>input_sequence_29265
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---------------ATGTCTCCGCTCGCTGAGCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGA
GTACATATGGTAACATCGCTCTG----------CTCCCTCTTCCTCAGCACTGTCCCAACCTCCCATCTCATCTTCCTTC
CA------------------------------------------------------------------------------
---------------AGTTAGGCAGGCCACAGAT--TTTTTGTCCTCCCCACAAATCCCATCTGACGTTTCTTT------
-AGTTTAGTT----------------------------------------------------------------------
---TACTAGTGGGTTTCTCAAATTT-GAGCCCGGTAAAAACCCTTCTCGTC-----TTGTTTTTACTCCTTGATGATCTG
TTGCCAATATGGTGTTTTTCTTTTTT----------CTTTGTTAGACGTTTGGCTCTATGCATCTTAGCTATGCGTTGGC
CGGGTGCCGCTCATCATGATATATACCTGCATGATGCTGGTACTTTCTCTGTAAAAAAAATATAAG--------------
-----------------ACGCTCTTATATTTCTCTATGAAT-------GGAGTACATCATAAGTTAATAAAATGGGAAAA
TCGGCATCGTACTTTTAGGCCTTAATACTGGTCTACTTCTATTTACACCTTGCCTTGCCTAATTCAGGGTCGGCGGCACC
GGGATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCTCGACGACTCATAACTTTGCCGGCCGGCTCCTTTTT
GTCC-AG-----CTGTGACGGCACTGCAAATATGTTCCTAAT-TAACACTTCTTGTGACCC-TTTTGATGCCTTGGATAT
TCACAATCAGACGCTGCCCGGACCCGTCGATGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCC
AAGCCACGGGTGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAACCC---TGCCTTGGCTT
GCGTGCCTTGAGGCTGAGCTGATCTGAATTTCATGTGTTGCTTCTCCCAAGCCCTCAGGCCATCTTCAGGGACCCGTTCA
GGAAGGGGAACAACATCCTGGTA----AGAATGATCAAGATCTTCCCTTTTTTTTTACTCATGGGTTTCGTATCGTTGTT
------------------------------------------------------TTGTTTATTTGTGTGAATGAATTTTG
AAAA-TTGTTCATGAATGCTTTTTCACCTGTGGTAAATTGTTTTTAACCT---CGTTTAGGTCATCTGTGACTGCTATGC
GCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCAGCGAGGATATTCGGCCACCCTGATGTCAAGGATGAAG
AACCATGGTCAG----TA-TCAGTTGCTCTGTTCTTTAGAAATTAGTCGACTGA-TTAATTTTTGCACATAATTTTATTT
ATGTGGCAATTAATCTTGTGACACCCTCTTATGTTGCCTGAAATGTAAGGTATGGGATTGAGCAGGAGTACACCCTTCTT
CAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCAGGTAACTTAACTAGACATGTTCCA
TACTGCAGCACTCTTATT------AAGTCTTAACCAAGATCGCTCCCCTAAACAAGGGAGGAAACTTGGCTGTAAATGCT
ATTATAGCTTAGCACTTGCTGATAACAGTTCAAAAATGTTGGACCGATAGTGACACTGACAGAGCAAAATGTGTGTGACA
GGGACCTTACTACTGCGCCGTGGGTGCAGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCT
ACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGGAATACCTTCACTT
GGATGCCCCTTATTCCTATCAAAATTGTTCATGGACTGATTTCTCTCTGAACCAACCAGTGGGAGTTCCAAGTTGGCCCT
TCCGTCGGCATCTCTGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATAAAACTACTGCCTCATCTAG
TGAAATGAATCAAAT-----GCAACATTTTGTAATAAGAACAA-TTTTGTTTTGTGTAACCCAACAGAGGATCACTGAGA
TTGCTGGCGTCGTCGTCTCCTTCGACCCCAAACCGATCCCGGTGAGCATTTCTTCTTCTTCTTCTTCTTGTGCCA-AAAT
TTCAGCTCGATCTGCCGTTTCACTGGCCAGC-AGCGATATGTAACTGTGTATATGTGTGTGACTGTAGGGAGAGTGGAAT
GGTGCTGGTGCCCACACAAACTACAGGTAAGATACAGAGAGGAAGCCAAGGGATGCATCTCCGTCTGC-----TCTAGTC
TTGTGTCATGGGTTATGACATGATCCTGCCGATG---TCTGAATGCAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACG
AGGTGATCAAGAAGGCGATCCAGAAGCTGGAGGCGCGGCACATGGACCACATCGCCGCCTACGGCGAGGGCAACGAACGC
CGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTCTGGGTAAGCACGAAAGCCCCACGGGGAG-------
--TCCAGACTTCAGACAGAGTCACCACCATTGCTGCTCTTCTCTTACTGCTTTCCGGCTGCATTGTTTGTTTGTTTTT-G
CAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGACAAGGAAGGCAAGGGGTACTTCGAGGACCG
GAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGACACCACCATCCTCTGGAACGCCGGCCTCT
CCAATGGCAGGTAG------------------------------------------------------------------
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-------------------------------
>chr4A_1_TraesCS4A01G266900
GGGGCTGGCACCCGGGCGGAGCGGCGGAGGTTTGGCAAGGCCTGGGCGGCGGAGTGGGTGTTACGGCGACGGTGGCAGAT
CGACTACTGGAT--TCAGAGCAAGGGCGTGGGGTCGGAGAGAGAAGAGCGGGGCTCTAGGCGGGTTTTTGTGTGGGCCAG
GTGTGTCAGATGCTTGCGTGGTGGTTGTCCGGAGGTCCGCAAACCTCCTCCTCATGTATGCTTACGGTTTATGGGAATTC
GGACGGCCAACCCGATTCACGAGCCGACGAACCCTTTGATGTATGACATCGGATGACACAAAGAATCCGAACCCTAGACG
