>input_sequence_29221
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-------------ATCCACCACAGACAAGATTAGGTAGGTAGATAGATAGCTAGGATGCAGCAGCAGGCAAGGGCAAGGG
CAGCGGCAGGGGAGGACAGCAGCAGCAGCAGCCT---GCACACGGTGAACGCGGCCGCCGTCGTTCTGGCCGCCGCCGCG
CAGAGCAGCACCGGCCTCGGCCTGCGCCCCAACCACCATCATCTCCACGACCACGACCACGACCT------CTCCGCCGC
CGCTACGGTACGTCCGTCCTCCTGCTTGCTTGCTTGGGTCGATCCCTTGAGG---CCTTCACGCGTGAAGGTACCCCAGC
TTGGTTCTTTCATCTTAGTTTGAATTGACTACTAGTGTGCGTTAGCAAGTACGTAGTAGCAGAAGCGTCCGGTCTGGTGG
GTCAGTGCCTACCATCCATCCATCTATCCATCATGTCAGCCTAACGTACGTACCCTACCATCCATCCATCTATCCATCAT
GTCAGCCTAACGTACGTACGGTTGTGTTGTGTGTTGGCTTGG-------CCTTGGCATATCTTAGCCTAGCCGCACGTGC
TGAATGAATGAATGAAACTGCCTGGTTCCGGGGA---------GTAGTTGTAAATGTCTCATGTAC----CCATCCATCC
ATCCACAGTTTACTTTGACCTTTGATAGTACATCAA--------AATGTGTTGCAATCTCCA-----TGGCGCCAAAAGT
CACCCACTCTTA---CCTCCACCACTCATCA------CAAATACGCACGCATGGCAATTGGCAATGGCAATGGCAATGCC
ATGATGAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------GCCACTA-----TGGAAATTACTTACATGCCTCAGGTCATAGATGTTAGG
CTTAGCTGCGAGGTCTGTGATATTAGGCCCTGGATTATCAGCATTCCTTCATCAACTGGACATGAATAAAGACAGATGTT
GCGTAGACGATGGCTTCAGACTTACTGATGTATTCGTTTATAAGGTCTTTTGTGAATAACTAATAAAGTGGCTGCATGCA
TCGGCCAGATGCAGAGGCCGGAGGTCTTCCTCCTTAAAAAAAGACACACAGAGAGAGAGAGCGCATCTTGCTCAATTCTT
CACATGCATGTCTGCCAAACTAATCAACCACGTGTTTTTTTTGGGAGTGGCTGGACGTCAGTCAACTTGGGATGCAAAAT
CAACGGCCCCAGTCTTTTCTTCAACCTCCCGCACATCTACTTCCTTCCTGCCCTCTCCGGAACCACTCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACACCATTGTCCCCATCCTGAACCTTAAGAAAGACACTGGGGTGA
TGACGGGGGCCCCTTCCTTCTCTCTGGCGAGGCACTTCATTCGTTCAAAAATTGGCTGACCTCGAATTCGAAAATCAGCC
GACTGATATGTAGTTAAACTGGTTTATTTTGCACCCAACTCAATAATTCATTAATTCAGTTGTTCACATTGCTTTGCCTC
ACGACTGAAAAAGATCAACTGTCTGACTGACAGAGA--------------TGTTTTGCTT--------------TGCTTT
----TGCAGAAGAAACGGTGGTGGTCGCGGCTGTCGTCCACGCTCTGCTTCCGCCCGCACTTCCACGCCCACCCGCGCCG
CGTCATCGCCGCAGCCTACGCCGACGACGGGGACACACCGCCACGCCCGCTCGCCGCAGCATCCCACACAGCATCGGCGT
CGGCCTACGTGCACCAGGCCCCGCCTGCCCACCCGGTCTTCGCCTTCGCCGCGCCGCCCTCGTCGCCGGCCTCCTCGCTC
TTCCAGTCGGAGGCGCCCTCACCAGTCCTCCTGGACCTCCACGGGACCGCGGGCAGCTCGCCCGGCATGTTCGCCGTGGG
GCCCTACGCGCGCGGGCCGCAGCAGCTGGTGTCGCCGCCGGTGCTCTACTCCGCGCTCACCACCGAGCCCTCCACCGCGC
CGCGCACGCCCCCTGCCACCACGGGGCCGTCCTCCCCCGAGGTCCCCTTCGCGCGCTT---CGTCGACGACGGAGGCCAC
GAGCTGCTGTTCCACCACGCGGCCTACCAGCTGCGGCAGCAGGGCAG------ACCCCTCGTCTCGCCGGGACCGGAGCC
GGGGTCCCCTTCCTCGTCGCCGCGGCTGTTCCGGAAGCTGCACCGGCGCAGCGAGCAGGGCTCGCTTCTCGACGGCCACG
TCCCCGTCGCCTCCTTGTGTCAAGGCGCCGACGCCAGGGGCATAGACGATGATGATGAGGAGGAGGAGGAGGTGCCCGAT
