>input_sequence_28931
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--------------------------------------------------ATGTCTGACAGCGAGAAAGAGGTGCCAGTG
GAAGTGG---AAGAAGGCGCCACCCGCGGGGCCGACTGGGAGGTCGTCACGCTCACCGCGTCCACCTACGCCGCCGCGCC
CAGCGGGCCAGAAGGAGCAGCAGAGGGCAAGAGGCTCGGCGACGGCAACGACGGCCGCGCCTCGTCCACCACGCTGCTCA
TGTCGGACCACTTCGTGTTCCCACCCAGCGAGCACGAGAACCTGCCCATAGAGACCGCCCTGCTCGACCCGCCTCAGGAG
AGCACCAGCGTGGACGACGCCGGCTTCAAGAACGTCGGTGGGGGCTACGATGATGGGTCCGAGACGGTCAAGTACTATGA
CGAGGGGAAGAGCCTGTCGGTGCATGATGCCGAGATGATGATGGGTGACGTGGCTGAGTTCCACGCCCAAGATGACGGAC
GCGGTTACGTTGTCCATGATGATGATGATGAC---TCCCAGGACAAGTCTGATGCGCCTCTGGA---------CAGCAGC
AGCAGCAAGGGCC---GTGGCTCTGGTGCCCCCTGCCAGTGCTGGTTGAAGAAGCACATGTCATGCCTGTATGACCAGGC
CAAGGAGACCAATCATCTCTGGGGTGCGGTTGTCGTGGCTGCCCTGGTTGGCCTTGTCATCTTGTGGCGCAAAGACAAGT
TGCACATGAGCTGCCTTAAATGGCGCTCTCGCTCGGCAGTCAGGTATGTACACATTGAGCTAT-TGTCTCTTTTCAACTA
TGATTCATATTTCT-ATGGTCGACTCAATATTGTATTGC-------ATGTTTTGGAAATAATATCCAGTCTATCTCTTTC
CG--TACTTAGCAGTGTACATTACAGTTGTTGAA----TATGGTCAGTAGTGTGCGTGTTAGTTGCTTGCTCTGTTG---
-------CTTTACTCTGTC-----------CTCAGCACGTGCTCAGCTTACTGTTTCTTTCTGCAGTACTAGACAAATCC
ATTTTGTGCAGTAAGCTACTCTTTTCTGATTTTCCTTACTCAATTATGTGCCTGAAAACTCATTGAACTCCCTGTTACAC
CTCCTGATCTTTTATCATGGCCCTGCACCTCTCCCCACTGTTAGAACATCACGTGCACATGCTTCCTGAAATTACGTATG
TGCATTGATATCTTTTCTTTGTTAATAAGTTAGTGGGGCGTAACTATTGATGGTA-TTTTAGAGATATAATGGGGCATGA
TTAAAATTGAGCAGTACAAGAATTGTTTGAATAGTTCATTAGTTATGAAATCGTGAGATGTCATGTTGGTTTTGATATGG
ATTATGTATTAAATATCCACACCAGCCACTGATTTTGCTTCATTTGGCATGAACTGTATGTACACTGCTAAATACTGATT
ATGTATTAAATAGTATAGATAACGAGTTGATTTTTTGCTGCTATTTTTATTGATGTTCATTATTGCATAAAGAACAGCAA
ATTGGATTTGAGTCAGATTTCACTTTGGCTTAGTATGAATTATGAAGTAGTG-----ACTATTAAATATTCCAACCTATC
ATTTTAAGTATTGTCACTGATGTGCATATTACTGTTGCTTTGAGCAGTACTAGCAGT-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACCCCCTGT
TACATCTCCTGGGCAGTTTTTTCCTTTATCATGGCCCAGCATCTCCCCCAGTTAGCAGGGCGTAGTTTTTGTTTAAATGT
TATAGAGGTGTTGTGTGGCATGTTTAAAATGAGCAGGAGAAGAAC------TGTTGGGATAGCTGACTACTTACGAAATT
GTGACTTGTGAGATGCAGCTTTGGTTTCAGTATGAATTACGTATTAAATATTTTTCACACCACCCACTGATTTTGCTTCA
TTTAGCATGACCTTAGTATGGATAATGAGGTAACTTTTCAGTTGCTATTTTTACCCACGTTCAGTATTGCATAGCAGACA