TTTGGCAGCATTTTTGATGATGAAGG--GCGTTGGAGACGCCCTAAGCGTCTG-------CTAGAGTTGGCTGTGCATTT
CCTCATGAACTCGTTAGGTGAATGTATTTTGTCGTCCACGAGATAAT---------------------------------
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---------------------------------------------------------------GATAGGCACGGTGGGTA
TAAAAGATTTGCTACTAGCGTGTTCAGGA----------------------------------------------AGTTG
CACGGTGGTCGCTTTCCTACATATCTTGCCGGTGTCA-----CTCACGTCTCACTCATGTCACCATCTAACTTTGACCCC
TCGGGAAGATCCGTCGGGTCAGTCAGTCCACTGGGATCTGCACTGCACGGACGCTGGGACAAGAGAACGTGAATTTGCCC
TTCACCACC-----------------------------------------------------------------------
-----------------------------------------------------------------------------GGT
GTGCGGATCAGCGAAGCGCGGCGCGCTTGTCCGTACGCATGGGATCGAATCGGATCACAGCGAAGCGCGCCGGCGTCCCG
TGCACAGTGGAAAAGGGGTGCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCAG------
---------------------CCGCCCGCAACGCCCACCAACCTTTCGGGGGCAGGGGCTC-GTCGCCACGCTACTTATA
GAGGGGCAG-------------GGCACCACTCGGCTCGCTCCTCTGTCCCGCATTCCCAACA------------------
---ACACCTCTCCCTCCGCTTGCTCTGCCCTCTCCATCACCGCCTCCATCTCCGGCGACCGGGGGAAGAAGAAGAAGAAG
TAGCA-------GCCATGTCTCCGCTCGCTGAGCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGA
GTACATATGGTAACATCGCTCTG----------CTCCCTCTTCCTCAGCACTGTCCCAACCTCCCATCTCATCTTCCTTC
CA------------------------------------------------------------------------------
---------------AGTTAGGCAGGCCACAGAT--TTTTTGTCCTCCCCACAAATCCCATCTGACGTTTCTTT------
-AGTTTAGTT----------------------------------------------------------------------
---TACTAGTGGGTTTCTCAAATTT-GAGCCCGGTAAAAACCCTTCTCGTC-----TTGTTTTTACTCCTTGATGATCTG
TTGCCAATATGGTGTTTTTCTTTTTT----------CTTTGTTAGACGTTTGGCTCTATGCATCTTAGCTATGCGTTGGC
CGGGTGCCGCTCATCATGATATATACCTGCATGATGCTGGTACTTTCTCTGTAAAAAAAATATAAG--------------
-----------------ACGCTCTTATATTTCTCTATGAAT-------GGAGTACATCATAAGTTAATAAAATGGGAAAA
TCGGCATCGTACTTTTAGGCCTTAATACTGGTCTACTTCTATTTACACCTTGCCTTGCCTAATTCAGGGTCGGCGGCACC
GGGATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCTCGACGACTCATAACTTTGCCGGCCGGCTCCTTTTT
GTCC-AG-----CTGTGACGGCACTGCAAATATGTTCCTAAT-TAACACTTCTTGTGACCC-TTTTGATGCCTTGGATAT
TCACAATCAGACGCTGCCCGGACCCGTCGATGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCC
AAGCCACGGGTGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAACCC---TGCCTTGGCTT
GCGTGCCTTGAGGCTGAGCTGATCTGAATTTCATGTGTTGCTTCTCCCAAGCCCTCAGGCCATCTTCAGGGACCCGTTCA
GGAAGGGGAACAACATCCTGGTA----AGAATGATCAAGATCTTCCCTTTTTTTTTACTCATGGGTTTCGTATCGTTGTT
------------------------------------------------------TTGTTTATTTGTGTGAATGAATTTTG
AAAA-TTGTTCATGAATGCTTTTTCACCTGTGGTAAATTGTTTTTAACCT---CGTTTAGGTCATCTGTGACTGCTATGC
GCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCAGCGAGGATATTCGGCCACCCTGATGTCAAGGATGAAG
AACCATGGTCAG----TA-TCAGTTGCTCTGTTCTTTAGAAATTAGTCGACTGA-TTAATTTTTGCACATAATTTTATTT
ATGTGGCAATTAATCTTGTGACACCCTCTTATGTTGCCTGAAATGTAAGGTATGGGATTGAGCAGGAGTACACCCTTCTT
CAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCAGGTAACTTAACTAGACATGTTCCA
TACTGCAGCACTCTTATT------AAGTCTTAACCAAGATCGCTCCCCTAAACAAGGGAGGAAACTTGGCTGTAAATGCT
ATTATAGCTTAGCACTTGCTGATAACAGTTCAAAAATGTTGGACCGATAGTGACACTGACAGAGCAAAATGTGTGTGACA
GGGACCTTACTACTGCGCCGTGGGTGCAGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCT
ACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGGAATACCTTCACTT
GGATGCCCCTTATTCCTATCAAAATTGTTCATGGACTGATTTCTCTCTGAACCAACCAGTGGGAGTTCCAAGTTGGCCCT
TCCGTCGGCATCTCTGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATAAAACTACTGCCTCATCTAG
TGAAATGAATCAAAT-----GCAACATTTTGTAATAAGAACAA-TTTTGTTTTGTGTAACCCAACAGAGGATCACTGAGA
TTGCTGGCGTCGTCGTCTCCTTCGACCCCAAACCGATCCCGGTGAGCATTTCTTCTTCTTCTTCTTCTTGTGCCA-AAAT
TTCAGCTCGATCTGCCGTTTCACTGGCCAGC-AGCGATATGTAACTGTGTATATGTGTGTGACTGTAGGGAGAGTGGAAT
GGTGCTGGTGCCCACACAAACTACAGGTAAGATACAGAGAGGAAGCCAAGGGATGCATCTCCGTCTGC-----TCTAGTC
