>input_sequence_29166
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-----------------------------------CCGGCCAGGTGGTGCTTCCCCAAGTCCTCCTCGGGTCGGTCCTGC
CCGGTCTTCCTTCCTCCTACTTTTCCCCAACACAAACAAAAGAAAAATGGAGTTAGCCATGGCCGCCGCCTACACCTCGC
GCCTGGGCCTGTCCCCCGCCGCGCACCCGTACGACGACGCATCCGTGGCCTGCGCCCTCGGCCAGCTCTACTCCACCAAG
GATCCGTTCGCCCTGCCGGTCAGCTGCCTCCTCCCGCCTCCCGAGCTGCCGCCGGCCTTCGGGTTGCCCGTCGGCGGCCT
CGCCCCCGTCTGCTGCTGCGCCAAAGCCGCGGCGGCGCCCGCGTTCCCGCCCTTTCCATGGGCGCACGTGCCCTCGCCGC
CAGCGCCGCCGCGCTGCGCCATCACGGAGATCGACGAGTCCCGGGAGGTGGAGTCGGAGGACAACCTCTCCCCTCGCTCC
GTCCTCACGCCCTGGAGGAGGCCGACGCCCGCCTCGGCGCTGTCTCCGCCTCCGCCTCTTGTGGTCGGGGGAAAACGGGC
CTTCGACCCAAGCAGCGAGAAGACTTCTCTGATGATCTGCAATATCCCCAACGGATTCGTGTAAGTGGCCTGCTCTTCTC
TGCCGCCAGCCATTTTCCCCTCTTCTTTTTGCTGAAATATTCTGTGAATTCTTGGTGTGCGGCGCAGGAAGCGGAGGTTC
ATGGCGATTCTGGACCAGCATTGCGTCCAGGAGAACGACAATCCTGAATGGCGTGTCGTTGGTGGTGGCAAGTTCGTGAG
GTCGGAGTATGACTTCCTCTACATCCCAATAGACTTCAGGTACTACTAGCATTTGCATTTCCGGATTTGCTAATTCTCAA
TTGCCTAAAAACGAATTCAGTCTAGTCGATTCTTCAGGAGAGTAGAGAGAGAGAGAGAGCAGCGCTCCGAGGCCTTAGTT
GACTGAAAACGAAATTCAGGTTAGTCCATTCTTCAGGAGAGTAGAGAGAGAGAAAGAGAGAGCAGCGGTCTGAGGCCTCA
G--GACTGAAAATGAACTTCAGGTTAGTCGATTCTTCGGGAGAAT--------AGAGACAGAGTGATAGCAGCACTCAAA
GGCCAAGATGTCAGTGACGTGGCCGGCCGCAGTGTCTCCAACTCAGCCGAGGATGAGAATTCACAGGTGTGGGTGGGGGA
CAATTTCAGTTACAGTCCTGCTCGGATTAGATAGCCGCCGAGCTCGAGACAAGACGCGGCGGCTTCGCCGGCGAGCCAGG
ACCTCACAGGTGGCAGGGACAATGCGATGCCGCCAGAGGAGAGGTCGGGGGCGAGACGGAAAGAAGATCGGGTGGGGGAA
AGTAAGACGAAGCAGTAGCCGTTGCATTTCAATCCAATGTCTT-AAAAATTGACTGATTTAAAATAATAATCAGG-AACT
GTTTTATAGGCTTCTGTTTTGTCTAATCCAAAGCTTGTTTGTTGTGTCCGTCTTTGTGCAGGACGAAGTACAACAAAGGC
TATGCGTTCGTCAACATGACGACGGCGACCGCGGCACGGCGGCTCCACGCGTTTCTGCACGGGCACCGCTGGGCCCTGGC
AGGCTCTCGGAAGGTGTGTGAGGTCGTGCATGCGGACATACAGGTATGCGCACACACATCGCCGGTCAACTCCACATCTT
ACCCTCCGGCCAACGCCGTAACTCGAAGAAATGTTTGCCTGCTCGCAGGGGGTGGATGCTTTGTCAGCTCACTTCTCCTG
CTCCAAGTTCCCCTGCGGTAACAAGGAGTTCCTGCCGGTGCGCTTCGGCCCGCCACGGGATGGCCTCCGGCCGACGGTGG
AGCGTGTGATTGGCCGCACGCTGGTCCACCGCCCCAGTGACCAATCCGCCCGCCCCACGCCGCATGCTGCACGTATGTGT
CCTCAAAGTTATAATCTGAACTTTTTCTGAACTTTGTATGGCTAGTAAGCAGTCGTGACCTGACTTATATTGAGGTTTAG
GGCCAGTTCTTTTGGGGCTTATGGGTGGCTGC---------CTGCCCCATACCCAGCTTATCCTGGCAGCCCAACCTAAA
TTTTATTGTAGAAGCCTACTACTATGATGTTGTATTATGCTAGTGAAATGTACTCTTAGTTACTA---------------
--------------------------------------------------------------GGAGTAGTTTCTTAGCAT
TAAAAACTAACTGGCTGATCCTTTCTCTCTGATGTTCCGTTATTGACTGATCCTTTCTCTCTGATTAAGC--TAACTAAC
TGGCTGTTGGATAAATTTTTGGTCCTCT-TGCAGAAAGAGGAGGCAAATCGAAACCTGCTGCAGTGGGGAACAAAACTGT
TTGAGCTGGTGGCTACTGGCTAGTGATGTCTTTGCTTCGTCGCGAGGATGGAGGCCTACTCACCTTAGGGTAGGTGCTTA
GTGTGCTTGGTTACCCGAGATGTTGTGATCAAG-TTAGATGGTTCTTTTGTGGGTGCATGAGTATCTTCTAGTATCTGTA
TCCTAGCTTGGAGATGTTGGTTTCATTTGCCTTCCCTAGGTAGCA------------------GCCATCCGATTTCCTTT
TAGTTGTCACTAACTGTACTCATCTGCCCAGAACTTTGTTAGATTGGTGTCTGCATCTGTTCGTATGTTATCGGCCCGTG
TATGTGGTTAAAGATTTGGCATCCCGTTGCAATGTGTGATGTTGATGGCGTTGAACGAAGAG-TTAATATTGGGGGAGAT
TTTTGGCT--CCCTGAGCACCAATGTGCTGTTTTTCTGCCCGCAAGTCTCTG----------------------------
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------------------------------------------------------------------
>chr5D_1_TraesCS5D01G325200
TCCGCCACCAAGGTGATCTCCAACCTGCCAGACCACAACACTTCAC-ACAACAGACAACAGTGAGGAGATGGGAGATGGT
TGCGAGTGTGGCGCGAAGGAGGGAGAGGCCAACGCATTGGCCGACACCG---CCGATGTCATCGAGAGGAATGGTGAATC
GCTCTTCCATGAATAGCGGGTCGAGTGGTTTGTCTTTTTTCCTATATGCTAATCATCACGATATCGCACTTTACCAAATC
