>input_sequence_29154
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---------------------------------------------------TAGATTTCTACGTGAGTGTAGCATTGCTC
TTATTTTACAGCCGCTGCGCCTGCTCTTCA-CGCCACCGCTTCCCATCGGCGGCAGCCCAAACCCCGGAACCCTCTCGGC
CAATGCCGGCGCCGCTCGCCGCCTCCTGGCGCCGGCATGCCTCCGCCGCGGCGTCCTCCTCCACTCCCAGGACCCTCCTC
TTGCTCGTCCCGGTTCTCATCCTCCTCGTCTTCGTCCTCTCCAGAGCCCCAGATCTCACCTTCGCCCCCGCCACTGCCGC
CTCACCCCACCTCCCGGCCCGGCTCCGCCCCTTCGACTGCTACGCCTCGCCGCAGGCCTCCCCGGTCTTGGCCAGCCTCG
TGGAGGGCGTGCCCCGCCCCTTCCTCTACTCCCTCGCCGACCTGGGGTCCCTCCCCGACCGCCCGCACCGGAACATCGCC
CGCCTCCTCAAGGGCAAGCGCTTCCGCAAGCCCGACATCTCCCAGACAATCCAGGAACTGCTCGCGGGGGAGGTGGGGAG
GGGCTCCGGCGGCGGGGTGGTGGTGGACGTCGGGGCCAATGTTGGGATGGCGGCCTTCGCGGCGGCAGTGATGGGGTTCC
GGGTGGTGGCATTCGAGCCGGTATTCGAGAACCTGCAGCGGATCTGCGACGGGGTGTACCTGAACCGGGTGCAGGACCAG
GTGGTGGTGTATCATGCTGCAGCATCTGACCGGGTTGGGAACATCACAATGCATAAGGTATCTTTCCTGCTTCAGATTGC
TCCGTTTAAAAGTTTATCAACTATCGC-ATTTTGGATTGCAGTACTAAGCA-------GTACTAACCAGATGTTTATTGA
TCGAGATGTACCTCGGGGAGCTGGATGAAGTATTGTGGTAAACTCAGATTGTGCTAGTTTGCCTCACCATCCTAATTACT
TAGGACAAGACCACCCATACAAATGTTTCGAGAACT------------------------------GTTGCACTCTTGCA
TCACCGGGAATTTGATCATTCACCCCGTATTAGATGGGCACTTGATCGTTTGCCTCACTTAG-----GCTTAAATGATTT
--CCCAATTTACTTAGATTTTATTATTATTTGCCATAATTATCCTTTTTGGGTATGTTCTATTAGAGGAAGTTCCTAAGG
C-TGTGATGCTCGTCCGCAAACATATGT---------GTCTGAATTTTTTCTTTTCCCTTACCATTGGATTTGGGATTAT
CCATGGTCTGGCAGTGCTATACTTTCTAAATGGAA-CATTTAGAAATAGAAAATGCCTTGTTCTTTAAACTAAATATTAA
ATCGGGAAATTTATCCTTGTCACTGGTGGAGCAGGGTTTACATGAAATTTTTTCCAGTTGCATGCTACTGGTTTATTATT
AAAGCATCAGCTTAACCTTTGTGTTACAGGACTTCTTTTTTATCTTGTGTTGTTAAAACTTCCATATATATCTATTAAAG
GTTGAGTTACTGGACTCACTAAACCAATGATGGGTAGCATAACCGACATTTAGGATCCAATGTATTCCATGTTGTGGAGT
GCCTTTTTTCGAGCAACCAACAGAAGCTCTGGCTCTTCATTAGTACAAAAAAGAGCTGACCAACTGATAATGGAAACCGG
CCAAATACTTACCCTTCCCTAGCTAGTTACTGTTAGAGGAGCAACTTTCAATAGGCCAAGGAGCGAATATATATTACATG
GTACTTGGAGTACAAAGTAAGGAAAGTTGGACTACTATGAATATGTAAGGAGACCTAGACCAATACTAATACTCCTTAAC
AGTTACAGACTACAGCAGAACTCATTCTGGCTAAAGTTATAACTTCCTGATTTGCCTGATGCACTTCTGGTTCATGCTGA
TAATATTTCAAACTGTCATGTCGAACCATTAGTGAATTCATTGCCACTTCCATATAAAGTGCAAACACCCCATTTGCAAA
TTAGTCTGACTTGCGTCACTTCTTGTGAAAACCTCAGATTGCTTTCT----CTTATAGATAATAATAATAATATTATTAT
TATTATTATATCTCAACAGCTTACTGTGAGTATTTTGGCAATGTAGGTGATCGGACGACTCGACAACAGTGCTATATCTG
CAACTGGTGCGAAGTTAGCATTCAAATCTAATGAAGAAGTTGCTGTCGAGGTTGCTACAATCCCATTGGATGAAGTCATT
CCAGATGCAGAGCGAGTGGTTCTGATCAAAATTGACGTTCAAGGTTGGGAATCTCATGTTCTGAGAGGTGCATCAAAGTT
GCTCTCGAGGAGGAGAGGTGAAGCTCCCTACCTTATATACGAAGAGGACGAGCGCCTGCTGCAGGCGAGCAACAGTAGTG