TTGTGTCATGGGTTATGACATGATCCTGCCGATG---TCTGAATGCAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACG
AGGTGATCAAGAAGGCGATCCAGAAGCTGGAGGCGCGGCACATGGACCACATCGCCGCCTACGGCGAGGGCAACGAACGC
CGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTCTGGGTAAGCACGAAAGCCCCACGGGGAG-------
--TCCAGACTTCAGACAGAGTCACCACCATTGCTGCTCTTCTCTTACTGCTTTCCGGCTGCATTGTTTGTTTGTTTTT-G
CAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGACAAGGAAGGCAAGGGGTACTTCGAGGACCG
GAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGACACCACCATCCTCTGGAACGCCGGCCTCT
CCAATGGCAGGTAGATGTCATCTTTGATGGGCTCTGTCTTCTGTGTGAGTGCCCGTGGTTG----TGTGTGTGTGTGCGC
GCGCGCGTGTGAACTGCATTGCAGTGATG----------AGACCGGCAGGGTTTGAATAATAATGATAAAACAAATAACA
TCCGATGTGATGTGGTGTATGCTTGTCGTAGCTGGATGTATGTAACTCGTCCTGAACTTGTGTGTGGTTTGCAAATATCT
CGTGCTGAGCGTCCATGGGACCTAGGCT--TGCCACTTGTTTGTTG-------------------------------TCT
GCATCAATCGTTGC----CATAGGGTAAT-CAACAACAAAGAAACAGACCATTGTAGACACAAAAGCTCAAAAAACATTT
CAATGTCACATCGGGAAGGAAAAATTGTAGACAGAGA-GAAAATCTCAAGGGTTCGTTTGGTTTCCTCCTAAATTCCCGT
GGAGTAGCAAATTCCGTTGTTCCTCGGGGAATTTCAGAGAGAAGTAAGATGGTGATTCCGTTGTTCCAAACGGTGCCTAA
G-------------------------------------------------------------------------------
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------------------------------------------------------------------------------GA
ATATTTCCTATACAAATGATATCCGTCAGAAATTCCTATGTTTTTCCAGTTTTCCTTTGGATGTTCAAGAAAAGATTGGT
ACGCGAATCCTCGACG-AAAAAGAAACACGTCAATATATTGCAT-----GAAGAAACACACTCTTGATTACAATCACTGC
GACAAGATTACTGCCATACACTGTACGTCTGTACCAGCAGCAGAGTATGCAGTATAGGCAACGAAACAAGGACGGTCTGG
CACATACATTTATTCAGGTGC-AAGGGAGATGTAAAAAAAAAAGCTATCGAACAGGAGGCCAGAACTGAACTTCATACGC
GGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATCACCGTGGGGGCAGATCGGCCGGTGTACTCCTGGATCTTCGAAA
GCTTCAGGGCCACGTCAACCTGGATAAAAGAATAGAATCAGAACTGCATCCTCGCCAAAATGTTTCAGTGATTGTTACAG
GCATGAGAGGGTATACAGTACAGGGGAGTTG
>chr4D_6
-----TGGCACCCGGGCGGAGCGGCGGAGGTTTGGCAAGGCCTACGGGGCGGAGTGGGTGTTACAGCGACGGTGGCGGTC
AGACTAGGTGGCGGTCAGAGCAAGGGCAGGGGGTCGAAGAGAGAAAAGCGGGGCTCTAGGTGGGTTTTTGTGTGGGCGGA
GTGTGTCAGATGCCTACGTGGTGGCTATCCGGAGGTCCGCAAACCTCCTC---ATGTATGCTTCCGGTTTATGGGAATTC
AGGCGGTCAAACCGATTCAC---------AAACCTTTGATATATGACATTGAATGACACAAAATATCCGGATCCTAGACT
TTTGGCGACG-TTTTGATGATGAAGG--GCGTTGGAGATGCCCTAAGGGTATG-------CTAGAGTTGGCTGTCCATAT
CATCACGGACTCGTTAGGTGAATGTATTTTGTCGTCCACGAGGTAA----------------------------------
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-------------------------------------------------CGATGGCACGAGAGGAATGACACGACAGGCA
CAAAAGTATAGCTACTCATGTCCGAAACCATATGCCTCGAAGTCATGGTCAGGTTTGCTACTGCGATGGTCACTGAGTAG
CACAGTAGTCACTTTCCTACACATCCTGCAGGTGCCA-----CTCACGTCTCACTCACGACACCATCTAACTTTGACCGA
TCGGGAAGATCCGTCAGGTCAGTCAGTCCACTGGGATTCGCACGGATCGGACGCCGGGACAAGAGAACGTGAATTTGCCC
TTCACCACTT---------------------------TTCATGCATAAGCAAAGGACCCG-------TAGCCATAGCCAA
TTTCTCCTTCCCCGACCGAGCGAATGACACTTTTTAATTAAGTAAACTCGCACAACAGAAGAGCTGGTG------GTGGT
GTGCGGATCAGCGAAGCGCGG-----TTGTCCGTACGCATGG-------------------------------CGTCCCG
TGTACAGTAGAAAAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCAGCCGCCC
CGGATCCGTTTCCGTTTCCCCCCGCCCGCAAAGCCCACCAACCTTTCGGGGCCTCCTCCCC-GTCGCCACGCTACTTATA
GAGGGGCAGAGCCAGCTACGGCGACACACTCGACCCGACTCCTCTGCCCCGCATTTCCAAGA------------------
---ACACCTCTCCCTTCCCTTGCTCTGCCCTCTCCATCTCCATCTCCGGCTCCGG------------GAAGAAGAAGAAG
AGGTA-------GCCATGTCTCCGCTCGCCGACCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGA
GTACATATGGTAAGACCGCTCTGCTTCCTCATCCTCCCTCTTCCTCAGCACTGTCCCAAC-TCCCATCTCACCTTCCTTC
CGAACAAAATAATCCACTTCATCCATTCTTGCTGGTTCTTGTAATCTCAATTTTTAGTCCAGTAAAAACCCTTCTCTTCT
TGTTTTTTCCAAGTCAGGCAGGCAGGCCACAGATATTTTTTTTCCTCCCCATAAATCCCATCTGACGTTCCTTTCTAGTT
TAGTTTACTGGAATATATCATCGAAAAAAAAAAGTTTACATGAATATATACTAGTGTGTTTCTCTTCTTTTTTTTGCGAA
ACGTACTAGTGCGTTTCTCAAATTT-GAGTCCAGTAAAAAACCCTTTTCTTCTTGTTTTTTACGCCT------TGATCTG