AGCGCCGGGGAGTTCGTGTTCGGCAATGCCGACGGCCGTGGCGCCGCGCCGGAGGAGGAGATAGTAGAAGGCAAGAACTG
GCATTTCTTCCCCATGGCCACGGGTGAGCAGCACCCTAATAAGATACTATGAGCCCAATACCTCTGCTCCGTCTCACCAT
CAACTAGGAAACGATTCTGACAGTGTATGTAGTTCATCAGCCTTCTTCAGCAACACAAAACAGATGTAGGAAGAAAACAC
AGACTGGTACCAAAGTTTCGACTA--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr4A_1_TraesCS4A01G312100
TCCCTTAAATGTACGCGGACTAGTCTCCATGTCTCAACTTGGGTACATTGATTGCAAACTTGAAAAATGTTTTACGGGTG
TATGGATATCCGCATGTCCAACCAAAAGCAGCCATGTGGGCCCCATATCTCCTCCCGGCCACACACGCACATAAAAAAAG
CAACCACGTGAGCCCCGCTTTCCTTTCTCCCTCCTCCTCCTCCTCCTCCTCCTAGCCAGACAAATGAAGAATATTTTAGG
ATGGCTGCCTTCCCTATCTTGTCCGCGGACATGTCTTGGATGTGTCGACGGACATTTTTACGATGTACATTTGAAGGGCT
TGTATTGAAGATGCCCTCATAGCCCATCTTGAAGTTGTCCCGACATATGTGGGCGGTTTAAGAGTCGGCATTGGAGATGC
CCCAAGTGCAGTAGTGAAGGATGGTACTAGTGTTTTGG-GATTTGTGGTGCAGGCCGGCTGTTGTGTTAATTTTTGGGAG
CACATGAGACATGAGGAGTGGGTTGGAAGCATAGATACATAGACTAGACAGGGCAA------------TGCATAGTAG--
--TAGTGGATGGTGCGTGAGATAGATATAGATAAGC-GATATGCGTGAGGGTGC------------GTCATTGTCATGGT
GCACGAGCGTGCGCGCTTGGCTCCTTCTACCTTTGCC-----AATTGATTGACTCGATCAAACAAACCGTCTCTGTCTCC
GTCGATGGCGATGGCGATGGCTGCCCCGCTCCACACGTCGAAATGGGGACGAGAAAGAAGAAGAA---GAAGAAGAGAAC
GCGTTCCTTCCACCTTG---CTTCATCTCTTTATATATATCTTTTCCTTTCTTTCTT--------CACCATTTAGGCGAG
GTGAGGGAGCTACTTTACTAACTTCATTGTCAATAGCTAGCAGGCTCTTCTTCTTCTTCTTCTTCCTCCTGCTCCTGCTC
CTCCTCCTCCTTGAGCAGGCC---TCTGTTGCCATGCGTGCATGACAAATTGATTAGCTATATACTTAGTTGGT-CCCTA
CCCATACAGATCCATCCACCACAGACAAGATTAGGTAGGTAGATAGATAGCTAGGATGCAGCAGCAGGCAAGGGCAAGGG
CAGCGGCAGGGGAGGACAGCAGCAGCAGCAGCCT---GCACACGGTGAACGCGGCCGCCGTCGTTCTGGCCGCCGCCGCG
CAGAGCAGCACCGGCCTCGGCCTGCGCCCCAACCACCATCATCTCCACGACCACGACCACGACCT------CTCCGCCGC
CGCTACGGTACGTCCGTCCTCCTGCTTGCTTGCTTGGGTCGATCCCTTGAGG---CCTTCACGCGTGAAGGTACCCCAGC
TTGGTTCTTTCATCTTAGTTTGAATTGACTACTAGTGTGCGTTAGCAAGTACGTAGTAGCAGAAGCGTCCGGTCTGGTGG
GTCAGTGCCTACCATCCATCCATCTATCCATCATGTCAGCCTAACGTACGTACCCTACCATCCATCCATCTATCCATCAT
GTCAGCCTAACGTACGTACGGTTGTGTTGTGTGTTGGCTTGG-------CCTTGGCATATCTTAGCCTAGCCGCACGTGC
TGAATGAATGAATGAAACTGCCTGGTTCCGGGGA---------GTAGTTGTAAATGTCTCATGTAC----CCATCCATCC
ATCCACAGTTTACTTTGACCTTTGATAGTACATCAA--------AATGTGTTGCAATCTCCA-----TGGCGCCAAAAGT
CACCCACTCTTA---CCTCCACCACTCATCA------CAAATACGCACGCATGGCAATTGGCAATGGCAATGGCAATGCC
ATGATGAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------GCCACTA-----TGGAAATTACTTACATGCCTCAGGTCATAGATGTTAGG
CTTAGCTGCGAGGTCTGTGATATTAGGCCCTGGATTATCAGCATTCCTTCATCAACTGGACATGAATAAAGACAGATGTT
GCGTAGACGATGGCTTCAGACTTACTGATGTATTCGTTTATAAGGTCTTTTGTGAATAACTAATAAAGTGGCTGCATGCA