CACAAGAGATAAGGGCATTTCTTGGCAGTGTTGGTTACAATCAGTGTACGCGGCATGGGACGGATGCTCACTGTACAAAA
GAATAGACAAAGCTTTTTCTGCCTGGTGGTTGGACGCCCCTTAGCTGGGGATACATAGAACAGTCAAATAGGAAATCCTA
AGCTGTAAGTTTTCCCCTTATCTTAGGCAGCAGTTCAGATGCTCCATCCTTATAGTTTTCTCCTTGACTCCACGGTTTCT
GTTTATTTCTTTTAGGTTTGTTTGTTGATTGCTGGATCTTTTAACATCATATGCTATACATGCTTTGTCTAATGGCATTT
TAACGCATGCTTGTTCTCATTAACTTCATGTTTGTACTGTCAGTCTTAATGGATATTCCCTTGAAGTAATGAAATTCCTG
TGATTAA-------------------------------------------------------------------------
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>chr5A_1_TraesCS5A01G325300
TTTTTTAACATATAGAGTAAATTGGTA-TACGCAAGTATAAACTTTCACAAAGAAATGACATATGTGATATTCTAGACAA
AAATGACAAAATCGAAGGTACATTAAAAAACAAGTATTTGATGAATAGTGAGGTCTCAAAAAAAATTCCGCTAGAATACC
ACATGTGTCAATATTTCACGAACTTCAAGCTTGAGTAGAATGATCAACCAAATTTGATACTTCAAAATTTCAAGAATTTT
TATTTTATACAATAAA-TTTTAATTACTATTCATGTGGGG----------------------------------------
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-------------------------------------------------TTACGTGGTCTTTTTCTTCATTTCTTTGAAA
GAGTATATATGTTCCTAGCGTGAGGCTAGCCTTTTGTTAAAGACCAAAAATCGTGAGGCGAGCCTCGCTCGTTACTCCCT
TTATGAGCAATGCTACATCAATGAAGTATTACGGGCCTTTTACGAGGTAAACTTGAAGTGGCAATCTGTGATTGGACTAA
AAGAGGAGAGACGGCCCCATTCCTGAAAATCGAGGAGGGGAGGGGAGCAAAGTACTAGTTGGTTGGAAGGTTCGTGAATA
TCCTGTAATAAGCTTATCGATGTAGCATTTTCGCTCCCTTTATTTTACCAAATAATCCTACACACCTGAACCCATTACGG
ACTTTTACTTAATTTTCTTCTAACTAATCTCTCAGCCCCCTAATTTTCATTGGGAGTGAGGCCCAAAGAAAGTATCAGGT
GATACGAAGCCTTAGATGCTCTCATGATACGAGCTCCTAGGAGTCATTGGATCTGAGATCCAACGGCCCGGAAGGCTTTC
AACATTTTACGAAGAAGACCTTTTAAAGTCTAAAAATTACAAACAAGTAGGACAGCCTTTCAAAATTTCTTAGGAGCCGT
TGGATCTAAAATCCAAAGGACCAGAAGCTCGTATCATAAACATGATATCATCTGATATTTTCCCGTGAGGCCCAACCTCC
CCTCGTGTCTAATCCCAATCGCCCACGCGAGCTAGTCCGTGAACCCCGTAATAGATTTCTACGTGAGTGTAGCATTGCTC
TTATTTTACAGCCGCTGCGCCTGCTCTTCA-CGCCACCGCTTCCCATCGGCGGCAGCCCAAACCCCGGAACCCTCTCGGC
CAATGCCGGCGCCGCTCGCCGCCTCCTGGCGCCGGCATGCCTCCGCCGCGGCGTCCTCCTCCACTCCCAGGACCCTCCTC
TTGCTCGTCCCGGTTCTCATCCTCCTCGTCTTCGTCCTCTCCAGAGCCCCAGATCTCACCTTCGCCCCCGCCACTGCCGC
CTCACCCCACCTCCCGGCCCGGCTCCGCCCCTTCGACTGCTACGCCTCGCCGCAGGCCTCCCCGGTCTTGGCCAGCCTCG
TGGAGGGCGTGCCCCGCCCCTTCCTCTACTCCCTCGCCGACCTGGGGTCCCTCCCCGACCGCCCGCACCGGAACATCGCC
CGCCTCCTCAAGGGCAAGCGCTTCCGCAAGCCCGACATCTCCCAGACAATCCAGGAACTGCTCGCGGGGGAGGTGGGGAG
GGGCTCCGGCGGCGGGGTGGTGGTGGACGTCGGGGCCAATGTTGGGATGGCGGCCTTCGCGGCGGCAGTGATGGGGTTCC
GGGTGGTGGCATTCGAGCCGGTATTCGAGAACCTGCAGCGGATCTGCGACGGGGTGTACCTGAACCGGGTGCAGGACCAG
GTGGTGGTGTATCATGCTGCAGCATCTGACCGGGTTGGGAACATCACAATGCATAAGGTATCTTTCCTGCTTCAGATTGC
TCCGTTTAAAAGTTTATCAACTATCGC-ATTTTGGATTGCAGTACTAAGCA-------GTACTAACCAGATGTTTATTGA