TTGCCAATATGATGTTTTTTTTATTTTTTATTTTTTCTTTGGCAGACCGTTGACCCTGTGCATCTTAGCTATGCGTTG--
------CCGCTCATCATGATTTGTATTCGCCTCATTCT------------------------------------------
--------------------------------------------------AGTACATTATAAGTCAACAAAATGGGAAAA
TCGGCATCGTACTTTTAGGCCTTATTACTAACCTACTTCCATATAAAT-----CTTGCCTAATCCAGGGTCGGCGGCACA
GGGATGGACGTCAGGAGCAAAGCCAGGGTAAGCCTGCCTAACCCTCAATGACTCGTAGCTTTGCCGGCCGACTCCGTTTT
GTCTAGCTGTGACTGTGACGGCACTGCAAGTATGATATGTTCCTAACACTTCTTGTGACCCTTTTTGACGCCTTGGATAT
TCACAATCAGACGCTGCCCGGGCCCGTGGAGGACCCCAGCAAGCTTCCAAAATGGAATTTTGACGGCTCCAGCACCGGCC
AAGCCACGGGTGACGACAGCGAAGTCATCCTCTGGTAAGCCCTTGACTGCACCCTTCAGTTAAC---CATGCCTTGGCTT
GCGTGCCATGAGGCTGAGCTAATCTGAATTTCATGTGTTGCTCCTGCCAAGCCCTCAAGCCATCTTCAAGGACCCATTCA
GGAGGGGGAACAACATCCTGGTA----AGATCAAAGATCCT----CCTCTTTCTTTTTTCATGAATACCAGATTGTTGTT
CCACCTACAGTAATTTTTGTATTGTTGTGGCATCTGGCATGGATCTTTGTATTGTTGTTTATTTGTGTAAATGATTTCTC
AAAT-TTGTTCATGAATACCAGATTTTTTTAACATGA---TTTTTAACCT---TGTGTAGGTCATCTGTGACTGCTATGC
GCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCGGCGAGGATATTCGGCCATCCTGATGTCAAGGCTGAAG
AACCATGGTCAGTATATA-TCAGCTGCTCTCTCCTATAGAAATTAGTCGACTACTTTGATTTTTGCACATAATTTAATTT
AGGTGGCAATTAATCTTGTGCGCCCCTCTTGTGTTGCCTGAAATGTAAGGTATGGGATTGAGCAAGAGTACACCCTTCTT
CAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGTCCTCAGGTAACTTAACTAGACATGTTGCA
TATTGCAGCACTCTTATT------AAGTCTTAGCCAAGATCACTCCACTAAGTAAGGGAGGAAACTTGGCTGTAAATGAT
GT--TAGCTTAGCACTAACTGATAACAGTTCAAAAATGCTGGGCTGATGGTGACACTGACAGAGCAAAATGTGTGTGACA
GGGACCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGACATCGTCGACGCGCACTACAAGGCCTGCCTCT
ACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAGGTAGTTTCAGGCGCAGAAATACCTTCCCCT
T-----------TTCCTATCAAAATTGTTCATGGCCTGATTTCTGTCTGA----ACCAGTGGGAGTTCCAAGTCGGCCCT
TCCGTCGGCATCTCGGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATATAA--ACTGCCTCACCTAG
CTGAATGAATCAAATCAAATGCAGCTTTTGCTGATAAGAACATTTTTTGCTTTGTGTAACCCAACAGAGGATCACTGAGA
TTGCCGGTGTCGTCGTCTCCTTCGACCCCAAACCGATCCCGGTGAGCAT------TTCTTCTTCTTTTTGTGCCAGAAGT
GT-ACCTTGATCTGCACTGACCAGCTAGTCATTTCT-------------TACATGTGTGTGATTGCAGGGAGAGTGGAAT
GGTGCTGGTGCCCACACAAACTACAGGTAAGATATAACGAGCAAGCGAACGAATGCATCGCCGTCTAG-----TCTAGTC
TTGTGTTATGAGTTATGACATGTTCCTGCTGTGGTTTTCTGGATGCAGCACCAAGTCGATGAGGAGCGAGGGTGGGTACG
AGGTGATCAAGAAGGCGATCCAGAAGCTGGAGGCGCGGCACATGGAGCACATCGCCGCCTACGGGGAGGGCAACGAGCGC
CGGCTCACCGGCCGCCACGAGACCGCCGACATCAACACCTTCGTATGGGTAAGCAAGACTGAAGGCCTAGAAGCCCAACA
GCTTCAGACTC----CAGAGTCACTCACGCACTGACTGA------------------CTGCCTTGTTTGTTTTC------
CAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGAGAAGGAAGGCAAGGGCTACTTCGAGGACCG
GAGGCCGGCATCCAACATGGATCCCTACGTCGTCACCTCCATGATCGCCGAGACCACCATCCTCAGCAAGGCCGGTCTCT
CCAATGGCAAGTAGAGTGG--CTTTGATGGGTTCTGTTATCTGTGTGAGTGCCCGTGGTTGCGCATGTGTGTGTGTGTGT
GTGTCTGTG----------TGATCTGCATTGCAGTGACAAGACTGGCAGGGTTTGAATAATGATGATAAAGCAATAAC--
---ATGTAATG--------TGCTTGTCCTAGCTGGATGTATGTTCCTCGTCCTGAACTTGTTTGTGGTCTGCAAACATCT
CGTGTTATATAAGCGTGGGTTAT--GTTCATGGCACTAGGTTTGGCCGGGAAAGAGTCTCATCAATCACCCCCTACCTCT
GCGTCAATCGTTGC----CATAGGGTAATTCAACAAAAAAGAAAAGAAACTCAAAACTGTTGTCG------------TTG
CAATGTCGCATTGCGAAGGATAAACTGAAGAAATCA--------------------TTTGGTTTACTCCTAAATTTCGAT
GGAGTAGCCCATTCCATA--------GGGAATTTTGAAGGAAAGGAAGATAGTGATGTAAAATGTACTGCAGCTCTCGGG
TACCACACTCTCCTATATGAAAATAGCATTAAAAAGCATATCAGCAACTTTCAAAAAAATCTGAAATTCTGAGATATGAA
ACCTAAGTGCAGGTTGTACACCCGTGTTCATATTCACGGGGAATGGTTGCTTGTGATATCTGCGGCGCACGAACTACGGT
CCAACATATGTTACATTCAGGGTTTTTTCTATACATGCAATTTCTTTGTCTTTTTTACTAGCATTACCACGGGCATCCAT
TTCCCACGAAACTGAACACACGAGTACAACAATCAACCAAGTTTCATATCTCAAAATTTCAGAAATTTAATATGTTTTTT
AATGCTATTTTCATATAGGGTGTGTGACACGCAAGAGGATTTTTTATGTTATTTTCATATAGGGATATGTGACACCGAGA
GGATTCTTAATGCTATTTTCATATAGGGGTGTGTGACACCCAAGAGCCACAAATCCTCATCCAGATAGTGATTCCGTTGA