TCGGCCAGATGCAGAGGCCGGAGGTCTTCCTCCTTAAAAAAAGACACACAGAGAGAGAGAGCGCATCTTGCTCAATTCTT
CACATGCATGTCTGCCAAACTAATCAACCACGTGTTTTTTTTGGGAGTGGCTGGACGTCAGTCAACTTGGGATGCAAAAT
CAACGGCCCCAGTCTTTTCTTCAACCTCCCGCACATCTACTTCCTTCCTGCCCTCTCCGGAACCACTCCCNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTACACCATTGTCCCCATCCTGAACCTTAAGAAAGACACTGGGGTGA
TGACGGGGGCCCCTTCCTTCTCTCTGGCGAGGCACTTCATTCGTTCAAAAATTGGCTGACCTCGAATTCGAAAATCAGCC
GACTGATATGTAGTTAAACTGGTTTATTTTGCACCCAACTCAATAATTCATTAATTCAGTTGTTCACATTGCTTTGCCTC
ACGACTGAAAAAGATCAACTGTCTGACTGACAGAGA--------------TGTTTTGCTT--------------TGCTTT
----TGCAGAAGAAACGGTGGTGGTCGCGGCTGTCGTCCACGCTCTGCTTCCGCCCGCACTTCCACGCCCACCCGCGCCG
CGTCATCGCCGCAGCCTACGCCGACGACGGGGACACACCGCCACGCCCGCTCGCCGCAGCATCCCACACAGCATCGGCGT
CGGCCTACGTGCACCAGGCCCCGCCTGCCCACCCGGTCTTCGCCTTCGCCGCGCCGCCCTCGTCGCCGGCCTCCTCGCTC
TTCCAGTCGGAGGCGCCCTCACCAGTCCTCCTGGACCTCCACGGGACCGCGGGCAGCTCGCCCGGCATGTTCGCCGTGGG
GCCCTACGCGCGCGGGCCGCAGCAGCTGGTGTCGCCGCCGGTGCTCTACTCCGCGCTCACCACCGAGCCCTCCACCGCGC
CGCGCACGCCCCCTGCCACCACGGGGCCGTCCTCCCCCGAGGTCCCCTTCGCGCGCTT---CGTCGACGACGGAGGCCAC
GAGCTGCTGTTCCACCACGCGGCCTACCAGCTGCGGCAGCAGGGCAG------ACCCCTCGTCTCGCCGGGACCGGAGCC
GGGGTCCCCTTCCTCGTCGCCGCGGCTGTTCCGGAAGCTGCACCGGCGCAGCGAGCAGGGCTCGCTTCTCGACGGCCACG
TCCCCGTCGCCTCCTTGTGTCAAGGCGCCGACGCCAGGGGCATAGACGATGATGATGAGGAGGAGGAGGAGGTGCCCGAT
AGCGCCGGGGAGTTCGTGTTCGGCAATGCCGACGGCCGTGGCGCCGCGCCGGAGGAGGAGATAGTAGAAGGCAAGAACTG
GCATTTCTTCCCCATGGCCACGGGTGAGCAGCACCCTAATAAGATACTATGAGCCCAATACCTCTGCTCCGTCTCACCAT
CAACTAGGAAACGATTCTGACAGTGTATGTAGTTCATCAGCCTTCTTCAGCAACACAAAACAGATGTAGGAAGAAAACAC
AGACTGGTACCAAAGTTTCGACTACACAATTTCTGTGCATGTATGTATACAAGCTA-AACTTTGATGGATAATCCTGGTG
ACAAGAAGCTAACTAATGTTGGTCATCCCCCTAGTGATCTAAACGCTCTTATATTTCTTTAAGGAGGAACTACTTCGGTC
TCTAATTGTGGTTTGTCGAATTCCCATGCACCTCTCTTCTACTCCCTCCGTTCCAAATTACTCGTTGCAGAAATGAATGT
ATCTAGAACTAAAATACATCTAGATACATCCATACCTGCAACAAGTAATTTAGAACGGAGGGGGTATCCAGTAAGATTTA
AATTTGATTAGCTCAGTTAGATTTTTGATTTGAGTCTAGCTAAAAGAATATCTACGTAAGTAGAGAAGAACCGGTCCCAT
CCCAGATATGTTAAAA---AAAACACTAATGATCACGAAAGATGGGGAACTGGCCAGAATGAGAGCCAACACACTATCGA
TCAGTGGCGAATCTAAGAGGGGGTGGGGGTGTGCTTCAATCCCCGCCAAAAATTGAAAAGAAAAATATACTTGTATTCAA
CCTAGCCTTGTATCAAAATTTAACCTTATTTGAACTAAAAAACTGAGAGTTGATGGTTTTCTTTCACACGGTTAACTTTG
AGCCCCCACTCTCCTTCATTTTCTTTCAAGATTCGCCATTGCTATCGATAACACAGAAATGGTATCCACGTTCCAAAATA
TTACCATTCATGAAGAAGAACCGGAAGAGTGTACAGCGGTGTACTCCTTTTCTTTTTTGTAATTTTTCTTATCGTTTCGT
AATTGCCTTTTCCTTTTGTAATCTAGAGTGTGGCTTTGTACTCCTTTTCCTTCCCGATGATTAAGGGTCTTCACAAGGTA