TCGAGATGTACCTCGGGGAGCTGGATGAAGTATTGTGGTAAACTCAGATTGTGCTAGTTTGCCTCACCATCCTAATTACT
TAGGACAAGACCACCCATACAAATGTTTCGAGAACT------------------------------GTTGCACTCTTGCA
TCACCGGGAATTTGATCATTCACCCCGTATTAGATGGGCACTTGATCGTTTGCCTCACTTAG-----GCTTAAATGATTT
--CCCAATTTACTTAGATTTTATTATTATTTGCCATAATTATCCTTTTTGGGTATGTTCTATTAGAGGAAGTTCCTAAGG
C-TGTGATGCTCGTCCGCAAACATATGT---------GTCTGAATTTTTTCTTTTCCCTTACCATTGGATTTGGGATTAT
CCATGGTCTGGCAGTGCTATACTTTCTAAATGGAA-CATTTAGAAATAGAAAATGCCTTGTTCTTTAAACTAAATATTAA
ATCGGGAAATTTATCCTTGTCACTGGTGGAGCAGGGTTTACATGAAATTTTTTCCAGTTGCATGCTACTGGTTTATTATT
AAAGCATCAGCTTAACCTTTGTGTTACAGGACTTCTTTTTTATCTTGTGTTGTTAAAACTTCCATATATATCTATTAAAG
GTTGAGTTACTGGACTCACTAAACCAATGATGGGTAGCATAACCGACATTTAGGATCCAATGTATTCCATGTTGTGGAGT
GCCTTTTTTCGAGCAACCAACAGAAGCTCTGGCTCTTCATTAGTACAAAAAAGAGCTGACCAACTGATAATGGAAACCGG
CCAAATACTTACCCTTCCCTAGCTAGTTACTGTTAGAGGAGCAACTTTCAATAGGCCAAGGAGCGAATATATATTACATG
GTACTTGGAGTACAAAGTAAGGAAAGTTGGACTACTATGAATATGTAAGGAGACCTAGACCAATACTAATACTCCTTAAC
AGTTACAGACTACAGCAGAACTCATTCTGGCTAAAGTTATAACTTCCTGATTTGCCTGATGCACTTCTGGTTCATGCTGA
TAATATTTCAAACTGTCATGTCGAACCATTAGTGAATTCATTGCCACTTCCATATAAAGTGCAAACACCCCATTTGCAAA
TTAGTCTGACTTGCGTCACTTCTTGTGAAAACCTCAGATTGCTTTCT----CTTATAGATAATAATAATAATATTATTAT
TATTATTATATCTCAACAGCTTACTGTGAGTATTTTGGCAATGTAGGTGATCGGACGACTCGACAACAGTGCTATATCTG
CAACTGGTGCGAAGTTAGCATTCAAATCTAATGAAGAAGTTGCTGTCGAGGTTGCTACAATCCCATTGGATGAAGTCATT
CCAGATGCAGAGCGAGTGGTTCTGATCAAAATTGACGTTCAAGGTTGGGAATCTCATGTTCTGAGAGGTGCATCAAAGTT
GCTCTCGAGGAGGAGAGGTGAAGCTCCCTACCTTATATACGAAGAGGACGAGCGCCTGCTGCAGGCGAGCAACAGTAGTG
CACAAGAGATAAGGGCATTTCTTGGCAGTGTTGGTTACAATCAGTGTACGCGGCATGGGACGGATGCTCACTGTACAAAA
GAATAGACAAAGCTTTTTCTGCCTGGTGGTTGGACGCCCCTTAGCTGGGGATACATAGAACAGTCAAATAGGAAATCCTA
AGCTGTAAGTTTTCCCCTTATCTTAGGCAGCAGTTCAGATGCTCCATCCTTATAGTTTTCTCCTTGACTCCACGGTTTCT
GTTTATTTCTTTTAGGTTTGTTTGTTGATTGCTGGATCTTTTAACATCATATGCTATACATGCTTTGTCTAATGGCATTT
TAACGCATGCTTGTTCTCATTAACTTCATGTTTGTACTGTCAGTCTTAATGGATATTCCCTTGAAGTAATGAAATTCCTG
TGATTAAGATTCT-AAATCTATGCTTGCTAAACATCCTCAGTTATACCATAAATTTAATATTTTGCCCGTTCATCTTGGA
GCATTTGAGGATTGGCCACATATCGAAAACTCAAATGCACTTAAGTGCAGCAGCAGCGATTCCTCTTGGATTTGGCTTCA
CCTGCGTCTTGCGAAGCATGTACGCACTTTTGTTT--GAGCTGAATAGTTATGGATTTGAATGCTAACTTCACGCCATGT
CCTTCGTTATAGATCAGTTATTTCTGCTGGCTGTCAGTTGCCTGAATTATACCTTCGTTATAAATCAATTATTGCAAAGA
CGGTTGTTATTCAATAGAGTAATTTATTTAATTCCCAGATTAGTTTGGATATGCACATGTTAATTCCAGATTTGCATGGA
AATTTTGTACTCATAACTTGGTCGCCTACATCTACCAATTCGGGTTTCATCCCTTGTGAAGAGGAATGAGACTACGGTAG
GTCGCATGGCTCGAGGACATAGAGCGCGAAGCACTGGAAAGAACCAGGGAAGAAGAGAAGGAAGCCACACCCACCACAAG