AATTTTAAAAGTGCATTCTT------------------------------------------------------------
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--------------------------------------------------------------------AAATGACAAGAT
TGAGAAGGAAATTTATGTTAAACAATCTCTCGGATTTATTCATCATAAAAAACTAATAATGTCTGTAAACTTCCCAAAGC
TCTATATGGTCCTAAGCAACTTCTTAGAGCTTGGTACAAATGCTCAACAAAGTTTCTTTTAAAGCAGACTA-GGCATAGC
CTAGTGGTGAAAAG-GGGTGATGCTTTCCCACCAATCTAGATTCAATGCACGGTATTTTATAATTTAGGTTTGTTGCATC
AATTATACTGCA-GTGACACCTTACAATCATTCTGT---AAAAAAACTCTACAATATAGG--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACGTACTTT
TGTGTCATAAACAAAATATACTAAAACCATGGCAAAAAACATGTTACAAATTTAATAAGTTCGAATGCAAAAGATGTATA
GAAACCTGAATGTCAAGCTTGACTAATATCCCTGAGGCCATATTCGGTTGACAGGGTTGTGGAGGGGTTTTGACAGGGAT
TGAGATGGATTAAATCCTCTACAAGTCAAATCCCCCCAAATCCTCTTAGGTCAGGGTGTAACCGAACAAAGCCTGGGAAA
ACAGCTGCAGATCAACACTACCACCGCCGTCCCTTAAAATTAGACGTTTCTAATTTAAACTGTAAAAATGTTTTATAAAA
--GGGATTTTGTAGGTACATTTGCAATTAAAGCTGAGAGTA---------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------CCGCGGTGGTGCCGGTGGCGTGTGCTGCCGTTCC-----
TGCGGTGCCACCTGCTGCGTGATACAGGGGCCAAGCCGGCCAGGTGGTGCTTCCCCAAGTCCTCCTCGGGTCGGTCCTGC
CCGGTCTTCCTTCCTCCTACTTTTCCCCAACACAAACAAAAGAAAAATGGAGTTAGCCATGGCCGCCGCCTACACCTCGC
GCCTGGGCCTGTCCCCCGCCGCGCACCCGTACGACGACGCATCCGTGGCCTGCGCCCTCGGCCAGCTCTACTCCACCAAG
GATCCGTTCGCCCTGCCGGTCAGCTGCCTCCTCCCGCCTCCCGAGCTGCCGCCGGCCTTCGGGTTGCCCGTCGGCGGCCT
CGCCCCCGTCTGCTGCTGCGCCAAAGCCGCGGCGGCGCCCGCGTTCCCGCCCTTTCCATGGGCGCACGTGCCCTCGCCGC
CAGCGCCGCCGCGCTGCGCCATCACGGAGATCGACGAGTCCCGGGAGGTGGAGTCGGAGGACAACCTCTCCCCTCGCTCC
GTCCTCACGCCCTGGAGGAGGCCGACGCCCGCCTCGGCGCTGTCTCCGCCTCCGCCTCTTGTGGTCGGGGGAAAACGGGC
CTTCGACCCAAGCAGCGAGAAGACTTCTCTGATGATCTGCAATATCCCCAACGGATTCGTGTAAGTGGCCTGCTCTTCTC
TGCCGCCAGCCATTTTCCCCTCTTCTTTTTGCTGAAATATTCTGTGAATTCTTGGTGTGCGGCGCAGGAAGCGGAGGTTC
ATGGCGATTCTGGACCAGCATTGCGTCCAGGAGAACGACAATCCTGAATGGCGTGTCGTTGGTGGTGGCAAGTTCGTGAG
GTCGGAGTATGACTTCCTCTACATCCCAATAGACTTCAGGTACTACTAGCATTTGCATTTCCGGATTTGCTAATTCTCAA
TTGCCTAAAAACGAATTCAGTCTAGTCGATTCTTCAGGAGAGTAGAGAGAGAGAGAGAGCAGCGCTCCGAGGCCTTAGTT
GACTGAAAACGAAATTCAGGTTAGTCCATTCTTCAGGAGAGTAGAGAGAGAGAAAGAGAGAGCAGCGGTCTGAGGCCTCA
G--GACTGAAAATGAACTTCAGGTTAGTCGATTCTTCGGGAGAAT--------AGAGACAGAGTGATAGCAGCACTCAAA
GGCCAAGATGTCAGTGACGTGGCCGGCCGCAGTGTCTCCAACTCAGCCGAGGATGAGAATTCACAGGTGTGGGTGGGGGA
CAATTTCAGTTACAGTCCTGCTCGGATTAGATAGCCGCCGAGCTCGAGACAAGACGCGGCGGCTTCGCCGGCGAGCCAGG
ACCTCACAGGTGGCAGGGACAATGCGATGCCGCCAGAGGAGAGGTCGGGGGCGAGACGGAAAGAAGATCGGGTGGGGGAA
AGTAAGACGAAGCAGTAGCCGTTGCATTTCAATCCAATGTCTT-AAAAATTGACTGATTTAAAATAATAATCAGG-AACT
GTTTTATAGGCTTCTGTTTTGTCTAATCCAAAGCTTGTTTGTTGTGTCCGTCTTTGTGCAGGACGAAGTACAACAAAGGC
TATGCGTTCGTCAACATGACGACGGCGACCGCGGCACGGCGGCTCCACGCGTTTCTGCACGGGCACCGCTGGGCCCTGGC
AGGCTCTCGGAAGGTGTGTGAGGTCGTGCATGCGGACATACAGGTATGCGCACACACATCGCCGGTCAACTCCACATCTT
ACCCTCCGGCCAACGCCGTAACTCGAAGAAATGTTTGCCTGCTCGCAGGGGGTGGATGCTTTGTCAGCTCACTTCTCCTG
CTCCAAGTTCCCCTGCGGTAACAAGGAGTTCCTGCCGGTGCGCTTCGGCCCGCCACGGGATGGCCTCCGGCCGACGGTGG
AGCGTGTGATTGGCCGCACGCTGGTCCACCGCCCCAGTGACCAATCCGCCCGCCCCACGCCGCATGCTGCACGTATGTGT
CCTCAAAGTTATAATCTGAACTTTTTCTGAACTTTGTATGGCTAGTAAGCAGTCGTGACCTGACTTATATTGAGGTTTAG
GGCCAGTTCTTTTGGGGCTTATGGGTGGCTGC---------CTGCCCCATACCCAGCTTATCCTGGCAGCCCAACCTAAA
TTTTATTGTAGAAGCCTACTACTATGATGTTGTATTATGCTAGTGAAATGTACTCTTAGTTACTA---------------
--------------------------------------------------------------GGAGTAGTTTCTTAGCAT
TAAAAACTAACTGGCTGATCCTTTCTCTCTGATGTTCCGTTATTGACTGATCCTTTCTCTCTGATTAAGC--TAACTAAC
