>input_sequence_29299
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-----------------------ATGTATTATTTTAATGTTTTCGGGTCTTATGTGCAAAATAACAACCGAGGCACTTTA
TCATCTTCCCGAAGCGACACCCAACGAGGCACAGGGGAGGAGATTTTCCTTATCCTCCTGATGCCGCTTCTCATGCGTCT
CTCCCCACCGGCGGCGGCGCCGTTGCCGCCGTACCGGCGAAGCCACGGAGGTTCTACCACGAGATTAAACGCCGTACTCC
CCAAGACCTCAGGTGAGTGTTCATCGCCTCCCATCCGCCTACATTATTGCAGTATTGCTTGTATCTCTCGTTACCGTAAT
CCGTAATGTTGGGGCATCCCTGAGCGATGGCGACTGTCCCCTTGACCTTCATGCCTCTAATGCTTTCCAGCGTTAGATTG
GAGATGCATATTTTTTT-ATTATGTTCGACTTCGGTATGCTTGTCATAATTCATCAACTTCTTAAAAATGCTAGATGCAA
AATGTTTGGTCAAAAACCTTGTCATTAGCACAATCTATTACTGCATCGACTGTTTCTTATTCTACTAAGTACTACTCCCT
CTGTTCTAAAATAGATGACCCAACTTTGTACTAAAGTTAGTACAAAGTTGAGTCATCTATTTTGGAACGGAAGGAGTACA
TGCCATTTAATGATATCTGACATGTTATGAAATTCTGTCCCGCAGAGCGAATGTTTCTTGTAGCTAGACATGCCTCGTCG
TCGACTGATCCGGTGCGTCCTAGGAGCGACAACTTTGATATAGCTAATGGGCATGGCCATTTCCTTATCAAGTCTACATC
TGATCTTCAGGTATGATGGTGAGTCCCTCGGTCTATTTTTAGCGTTGTATCACCGTATAATCAAGATGGACCGGACCTTT
GGTTGAGCATAAAGCTGAAATATGCCTTAGTTGCCTCGAATGTGTTTTCAACAGATAGTATAGTATTATTTCAATTCTCA
GTAG--AGCTCCATTTGAACTGCTTGCAGATGCAGTCATGTTGTTGTCTCAGCTATAACGTTATACGACTCGTATCTCTT
TGCAGGAAGCTGTATCTTCTTGTTTCGGGAAAGCATTGGTGACCAGCAGTGCTGTCATGCTTGTGATGCCACCCAGTTGC
TTGGCAGAAGAATGTGACCCGGGGTACTCTCTTCCTAACATGCCACTGCTGTTTGCGATAGCCATGGTTGGTGCTACTGT
TGGAGGTAATATCACATTGTGAGCTAACAGGATCTTAGCACATAGGAAAGTGTTTGTGGCTAGCAAAGTAGCTTTAAGGT
TCTGCCCAACAATACACAATTGTTTTTCCTTATATAGTATGTTTTTTTCTGATACTTCCTCAACGTCTTGAGCAATTATG
AATATCTGGAACATTAAAAAAATATGCAAAAC--TTGAACTGCTTACAACTTCAGGGAGGC-GTAGAAATCTAATCTACA
GCCTTATACCGTTTTTTTTCTT--CTCCAAAAGCGCCCCAAAGTGTGTGTCATATTGTATTAGAAGGAGAGCACCGAGAA
GGCACAAAGTACAACTCAAGGAAACCAAAGACATGGCGCAAGTACAACTCAAGAAAACCAAAGACAAACACACATTCACG
TTTGTCTTTTTGCTTGTTATTTATTACATGA--AAAAAATGTGCATGTATCCTTGGAAGAC--GAATTCTTTCAGCCTGT
TCAAGCATGGTGCAGTTAGCTTTTGCCTATATGACTATTTCCGCCAGTGACAGTTTCTTTTGTGATGTCCATTTTCCATC
ATGCTCTTGTTTGTACAGAAAATGACATATTCAGTAGTTACTTCATG-TACTACTTATTTTCCCTTGGTTATTCTGTAAG
TTTCGTAATATGTTTGCCTCTCTGGAGGTGTAACA-TTTCCTACTTTAGATTGAACAATTCAGAAACCATGCAGGGCTCC
TTGCGAGACAAAGGAAAGGGGAACTTAAAAAGCTTAACGATCAGCTACGTCAGATAAATGCTTCACTGAGAAGACAAGCC
AAGATCGAATCTTATGCTCCTGCTTTGAGCTATGCACCGGCTGCTAGTAAGATACCAGAATCAGAAGTCATTGTTGATCC
TCACAAACAGCGCCTGCTCACATATCTGAGGACTGGGAAGAACTACCTGAGAAACCAAGCTCCAGACAAGGCATTTTCCG
AGTTTAAGGCAGCTCTTGATCTTGCACAATCTTTGGGTGATCATGTTGAAGAGAAGAAGGCGGCACGAGGATTAGGTCCG
TCATTGTTTGGCATGAATTTCATTTATCATTTGCTCGGACGCACATTTGAAACTGATTGTGCTTTGATGCGTCCTTCGTT
GCCTAGAGAGCTCAGCAGAATTTGCGCCC-TCCTGAACATGCCAATGGTAGTTTGAACATGATAATGTAAATACAATTTG
ACCATAACAAACTGAATCGTATAAACAGAGTAGCAATGCTAATTGCAAGCATTGTGGTGCCCATTTTTATTTATTTTTTT
GTGAAATCCAACTGACGGAAGTCCTTTGCGTTCATCAGGAGCGTCATTGCAAAGACAAGGAAATTACAAGGAAGCAATAA
AGTACCACTCCATGGTTCTCAGCATCTCCAAGATGACTGGAGAGGATTCAGGTGTCACTGAGGCATATGGGGCAATAGCC
GATTGCTACACCGAAGTTGGTGAGCTCGAGAAGGCAGGCAAGTTCTACGATGAGTACATTGCAAGATTGGAGAATGACTG
A-------------------------------------------------------------------------------
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---------------
>chr5D_1_TraesCS5D01G179900
TCCTCCTCCATAGCGCTTGGCGAAGCTCTGCTGGAGAACCACGAGCTCCACCACCACGTCGTCGTGCTGCCGGAGTTCTC
CCTCAACTTCTCCTCTCCCCTTGCTGGATCAAGAAGGAGGAGACGTCCCCGGGCTGTACGTGTGTTGAACGCGGAGGCGC
CGTCCGTTCGGCTCTTGGATCGGATCTTCCGCGATTTGAATCGCCGCGAGTACGACTCCATCAACCGCGTTCTTGTAACG
CTTCCGCTTAGCGATCTTCAAGGGTATGAAGATGCACTCCCTCTATCTCGTTGCTAGCTTCTCCTAGATTGATCTTGGTG