CAGTCACCAGGATCAAAGTTGAGCAAGAGATCATCAATTTGTCAGTCTCGTCAGATGACGAGGAGGATCATCAAGCTCGA
ACTCATCAATGTGTACAAGGGCCATCTACCTGTACTCCTTCCATTCCTAAATATAAGTCTTTTTAGAGATTTCTATATCG
ATTACATACGGATGTATATAGATGTATTTTAGAGTGTAGATTCCCTCATTTTGCTTCGCATGTAGTTCATATTGAAATCT
CTAAAAGGCTTATATTTAGAAACGGAAAGGATGGATTATTCCTGTTGAGAAATTAATGGAAAGGGGTAGTGGTGTAGTGC
CCGGTTGAAAAAACACACTAAGGCCATTACACGAACCGTGCTGGTGGAACCAGGAACCAGTATCTACCGGTGGGAAATCC
ACCATCTAGATCCGTGCTGGTGGAACCCATAAGATTTTTTTTTTCCACCT
>chr5D_1
TTTTTTCACATACGCAGTCAATCGGTAATACTCATATATAAACTTTCAAAAAAAAATGACATCTACGATATTCTAGGAAA
AAATGACAAAATCGAAGCTACATT-AAAAACAAGTATTTGATGAATACTAAGGTCTCAGATATTTTTT------------
--ATGTGTCAATATTTCACGAACTTCAAGCTTGGGTAGAATGATCGACCAAATTTGATACTTCAAAGTTTCCGGATTTTT
AAATTTTTTCTATAACTTTTTAATTACTATTCATGTGGGTGCAAGCGGAACCATGTTGACATTTGTACTTGGCGACTGCT
AGGCGTAAACCGGATGATCCTGGAAAAGGATAAGCCGCCTTGCCAGCCGTCGATTCATCACGATTAGGACCGTTTGATCC
TCGTGTTGAGTTGACCACGCCATCGCTCCGTTCCCATGTCTATAACGGTTGCGTCAGTTGCAAAAGTAGCACACGCTCGC
GCGTAGCTCCGACGGGGACATCAGCTCGCCGATCCGTAGCACATGATTGCAGCAGCCACGCCGGCAAGCTTGCCGCCACA
GAGCCGTCGAGTGACTCCGGCGAGCAACCGTGACAGGCCAGCTCGACATGCCCCAGCCATGCTGAAACGCAGCACTGCCG
AGCGGCCGCGCCATCCTGCAACGCAGCATTGCTGAGCTGCCGCGCCATGTCAGCTCGTAGCGACACGCCGGCGAGCTCAC
CACACCCCTACCATGCTGCAACGCAGCACTGCCGAGCGGCCATGCCCGGCCAGCTCGTAGCGAGACGCCGACGAGCTCGC
CACTCCCTGACCATGCTGCAACGCAGCACCGACGAGCGGCCGCTCCCGCGTCCGGCCAACTCGTACCGAAACGACGGCAA
GCTCGCCATGCCCCGAGCATGCTGCAACGCCGGCGACGAGGTCTTCATTGCAGCACCGGCGAGCGCTCCATTGCAGCACT
GGTGGACGACAACGACGGCGTCATTAAAGCACTCGGCTGCCGGGCAACGAGGCCTTTCATCGCAGCACCAGTGGCCGGCA
AGCGCTCCATTGCAGCGCCGACGAGCGCTCCATTGCAGCGCTGGACGAAGCACCGACGAGCGCTCATTGCAGCGGCGGCG
AGCACCCCATCGCAGCACTGGTGGACGGCGAGGAGGGCTTCATTGTACAGCACCTGGCGGTCGGCGACGGGGGCTTTCAT
CGCAGCCCCGGTGGCCGGGAAGCGCTGCATTGGAGCGCCGATGAGTGCTCCATTGCAGTGCCGGGAGGAGGCGCCAGCAA
GCTCTCAGTCATTGCAGTGCCGGTAACTGCTCCATTGCATCGCCGGGAGCGCTCCATTGCAGCTCCGCCACCCCAAGACT
TGCAGCGGTGGCCGGTGGGTGAGAAAACATGGAGTGGGCAGAAAGGGGATCACGCGGTGGAGAAGAAAGACTAGGCTGAT
GTGTGGAGGAGGCTTCACAGCCAAAGGATAAGGCCGACGGGGAGCATTGTGTGGGCCCAATAGGGAACACGCGTCGTGCG
GGAGGAGAGGTTTACGCGAGAGATAAATCAGTCGGTCGAAACAGATCATTTACGTGGTCTTTTTCTTCATTTCTTCGAAA
GAGTATATATGTTCCTAGCGTGAGGCTAGCCTTTTGTTAAAGACCAAAAATCGTGAGGCGAGCCTCGCTCGGTACT----
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TTATTTTACAGCCGCTGCGCCTGCTCTTCACCGCCACCGCTTCCCGTCGGCGGCTGCCCAAACCCCGGAACCCTCTCGGC
CAATGCCGGCGCCGCTCGCCGCCTCCTGGCGCCGGCATGCCTCCGCCGCGGCGTCCTCCTCCACTCCACGGACCCTCCTC
TTGCTCGTCCCGGTTCTCATCCTCCTCGTCTTCGTCCTCTCCAGAGCCCCAGATCTCACCTTCTCCCCCGCCACTGCCGC
CTCGCCCCGCCTCCCGGCCCGGCTCCGCCCCTTCGACTGCTACGCCTCGCCGCAGGCCTCCCCGGTCTTGGCCAGCCTCG