TGGCTGTTGGATAAATTTTTGGTCCTCT-TGCAGAAAGAGGAGGCAAATCGAAACCTGCTGCAGTGGGGAACAAAACTGT
TTGAGCTGGTGGCTACTGGCTAGTGATGTCTTTGCTTCGTCGCGAGGATGGAGGCCTACTCACCTTAGGGTAGGTGCTTA
GTGTGCTTGGTTACCCGAGATGTTGTGATCAAG-TTAGATGGTTCTTTTGTGGGTGCATGAGTATCTTCTAGTATCTGTA
TCCTAGCTTGGAGATGTTGGTTTCATTTGCCTTCCCTAGGTAGCA------------------GCCATCCGATTTCCTTT
TAGTTGTCACTAACTGTACTCATCTGCCCAGAACTTTGTTAGATTGGTGTCTGCATCTGTTCGTATGTTATCGGCCCGTG
TATGTGGTTAAAGATTTGGCATCCCGTTGCAATGTGTGATGTTGATGGCGTTGAACGAAGAG-TTAATATTGGGGGAGAT
TTTTGGCT--CCCTGAGCACCAATGTGCTGTTTTTCTGCCCGCAAGTCTCTGCC-CTTTGATTGTTGCAACAATTGATGA
TGTTTGAAATAATTTTATCTAGATTAATAACATAACGCCTGGTCATGTATGAACCGCTGCCCTTGGTTATCTCTGGAGC-
AAGGTAAGGTTATCGTCAGATTTCGGGTGAT-----GGAGAAAACATATCTGGATTTTCCCCCCATATT-----------
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--------------------------------------------------------------------------CTTGTA
CATAAATGCATTTTTAGTAAAATAGATGA---------------------------------------------TTCCGT
-AAATGGTGACATAAGGTAACTTC----GATACATGGAAGAAGTATATCAAGGGACTTGGTAGTTCTAAGATGGGATTTG
CTCCTTTGATGATAAAGATATACTC-------TTTGGGCCCACTT--------GGTATCCATCATTGTCTGAT-------
-------------------------------------------------------------------CATACATATAGCA
TGA------------------------------------------------CCGGAATGCAGAAAC--------------
---------------GAAAAAAGAATAAAATCGGTAACAAGGAATAACCTGGTATTGTAATCAACCAGTTGTTTCACAAG
GATGCCGATAAAAGTTTCACCTCGGGATTTGTGAAGTATCGTGAAGCAAAGAAACTGTGTACGCAAACCCAAGTTTCGCT
CGATAAAAGATATTGGTGTA------------------------------------------------------------
-----GTAGTTTAGTAGAGAACTAGGAGACAGTGGAGTATGAGAAAAGGCATCGGAAGTGTCTGGGTATTTTTCGAAAAT
GTTTCGAGAGGTTTCAAGATGGTCCCAGTAATGCTGAAAATGTTTCGAAGTTGCTCAGGGAGGCCTTCGAAGGTCGTGGA
AGATTCCAGGTGGTCCAATTGGGCTGCCACCTTGGTTGCCGCAACCACATGGGCCCAAATGGTGCT-CCCCCTTTAGCTT
ATTGGGTAAGGAAGTGGAGCTGTGGGAGAAAGGAAAGGATCTCTAGGGGATCCTCCTCCTTATCGCACATGGAAGGGACG
GATCCCTTGGGGATCCTTCCCCTTGGTGCGACCAACCCTTGGGGCTGCTCCCTCCCCAAGCCGCACCCCATATGCCACCT
ACTCCCTCCGTCCCATAATGTAGTGCATATGGATTTTCTTAAAAATCAAACCCCCTCGACTTTGAG
>chr5B_1
TCCGCCACCAAGGTGATCTCCAACCTTCCAGACCACAACGCT-CAC-ACAACAGGCAACAATGAGGAGAGGGGAGATGGT
TGCGAGTGTGGCGCGAAGGAAGGAGAGGCCAACGCATTGGCCAACACCG---CCGATGCCGTCGAGAGGAATGGTGAATC
GCTCTTCCATGAATAGTGGATCGAGTGGTTTGTCTTTTTTCCCGTATGCTAATCATTGCAATATCGCACTTTACCAAATC
GATTTTAAAAGTGCATTCTTAAAGAGGTAATAACATTGGTGGTGCCTAAACTTGCCATCGACGTTCACTTTGGTGCCTAA
ACTTGAAAAATACACCGAATTGGTTCTATAACTTGACAGTATGGTTCAAATACGGAACTACAACATGTTAGTTTAATGTC
TTTTATGCACTGTAATATTTTATATATGCGACACAATTCTGGAGTTAAATGGGGTGGAGTTAGTGCACCCATTTCCCACA
TGTTAGGTGTTTTTCTTATTTTCGAAATTACAAAATATTCAGGTAGTATATGAAGTGTTCATGCTTTTAGGAAATGTATT
TCTAGCTGTAAAAAGTGTCCACGTGTTTTAATAAAGTGTATATGTTTGTCAAAAGATATATTTTTGAATAAAAATAAATT
CTTAAATATGTGTGAAAAAATAAACAATGGCTTAGTGTTCCACCAGGGTTTTATACATTCTTATATTTAAATTTTTAAAA
ATTAAACTACACATACATTTGTCTAGTTAAAAGCATTTTAATTACATGACCTTTTAATAACACATAAATATTTTCGAAAA
TTACATTAACATGTTTTAAAATAAAAATTTTATAGATATTATTTCTAAGACAAGAAGACTCTAGCTTTATTTTTTGTTTA
CAAATACAATAATCCACATAGGATTTAGAATTACTATAACTGAAAAAGAAACTCACACGTTGAAGGGTCACCTAAAAAAA
GAAAAAGATCTAATAGTTTTAAATAAAGGATCACGTGATATATTTCTTAAACATGAAGATTTTGAGAATTATATTAACAT
TTCGAAAATGTATAACTATTAAAATTTGCACAATTATTTTATTACATATGTGAATCCTTACAAATATTATGAAACCATTT
TATTAACCATTTTGTATTATTTTAATTTTGTGAATATGTAAAATTTCATTAAAAATTTTTGAGGGATCATTAACATTTAT
TCAATATTGTGACAATAGTTTGAATATTGTTCTATAAAATAAAAAATAACTAGCATGTGGAAAATGGGCATTTCCGTCTA
ATTAGCTAGATAAAGGTTAGCGATGCGTAATAGTCAACTAACTATTCCTGGTGAAGTGGTTTGCCCTGGTCCTTCATAGC