GCTACTAATAAAGCTCAAAATTGATCCCATATGGCACTTTGCCTCTTTTTTAAGTTTTTTTCTTTCAATTTATCAAAATT
TTATGAATTTTTAAAGTAATTGGGCAAAAAAAGGCCCACGGTCCTTATGGGTCGTGGGTCAGACCTTT
>chr4D_400
CCCCTA--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----AGTGCAATAGTGAAGGATGGTACTAGTGTTTTTGCGATTTGTGGTGCAGACCGGCTATTGTGCTAATTTTTGGGAG
CACATAAGACATGCGGAGTGGGTTGGAAGCATAGATACATAGACTAGACAGGGCAATGGCAATGCAAGTGCATAGGAG--
--TAGTGGATGGTGCGTGAGATAGGT--AGATAAGC-AATATGTGT------GC------------GTCATTGTCATGGT
GCACGAGCGTGCGCGCTTGGCTCC-TCTACCTTTGCC-----AATTGATTGACTCGATCAAACAAACCGTCTCTGTCTCT
GTCGATGGCGATGGCGATGGCTGCCCCGCTCCACACGTCGAAATGGGGACGAGAAAGAAGAAGAAGAAGAAGAAGAGAAC
GCGTTCCTTCCACCTTG---ATTCATCTCTT--TATATATCTTTTCCTTTCTTTCTTTCTTCCTTCACCATTTAGGTGAG
G-----GAGCTACTTTACTCACTTCATTGTCAATAGCTAGCAAGCTCTTCTTCTTCTTCT--------------------
-TCCTCCTCCTCCAGCAGGCC---TCTGTTGCCGTGCGTGCATCACAAACTGATTAGCTATATACTTAGTTGGCT-----
CCCATACAGATCCATCCACCACAGAAAAGATTAGGACC------AGATAGCTAGGATGCAACA---------GGCAAGGG
CAGCGGCAGGGGAGGACAGCAGCAGCAGCAGCAGCGCGCACACGGTGAACGCAGCCGCCGTCGTTCTGGCCGCCGCCGCG
CGGAGCAGCGACGGCCTGCGCCCCCAGCTCCACCACCACCATCTCCACGGCCACGACCACGACC------CCTCCGCCGC
CGCTACGGTACGTACCTCGTCCTGCTTGCTT----GGTTCGATCCCTTCCCCTTCACAACAAGATGTATTCT---CCAGC
TTGCTTCCTTCATCTTG--------------CTAGTGCGCGTTAGCAACTA-GTAGTAGCAGAAGCGTCTGGTCTGGTGG
GTCAGTGCCTACCATCAATCCATC-------CATGTCAGCCTAACGTACGTACTCC------------------------
------------TACGTACGGTTGTGTGTTGGCTTGGCTTGG-------CCTG------TCTTAGCTTAGCCGCACGTGC
TGAATGAAAGAA----ACTGCCTGGTCATGTCTT------------GTTACAAATCTCTCATGTACTCATCCATCCATCC
ACCCACAGTTTACTTTGACCTTTGATA---------------------------------CA-----TGGCGCGAAAAGT
CACTCACTCTTA---CCTCCACCACTCATCT------CAAATACGCACGCATGTCAATTGCCAATGCCATTTTTTTTTTT
GAAAGGAGGATATAACCCCGGCCTCTGCATCTAAGTGATGCATGCAGCCATTTTATTAATTATTCATAAAGACCTTGCAA
AATAATACATCATTAAGTCTGAAGCAACCATCTCGGCAACACATGTCGCTACTCCTATTCCCTTGATGAAGGGGTGCCGA
ATATCCGAGCCGAATACACCAAACGAACATCGCACCAAAGCCTAACATCTAAAGCCGGATGACCCAGCCCAGCCAGATAC
CAGGACTGTGTCACACACCGGCTCGGCGCACTCTTAGAAGCCGTCGCCGCCGTTTTCCACCGATCCATCTCCAGGGCAGT
TACCGACGCACCGACCTTGCCAGGCCTGCCGTCAATGCCACCACGGTGCCAGACAGTGCCACCATCCTGCATGTATCCAT
CTGCCTGCGCCCGTCGCCGAACCTCCGCAGCGCCATGCCGCCAGGATCCGCCGTCAGCCTTGCGGTAGAGGGAATACCGC
TCCTCCTATAGTCCTCTCCATCCAGCACTTGCTCGAAGACGATGCCCCCAGGAGGGAAAACAACACCAAAGGCGCCGTCA
TCGTCCGATCCGGGAGACCCAGATCTAGGGTTTTCCCCGAAGCATCCCGACCCTGATGACGCAAACTGCAACGCCGATGC
CTCAACAGGGAAACGGCATCGGAGACGCCGCCATCGTCTGCCATGAACGAAGTCAGCGCGATTTTCATCGGCAGTCGCAC
CACCAGGGCGTGCGCCGCCGGCGTCACTGGTTCCTTCAACCTGAGCAAACTCCAAAGGCGATGCCCTTAAGAGGGACTAC