GCAAAAATCCATCCGTTTACAGCAAAGTAGGATTTGACCCAGATTTCGCTTTGGTTCAGTATGAACTACGAAACAGTGAC
TGTTAAATATTCACACCAATCACTGATTTTTCTGAACTTGGAACGAACTTAGTACGGATAATGAGATTTTCTTTTTGGTT
GCTACCTTTTGAAGTTGGTATGGATACCATCCTTTTACAGTTTA---------TTATATGGTACATAAAGTGGTATTCTT
ACCCATTTTTTATGATGTGAGTGGTTAGTCTGCGTAAAAGTGGTGGATGCTATTTCAGCACCTTAGATATCAAGATAGTT
TACACCGGCAGTGTGCCAAGTTTCTCTCTTTTGCAACATTAGGATACCCAGTTCTCATCTCTATCTGATTCAA-CATGTT
TGCTGTCACGTTTATATTTACAGTGGAATACTCCGTAATATCATTTCTTAAACTTGTATGCAGTCAGTAAATTGGTTCTT
GTCATT-AACATTGTGAACATATCATCGTCAGTATCATATGAGA------------------------------------
--------------------------------------------------------------ACCTTCTTGTATTAACAT
TTTTGTATCTCATCATCA--TTTAGTTTGTTTACACGTCTTCTATGTGCG-------AAACATACAGTTCACCTAGGTTC
TTAACCTGTAACAGCGTCCTAACTGTTCAGACTGTTTGCTTTAACAAGCTATCTA-GTAAAAAGCTTGATAGTGATAG--
----GTATATTACCTTCTTTCTCATGT---------------------------TTCTATTATATTAGCGCACACTGATA
TTGTCTTGATGACAAAATATATATCAGAGACGATAATTCCTGATATCCGCTGCCTTCTGTGAATCGTTATG-TTTTTGTT
GCTGACTGAGGTTCTGTTCTGTTGTTCAGTTAA-----------------------------------------------
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>chr2B_1_TraesCS2B01G022700
CTTGTCGGTAAGGTAAGCCCTCGGTCGGATCGGGTCGGATCGACCCC--------------CCTCCTTCTCCTCCATCTC
CTCTGGTGTGGTCTGGTTGTGCTTGTGCGCCGCGGATGGATCTGATCCACACACCCACCCACCCACGTCTCCTCCGCGAC
CAAGAAAGAAATCCCT-------------------------------------------TCCTTCCTTCCTTCCTTCCTT
CCCTG--AGTATGTATGTATGATTGATTGATTGATTCGGATGTGCTGAGGTCCGTCGTAGCC------------------
--------------------------------------------TGATGCAATAACTATGTGCCATTCTTTCTTTCTTTC
TTTCTTTTCTCCTCCCTCCCTGAGTCCCTCTGTATGTATCTATCTATCTATCTATGTCCGCTCTCTGGTTTGGTTTGCTA
AGAGTCATAGATGAT--------------GAGGGGAGGGGATTCATACAAAGTCTTAGTCTTTTTTACTTATCTGTTTCT
TTCTACTCCCTCCCTTCTAAAATAGATAAAAGCTTTGTTTGGGGAAAGAAATGGATATCTCTGTTTGCTTGATAGAATAG
---ATTATTAATCCCTGCTTTCCTTTTTCTTTTCTGCCTACTCATGCCTCTGCCTCTGCCTCTGCCTCTGCTTGCCTGTC
TCTCATGTTTACTTACATGATGATGATGATGATGATGATGATGATGATGATGATGATGCGGTCACCCATTCTCCCTCCCC
ACCTCTGCTCTGCTCTTGTACCACCCATCAAATTC-----CTCTTCTCTTTAACGATATGATGATGATATTGCTCTTCCT
ACATTTTGGGTGGTTTGGATCAATGTATGCTCACTC-------TCATAGCCATGTCCTCCTTACCCTCTAATTAAATAGC