TCACAGGTGGCCTGTTCAAATCCCAGCCGTTGTACATTTTCATTTATTTTGATTGTGCACTAACTGGTGGGACCCGTTGG
CCATTTAGGCACACTCTTTCCATGTCAGTCTGTCTCGGCACTGCAAGTGGGCCCCGCGTCACGCTTGCATGTCTATTCAA
CAATACATACATATCTGGATGTGATTTGCACCGTATTTAAACTATACTGCCAAGTTATAGAACCAGTTCGGTGTATTTTT
TAAGTTTAGGCACCAAAGCGAACGTCGATGGCAAGTTTAGGCACCACCAGTGTTATTACCTCATTCTTAAATGACAAGAT
TGAGAAGGAAGTTTATGTTAAACAATCTCTCGGATTTATTCATCATAAAAAACTAATAATGTATGTAAACCTCTCAAAGC
TTTATATGGTCCTAAACAACTTCATAGAGCTTGGTACAAATGCTCAACAAAGTTCCTTTTAAAGCAGACTAAGACATAGC
CCAGTGGTGAAAAATGGGAGATGTCTTCCCACCAATCCAGATTCAAGACATGGTA-TTTATAATTTAGGTTTGTTGCATC
AATTATACTATA-GGGACCCCTTACAGTCATTCTGTAAAAAAAAAACTCTACAATATAGA--------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------AACATACTTT
TGTGTCCTAAACAAAATATACTAAAACCATGGCAAAAACCATGGAACGGATTTAATAAGTTCGAATGCAAAAGAT-TATA
GGAACCCGAATGTCAAGCTTGACTAATATCCCTGG---------------------------------------------
------------------------------------------------------------------------CTGAGAAA
ACAGGTGCAGATCAAAACTGTA----------------------------------------TAAAAATGCTTTATATTA
AGGAAATTTTGTAGGTACATTTGCAATGAAAGCTGAGAGTA---------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------CCGCGGTGGTGCCGGTGGCGTGTGCTGCCGTTCCTGCGG
TGCGGTGCCACCTGCTGCGTGATACAGGG-CCAAGCCGGCCAGGTGGTGCTTCCCCAAGTCCTCCTCGGGTCGGTCCTGC
GCGGTCTTCCTTCCTCCTACTTTTCCCCAGCACAAACAAAAGAATAATGGAGTTAGCCATGGCCGCCGCCTACACCTCGC
GCCTGGGCCTGCCCCCCGCCGCGCACCCGTACGACGACGCATCCCTGGCCTGCGCCCTCGGCCAGCTCTACTCCACCAAG
GATCCGTTCGCCCTGCCGGTCAGCTGCCTCCTCCCGCCTCCCGAGCTGCCGCCGGCCTTCGGGTTGCCCGTCGGCGGCCT
CGCCCCCGTCTGCTGCTGCGCCAAAGCCGCGGGGGCGCCGGCGTTCCCGCCCTTTCCATGGGCGCACGCGCCCTCGCCGC
CTGCGCCGCCGCGCTGCGCCATCACGGAGATCGACGAGTCCCGGGAGGTGGAGTCGGAGGACAACCTCTCCCCTCGCTCC
GTCCTCACGCCCTGGAGGAGGCCGACGCCCGCCTCGGCGCTGTCTCCGTCTCCGCCTCTTGTGGTCGGGGGCAAACGGGC
CTTCGACCCAAGCAGCGAGAAGACTTCTCTCATGATCTGCAATATCCCCAACGGATTCGTGTAAGCGTGCTGCTCTTCTC
TGCTGCCAGCCATTTTCCCCTCTTCTTTTTGCTGAAATACTCTGTGAATTCTTGGTGTGCGGCGCAGGAAGCGGAGGTTC
ATGGCGATTCTGGACCAGCATTGCGTCCAGGAGAACGACAATCCTGGATGGCGTGTTGTGGGCGGCGGCAAGTTCGTGAG
ATCGGAGTATGACTTCCTCTACATCCCAATAGACTTCAGGTACTACTAGCACTTGCATTTCTGAATTTGCTCATTCTCAA
TTGCCTAAAAACGAATTCAGTCTAGTCGATTCTTCGGGAGAGT------AGAGAGAGAGCAGCGCTCCAAGGCCTTAGTT
GACTGAAAACGAAATTCAGGTTAGTCCATTATTCAGGAGAGTAGAGAGAGAGAAAGAGAGAGCAGCGGTCCGAGGCCTCA
GTTGACTGAAAGCGAAATTCAGGTTAGTTGATTCTTTGGGAGAGTAGAGAGAAAGAGAGAGAGAGAGAGCAGCACTCAAA
GGCCAAGATGTCGGTGATGTGGCCGGCCGCAGTGTCGCCAGCGCAGCCGAGGATGAGAGTTCACAGGTGCGGGTGGGGGA
CAATTTCATTTACAGTCCTGCTCGGATTAGATAGCCGCCGAGCTTGAGACAAGACGCGGCGGCTTTGCCCGCGAGTCAGG
ACCTCACAGGTGGCAGGGCCGCCGCCATGCCGCCAAAGGAGAGGTTGGGGGCGGAGCGGAAAGAAGATCGGGTCGGGAGG
TGCAATACGAAGCAGTAGCCGTTGCATTTCAATCCAATGTCTTGAAAAATCGACTGATTTAGAATAATAATCAGACAACT
GTTTTATAGGCTTCAGTTTTGTCTAATCCAAAGCTTGTTTGTTGTATTCGTCTTTGCACAGGACGAAGTACAACAAAGGC
TATGCGTTCGTCAACATGACGACGGCGACCGCGGCGCGGCGGCTCCACACGTTTCTCCACGGACATCGCTGGGCCCTGGC
GGGCTCTCGGAAGGTGTGTGAGGTTGTGCACGCGGACATCCAGGTATGCACACACACTTAGCTGGCCAACTCCATATCTT
CGCCTCCGGCCAACGCCGTGACTCCAAGAAATGTTTGCCTGCTCGCAGGGGGTGGATGCTTTGTCAGCGCACTTCTCCTG
CTCCAAGTTCCCGTGCGGTAACAAGGAGTTCCTGCCGGTGCGCTTCGGCCCGCCACGGGATGGCCTCCGGCCGACGGTGG
AGCGTGTGATTGGCCGCACGCTGGTCCACCGCCCTGCTGATCAATCCGCCCGCCCCACGCCGCATGCTGCACGTATGTGT
CCTCAAAGTTATAATCTGAACTTTGTATGGC--------------TAAGCAGTCGTGGCCTGACTTATGTTGAGGTTTAG
GGCCAGTTCTTTTGGGGTTTATGGGTAGCTGCCAAAATAAGCTG-CCCCTACCCAGCTTATTCTGGCAGCCCAACCTAAA
TTTTATTCTAGAAGCCTACTACTATGATGTTGTATTATGCTAGTGAAATTTATTCTTAGTTACTACTCCCTCCGTCCCAT