ACACGTAGGATTTTTTTTAAAATTATTACTACGTTCCCCAACAGTAATTTGTTCGTCCATCGTATGATATGTGTTCGATA
GATGCATGCTGGATAGCGGTCGATTGGTAGAGTAATAGAAGTATATGAAGGTCGGAGTCGGTCTAATTGTCACGGACATA
ATGTCTATATACATGATCATTGTCGTGAATACGTCATAACTATGCGA---------------------------TGTTCA
TCCACCGTATGATATGTGTTCGAGAGAGAAGCCTCTACTGAAAACTATGGCCCCGGGCTCT--ATTTTATCATATTGCTA
A--AAATTCAAATATACTTTGCTATAATTTATTTACTTCTATTATT----------------------ATTATTATTATT
AATAATTTCAAGTAACGAGTTTAAGGGAATTGACAACCCTCTTGCCCTCGTTGGGTGCAAGTATTTGCTTTTGTACGTAG
ATGCTGCTTAAGGAAG--TTTGTTT-GATTCTTCTACTGGTTCGATAA-TTTTAATTTTCGCTGAGAAAAATACTTATCT
TTATTATACTGTTTTACCCCTCCTCTTC-GGGAAAATTCCAGCGCAGTTTACGTGTAGCAGTTGCTCGGTGATGGTCG--
-------TCGGGGCCGTGTCCTTCCCTACTTTATCATCTTCCAGAAGCGACACCTGAATGTGAAAGCTTATTTGCGTAAA
ATCAGCGTACCGAGGAT---------------------------------------------------------------
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-------------TCAAACCAAGATGTATTATTTTAATGTTTTCGGGTCTTATGTGCAAAATAACAACCGAGGCACTTTA
TCATCTTCCCGAAGCGACACCCAACGAGGCACAGGGGAGGAGATTTTCCTTATCCTCCTGATGCCGCTTCTCATGCGTCT
CTCCCCACCGGCGGCGGCGCCGTTGCCGCCGTACCGGCGAAGCCACGGAGGTTCTACCACGAGATTAAACGCCGTACTCC
CCAAGACCTCAGGTGAGTGTTCATCGCCTCCCATCCGCCTACATTATTGCAGTATTGCTTGTATCTCTCGTTACCGTAAT
CCGTAATGTTGGGGCATCCCTGAGCGATGGCGACTGTCCCCTTGACCTTCATGCCTCTAATGCTTTCCAGCGTTAGATTG
GAGATGCATATTTTTTT-ATTATGTTCGACTTCGGTATGCTTGTCATAATTCATCAACTTCTTAAAAATGCTAGATGCAA
AATGTTTGGTCAAAAACCTTGTCATTAGCACAATCTATTACTGCATCGACTGTTTCTTATTCTACTAAGTACTACTCCCT
CTGTTCTAAAATAGATGACCCAACTTTGTACTAAAGTTAGTACAAAGTTGAGTCATCTATTTTGGAACGGAAGGAGTACA
TGCCATTTAATGATATCTGACATGTTATGAAATTCTGTCCCGCAGAGCGAATGTTTCTTGTAGCTAGACATGCCTCGTCG
TCGACTGATCCGGTGCGTCCTAGGAGCGACAACTTTGATATAGCTAATGGGCATGGCCATTTCCTTATCAAGTCTACATC
TGATCTTCAGGTATGATGGTGAGTCCCTCGGTCTATTTTTAGCGTTGTATCACCGTATAATCAAGATGGACCGGACCTTT
GGTTGAGCATAAAGCTGAAATATGCCTTAGTTGCCTCGAATGTGTTTTCAACAGATAGTATAGTATTATTTCAATTCTCA
GTAG--AGCTCCATTTGAACTGCTTGCAGATGCAGTCATGTTGTTGTCTCAGCTATAACGTTATACGACTCGTATCTCTT
TGCAGGAAGCTGTATCTTCTTGTTTCGGGAAAGCATTGGTGACCAGCAGTGCTGTCATGCTTGTGATGCCACCCAGTTGC
TTGGCAGAAGAATGTGACCCGGGGTACTCTCTTCCTAACATGCCACTGCTGTTTGCGATAGCCATGGTTGGTGCTACTGT
TGGAGGTAATATCACATTGTGAGCTAACAGGATCTTAGCACATAGGAAAGTGTTTGTGGCTAGCAAAGTAGCTTTAAGGT
TCTGCCCAACAATACACAATTGTTTTTCCTTATATAGTATGTTTTTTTCTGATACTTCCTCAACGTCTTGAGCAATTATG
AATATCTGGAACATTAAAAAAATATGCAAAAC--TTGAACTGCTTACAACTTCAGGGAGGC-GTAGAAATCTAATCTACA
GCCTTATACCGTTTTTTTTCTT--CTCCAAAAGCGCCCCAAAGTGTGTGTCATATTGTATTAGAAGGAGAGCACCGAGAA
GGCACAAAGTACAACTCAAGGAAACCAAAGACATGGCGCAAGTACAACTCAAGAAAACCAAAGACAAACACACATTCACG
TTTGTCTTTTTGCTTGTTATTTATTACATGA--AAAAAATGTGCATGTATCCTTGGAAGAC--GAATTCTTTCAGCCTGT
TCAAGCATGGTGCAGTTAGCTTTTGCCTATATGACTATTTCCGCCAGTGACAGTTTCTTTTGTGATGTCCATTTTCCATC
ATGCTCTTGTTTGTACAGAAAATGACATATTCAGTAGTTACTTCATG-TACTACTTATTTTCCCTTGGTTATTCTGTAAG
TTTCGTAATATGTTTGCCTCTCTGGAGGTGTAACA-TTTCCTACTTTAGATTGAACAATTCAGAAACCATGCAGGGCTCC
TTGCGAGACAAAGGAAAGGGGAACTTAAAAAGCTTAACGATCAGCTACGTCAGATAAATGCTTCACTGAGAAGACAAGCC
AAGATCGAATCTTATGCTCCTGCTTTGAGCTATGCACCGGCTGCTAGTAAGATACCAGAATCAGAAGTCATTGTTGATCC
TCACAAACAGCGCCTGCTCACATATCTGAGGACTGGGAAGAACTACCTGAGAAACCAAGCTCCAGACAAGGCATTTTCCG
AGTTTAAGGCAGCTCTTGATCTTGCACAATCTTTGGGTGATCATGTTGAAGAGAAGAAGGCGGCACGAGGATTAGGTCCG
TCATTGTTTGGCATGAATTTCATTTATCATTTGCTCGGACGCACATTTGAAACTGATTGTGCTTTGATGCGTCCTTCGTT
GCCTAGAGAGCTCAGCAGAATTTGCGCCC-TCCTGAACATGCCAATGGTAGTTTGAACATGATAATGTAAATACAATTTG