ATGTTTCCTATACGAATGATATCCTTCAGAAATTCCTATGTTT-TCCTGTTTTCCTTTGAATGTTCAAGATAAGATTGGT
ACGAGTCCTCGAT--GAAAAAAGAAACACGTCAATATATTGCATTGCACGAAGAAACGCACTCTTGATTACAATCACTGG
GACAAGATCAAGGCCATATA--------CTGTACCGGCAGCAGAGTA---AGTATAGGCAAAGAAACGGAGACGGTCTGG
CACATACATTTATTCAGGTGTAAATGGAGATGT--AAAAAAAGGCTATCGAACATGAGGCCTGAACTGAACTTCATGCGC
GGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATAACCGTGGGGGCGGATCGGCCGGTGTACTCCTTGATCTTTGAAA
ACTTCAGGGCCACATCAACCTGGATAAAAAGAAGTG-TCAGATCTGCATCCTCACCAAAATGTTTCGGTTATTTGTTAGA
AGCATGAG-----------------------
>chr4B_269
--------------------------------------------------------------------------------
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------------------------------ACCCTTTGATGTATGACATTGGATGACACAAAGAATCCAGACCCTAGACG
TTTGTCAGCA-TTTTGATGATGAAGGGCGCGTTGGAGATGCCCTAAGGGTCTGCAGTCTACTAGAGTTGGTTGTCCATTT
CCTAACGAACTCGTTAGGTGAATGTATTTTGTCGTCCACGAGGTAAGAGCAACTCCAATGGGGCAACCCATTTCATCCGC
ATGCGTCCGTTTGGGTCGGCGCGGACAAAAGTGCAGGCCCAACGCGGCGACCCAAACGCAAATCGCGTCCGCGCCGACCC
ATTTTCAGCCCAAAATTGCGTCTAGAATGCGTCGGCACGGATGCGAAGCATACGCGCCGCGCGTCTCATCGGCGTCTGCC
GCGTCCCCACCTGTAGGCCACCCAATCGCCACCGGTCGTCATATTTATGACGACCACCGACAGCGGGCCCACTTGTCAGC
CTCTGGAAGCTTCCTTTTTTAAGCACGCGTGCGACGGGTGGGCGGCCTCATCCAGTTCTCCTGTCCACATCTAGCCCCCC
ACCACTCCCTTGCTTCATCACCGGTGACAGGAAACCCTAGCCCGCCATGGGCTTCTTCGGCAACAATGACAAGGGCAAGG
GCAAGTGCACCCCCGGCATGTCGTCCTCCCGTGCTCCCCTCCCCCTCCTCCTCTGCCGGCGGCCCATTTACGCCCTGAAC
ATCGGCACCTGCACATCCCGGTGCACCAAGCACGGTGGCATTGGGAGTACAGGCAGCCCCTCCCCTACCCTGACGTGACG
CTGCCGCACCATTGGCACTTAGATCCCCAGCGGATCCCGGTGTCAGCGGTTCTGCGGAGCCAGCAGGCACACGACGACGA
GGTGCACCAGCGCCGCGCGCAGCTCACGCCGGAGCAGTGTCGGCTGCCTTGAGTACGTCGCCGACTCTCCCAACTGGGAG
GCTTGGTTCGCCCTCGAGCACGAGGAGCAACGGCGCTCGGGCGTCGACGCCGTCCCCACGTCGTTCCCGCTGCCGCCCTC
GAGGAGGCCCTGCAGCAGGCGCTGGAGGCTAGCCGCCTCAAGGAGGACGCGCGCTGGGATGGGCTGGAGCAAGCCCTCGC
CCTGTTGGCGGCGGGGGACTCCGTCCACACCCCGTTGTTCCAGCCGCCACCGCCACCGTCGCCGCCCATCCAGCCCAAGT
CGTAGCCGAAGCCGACGCGGAAGCGCTCCCCGTCTCCACCCACTTGGCCGGAGGAGGCCTACTCGGCCAGTACCGCGAGT
GTGTGAGCGCGCCCCCCGTCCACTTCGCCGCAACGCCGGAGCGGGAGGCCGCCCACCTCGAGCGCTGGAAGGCACACTGG
CTCGCCAGGAGCAGGCCGACGGCGAGCAGCAGATGCGCTACGAGGCCATGCTCCAGCGCGATGCGGAGGCGCTCCGGCTC
AAGGAGGAGGAGGAGGAGCGCGCGCGGCTAGCCGCAATGCCGCCGCCCCAGCAGACGCCGGAGGAGGTTGTCCTGGCAGC
ATACCCAGGCGGCGTTCGGGTGGGTAGGCCCTGCTCCCGTCTTCATCGACCTCACCGGCGATGGCGACGGCAGCGGCGCC
GCCAAGGGCAGCGTGCGGGGCGGCAGAAGGCGGCGCAGTCTTTTTTCTTAATGTTTTAATTATGTTTAAGTGGACTTTGG
CCGGCGACCGGCCACTTATGTTTTATTATGTTTATTTTAAGTTTATTTCGTGCAAGCATATTTTTTTGCATGCCATGCCG
GCACATTTGGGTCTGCCTCCCCGTTGGATGGTCAAGCCGACCCATTTTACAATACGGACGCGCACGTCCGCCTGACAAAA
ACGGACAAAACGCGTGCTGGTTTGGGTCGCCCCGTTGGAGTTGCTCTAACGATGTCACGAGGGGGATGACACGACAGGCA
CAACAACTTAGCTGCTCACACATGTCC----------CGAAGTCATGGTTAAATTTGCTACTGCGATGGTCACGGAGTAG
--CAGTGGTCGCTTTCCTACATAGAGTATCTTGCAGGTGTGGCTCACGTCTCACTCATGTCACCGTCTAGCTTTGACCCA
TCGGGTCA---------GTCAGTCAGTCCACAGGGATCCGCAC-----GGACGCCGGGACAAGAGAACGTGAATTTGCCC
TTCACCACTGGAGTAGTAGCACTGGCTAGCCAGCTGCTTCATGCATAAGCAAAGGGGAAGTCAGCCATAGCCATAGCCAA
TTTCTCCTTCCCCGACCGAGTGAATGGCACTTTCAGCAGGGCTTTCTTAATTTTAATTAATGAAGTGCTCCTGATGTGGT
GTGCGGATCAGCGAAGCGCGG-----TTGTCCGTACGCATGGCGTCCCGTGTACTG------------------------
-GTACAGTAGAAAAGGTGTTCCGTGCGCGCAGGCCGCGGAAACGTACGCACGCAAGGACAGCCGTACGTACCATCG----
-------GTTTCCGTTTCCCCCCGCCCGCAACGCCCACCAACCTTTCAGGGCCTCCTCCCCCGTCGCCACGCTACTTATA
GAGGGGCAGAGCCAGCTACGGCGGCACCACTCGGCTCGCTCCCCTGTCCCGCATTTCCCAGAGAGCTACCATTTGCCACT
ACAACACCTCTCCCTCT----------CCCTCTCCCTCTCCATCTCCGGTAGGCT---CCGGGGGAAGAAGAAGAACAGC
ACGCCGGCATCCGCCATGTCTCCGCTCGCCGACCTTCTCAGCCTCGACCTGTCCGGCTGCACCGGCAAGATCATCGCCGA
GTACATATGGTAACATC---------CCTCTTCCTCCATCTTCCTCAGCACTGTCCCAACCTCCCATCTCACCTTCCTTC
CA------------------------------------------------------------------------------
---------------AGTCAGGCAGGCCACATAT--TTTTT-TCCTCCCCACAAATCCCATCTCACGTTTCTTTCTAGTT