AATATAAGAACGTTTTTGACACTAGTGTGGAGTTAAAAACGTTCTTATATTTTGGGACAGAGGGAGTAGTTTCTTAGCAT
TAAAAAC-AACTGGCTGATCCTTTCTCTCCGATGTTGTATTATTGACTGATCCTTTCTCTCTGATTGAGC--TAACTAAC
TGGCTGTTGGATACATTTTTGGCCTCTCCTGCAGAAAGAGGAGGCAAATCGAAACCTGCTGCAGTGGGGAACAAAACTAT
TTGAGCGGGTGGCTACTGGCTAGTGATGTCTTTGCTTCGTCGCGAGGATGGAGGCCTACTCACCTTAGGGTAGGTGCTTA
GTGTGCTTGGTTACCAGAGATGTTGTGATCAAGTTTAGATGGTTCTTTTGTGGGTGCATGAGTATCTTCTAGTATCTGTA
TCCTAGCTTGGAGATGTTGGTTTCATTTGGCTTCCCTAGGTAGCAGCTATGCTTGGTGGTTCTGCCATCCGATTTCCTTT
GAGTTGTCACTAACTGTACTCATC---CCAGAACTTTGTTAGATTGACTTCTGCATGTGTTCGTATGTTATCCGCCCGTG
TATGTGGTTAAAGGTTTCGCATCCCTTTGCGATGTGTGATGCTGACGGTGCTGAACGAAAAGGTTAATATTTGGGGAGAT
TTGTTGGCCCCCCCGAGCACCAATGTGCTGTTTTTCTGCCCGCAAGTTTCTGCCCTTTTGATTGTTGCAACAATTGGTGA
TTTTTGAAATATGTTTATCTAGATTAATATCATAACGCTTGATCGTGTATGCATCGCTGCCCTCGGTTATCTCTGGAGCA
AAGGTAAGGTTATCGTCAGATATCGGGTGATATATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTTGTA
CAGAAATGCATTTTTAGTACAATAGAACTATGAAGTCAATGCTCTAGCCTAACTAATTTGAGGTTGCCAAACGTTTCGGT
AAAATGGTGACCATAACGGTAACTTCCAGATACATGGAAGAAGTATATCAAGGGGCTTG----TTCTAAGATGGGATTTG
CTCCCATGACGATGGAGAGATATTCTCCGAGCT-------CACTTGGAATTAAGCTATCCATCATTGTCTGGCCATACAT
ACATATAGCTGGAGAGATATTCTCCGAGCTCACTTGGAATTAAGCTATCCATCATTGTCTGGCCATACATACATATAGCG
AGATATGATCATGGGTTTGACCACATATAGCGTGATATGATCATGGAGTTACCGGAATACAGAAACAAGAAAATGTTACC
AGAATACAGAAACAAGAAAATAGAATAAAATCGGTAACAAGGATA-ACTTGGTATTGTGATCAACCAGATGCTTCACAAG
GATACCGATAAAAGTCTCAACTCTGGTTTTGTTAAGTATTGCGAAGCAAAGGAATTGTGTACGCAAACCCAAGTTTCGCT
CGATAAAAGATATTCGTGTATATGTGAGAATCAATATGGATGTCCAGATCTCATCGAACCTGCAGGGTCAATTGCTTAAC
TGTTAGTAGTTTGGTAGAGAACTAGGAGACCATGGAGTATGAGAAAAGGCACCAGAACTGTTCCGGGTATTTTTGAAAAT
GTTTTGGGAGGTTTTAAGAAGGTCCCAA--------AAAATGTTTCGAAGGAGCTCAGGGAGGCCTTGGAAGGTCGTGGA
AGATTCCAGGTGGTCCAATTGGGCTGCCACCTTGGTTGCATCGGCCACATGGGCCCAAATGATGCGCCCCCCTTCAGCTT
ATTGGGCAAGGAAGTGGAGCTGTGGGAGAAAAGAAAGGATCTCTAGGGGATCCTCCTCCTTGTTGCGCATGGAAGGGACG
GATCCCTAGGGGATCCTTCCCCTTGATGCGACCAGCCCTTGGGGCTGCTCCCTCTCCAAGCTGCACCCACTATGCTACCT
A-----------------------------------------------------------------
>chr5A_1
TCCCC-ACCAAGGTGATCTCCAACCTGCCAGACCACAACGCTTCACAACAACAAGCAACAGTGAGGAGAGGGGAGATGGT
TGCGAGTGTGGCGCGGAGGAGGGAGAGACCAACACATTGACCGACACCATCTCCGATGCCGTCAAGAGGAATGGTGAATC
ACCCTTCCATGAATAGGGAAATGAGTGGTTTGTC-TTTTTCCCATATGATAATCATCACAATATCGCACTTTGCCAAATC
GATTTTAAAAGTGCATTCTTAAA---------------------------------------------------------
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-----------------------------------------------------------------------TGACAAGAT
TGAGAATGAAGTTTTTGTTAAACAATCTCTCAGAATTATCCATCATAAAAAACTAATAATGTCTATAAACCTCAGAAAGC
TCTATATGGTCTTAAGCAACTTCTTAGAGCTTA----AAATGATCAACAAAGTTTCTTTTGAAGCAGGATAAGGCTTAAC
CTAGTGGTGGAAAAGGACTGAAGCCTTCCCACCA-TCTAGACTCAAGGCATGGTA-TTTGCAATTTAGATTTGTTGCACC
AGTTATACTGTACGAGATCACTTACAACCATTTTGT---AAAAAAACTCTATTCACTAAGTGAGTTTATGGTAAATTATT
TGGGTGCCAAGTTTATGTTTATTATATCATCTTTGGTTCCACTAACCATCGTTTTGGTGAGAATATGAAAAGTTAATCAT
CGAGAGGCACAAGTTATCAATGACGGACGAGCTGGGATTCTTTCTCAATCTCCAATTAAACAAAGGAAGGAACACACTTT
TGTGTCACAAACAAAATATACTAAAACCAT-------------GAACGGATTTAATAAGTTCAAATGCAAAACATATATA
CGAACCCAAATGTCAACCTTGA----------------------------------------------------------
------------------------------------------------------------------------CTGAGAAA
ACAGTTGCAGATCAAACCTACCACCGTCGTCCCATAATATAAGACATTTCTAATCTAAGCCGTAAACACGTTTTATATTG
AGGGAATTTGGTAGGTACATTTGCAATGAAAGCTCAAAGTACCTCGGTGGTGGTATCAGGTGATACCAAGGTTTAAGTGA