ACCATAACAAACTGAATCGTATAAACAGAGTAGCAATGCTAATTGCAAGCATTGTGGTGCCCATTTTTATTTATTTTTTT
GTGAAATCCAACTGACGGAAGTCCTTTGCGTTCATCAGGAGCGTCATTGCAAAGACAAGGAAATTACAAGGAAGCAATAA
AGTACCACTCCATGGTTCTCAGCATCTCCAAGATGACTGGAGAGGATTCAGGTGTCACTGAGGCATATGGGGCAATAGCC
GATTGCTACACCGAAGTTGGTGAGCTCGAGAAGGCAGGCAAGTTCTACGATGAGTACATTGCAAGATTGGAGAATGACTG
AAACTC--------------------------------------------------------------------------
--------------TGTGTGTGTGCTACCTGTGAGAATGCAAACATCGCTAAACTTTTCGTTCTTCACTAGTCATATGAT
GTTTTGTAGATGTGCAGTTCCTGGCAACAAAAAAGA--CTCTGGTTTATTATATTTTCTAAGTTGTTTCCCCTGAATTAT
GTGAGATCATTTGGGTCAGTAGCATGCTGTGTAGTTATTTTG-------------ACTGTA-------------------
--------------------------------------------------------------------------------
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AGTACAAACGAAATCAAGCTTTCGGACTTGAAAATTTTAAAGAAATACCTCAACCTATCACTGCCTGTCCGTGAATTTGT
TTTCGGTTCCTTTGCCACTTCTCATATTTGTATGCACTGCATGTGGAAACAAATACAGATTGGGCATACTTTCTGTTATA
TTGGTTAAAAGTTTGTAAATGCACCAAGCTTGAAAAATATCATAGTTCAGTATCTTATGATATGAGTAAGAAGAACACAG
TAGAAGTCTCTCATGGTGAAGGTTTTCTGCTCAAGTGTGAGCTAGGGAGGAAAGGACATGGGGTAGGGAAGGACAAGAAA
AG---AAAAAGAAGGTGTCGAGTCACAAGTGTAAGCAGCGGGTGCATATGTGGAAGGACTGTCCAGATCTCAACCATAAG
TGCTAACACG-CAGCTTTTGGTGATGACTCAGATATCCGTAGTGATGTCCTCATAGTGTCCTCGTAGTATCAGGC-----
---ACGTGGACTAAAGGTGAAACATGGATGTTGGATTCAGCTAGCACTTTTTATGTGGCTCCCAACCGGGAGTGGTTCTC
TTCGTCCAAATCTAGTGAGTTTGGTTAGCCTATATGCTTGATGGCATTGGCTAGTCGTATTGTTGAATTAGGTAACATCA
AAATCAAGTTGTTTGACGGAGTTAAGCGAGTGCTTTGAGAGTCAGGCATGTGCCAGGGCTAATAGGGAATATAATTTTGC
TTGGAATTCTTCATGATGGTGGTATGCTCTTCCATTATGACGAGGACCATGAGAATCATGAAGGATGAGGTGACCATAAT
GATGGGAGAGAGCAC
>chr5B_398
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
GATGCATGCTGGATAGCGGTCGATTGGTGGAGTAATAGAAGTATATGCAGGTCGGAGTCGGTCTACTTGTCATGGACGTA
ATGCCTATATACATGATCATTGTCATGAATACATCATAACTATGCGATTTTCTATCAATTTCCCAACAGTAATTTGTTCA
TCCACCGTATGATATGTGTTCGAGAGAGAAGCCTCTACTGAAAACTATGGCCCCA-GCTCT--ATTTTATCATATTGCTA
A--AAATCCAAATATACTTTGCTGCAATTTATTTACTTCTATTTTA--------------------TCATTATTAAAATT
AATAATTTAAAGTAATGAGTTCAAGGGGATTGACAACCCTCTTGCCCGTGTTGGGTGCAAGTATTTTCTTTTGTATGTAA
ATGCGGCTTAGGGGAG--TTTGTTT-G-TTCTCCTATTGGTTCGATAA-CCTTAATTCTCACTCACGAAAATACTTATTT
CTATGATACTACTCTACCCCTCCTCTTC-GGGGAAATTTCAGCGCAGTTTACATGTAGCTGTTGCTCGGTGATGGTCGTT
GGTAGTCTCGGGGTCGTGTCCTTCCCTACTTTATCATCTTCCGGAAGCGACACCTAAATGTGAAAGCTTTATTT------
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>chr5A_398
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-----------------------------------------------------------------------------ATA
GATGCATGCTGGATAGCGGTTGATTGGTGGAGTAATAGAAGTGTATGCAGGCCGAAGTCGGTCTATTTGTCACGCACGTA
ATGCCTATATACATGATCATTGTTGTGAATACGTCATAACTATGCGCTTTTCTATCAATTGCCCAGTAGTAATTTGTTCA
CCAACCTTATGATATGTGTTCGAGAGAGAAGTCTCTAGTGAAAACTATGGCCCCC-GGCTCTA-TTTTATCATATTGCTA
A--AAATCTGAATATACTTTGTTGCAATTTATTTAATTTTACTTTACTTTGCAATTTATCTATCTATCATTATTAGAATT
AATACTTTCAAGTAACGAGTTCAAGGGGATTGGCAACCCTCTTCCCCGCGTTGGGTGCAAGTATTTGCTTTTGTATGTAA
ATGTTGCTTAGGGGAG--TTTGTTTGG-TTCTCCTATTGGTTCGATAA-CCTTAATTCTCATTGAGGAAAATACTTATCT
CTACTGTAGTGCTTTACCCCTCCTCTTC-GGGGAAATCCTAGCGCAGTTTACAAGTAGCAGTTGCTCGATGATGGTCGTC
GGCAGTCTCGAAGCCGTGTCCTTGCCTACTTTATCATCTTCTAGAAGCGACACCTAAATGTGAAAGCTTATTTGCGTAAA
ATCAGGGTACAGAGGATTCAATCTATTCCATTCATGGCTTTGATCCAGTTGATGCACGTAATACATGCAATTGCTATAGT
GAACAGAGATGTTGAGGCTGAAGACGTTTTCACTTGGCCCGCATCCATCACCGAGAGTTACTCTGCCAAATCCACATATA