TAGTTTACTA----------------------------------------------------------------------
---TACTAGTGCGTTTCTCAAATTTTGAGCCCAGTAAAAACCCTTCTCTTG-----TTTTTAGGCCT------TGATCTG
TTGCCAATATGTTTTTTTTTTCTCTT----------TTTTTCTTT--GTTTGGCTATGTGCATCTTGGCTATGCCTTGGC
TAGGTGTTGCTGGTCATGATTTGTATCTGCATGATACTAGTACTTCCTCTGTA-AAGAAATATAAGAGTGTTTTGGTCTA
AATGATCTTTGATCTAAACGCTTTTATATTTTTGTAGGGGGGAGGGAGGGAGTACATTATAAGTTAATAAATTGGGGAAA
TCGGCATCGTACTTTTATGCCTTATTACTAACCTACTTCCATATACA-----CCTTGCCTAATCCAGGGTCGGCGGCACG
GGCATGGACGTCAGGAGCAAAGCCAGGGTAAGCCT----AACCCACGACGACTCATTACTTTGCCGGCCGGCTCCTTTTT
GTCTAAG-----CTGTGACGGCACTGCAAGCATGATATGTTCCTAACACTTCCTGTGACCC-TTTTGATGCCTTGGATAT
TCACAATCAGACGCTGCCCGGGCCCGTTGATGACCCCAGCAAGCTCCCAAAATGGAATTTCGACGGCTCCAGCACCGGCC
AGGCCACGGGCGACGACAGCGAGGTCATCCTCTGGTAAGCCCTTGACTGCACTCTTCACATAACCATCATGCCTTGGCTT
GCGTGCCTTGAGGCTGAGCTAATCTGAATTTCATGTCTTGCTCCTGCCAAGCCCTCAAGCCATCTTCAGGGACCCATTCA
GGAAGGGGAACAACATCCTGGTATATAAGAATGATCAAGAT----CCTCCTTGTTTTTTCATTCATGGAT----------
---------------------------------------------TTCGTGTTATTGTTTATTTGTGTTAATGAATTTTG
AAAAGTTGTTCATGAGTGCTTTTTCACCTCTAGTATTTTTTTTTAACCTCGCGCGTTTAGGTCATCTGTGACTGCTATGC
GCCTAACGGAGAGCCGATTCCGAGCAACAAGCGGTACAACGCGGCGAGGATATTCGGCCATCCCGAGGTCAAGGCTGAAG
AACCATGGTCGG----TACTCAGTTGCTCTGTTCTATAGAAATTAGTCCACTACTTTAATTTTTGCACATAATTTAATTC
ATGTGGCAATTAATCTTGTGACACCCCCTTATGTTGCCTGAAATGTAAGGTATGGGATTGAGCAAGAGTACACCCTTCTT
CAGAAGGACACCAACTGGCCCATTGGCTGGCCACTAGGGGGTTACCCTGGCCCTCAGGTAACTTAACTAGACATGCTGCA
TATTGCAGCACTCTTATTAAGAGCAAGTCTTAGCCAAGATCACTCCACTAAGTAAGGGAGGAAACTTGGCTGTAAATGAT
GT--TAGCTTAGCACTTGCTGACAACAGTTCAGAAATGTTGGACCGATAGTGACACTGGCAGAGCAAAATGTGTGTGACA
GGGACCTTACTACTGCGCCGCGGGTGCGGAGAAATCTTACGGGCGCGACATCGTCGATGCACACTACAAGGCCTGCCTCT
ACGCCGGCATCAACATCGGCGGCATCAATGCAGAAGTCATGCCAGGACAG------------------------------
-----------------------------------------------------------TGGGAGTTCCAAGTCGGCCCT
TCCGTCGGCATCTCGGCCGGCGACGAGCTCTGGGCGGCTCGCTACATCCTGGAGGTAAATG-AA--ACCGCCTCATCTGG
TTGAATGAATG-AATAAAATGCAACTTGTGCTGATAAGAAA--TTTTTCCTTTGTGTAACCCAATAGAGGATCACTGAGA
TTGCTGGCGTCGTCGTCTCCTTCGACCCCAAGCCGATCCCGGTGAGCAT---TTCTTCTTCTTCTTCTTGTGCCACAAGT
GTCACCTTGATCTGCCGTTCCACTGGCCAGCCAGCCATATGTAACTTTGCATATGTGTGTGACTGTAGGGAGAATGGAAT
GGTGCTGGTGCCCACACAAACTACAGGTAAGATAAAGAGAGCAAGCCAAGGGATGCATCGCCGTCTGCTATACTCTAGTC
TTGTGTTATGGGTTATGACATGATCCTGCTGATG---TCTGAATGCAGCACCAAGTCGATGAGGAGCGAGGGCGGGTACG
AGGTGATCAAGAAGGCGATCAAGAAGCTCGAGGCGCGGCACATGGAGCACATCGCCGCCTACGGTGAGGGCAACGAGCGC
CGGCTCACCGGCCGCCATGAGACCGCCGACATCAACACCTTCGTATGGGTAAGTAGGAAAGCCCCACGGGGAG-------
--TTCAGAGTT----CAGAGTCACCACCATTGCTGCTCTTCTCTGACTGCTTTCCGGCTGCATTGTTTGTTTGTTTTTTG
CAGGGCGTGGCGAACCGCGGCGCGTCGGTGCGGGTGGGCCGCGACACCGAGAAGGAAGGCAAGGGCTACTTCGAGGACCG
GAGGCCGGGGTCCAACATGGATCCCTACGTCGTCACCTCCCTGATCGCCGAGACCACCATCCTCTGCAAGGCCGGCCTCT
CCAATGGCAAGTAGATGTCATCTTTGATGGGTTCTGTCTTCTGTGTGAGTGCCCGTGGTTG----TGTGTGTGTGTGTGT
GTGTGTGTG----------TGCAGTGATG----------AGACTGGCAGGGTTTGAATAATGATGATAAAGCAATAACAT
GTAATGTAATG--------TGCTTGT-GTGGCTGGATGTATGTTCCTCGTCCTGAACTTGCCTGTGGCCTGCAAACATCT
CGTGTTAAGCGTTCATGGCACCCAAGTTCATGGCACTTATTTGTGG-------------------------------TCT
GCATCAATCGTTGCAATGCATAGGGTAAT-CAACAACAACAACAAAAAACTCAAAA------TCG------------TTT
CAATCTCACATTGGTAAGAAAAAGTTGTAGACAGAGAAGAAAACATCAAGGGCTCATTTGGCTTACTCCAAATTTTCGAT
AGAATAGCCCATTCCATA--------GGGAA-TTCAAAGGAAAGTAAGACGGTGATTCCGTTCTTCCTAACGGTACCAAA
G-------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------------------GA
ATATTTCCTATGCGAACAATATCCTTCAGAAATTCCTA---------TGTTTTCCTTTGGATGTTCAAGATAAGATTGGT
ACACGAGTACTCAACGAAAAAAGTAACACGTCAATATATTGCATTGCACGAAGAA--ACACTCTTGATTACAATCACTGG
GACAAGATCACGGCCATATA--------CTGTACCGGCAGCAGAGTA---AGTACAGGCAACGAAACGGAGACGGTCTGG
CACATACATTTATTCAGGTGTGAAGGGAGATGT--AAGAAAAGGCTATCGAACATGAGGCCAGAAATGAACTTCATACGC
GGCCTCGGCGCATATCTAGGTCAAAATTTATGTGATCACGGTGGGGGCGGATCGGCCGGTGTACTCCTTGATCTTTGAAA