GACGCAAAAGCATCATCATCGCTCGATCCGATGCTGGCCGGGCGAGGCGGCGAGGAGGAAGGGAGGCGGGGAAGAGGCGC
TGCGGGCGGCGGCTAGGGCTTCGCCCTGCCGCCCGCGAGAGCGGCTTGGGCGAACCAGTACCAACTTCAACTTGGTACGA
CGGGTTTCCTTGCTCTCGAAGCGATGATTAGGCACTG-----TAGAAATTAGTTACACGGCAAATCGATTCAATTC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------GCTCGTGCCAACACACTGATCGAGCGTCTTGTTC-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACTTACTGTGTCAATTTATTTGGAAGAATATTCAAGTGACTAACAGGGATGTTTT
GCTTTGCAGAAGAAACGGTGGTGGTCGCGGCTGTCGTCCACGCTCTGCTTCCGCCCGCACTTCCACGCCCACCCGCGCCG
CGTCATCGCCGATGCCTA---CGCAGACGGAGACACGCCGCCACGCCCGCTCGCCGCAGCATCCCACACGGCATCAGCAT
CGGCTTACGTCCACCAGGCCCCGCCTGCCCACCCGGTCTTCGCCTTCGCCGCGCCGCCCTCGTCGCCGGCCTCCTCGCTC
TTCCAGTCGGAGGCGCCATCACCGGTCCTCCTCGACCTCCACGGCACCGCCGGCAGCTCGCCCGGCATGTTCGCCGTGGG
GCCCTACGCGCGCGGGCCGCAGCAGCTGGTGTCGCCCCCCGTGCTCTACTCCGCGCTCACCACCGAGCCCTCCACCGCGC
CGCGCACGCCCCCGGCCACCACGGGCCCCTCCTCCCCCGAGGTCCCCTTCGCGCGCTT---CGTCGACGACGGCGGGCAC
GAGCTGCTGTTCCACCACGCCGCGTACCAGCTGCGGCAGCAGGGGAG------ACCCCTCGTCTCG------CCGGAGCC
GGGGTCCCCTTC---GTCGCCGAGGCTGTTCCGGAAGCTGCACCGGCGCAGCCAGCAGGGCTCGCTTCTCGACGGCCACG
TCCCCGTCGCCTCCTCGCGTGAGGGCGCCGACGCCAGGGACGTAGACGATGAGGAGGAGGAGGAC---GAGGTGCCCGAT
AGCGCCGGGGAGTTCGTGTTCGGCCATGCCGACGACCGTGGCGCCGCGCCGGAGGAGGACATAGAC---GGCAAGAACTG
GCATTTCTTCCCCATGGCCACGGGTGAGCAGCACGCTAA-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------
>chr4B_481
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-ACATGAGACATGAGGAGTGGATTGTAACCATACATAGATCCA--AGGCAAGGCAA------------TGCAATGCAATG
CATAGTGGGTGATGCGTGAGATAGAT--GGATAGAAGGATATGCGTGCGGGTGCGGGTGCGTGTGGGTCGTTGTCATGGT
GCACGAGCGTGCGCGCTTGGCTCC-TTCACCTTTGCCAATTGAATTGATTGACTTGATCAAACAAACTCTCTCTGTCGT-
-----TGGCGATGGCGATGGCTGCCCCGCTCCACACGTCGACCTGAATGG--------AGAAGAGAAAGAAGAAGAGAAC
GCGTTCCTTCCACCTAGCCAATTCATCTCTA--TA--------------TCTTTCTTCCTTCCTTCACCATTGAGGTGAG
GTGAGGGAGCTACTTTACTCACTTCCTTGTCAATAACTAGCTAGCAAGC-----TCTTCT--------------------
-TCTTCCTCCTCCAGCAGGCCTGATCTGTTGCCATGCGTGCATCACAAATTGATTAGCTA----CTTAGTTGGTTCCCTA
CCCATACAGATCCATCCACCACAGACAAGATTAGGTAGGTAGATAGATAGCTAGGATGCAGCAGCAGGCAAGGGCAGGGG
AGGAG------------------AGCAGCAGCGT---GCACACGGTGAACGCGGCCGCCGTGGTTCTGGCCGCGGCCGCG
CAGAGCAGCACCGGCCTGCGCCCCCA---CCACCACCACCATCTCCACGACCACGACCACGACCACGACACCTCCGCCGC
CGCTACGGTACGTCCGTCGTCCTGCTTGCTTGCTTGGGTCGATCCCTTCCCCTTCCCTTGACGCGTGAGGAACAAGCGGT
CGGTCACTGCGT--------------------------------------------------------------------
--------------------------------------------------------------------------------