CCTGTCTGTGCCAAGGCATGAAGAAATCTCCTACAGCTGGCTGCATTTGGCGAAGTTGGGCTCCTCTAAAACGCAAAATA
TTTGCGTGGCTTGCAGCCCAATACCGCCTGTGGACATCGGATAGAAGGCTCTGCACGGATTGCAAGACTCACCCTCCGCT
TGCTACACCTACCTTCAAGAGGAAGACAATGTTGATCATATTCTTACACAGTGTGTGTACCCTAGAGAAGTTTTGCACAC
TTGCTTCGACTTGCTACAGCTCAACTTGTCTGGACCGGTCGCTGACGATACCTTTGTTGATTGGTGGCTCAGAACTAGGA
AGAGGTTCAAGACTAGTGATAGGCGTGGATTCGACACTGGTGCTGGGGACGGCATGGGCGATTTGAAAGCAGAGGAACGC
TAGAATCTTCAATCGCCCGGAATAGATGGAACAGCTGTTGGGTCTGGCTATGTGTATCACCAGTGAGATTAGGGGGTGGA
GGGATGCCAGAGGTGGTGTAGGAGGTCTAGATCGTTTGAGAAGTTAGTTTTAGACTAGTGGGTGTGTGGAGGTGTCCATT
GATTGATGTTCGCATCATTCGATGGGTTCTTGTAAATCTTTTGCTCTCTTCTATAAAAGTAAGGTACGCTTTTGGCGTAT
TCTTGAAAAAAAATCAAACCAAGATGTATTATTTTAATATTGTCGGGTCATATGTGCAAAATAACAACCGAGGCACTTTA
TCATCTTCCCGAAGCGACACCCAACGAGGCACA-GGGAGGAGATTTTCCTTATCCTCCTGATGCCGCTTCTCATGCGTCT
CTCCCCACCGGCGGCGGCGCCGTCGCCGCCGTACCGGCGAAGCCACGGAGGTTCTACCACGAGATTATACGCCGTACTCC
CCGAGACCTCAGGTGAGTGTTCATCGCCTCCCATCCACCTACATTATTGCAGTATTGCTTGTATCTCTCGTTACCGT---
----AATGTTGGGGCATCCCTGAGCGATGGCGACTGTCCCCTTGACCTCCATGCCTCTAATGCTTTCCAGCGTTAGATTG
GAGATGCATATTTTTTTTATTATGTTCCACTTCGGTATGCTTGTCATAATTCATCAACTTCTTAAAAATGCTAGATGCAA
AATGTTTGGTCAAAAACCTTGTCAT-AGCACAATCTGTTACTGCATCGACTGTTTCTTATTCTACTATAC----------
----------------------------------------------------------------------------TACA
TGCCATTTAATGATATCTGACATGTTATGGAATTCTGTCCTGCAGAGCGAATGTTTCTTGTAGCTAGACATGCCTCGTCG
TCGACTGATCCGGTGCGTCCTGGGAGCGACAACTTTGATATAGCTAATGGACATGGTCATGTCCTTATCAAGTCTACATC
TGATCTTCAGGTATGATGGTGAGTCCCTCGGTCTATTTTTCGCGTTGCATCACCGAATAATCAAGATGGACCGGACCTTT
G-TTGAGCATAAAGCTGAAATATGCTTTAGTTGCCTTGAATGTATTTTCAACGGATAGTATAGTATTATTTCAATTCTCA
GTAGGGAGCTCCATTTGAACTGCTTGCAGATACAGTTATGTTGATGTCTCAGCTACAACTTTATACGATTTGTATCTCTT
TGCAGAAAGCTGTATCTTCTTGTTTCGGGAAAGCATTGGTGACCAGCAGTGCTGTCATGCTTGTGATGCCGCCCAGTTGC
TTGGCAGAAGAATGCGACCCGGGGTACTCTCTTCCTAACATGCCGCTGTTGTTTGCGATAGCCATGGTCGGTGCTACTGT
TGGAGGTAATATCACATTGTCA------AGGATCTTAGCACGTAGGAAATTGTTTGTGGCTAGCAAACTAGCTTTAAGTT
TCAGCCCAACACTACACAATTGATTTTCCTTATATTA------TTTTTTTAATACTTCATCAACATCTTGAGCAGTTATG
AATATCAAACATT---AAAAAATATGCAATTTTTTTGAACTGCTGACAACTTCTGGGAGACGGTAGAAATCTAATCTACA
GCCTTATAAAGCTTATTTT-TTTTCTCCAAAAGCGCCCCAAAGTGTGTGTCATATTGTATTAGAAGGAAAGCGCCAAGAA
GGCACAAAGTACAACTCAACGAAACCAGAGACATTGTGCAAGTACAACTCGAGAAAACCAAAGACAAACAAACATTCACG
TTTGTCTTTTTGCTTGCTATTTATTAGTACATGAAAAACAGTGTATGTATCCTTA-AAGACCTGAATTCTTTCAGCTTGT
TCAAGCATGTTGCGGTTAGCTTTTGCCTATATGACTATTTCTGCCAATGACTGTTTCTTTTGTGATGGCCGTTTTCCATC
ATGCTCTTGTTTGTAGAGAAAATGACATATGCAGTAGTTACTACTTCATACTGCTTAGTTACCCTTGGTTATTCTGTAAG
TTCTGTAATATGTTTGTCTCTCTGGAGGTGCAACATTTTCCTACTTTAGATTGAACAATTCAGAAACCCTGTAGGGCTCC
TTGCGAGACAAAGGAAAGGGGAACTTAAAAAGCTTAACGATCAGCTACGACAGATAAATGCTTCACTGAGAAGACAAGCC
AAGATAGAATCCTATGCTCCTGCTTTGAGCTATGCACCGGCTGCTAGTAAGATACCAGAATCAGAAGTCATTGTTGATCC
TCACAAACAGCGCCTGCTCACATATCTGAGGACTGGGAAGAACTACCTGAGAAACCAAGCTCCAGACAAGGCATTTTCCG
AGTTTAAGGCAGCTCTTGATCTTGCACAATCTTTGGGTGATCATGTTGAAGAGAAGAAGGCGGCACGAGGATTAGGTCCG
TCATTGTTTGGCATGAATTTCATTTATCATTTGCTTGTACGCACATTTGAAACTGATCGTGCTTTGATGCGTACTTCGTT
GCCTAGAGAGCTCAGCAGAATTTGCGCCCCTCCTGAACATGCCAATGATAGTTTGAACATGATAATGTAAATACAATTTC
ACCATAACAAACTGAATCGTATAAACAGAGTAGCAGTACTAATTGCAAGCATTGTGGTGCCCATTTTTATTTACTTTT-T
GTGAAATCCAACTGACGGAAGTCCTTTGCGTTCATCAGGAGCATCATTGCAAAGACAAGGAAATTACAAGGAAGCAATAA
AGTACCACTCCATGGTTCTCAGCATCTCCAAGATGACTGGAGAGGATTCTGGTGTCACTGAGGCATATGGGGCAATAGCC