TACCATGATACGGGCTTCCGAGAGCCGTGGGATCTCAGATCTGATGGCTACCGCAAGCTTTTGAACATTTTGCAAAAACG
CCAACCGGAAGTCTTAAAATTACGTGCAGATACAATAGCTCTTTAGACGCCGTCAGATCTGGAATCCAACGGCCGAGAAG
TCTATATCTCCTAAGTTTTGGGTATCACTTGAAATTTCCCCCCGCGGTGGCGCCGGTGGCGTGTGCTGCCGTTCC-----
TGCGGTGCCACCTGCTGCGTGATACAGGGGCCAAGCCGGCCAGGTGGTGCTTCCCCAAGTCCTCCTCGGGTCGGTCCTGC
CCGGTCTTCCTTCCTCCTACTTTTCCCCAGCACAAACAAAAGAAAAATGGAGTTAGCCATGGCCGCCGCCTACACCTCGT
GCCTGGGCCTGCCCCCCGCCGCGCACCCGTACGACGACGCATCCGTGGCCTGCGCCCTCGGCCAGCTCTACTCCACCAAG
GATCCGTTCGCCCTGCCGGTCAGCTGCCTCCTCCCGCCCCCCGAGCTGCCGCCGGCCTTCGGGTTGCCCGTCGGCGGCCT
CGCCCCCGTCTGCTGCTGCGCCAAAGCCGCGGGGCCCCCCGCGTTCCCGCCCTTTCCGTGGGCGCACGCGCCCTCGCCGC
CAGCGCCGCCGCGCTGCGCCATCACGGAGATCGACGAGTCCCGGGAGGTGGAGTCGGAGGACAACCTCTCCCCTCGCTCT
GTCCTCACGCCCTGGAGGAGGCCGACGCCCGCCTCGCCGCTGTCTCCGCCTCCGCCTCTTGTGGTCGGGGGCAAACGGGC
CTTCGACCCAAGCAGCGAGAAGACTTCTCTGATGATCTGCAATATCCCCAACGGATTCGTGTAAGCATGCTGCTCTTCTC
TGCTGCCAGCCATTTCCCCCTCTTCTTTTTGCTGAAGTACTCTGTGAATTCTTGGTATGCGGCGCAGGAAGCGGAGGTTC
ATGGCGATTCTGGACCAGCATTGCGTCCAGGAGAACGATAATCCTGAATGGCGTGTCGTTGGCGGTGGCAAGTTCGTGAG
GTCGGAGTATGACTTCCTCTACATCCCAATAGACTTCAGGTAGTACTAGCATTTGCATTTCTGAATTTGCTAATTCTCAA
TTGCCTGAAAACGAATT-AGTCTAGTCGATTCTTCAGGAGAGT------AGAGAGTAGAGAGAGNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN----------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------TCCTG
CTCCAAGTTCCCCTGCGGTAACAAGGAATTCCTGCCGGTGCGCTTCGGCCCGCCACGGGATGGCCTCCGGCCGACGGTGG
AGCGTGTGATTGGCCGCACGCTGGTCCACCGCCCCACTGATCAATCCGCCCGCCCCATGCCGCATGCTGCACGTATGTGT
CCTCAAAGTTATAATCTGAACTTTTTCTGAACTTTGTATGGCTAGTAAGCAGTCGTGACCTGAATTGTATTGAGGTTTAG
GGCCAGTTCTTTTGGGGCTTACGGGTAGCTGCCAAAATAAGCTGCCCCCTACCCAGCTTATTCTGGCAGCCCAACCTAAA
TTTTATTCTAGAAGCCTACTACTATGATGTTGTATTATGCTAGCGAAATGTACTCTTAGTTACTA---------------
--------------------------------------------------------------GGAGTAGTTTCTTAGCAT
TAAAAACTAACTGGCTGATCCTTTCTCTCTGATGTTCTATTATTGACTGATCCTTTCTCTCTGATTAAGCTATAACTAAC
TGGCTGTTGGATACATTTTTGGTCCTCT-TGCAGAAAGAGGAGGCAAATCGAAACCTGCTGCAGTGGGGAACAAAACTGT
TTGAGCTGGTGGCTACTGGCTAGTGATGTCTTTGCTTCGTCGCGAGGATGGAGGCCTACTCACCTTACCGTAGGTGCTTA
GTGTGCTTGGTTACCCGAGATGTTGTGATCAAGTTTAGATGGTTCTTTTGTGGGTGCATGAGTATCTTCTAGTATCTGTA
TCCTAGCTTGGAGATGTTGGTTTCATTTGCCTTCCCTAGGTAGCAGCTATGCTTGGTGGTTCTGCCATCCGATTTCCTTT
GAGTTGTCACTAACTGTACTCATCTGCCCAGAACTTTGTTAGATTGGTGTCTGCATCTGTTCGTATGTTATCCGCCCGTG
TATGTGGTTAAAGATTTGGCATCCCGTTGCAATGTGTGATGTTGATGGCGCTGAACGAAGAGGTTAATATTGGGGGAGAT
TTTTGGCT--CCCTGAGCACCAATGTGCTGTTTTTCCGCCCGCAAGTCTG---CCCTTTGATTGTTGCAACAATGGGTGA
TATTTGAAATAATTTTATCTAGATTAATAACATAACGCCTGGTCATGTATGCATCGCTGCCCTCGGTTATCTCTGGAGCA
A-GGTAAGGTTATCGTCAGGTTTTGGGTGATATATCGGAGAAAACATATCTGGATTTTTTT-CCATATT-----------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------CTTGTA
CAGAAATGCATTTTTAGTAAAATAGAACTGTGAAGTCAATGCTCTAGCCTAACAAACTTGAGGTTGCCAAACGTTTCCGT
-AAATGGTGACCATAACGGTAACTTCCACGCTTCCAGGACT---------------TTG----TTCTAAGACGGGATTTG
CTCCTCTGACGATGGAGGGATACTCTTCGGAGTTTGGACCCACTCGGTATTAAGGTATCCATCATTAGCTGAC-------
-------------------------------------------------------------------TATACATATAGCG
TGATATGATCATGGGT-----------------------------------------------------------TTACC
AGAATACAGAAACAAGAAAATAGAATAATATCAGTAATAAGGATC-ACTTGGTATTGTGATCAACCAGTTGCTTCACAAG
GATATCGATAAAAGTCTCACCTGAAGTTTTGTTAAGTATCGCGGAGCAAAGGAACTGTGTACGCAAAGCCAAGTTTCGCT
CGATAAAAGATATTCGTGTATATGTGAGAATCAATATGGATGTCCAGATCTCATCGAACCCGCAGGGTCAAATGCTTAGT