---------ACGTACGTACGGTTGTGTGTTGGCTTGGCCCTGTCCTACTCCTA------TCTTAGCTTAGCCGCACGTGC
TGAATGAATGAACGAAACTGCCTGGTCATGTCTTGTTACTACTGTAGCTGTAAATGTT---------------TCCATCC
ATCCACAGTTTACTTTGACCTTTCCATCCATTCATGTCAATGTCAATGTGTTGCCATCTTGTCTTGTTGGCGCCAAAAGT
CACGCACTCTTCTTGCCTCCACCGCTCATCTCAAACCCAAATAGTCACGCATGGCAA-TGGCAATGGCAATGGCAATGCC
ATGATGAT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------GCCACTAACTCGTGGAAATTAGTACTATACATATTCCGATCTAGTGCA--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------TC
CACATGCGTGTTTGTGCAACCAGACACATCTGTTGTGATTTTA-------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------ACTGACAGAGATGTGGCTGCTGCTCTGTTTTGCTT--------------TGCTTT
GCTTTGCAGAAGAAACGATGGTGGTCGCGGCTGTCGTCCACGCTCTGCTTCCGCCCGCACTTCCACGCCAACCCGCGCCG
CGTCATCGCCG---CCTA---CGCCGACGGCGACACGCCGCCACGCCCGCCCGCCACAGCATCCCACACGGCATCAGCAT
CGGCGTACGTGCACCAGGCCCCGCCTGCCCACCCGGTCTTCGCCTTCGCGGCGCCGCCCTCGTCGCCGGCCTCCTCGCTC
TTCCAGTCGGAGGCGCCCTCACCGGTCCTCCTGGACCTCCACGGCACGGCCGGCAGCTCGCCCGGCATGTTCGCCGTGGG
GCCCTACGCGCGCGGGCCGCAGCAGCTGGTGTCGCCCCCCGTGCTCTACTCCGCGCTCACCACCGAGCCCTCCACCGCGC
CGCGCACGCCCCCGGCCACCACGGGGCCCTCCTCCCCCGAGGTCCCCTTCGCGCGCTTCGTCGTCGACGACGGAGGGCAC
GAGCTGCTGTTCCACCACGCCGCCTACCAGCTGCGCCAGCAGGGCAGACCTGCACCCCTCGTCTCGCCGGGACCGGAGCC
GGGGTCCCCTTC---GTCGCCGCGGCTCTTCCGGAGGCTGCACCGGCGCGACCAGCAGGGCTCGCTTCTCGACGGCCACG
TCCCCGTCGCCTCCTCGTGTGAGGGCGCCGACGCCAGGGACGTAGACGATGATGAGGAC------GAGGAGGTGCCCGAT
AGCGCCGGGGAGTTCGTGTTCGGCCATGCCGACGGCCGCGGCGCCGCGCCGGATGAGGAGATAGTAGAAGGCAAGAAGTG
GCATTTCTTCCCCATGGCCACGGGTGAGCAGCACGCTAAGATG------TGAGCCCAATAGCGCTGCTGACCTGACAGTG
-----------CGACCCTGACAGTGTATCTAGTTCATCACCCTAAACTGATTCAGCAAACACAGTTTAGGCAAGGAAAAT
AATTTC-----------------------TTTATGTGCATGTATGTACACAAGCTTTAACTTTGCTGGACAATGTA-GTG
ACAAGAAGCTAAGTAATGTTGGTCCATG----------------------------------------------------
---------------------TCCCATGCACCTCTCTTCTG---------------------------------------
------------------------------------------------------------------TCCAGTAAGATTTA
AATTTGATTAGTTCAGTTAGATTTTTTATTTCACTCTAGCTAAAAGAATACTACTTA----AGAGAAGAACCAGTTCCAC
TCCCACCCCAGACATGATGAAAACACTAATGATCACGAAAGATGGAGAACTGGCCAGAATTGGAGCCAACACACTCA---
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------CGATAACACAGAAATGGTATCCACGTTCCAAAATA
TTGCCATTCATGAAGAAGAATCGGAAGAG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------
>SNPs
S----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSS------S-------------------------S----------------S------S-----S-------------