GATTGCTACACCGAAGTTGGTGAGCTCGAGAAGGCAGGCAAGTTCTACGATGAGTACATTGCAAGATTGGAGAATGACTG
AAAA----------------------------------------------------------------------------
------TGTGTGTGTGTGCGCGCGCTACCTGTGAGAATGCAAACACCGCTAAACTTTTTGTTCTTCACTAGTCATATGAT
GTCTTGTAGATGTGCAGTTCCTGGCAACAAAAAAGA--CT--GGTTTATTATATCTTCTAAGTTGTTTCCCCTGAATTAT
GTGAGATCATTTGGGTCAGTAGCATGCTGTGTAGTTATTTTGGTAGTAATAGCTTACTGTA-------------------
--------------------------------------------------------------------------------
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AGTACAAATGAAATCCAGCTTTCCGACTTGAAAATTTTAAAGAAATACCTCAACCTATCACTGCCTGTCC-TGAATTTGT
TTTCAGTTCCTTTGCCACTTCTCATATTTGTAAT----------------------------------------------
--------------------------------------------------------------------------------
---------------GTGAAGGTTTTCTGCTCAAGTGTGAGCTAGGGAGGAAAGGACATGGGGTAGGGAAGGACAAGAAA
AG---AAAAAG---GTGTCGAGTCACAAGTGTAAGCAACGGGTACATATGAGAAAGGACTGTCCAGATCTCAACCGTAAG
TGCTAACATGGC--CTTTTGGTGATGACTCAGATATCCGTAGTGATGTCCTTGCAGTGTCCTCATAGTATCAGGC-----
---A---------AAGGTGAAGCGTGGATGTTGGATTCAGCTAGCACTTTTTATGTGGCTCCCAACCGGGAGTGGTTCTC
TTCGTCCAAATCTATTGAGTTTGGTTAGCCTATATGCTTGATGGCATTGGCTAGCCGTATTGTTGAAGTAGGTGACATCA
AAACCAAGATGTTTGACGAAGTTAAGCAGTGCTTT-----GTCAGGCATGTGCCGGGGCTAAGAGGGAATATAATTTCGC
TTTGAATTCTTCATGATGGTGGTATGTTCTTTCATTGTGATGAGGACCATGAGAATCATGAAGGATGAGGTGACCATAAT
GATGGGAGAGAGCA-
>chr2D_398
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------ATA
GATGCATGCTGGATAGCGGTCGATTGGTGGAGTAATAGTAGTAGATGTAGGCAGGAGTTGGTCTAATTGTCACAGACGTG
ATGCCTATATACATGATCATTGCCATGAATACGTCATAACTATGCGCTTTTCTATCAATTTCTCAACGGTAATTTGTTTA
CCAATCGTATGCTATGTGTTCGAGAGAGATGCCTCTAGTGAAAACTATGGCCCCA-GGGTCTAATTTTATCATATTGCTA
A--AA--CCAAAAATACTTTGCTGAAATTTTACTATTTTTATTTTACTTTTCTTTTTATCTATCTATCT-TATCAGAATT
AATCCTTGCAAGTAATGAGTACAAGGGGATTGACAACCCTCTTGTCCGCATTGGGTGCAAGTATTTGCTTTTGTGTGTGT
AGGTGTTGTCGAATGGAATTTGCTTGG-TTCTCATATTGGTTCGGTAA-CCTTGGTTCTCACTG-GGGAAATACTTATCT
CTAATGTACTGCTTCACCCCTCCTCTTCTAGGAAAATCCTAACGCAGCTTACAAGTAGCAGT------------------
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>chr4A_398
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-----------------------------------------------------------------------------ATA
GATGCATGCTGGATAGCGGTCGATTGGTGGAGTAATAGTAGTAGATGCAGGCAGGAGTCGGTCTACTTGTCTCGGATGTG
ATGCCTATATACATGATCATTGTCGTGAATACGTCATAACTATGCGCTTTTCTATCAATTGCCCAACAGTAATTTGTTCG
CCCGCC-TATGCTATGTGTTCGAGAGAGAAGCCTCTAGTGAAAACTATGGCCCT--GGGTCTACTTTTATCATATTAT--
A--AAATCCAAAATTACATTGTTGCAATTTATTTACTTCTGTTTTATTTTGCAATTGATCTATCTACCTATAAAAAAATT
GATGCTTGCAAGTAACGAGTTCAAGGGGATTGACAACCCTCTTGCCAGTGTTGGGTGCAAGTATTTGCTTTTGTGTCTGT
AGGTGTTGTTCATGAGGCTTTGCGAGA-GCCTCCTATTGGTTCGATAAACCTTGGTTCTCACTGAGGGAAATAGTTATCT
CTATTGTACTGCATCTCCACTCCTCTTCGGG-------------------------------------------------
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>chr4A_398
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-----------------------------------------------------------------------------ATA
GATGCATGCTGGATAGCGGTCGATTGGTGGAGTAATAGTAGTAGATGCAGGCAGGAGTAGGTCTACTTGTCTCATACGTG
ATGCCTATATACATGATCATTGCCGTGAATACGTCATAACTATGCGATTTTCTATCAATTGCCCAACAGTAATTTATTTA
CCCACCGTATGCTATGTGTTCGAGAGAGAAGACTCTAGTGAAAACTATGGCCCCC-GGGTCTACTTTTATCATATTAT--
AAGAA--CCAAAAATACTTTGCTGCAATTTATTTACTTTTATTTAGTTTTGCAATTTATCTATCTACCACTACAAGATTT
