTTTGTAGAGAGATCTTTCAGTCTAGATCAGATTTGTTCTTTGCCCCTTTT------
-TCTTTCTTTCTTTCGATTGCTCTATTGATTTGACGATATGACGCGGAAATGTTAGTGGAAGTTGAGTGTAAATTCTCCT
CCCTCCCGCTGAATGTGTGGGAGGGAGACTGATGGAACTGT--------------------CATCCGAGTATACGGAAAA
TTTGTTCATTCGTTCAAAATTCAGTGTCCAGTTCTCTTCAACATATGCTTGTATGCTTGTACTATTCAGTTTCAGATGTG
ATT-AGCTTGTGGTTCTGGCTGTAAGCTGTTTGGTGTGGGCCTTGTGCGGCTGCTGAAAAGGTAATTATTGTCCCTGTAA
TGGGACCTTTTGGTGGTTGATCCCTTGATTGATTGATCGATCCCACCATGTTACTTGTTCGTCCCATAAATATACTGGTC
CTGAAT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>SNPs
SSS--------S-------S------------------S----S---------SS---------------------S---
------------S------------------------------------------------S-------S-----S----
----------------------------------------------------------------------------S---
SS------------S-------------------------------------S-----------S---------------
----------------------------------------SS--------------S---------------------S-
-----------------SSS--------------------S----------------S-SSSS--------SS-----S-
--S--------SS---S-S-S--------------------------------S--S-S---S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S------------------S------------------S---
---S-------------------S-S-------------S------------S---------------------------
-----------------------------------S--------------------------------------------
--------------------S-----------------------------------------------S-----------
---------------------------------------------------------------SSS-SSS----------
--------------------------------------------------------S-------S---------------
--------------------------------------------------------------------------------
----------S---------------------------------------------------------------------
-------------------S-----------------------------------------------SS-----------
--------------S-----------------------------------------------------------------
----------S------------------------------------------------------------S--------
-------------------------S------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------S-----------------------------------S--S--S--S----
-------------------------------S--S---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------S--------------------------------------------------S---
--------------------------------------------------------------------------------
S--------------------------------S----------------------------------------------
---------------------------------S---------------------------------------------S
-----------------------------------------------------------------S-----S--------
-------------------S---------S--------------------------------------------------
--------------------------------------------------------------------------------
----SSS--------------------S------SS----S-S----S-------------------------S---S--
----------------S---------S-------------------S--------S------------------------
--------------------------------------------------------------------------------
-------------S-----------------------------------S-------S----------------------
----S------------------------------S--------------------------------------------
------------------------------------S-------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------SS----------------------------------------------------------------------
----------------------------------------------------S---------------------------
--------------------S-----S-----------S-----------S-----------------------------
------------------------------------SS-----------S----------------S-------------
-----------------------S-------------------------------------------S------------
-----------S---------------------------------------------------------S----------
---------------S--------------------------------------S-------------------------
--------------------------------------------------------S--------------S--------
------------------------------------------S----------------------------S--------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S----S-------------------------------------S---------------------
--------------------------------------------------------------------------------
-------S--------------S----S------------SSS--------S---------------------S-S----
-----------S------------------------------S----SSSSSSSSS-SSSS-------------------
S--S-----------------S----------------------------S-------------------------S---
----S--------------------------------S------------------------------------------
------SSS-SSSSS-----------------S----S---------S---S-----SSSSSSSSSS------S------
------S-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_377
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------ATCCATCGTCCCCATTTGCT-----------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_2035
--------------------------------------------------------------------------------
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----------------------------------TGCTCCGAGGACAGTTGAGA--------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_1337
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------CGCTTTCTCGTCCCCAAGTTA-----------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_2317
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------TGGA
GTTGTCCGGGTTTGG-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_2035
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------GAAATGGCAAGCCTTCTGGT---------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_3707
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------ATGGCGACAAGCAAAAACCA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_3237
--------------------------------------------------------------------------------
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-----------------CACTCAGCGGCAAGAAATCG-------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_5061
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------CTAAAGTGGGGCCAACGGAT----------------------------------------
----------------------------------------------------------------------------