ACTTCAGGGCCACATCAACCTGGATAAAAAGAAGTG-TCAGATCTGCATCCTCGCCAAAATGTTTTGGTTATTTGTTAGA
AGCATGAG-----------------------
>SNPs
SSSSS--------------------------------------SS-S-----------------S-----------S-SS
S-----SSS-SS---------------SS-------S--------S--------------S----------------SSS
-------------S-S--------S-S-----------------------SSS----------S----------------
S-S---S---S---------SSSSSSSSS--------------------S-------------------S----------
----------S---------------------------S--------S--------------------------S-----
-----S------------------------------------S---S---------------------------------
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-----------------------------------------------------------------SS-S----SSS--S-
S-----S--S------SS---S-SS-SSS-------------------------------------------------S-
---S---------------------S--------S--------------------------------------------S
---------------S----------------------S----S-SS-------S-------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------SSSSS----------------SS--SSS-SSSS-SSSSSSSSSSSSSSSSSS-------
--S-----S-------S--S------------------------------------------------------------
---------------------------------------------------S-SSSSS-S--------------------
-------------------------------------------------------S----S-------------------
-----------------S--------------------S--SS----SS------SSS----------------------
SS---------------------------S--S-----------------------------------------------
-----------------------------------------------------------------------S--------
--------------------------------------------------------------------------------
------------------S----------------------S--------------------------------------
-------S-S----------------------------------------------------------------------
-----------S--------------------S---------------S-S-------S--SSSS--SSSSSS-------
-----------S-------S---------------------S---------------S----------------------
SS------------------S-S--S---------S--S------S-------S--S-----------------------
----------------------S--------S-S--S-SSS----------------S----------------------
------------------------S----SSS-------S--S----SSSSS-----------S---------------S
--------------------------------------------------------------------------------
---S-------------------------S----S-SSSSSS--------------------------------------
---------------------S-----S----------------------------------------------------
-----------------------------------------------------------------S--------------
--------------------S---------------------S--S-----------S-----------------S----
-----------------------------------------SSSS---S---S---SS-----SS-SS-SS--S------
--------------------------------------------------------------------S-----------
-----------------------------S-S---S---S----------------------------------------
------------------------------------------S-----------------S-------------S-----
-----------------------------------S----------------SS---------------------S----
----------------------------------------------------------------S---------------
-----------------------------------------------------------------------------S--
--S-----------------------------S--------S----S----SS-------------------------S-
S-SS----------------------------------------------------------------------------
--------------------S------S----------------------------------------------------
------------------------------------------------------------------S---------S-S-
SSSSSSSSSSSS----------------------S---------S-----SSSS-------------------S------
--------------S----------------------------------------------S--SS--------------
-SS----------------------S---SS-S---------S------S------------------------------