TGGAGGGCGTGCCCCGCCCCTTCCTCTACTCCCTCGCCGACCTGGGGTCCCTCCCCGACCGCCCGCACCGGAACATCGCC
CGCCTCCTCAAGGGCAAGCGCTTCCGCAAGCCCGACATCTCCCAGACCATCCAGGAACTGCTCGCGGGGGAGGTAGGGAG
GGGCTCCGGCGGCGGGGTGGTGGTGGACGTCGGGGCCAATGTTGGGATGGCGGCCTTCGCGGCGGCCGTGATGGGGTTCC
GGGTGGTGGCATTCGAGCCGGTCTTCGAGAACCTGCAGCGGATCTGCGATGGAGTGTACCTGAACCGGGTGCAGGACCAG
GTGGTGGTGTATCATGCTGCAGCATCTGACCGAGCTGGGAACATCACAATGCATAAGGTATCTTCTCTGCTTCAGATTGC
TCCGTTTAAAAGTTTATCAACGACGGTGATTTTGGATTGCAGTAGTAAGTATAGTACTGTACTAACCAGATGTTTATTGA
TCGAGATGTACCTCGGGGAGCTGGATGAAGTACTGTGGTAAACTCAGATTGTGGTTGTTTGCCTCACCATTCCAATTACT
TGGGACAAAACTACCCATAGAAATGGTTGGAGAACTGTTGAAGTGAATCTA--AGTTAAGGTGGAAGTTGCACTCTTGCA
CAGCGGGGAATTTGATCATTCACCCTGTATTAGATGGGCACTTGATCGTTTGTCTCACCTTACTCAAGCTTAAAAGATTT
GCCCCACTTTACTTGGATTTT-GTATTATTTGCCCTTATTATCCTTTTCCGGTCTGTTCTATTAGAGGAAGTTCCTAAAT
C-TGTGATGCTCATCCACAAATATATGTCAATTAGTCTGATGCTCA--------------------------------AT
TTATAGTCTGACAGTGCTATGCTTTCTAAATGGAGTCATCTAGAAAAAGAAAATGTCTTGTTCTTTAAACTAAATATTAA
ATCTGGCAAGTTATCCTTGTCACTGGTGGAACAGGGTTTACATGAAAAGTTTTCCAGTTGCTTGCTACTGGTTTATTATT
AAAGCATCAGCTTAACCTTTGTGTTACAGGACTTCTTTTTGATTTTGTGTTGTTGAAACTTTCATATATATCTATTAAAG
GTCGAGTTACTGGACTCACTAAACCAATGATGGGTAGCATAACCGGCATTTAGGATCCAATCTATTCCATGGCGTGGAGT
GCCTTTTTTCGAGCAACCAACAGGAGCTCTGGCTTTTCATTAGTACAAAAAAGAGCTGACCAACTGATAATGGAAACCGG
CCAAATACTTACCCTTCCCTAGCTAGTTACTGTTAGAGGAGCAACTTTGCATAGCCCAAGGAGCGACTATATATT-----
-----------ACAAAGTAAGGAAAGTTGGACTACTACGAATATGTAAGGAGAC----ACCAATATTAATACTCCATAAC
AGTTACAGACTACAGCGGAACTCATTGTGGCTAAAGTTATAACTTCCTGATTTGCCTGATGCACTTCTGGTTCACGTTGA
CAATATTTCAAACTGTCATGTCGAACCATTAGTGAATTCATTGCCGCTTTCATATA-AGTGCAAACACCCCATTTGCAAA
TTAGTCTGACTTGCGTCGCTTCTTGTGGAAATCTCAGATTGCTTGCT----CTTATAGATAATATT----------TTTT
TATTATTATATCTCAACAGCTTACTGTGAGTATTTTGGCAATGTAGGTGATTGGACGACTCGACAACAGTGCTATATCTG
CAACTGGTGCGAAGTTAGCATTCAAATCTAATGAAGAAGTTGCTCTTGAGGTTGCTACAATCCCATTGGATGAAGTCATT
CCAGATGCAGAGCGAGTGGTTCTGATCAAAATTGATGTTCAAGGTTGGGAATCTCATGTTCTGAGAGGTGCATCAAAGTT
GCTCTCAAGGAGGAGGGGTGAAGCTCCCTACCTTATATACGAAGAGGACGAGCGCCTGCTGCAGGCGAGCAACAGTAGTG
CACAAGAGATAAGGGCATTTCTTGGCAGTGTTGGTTACAATCAATGTACACGGCATGGGACGGATGCTCACTGTACAAAA
GAATAGACAAAGCC-TTTCTGCCTGGTGGTTGGACGCCCCTCAGCTGGGGATACATAGAACAGTCAAATAGGATATCCTG
AGCTGTAAGTTTTCCCCTTATCTTAGGCAGCAGTTCTGATGCTCCATCCTTATAGTTTTCTCCCTGACTCCACGGTTTCT
GTTTATTTCTTATAGGTTAGTTTGTTGATTGCTGGATCTTCTAACATCATATGCTATACATGCTTTGTCTAATGGCATTT
TAACGCATGCTTATTCTCATTAACTTCATGTTTGTATTGTCAGTCTTAATGGATATTCCCTTGAAGTAATGAAATTCCTG
TGATTGTGATTCTAAAATCTGTGCTCGCTAAACATCCTTAGTTATACCATAAATTTAATCGTTTGCCCCTTCATCTTGGA