TGTTAGTAGTTTGATAGAGAGCAAGGAGACACTTGAGTATTAGAAAAGGCACCGGAAGTGTTCCGCGTATTTTCGAAAAT
GTTTCGGGAAGTTTCAAGAAGGTCCAAGTAATGCCGAAAATGTTTCAAAGGTGCTCACAGAAGTCTTGGAAG--CGTGGA
AGATTCCAAGTGGTCCAATTGGGCTGCCACCTTGGTTGCAGCGGCCACATGGGCCCAAATGGCGCA-CCCCCTTCAGCTT
ATTAGGCAAGGAAGTGGAGCTGTGTGAGAAAGGAAAGGATCTCTAGGGGATGCTCCTC---GTTGCACATGGAAGGGACG
GATCCCCAGGGGATCCTTCCCCTTGATGCGACCAGCCCTTGGGGTTGCCCCCTCCACAAGTTGCATCCCCTATGCCACCT
A-----------------------------------------------------------------
>SNPs
---------------------------------------S--------------S--------------S----------
----------------------------------------------------------S-S-------------------
----------------S--S----------------------S----------------S--------------------
S-------------------------------------------------------------------------------
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----------S-----------------------------------------------------------S--S------
--------------------------------------------------------------------------------
-------------S----------S---------------------S---S----S------------------------
----------S---S---S-------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
--------------------------------------S----SS--SS--------------------------S----
-S----S---------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S----
----S----------S----------S------S---S--S----S--------S---S-S----------------SS-
----S----------------------S----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S--------------------------------------------------
-----------S--------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------S-----------------------------------S-----------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
-----------------------------------------------------------------S-SS-----------
---S-----------------------------------S----------------------------------------
--------------------------------------------------------------S-----------------
-------------------------------------------------------------S-S----------------
-------------------------------------------SSSSSS-------------------S-----------
------------------------------S---------------------------------------S---------
-----------SS---S-----------S-------S------S--------------S----S--S-------------
------------S----S------------------S---S-S---------------S----------S----------
--------S-----------------------------------S--------------------S---S-----S----
------------------S-SSS--S---------S---------S-------SSS-----------------S---SSS
S-S--S--------------------------------------------S----------S------------S-----
--------------S------------------------------S-S--------SS----------------------
-----------------------------------S------------S-------S-----S--S--------------
S-----------------------S-----S--------S---------S-------S-S--S--S--------S-----
SS-----------------S----S-------------------------------------------S-----------
--------------------------------------------------------------------------------
------------------------------------S---S---------------------------------------
--------------------------------------------------------------------------------
--------------------------S---------------------S------------S------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------SS-----------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