---------------------------------------------------------------------------S----
--------------------------SS-------------------S--------------------------------
------------------------S------------------------------------------------------S
--------------------------------------------------------------------------------
--------------------S----------SS-------------------------------------------S---
-------------------S----------------------S-----------------SSSSSSSSSSSSSSSSSSSS
S----------SS------------------------------S------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------------------
-----------------SS---SS-SS-S-S-------S-------------------------S---------------
------------------S-----------------------------SSSS----------------S-S-SSS-----
---S------------SSSSSSSSSSSSSSS------S----------S--S-----------------S----------
----------------S-------SSSSSSS----------------------S-SSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSS------------------SS--SS-------------------SSSSSSS-------S-------------
------------S-------------SSS-SSSS----------------------------------------------
---------------------------SS-SSSSSS------------------S----S--------------------
---S--------------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------S----------S-SSSS--SS--SSS-SS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-S
-------S---S--SSS---S-SS--SSSSS--SS-S-----SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-------------------------------------------------------
--------------------------------------------------------------------------------
-----------SS-----SSS--S------S-----S--------------------------------S-----S--S-
----S---------------------------------------------------------------------------
-----------------------S--------------------S-----S-----------------------------
------------------------------------S--S----------------------------------------
-------------S--------------S-----------------------------------------------S---
--------------------S-----------------------------------------------------------
------------SSS-------------------------------------S---------------------------
---------------S----S-S----------------S-S-------------S--------S---------------
------------------------S-------------------------------------------------------
----------------------------------S----S-S-SSSSSS-----------S-S-----SSSSSSSSSSSS
SSSSSSSSSSS---SS------------S----------S---SSSSSSSSSSSS----SSSSS-S----S-SSS--S-S