GTATTTGAGGATTGGCCGCATATCGAACCCTCAAATGTACTTAAGTGAGGCAGTAGCGATTCCTCTTGGATTTGGCTTTA
CCTCCGTCTTGCGAAGTATGTATTCACTTTTGTTCAGGAGCTGAATAGTTATGGATTTGAATGCTAACTTCACGCATGAC
CTTC----------------------------------------------------------------------------
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>chr5B_300
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----------------------------------------------------------------------TTCTTCGAAA
GAGTATATTTGTTCCTAGCGTGAGCCTAGCCTTTTGTTAAAGACCAAAAATCGTGAGGCGAGCCTCGCTCGGTACT----
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TTATTTTACAGCCGCTGCGCCTGCTCTTCACCGCCGTCGCTTCCCATCGGCGGCCGCCAAAACCCCGGAACCCTCTCGGC
CAATGCCGGCGCCGCTCGGCGCCTCCTGGCGCCGGCATGCCTCCGCCGCGGCGTCCTCCTCCACTCCACGGACCTTCCTC
TTGCTCGTCCCGGTTCTCATCCTCCTCGTCTTCGTCCTCTCCAGAGCCCCAGATCTCACCTTCTCCCCGGCCACTGCCGC
CACGCCCCGCCTCGCCGCGCAGCTCCGCCCCTTCGACTGCTACGCCTCGCCGCAGGCCTCCCCGGTCTTGGCGAGCCTCG
TGGAGGGCGTGCCCCGCCCCTTCCTCTACTCCCTCGCCGACCTGGGGTCGCTCCCCGACCGCCCGCACCGGAACATCGCC
CGCCTCCTAAAGGGCAAGCGCTTCCGCAAGCCCGACATCTCCCAGACCGTCCAGGAGCTGCTCGCGGGGGAGGTAGGGAG
GGGCTCCGGCGGCGGGGTGGTGGTGGACGTCGGGGCCAATGTTGGGATGGCGGCCTTCGCGGCGGCCGTGATGGGGTTCC
GGGTGGTGGCATTCGAGCCGGTCTTCGAGAACCTGCAGCGGATCTGCGACGGGGTTTACCTGAACCGGGTGCAGGACCAG
GTGGTGGTGTATCATGCTGCAGCATCTGACCGAGTTGGGAACATCACAATGCATAAGGTATCTTCTCTGGTTCAGATTGC
TCCGTTTAAAAGTTTATCAACGATGGTAATTTTGGATTGCAGTAGTAAGTA-------GTACTAACCAGGTGTTTATTGA
TCGAGATGTACCTCGGGGAGCTGGATGAAGTATTGTGCTAAACTCAGATTGTGCTTGTTTGCCTCACCATCCGAATTACT
TGGGACAAAAATACCCATAGAAATGGTTGGAGAACTGTTGAGGTGAATCTATGAGTTAAGGTGGAAGTTGCACTCTTGCA
TCACGGGGAATTTGATCATTCACCCCGTATTAAATGGGCACTTGATCGTTTGCCTCACCTTACTCAAGCTTAAAAGATTT
GCCCCACTTTACTTAGATCTT-TTATTATTTGCCCTAATTATCCTTTTCCTGTATGTTCTATTAGAGGAAGTTCCTAAAT
CTTGTGATGCTCATCCACAAATATATGTCAATTTGTAGTCTGAACTTTTTCTTTTCCCTTGCCATTGGATTTGGGGTTAT
TCATGGTCTGACAGTGCTATACTTTCCAAATGGAGTCATTTAGAAATAGAAAATGCCTTGTTCTTTAAACTAAATATTAC
ATCTGGCAAGTTATCCTTGTCACTGGTGGAACAGGGTTTATATGAAAAGTTTTCCAGTTGCGTGCTACTGGTTTA-----
--------------------------------------------------------------------------------
---------------------AACCAATGACGGGTAGCATAACCGACATTTAGGATCCAATCTATTACATGGCGTGGAGT
GCCTTTTTTCAAGCAATCAACAGGAGCTCTGGCTCTTCATTAGTACAAAAAAGAGCTGACCAACTGATAATGAAAACCGG
CCAAATACTTACCCTTCCCTAGCTAGTTACTGTTAGAGGAGCAACTTTGCATAGCCCAAGGAGTGAATATATATTACATG
GTACTTGGAGTACAAAGTAAGGAAAGTTGGACTACTACGAATATGTAAGGAGACCTAGACCAATATTAATACTCCTTAAC
AGTTGCAGACTACAGTGGAACTCATTCTGGCTAAAGTTATAACTTCCTGATTTGCCTGATGCACTTCTGGTTCACGCTGA
TAATATTTCAAACTGTCATATCGAACCATTAGTGAATTCATTGCCACTTTCATATA-AGTGCAAACACCCCATTTGCAAA