CATCATTGCAAGTAACGAGTTCAATGGGACTGACAACCCTCTTGCCCATGTTGGGTGCAAGTTTTTTCTTTTGTGCGTGC
AGGTGTTGTTCATGAGGCTTTGCGTGA-TTCTCCTATTTGTTGGATAAACATTGGTTCTCATTGAGGGAAATACTTATCT
CTACTGTATTGGATCTCCTCTCCTCTTAGGGGAAAATCCAGATGCAGCTCACAAGTAGCATTGCTC--------------
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---------------
>chr5B_971
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------AAA
ATCAGGGTACTGGGGAT---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------TCAAACCAAGATGTATTATTTTAATATTTTCGGGTCTTATGCGCAAAAAAACAACCGAGGCACTTTA
TCATCTTCCCGAAGCGACACCCAACCAGGCACAGGGGAGGAGATTTTCCTTATCCTCCTGATGCCGCTTCTAATGCGTCT
CTCCCCACCGGCGGCGGCGCCGTCGCCGCAGTACCGGCGAAGCCACGGAGGTTCTACCACGAGATTAAACGCCGTACTCC
CCGAGACCTCAGGTGAGTGTTCATCGCCTCCCATCCACCTACATTATTGCAGTATTGCTTGTATCTCTCGTTACCGT---
----AATGTTGGGGCATCCCTGAGCGATGGCGACTATCCCCTTGACCTTCATGCCTTTAATGCTTTCCAGCGTTAGATTG
GAGATGCATATTTTTTTTATTATGTTCGACTTCGGTATGCTTGTCATAATTCATCAACTTCTTAAAAATGCTAGATGCAA
AATGTTTGGTCAAAAACCTTGTCATTAGCACAATCTATTACTGCATCGACTGTTTCTTATTCTACT--AC----------
----------------------------------------------------------------------------TACA
TGCCATTTAATGATATCTGACATGTTATGTAATTCTGTCCCGCAGAGCGAATGTTTCTTGTAGCTAGACATGCCTCATCG
TCGACTGATGCGGTGCGTCCTAGGAGCGACAACTTTGATATAGCTAATGGACATGGTCATTTCCTTATCAAGTCTACATC
TGATCTTCAGGTATGATGGTGAGTCTCTCGATCTATTTTTAGCGTTGTATCACCGAATAATCAAGATGGACCGGACCTTT
GATTGAGCATAAAGCTGAAATATGCCTTACTTGCCTTGAATGTGTTTTCAACGGATAGTATAGTATTATTTCAATTCTCA
GTAG--AGCTCCATTTGAACTGCTTGCAGATGCAGTTATGTTGATGTCTCAGCTATAACGTTATACGACTCATATCTCTT
TGCAGGAAGCTGTATCTTCTTGTTTCGGGAAAGCATTGGTGACCAGCAGTGCTGTCATGCTTGCGATGCCACCCAGTTGC
TTGGCAGAAGAATGTGACCCGGGGTACTCTCTTCCTAACATGCCGCTGCTGTTTGCGATAGCCATGGTTGGTGCTACTGT
TGGAGGTAATATCACATTGTAAGCTAACAGGATCTTAGCACATAGGAAAGTGTTTGTGGCTAGCAAAGTAGCTTTAAGGT
TCAGCCCAACACTACACAATTGTTTTTCCTTATATAGTATGTTTTTTTCTGATACTTCCTCAACGTCTTGAGCAATTATG
AATATCTGGAACATTAAAAAAATATGCAAAAC--TTGAACTGCTGACAACTTCAGGGAGGC-GTAGAAATCTAATCTACA
GCCTTATAACGTTTTTTTT-TT--CTCCAAAAGCGCCCCAAAGTGTGTGTCATATTGTATTAGAAGGAGAGCACCGAGAA
GGCACAAAGTACAACTCAACGAAACCAAAGACATGGCGCAAGTACAACTCAAGAAAACCAAAGACAAACACACATTCACT
TTTGTCTTTTTGCTTGTTATTTATTACATGA--AAAAAATGTGTATGTATCCTTA-AAGAC--GAATTCTTTCAGCCTGT
TCAAGCATGGTGCAGTTAGCTTTTGCCTATATGACTATTTCCGGCAATGACAGTTTCTTTTGTGATGTCCGTTTTCCATC
ATGCTCTTGTTTGTACAGAAAATGACAT-TTCAGTAGTTACTTCATG-TAGTACTTATTTTCCCTTGGTTATTCCGTAAG
CTCCGTAATATGTTTGCCTCTCTGGAGGTGCAACATTT-CCTACTTTACATTGAACAATTCAGAAACCATGCAGGGCTCC
TTGCGAGACAAAGGAAAGGGGAACTTAAAAAGCTTAATGATCAGCTACGTCAGATAAATGCTTCACTGAGAAGACAAGCC
AAGATCGAATCTTATGCTCCTGCTTTGAGCTATGCACCGGCTGCTAGTAAGATACCAGAATCAGAAGTCATTGTTGATCC
TCACAAACAGCGCCTGCTCGCATATCTGAGGACTGGGAAGAACTACCTGAGAAACCAAGCTCCAGACAAGGCATTTTCCG
AGTTTAAGGCAGCTCTTGATCTTGCACAATCTTTGGGTGATCATGTTGAAGAGAAGAAGGCGGCACGAGGATTAGGTCCG
TCATTGTTTGGCATGAATTTCATTTATCATTTGCTCGTACGCACATTTGAAACTGATTGTGCTTTGATGCATCTTTCGTT
GCCTAGAGAGCTCAGCAGAATTTGCGCCC-TTCTGAACATGCCAATGGTAGTTTGAACATGATAATGTAAATACAATTTC
ACCATAACAAACTGAATCGTATAAACAGAGTAGCAGTACTAATTGCAAGCATTGTGGTGCCCATTTTTATTTATTTATTG
TGAATCCA-AACTGACGGAAGTCCTTTGCGTTCATCAGGAGCATCATTGCAAAGACAAGGAAATTACAAGGAAGCAATAA
AGTACCACTCCATGGTTCTCAGCATCTCCAAGATGACTGGAGAGGATTCAGGTGTCACTGAGGCATATGGGGCAATAGCC
GATTGCTACACCGAAGTTGGTGAGCTCGAGAAGGCAGGCAAGTTCTACGATGAGTACATTGCAAGATTGGAGAATGACTG
AAACAGTGTGTGTGTGTGTGTGTGTGTGCGCGCGCGCACGCGCGCGCGCGTGCGTGCGTGCGTGCGTGCGTGCATGTGTG