S-----------------------------------------------------------------------S-------
--------------------------------------------------S-----------------------------
----------------------------------------------------------------------------S---
-S-------------------------------------------------S-S---------S----------------
----------------------------------------------------------SSSS------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--S-----------------------SSS---------------------------------------------------
-----------SSS-SSSSSSSSS------------------------------S----SSSS-----------------
-----S---S---SS---S------------------S----------------------------------S-------
-------------------------------------------------------------------------------S
----------------------------------------------------------S---------------------
--------------------S----------------------SSS--S---------S------------S--------
---S-----------S-------S--S-----S--------S---------S----------------------------
--------------S-----------------------------------------------------------------
------------S------------------S-------------------S---------SSS--SSS-----------
------S------------S--------------S---------------S----------------S------------
---------------------------------------S--SS---------------------S--------S-----
------S------------------------------------------------------S-S----------------
-------S-----------------S--------S--------------------------S-------S----------
-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2311
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---------------------------------------------------CAGGGTTGTGGAGGGGTTTT---------
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>reverse_3907
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------------------------------------------------------------------TAGCAGCACTCAAA
GGCCAA--------------------------------------------------------------------------
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------------------------------------------------------------------
>forward_2312
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----------------------------------------------------AGGGTTGTGGAGGGGTTTTG--------
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>reverse_3990
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---------------------------------------------------------------------TGGGTGGGGGA
CAATTTCAG-----------------------------------------------------------------------
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>forward_2313
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-----------------------------------------------------GGGTTGTGGAGGGGTTTTGA-------
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>reverse_4431
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------------------------------TGCGGACATACAGGTATGCG------------------------------
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>forward_4425
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-----CTCGGAAGGTGTGTGAGGTC-------------------------------------------------------
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>reverse_5732
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---------------------------------------------------AACCGCTGCCCTTGGTTATC---------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------