-------------------------------------------------SSS--------------------------S-
S---S--S-----------S---------------S----------S---------------------------------
----------------------------------S------S-----------------S--------------------
------S----------------------S--------------------------------------------------
----------------------------------------------S-----------------S-----------S---
--------------------------------------------S----------S------------------------
---S-------SSSS-----------------------------S-----------------------------------
--------------------------------------------------S--------------S--------------
---------------------------------------------------S--------------S--S----------
---------S---------------------S---------------------------------------------S-S
-S-S-S---SSSSSSSSSS------------------------S-----------------S--------S---SS-SSS
SSSSSSSSSSSSSSSSSSS------------------------SS----------------S------S------S----
----S-S-----S-----------S-S-----S-----------S-----------------------------------
--------------------------------------------S-S-S-SSSSS-SSSSSSSSSSSSSSSSSSSSS---
-----------S-------------------------------SS-------S--S--------S----------S-SS-
--------SS-----S-SSSSSSSSS----------S--SS---------------------S----S------S--S--
--------------------------------------------------------------------------------
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-------------S----------S------------------S---S----------------------S---------
------S-S---S------------------------------------------------------------------S
--------S--S------S-SSSSSSSS-------S-----------SSS-----------------SSS----------
--------------------S------------SS-------S-----------S-------------------------
------------------------------------------------S-------------------S------S----
S------------S---------------SS-SSSSS-----S-----------------------S--S---SS-SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_359
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-------------------TGATGAAGGGCGTTGGAGAC-----------------------------------------
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>reverse_3522
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-GGGTGCCGCTCATCATGATA-----------------------------------------------------------
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>forward_2613
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---------------------------------TACGCATGGGATCGAATCGG---------------------------
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>reverse_4908
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---------------------------AGAGAAATCTTACGGGCGCG---------------------------------
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>forward_3541
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-GGGTGCCGCTCATCATGATA-----------------------------------------------------------
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>reverse_5361
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TTCAGCTCGATCTGCCGTTT------------------------------------------------------------
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>forward_5051
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-----------------------------------------------------------------------CCTTCACTT
GGATGCCCCTT---------------------------------------------------------------------
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>reverse_7270
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---------------------------------------------------------------------GGACGGTCTGG
CACATACAT-----------------------------------------------------------------------
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-------------------------------