TGTGTGTGTGTGTGTGTGTGTGTGCTACCTGTGAGAATGCAAACACCACTAAACTTTTCGTTCTTCACTAGTCATATGAT
GTTTTGTAGATGTGCAGTTCCTGTCAACAAAAAAGACTCT--GGTTTATTATATCTTCTAAGTTGTTTCCCCTGAATTAT
GTGAGATCATTTGGGTCAGTAGCATGCTGTGTAGTTATTTTGGTAGTAATAGCTTACTGTAAGTACTCCCTCCGTTTCTT
TTTAGTCTGCATATAAGGTTTGGTCAAAGTCAAGCTTTGTAGAGTTTGACTAACTTTATATTAAAAAATATAAACATTCA
CAATATGAAATCAATATTATCATATGCACCATGAAACGTATTTTCATACTATATAGTTTCAGTATTGTAGATGTTCATAT
TTTTTTATATAAATTTGGTCAAACTTTGTGTAGTTTGACTTTAACCAAATCTTATATGCGGAGTAAAAAGAAACGGAGGG
AGTACAAACGAAATCCAGCTTTCCGACTTGAAAATTTTAAAGAAATACCTCAACCTATCACTGCCTGTCCCTGAATTTGT
TTTCAGTTCCTTTGCCACTTCTCATATTTGTATGCACTGCATGTGGAAACAAATACAGATTGGGCATACTTTATGTTAT-
-TGGTTAAAAGTTTGTAACAGCACCAAGCTTGAAAAATATCATAGTTCAGTATCTTATGATATGAGAAAGAAGAACACAG
TAGAAGTCTCTCATGGTGAAGGTTTTCTGCTCAAGTGTGAGCTAGGGAGGAAAGGACATGGGGTAGGGAAGGACAAGAAA
AGGAAAAGAAG---GTGTCGAGTCACAAGTGTAAGCAGCGCGTACATACGTGGAAGGACTGTCCAGATCTCAATCGTAAG
TGCTAACACGACAGCTTTTGGTGATGACTCAGATATCCGTAGTGATGTCCTCATAGTGTCCTCGTAGTATCGGCACGTGG
ACTA---------AAGGTGAAGCGTGGATGTTGGATTCAGCTAGTACTTCTTATGTGGCTCCCAACCAGGAGTGGTTCTC
TTCGTTCAAATCTAGTGAGTTTGGTTAGCCTATATGCTTGATGGCATTGGCTAGTCGTATTGCTGAAGTAGGTGACATCA
AAATCAAGTTGTTTGACGGAGTTAAGCGAGTGCTTTGAGAGTCAGCCATGTGCCAGGGCTAAGAGGGAATATCATTTTGC
TTGGAATTCTTCATGATGGTGGTATGCTCTTCCATTTTGACGAGGACCATGAGAATCATGAAGGATGAGGTGACCATAAT
GATGGGAGAGAGCAC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---
----------------------------S------------------S-----------------------------S--
---S----------------------------------------------------------------------------
------------------------------------------------------SS------------------------
-------S---------------SS------------------S-S-----------------------------SS---
---------------------S-----S-------------------S-------------------------------S
----------S--S-------------S----S---S------------SS------S--S-----S-------------
S----------S----------------------------------------S---------------------------
-------------------------------------------------------S------------------------
-----S----S---------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--S---------------------------------S----------------------------------------SSS
SSSS----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------SSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS----
-----------------------------S--------------------------------------------------
--------------------------------------------------S-----S-----------------------
-------------------------------------------------------S------------------------
-S----------------------------------S---------------S---------------------------
------------------------------------S------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------------------S-----------------------------------------------------------
--S--------S--------------------------------------------------------------------
--------------------------------------------S-----------------------------------
--------S----------S------------------------------------------------------------
-------------------S------------------------------------------------------------
-------------------------------------------S----------SS------------------------
----------------------------------------------S-----------------------S---------
--------------------------------------------------------------------------------