-SSS-SSSSSSSSSSSSSSSSSSSSSSSS---S--------------S-------S--------S----S---SSSS---
------------S-----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSS-------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------------
-----------S--------------S----S-S----------------SSSSSSSSSSS-----------S--S---S
S--SSSSSSSSSS-SS-----------------------------S--------------SS-------------SSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------------
--S-----------------S--------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_33
-------------CGCGGACTAGTCTCCATGTC-----------------------------------------------
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>reverse_2957
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----------------------------------------------------------------------------TGTT
GCGTAGACGATGGCTT----------------------------------------------------------------
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--------------------------------------------------------------------
>forward_110
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----------CGCATGTCCAACCAAAAGCA--------------------------------------------------
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>reverse_2961
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GCGTAGACGATGGCTTCAGA------------------------------------------------------------
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>forward_258
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------------------------------------------------------------------------------GG
ATGGCTGCCTTCCCTATC--------------------------------------------------------------
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>reverse_3219
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------------------CTTCAACCTCCCGCACATCT------------------------------------------
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>forward_2976
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----------------------------------------------------------------------------TGTT
GCGTAGACGATGGCTT----------------------------------------------------------------
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>reverse_4974
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-------------TGTCGAATTCCCATGCACCT-----------------------------------------------
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--------------------------------------------------------------------