TTAGTCTGACTTGCGTCACTTCTCGTGGAAATCTCAGATTGCTTGCTCTTTCTTATAGATAATGTT----------TTAT
TATTATTATATCTCAACAGCTTACTGTGAGTATTTTGGCAATGTAGGTGATTGGACGACTCGACAACAGTGCTATATCTG
CAACTGGTGCGAAGTTAGCATTCAAATCTAATGAAGAAGTTGCTGTCGAGGTTGCTACAATCCCATTGGATGAAGTCATT
TCAGATGCAGAGCGAGTGGTTCTGATCAAAATTGATGTTCAAGGTTGGGAATCTCATGTTCTGAGAGGTGCATCAAAGTT
GCTCTCAAGGAGGAGAGGTGAAGCTCCCTACCTTATATACGAAGAGGACGAGCGCCTGCTGCAGGCGAGCAACAGCAGTG
CACAAGAGATAAGGGCATTTCTTGGCAGTGTTGGTTACAATCAGTGTACGCGGCATGGGACGGATGCTCACTGTACAAAA
GAATAGACAAGCA-TTTTCTGCCTGGTGGTTGGACGCCCCTCAGCTGGGGATGCATAGAACAGTCAAATAGGATATCCTG
AGCTGTAAGTTTTCCCCTTATCTTAGGCAGCAGTTCAGATGCTCCATCCTTATAGTTTTCTCCTCGACTCCACGGTTTCT
GTTTATTTCTTTTAGGTTAGTTTGTTGATTGCTGGATCTTTTAACATCATATGCTATACATGCTTTGTCTAATGGCATTT
TAACGCATGCTTGTTCTCATTAACCTCATGTTTGTACTGTCAGTCTTAATGG-TATTCCCTTGAAGTAATGAAATTCCTG
TGATTGTGATTCTAAAATCTATGCTCGCTAAACATCCTTAGTTATACCATAAATTTGATCGTTTGCCCTTTCATCTTGGA
GTATTTGAGGATTGGCCGCATATGGAACCCTCAAATGCACTTAAGTGCAGCAGCCGCGATTCCTCTTGGATTTGGCT---
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>chr6B_1060
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-------------------------------CGCCATCGCTTCCCATCGGCGGCCGCCCAAACCCCGGCACCCTCTCGGC
CAATGCCGGCGCCGCTCGCTACCTCCTGGCGCCGGCATGCCTCCGCCG-GGCGTCCTCTTCCACAACACGGACCCTCCTC
TTGCTCGTCCCGGTCCTCATCCTCCTCGTCTTCATCCTCTCCAGAGCCCAAGATCTCACCTTCTCCCCCGCCACTTCCGC
CACGCTCCGCCTCGCCGCCCAGCTCCGCCCCTTCGACTGCTACGCCACGTAGCAGTCCTCCCTGGTCTTTGCCAGCCTCG
TGGAGGGTGTGCCCCG-CCCTTCCTCTACTCCCTCGCCAACCTGGGGTCGCTCCCCGACCGCCCGCACCGAAACATCGCC
CGCCTCCTCAAGGTCAAGCGCTTCCGCAAGCCCGACATCTCCCAGACCATCCAGGAGTTGCTTGCGGGGGAGGTAGGGAG
CGGCTCTA--------------------------------------------------GCGGCGGCCGTGATGGGGTTCC
GGGTGGTGGCATTCGAGCCGGTCTTCGAGAACCTGCAGCGGATCTGCGATGGGGTGTACCTCAACCGGGTGCAGGACCAG
GTGGTGGTGTATCATGCTGCAGCATTTGACCGAGTTGGGAACATCACAATGCATAAGGTATCTTTCCTTCTTCAGGTTGC
TCCGTTTGGAAGTTTATCAAC-----------------------------------------------------------
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>SNPs
------S-----SSS---S---S--------S--SS------------S---S---------S-SS----------SS--
-----------------S------S----------------------S-S--------S-S-SSS--SSSSSSSSSSSSS
SS-------------------------------S-----------S--------------------S----SS--S----
S-S---S-S-S----S-----------------------S----------------------------------------
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---------------------------------------------------------------------------S----
-----------------------------------------------------------------------S----SSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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---S----S-----------------------------------------------------------------------
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---------------------S--S-S-----------------S----S------------------------------
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---------------------------S---S------------S-------------------S-SSSSSSSSSS----
---------------------------------------------------S----------------------------
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SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_2192
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------------CCAAAGGACCAGAAGCTCGT------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3969
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------------------------------------------------CAATAGGCCAAGGAGCGAAT------------
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>forward_2267
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-------TCTAATCCCAATCGCCCACG-----------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4217
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--------------------------------------------------------AAGTGCAAACACCCCATTTG----
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>forward_3453
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-------------------------------------------------------------------------TCCTAAG
GCTGTGATGCTCG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_4372
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---------------------------------------------------CGGACGACTCGACAACAGTG---------
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---GTGATGCTCGTCCGCAAAC----------------------------------------------------------
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>reverse_4567
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------GAGGAGGAGAGGTGAAGCTC------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------
>forward_4155
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------------------------------------------------------CCTGATGCACTTCTGGTTCAT-----
--------------------------------------------------------------------------------
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>reverse_5510
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---------------------------------------------------------------------GACTACGGTAG
GTCGCATGG-----------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