--S---------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------S------------------------------------------
-------------------------------------------------------------------------------S
-----------------------------------S-S------------------------------------------
------------------------------------------S-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----SS--------------------------------------------------------------------------
---------------------------------------------S----------------------------------
----------------------------------------SS------------S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------S-------S----------------------------------------------S---------
----S-------------------------------------------------------------------S------S
S-----------------SS----------------------------------------------S-------------
--------------------------------------------------------------------------------
-----------SSS-----------------------------S-------------------------------S----
--------------------------------------------------------------------------------
----SSSSSSSSS--------S-S--------------------------------------------------------
-------------------------------------------------------------------S-----S------
--------------------------------------------------------------S-----------------
------------------------------------S-------------------------------------------
---------------
>forward_616
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------ACTGAAAACTATGGCCCCGG------------------------
--------------------------------------------------------------------------------
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---------------
>reverse_3005
--------------------------------------------------------------------------------
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--------------------------------------------ACTGCTGTTTGCGATAGCCA----------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>forward_1016
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------TCTTCCAGAAGCGACACCTG------------------------
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---------------
>reverse_3380
--------------------------------------------------------------------------------
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-------------------GGAAACCAAAGACATGGCGC-----------------------------------------
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--------------------------------------------------------------------------------
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---------------
>forward_2722
--------------------------------------------------------------------------------
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--------------------------------------------------------------AAGATGGACCGGACCTTT
GG------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------
>reverse_4565
--------------------------------------------------------------------------------
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----TCTGTGTGTGTGCTACCTGT--------------------------------------------------------
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--------------------------------------------------------------------------------
---------------