C------------------ATGCTTTCTTTTACTGCACG--------TCACAGATGAGCGGGCAGGGCTTGA-----TTC
ACCCTACTTGCTGCTCTATCATGCAACTGACTGACTATCTGTCTGTCTGTCTGTATGACA--------------------
-------------------------------------------------TTTACGTGATGCCGTCGATTATCCAACATTC
TGTCCGTTATGCTGAAGCTGCTCATCTGCAAATAACCAGGTTCTGTGGCCATGTCTGACAGCGAGAAAGAGGTGCCAGTG
GAAGTGG---AAGAAGGCGCCACCCGCGGGGCCGACTGGGAGGTCGTCACGCTCACCGCGTCCACCTACGCCGCCGCGCC
CAGCGGGCCAGAAGGAGCAGCAGAGGGCAAGAGGCTCGGCGACGGCAACGACGGCCGCGCCTCGTCCACCACGCTGCTCA
TGTCGGACCACTTCGTGTTCCCACCCAGCGAGCACGAGAACCTGCCCATAGAGACCGCCCTGCTCGACCCGCCTCAGGAG
AGCACCAGCGTGGACGACGCCGGCTTCAAGAACGTCGGTGGGGGCTACGATGATGGGTCCGAGACGGTCAAGTACTATGA
CGAGGGGAAGAGCCTGTCGGTGCATGATGCCGAGATGATGATGGGTGACGTGGCTGAGTTCCACGCCCAAGATGACGGAC
GCGGTTACGTTGTCCATGATGATGATGATGAC---TCCCAGGACAAGTCTGATGCGCCTCTGGA---------CAGCAGC
AGCAGCAAGGGCC---GTGGCTCTGGTGCCCCCTGCCAGTGCTGGTTGAAGAAGCACATGTCATGCCTGTATGACCAGGC
CAAGGAGACCAATCATCTCTGGGGTGCGGTTGTCGTGGCTGCCCTGGTTGGCCTTGTCATCTTGTGGCGCAAAGACAAGT
TGCACATGAGCTGCCTTAAATGGCGCTCTCGCTCGGCAGTCAGGTATGTACACATTGAGCTAT-TGTCTCTTTTCAACTA
TGATTCATATTTCT-ATGGTCGACTCAATATTGTATTGC-------ATGTTTTGGAAATAATATCCAGTCTATCTCTTTC
CG--TACTTAGCAGTGTACATTACAGTTGTTGAA----TATGGTCAGTAGTGTGCGTGTTAGTTGCTTGCTCTGTTG---
-------CTTTACTCTGTC-----------CTCAGCACGTGCTCAGCTTACTGTTTCTTTCTGCAGTACTAGACAAATCC
ATTTTGTGCAGTAAGCTACTCTTTTCTGATTTTCCTTACTCAATTATGTGCCTGAAAACTCATTGAACTCCCTGTTACAC
CTCCTGATCTTTTATCATGGCCCTGCACCTCTCCCCACTGTTAGAACATCACGTGCACATGCTTCCTGAAATTACGTATG
TGCATTGATATCTTTTCTTTGTTAATAAGTTAGTGGGGCGTAACTATTGATGGTA-TTTTAGAGATATAATGGGGCATGA
TTAAAATTGAGCAGTACAAGAATTGTTTGAATAGTTCATTAGTTATGAAATCGTGAGATGTCATGTTGGTTTTGATATGG
ATTATGTATTAAATATCCACACCAGCCACTGATTTTGCTTCATTTGGCATGAACTGTATGTACACTGCTAAATACTGATT
ATGTATTAAATAGTATAGATAACGAGTTGATTTTTTGCTGCTATTTTTATTGATGTTCATTATTGCATAAAGAACAGCAA
ATTGGATTTGAGTCAGATTTCACTTTGGCTTAGTATGAATTATGAAGTAGTG-----ACTATTAAATATTCCAACCTATC
ATTTTAAGTATTGTCACTGATGTGCATATTACTGTTGCTTTGAGCAGTACTAGCAGT-----------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------ACCCCCTGT
TACATCTCCTGGGCAGTTTTTTCCTTTATCATGGCCCAGCATCTCCCCCAGTTAGCAGGGCGTAGTTTTTGTTTAAATGT
TATAGAGGTGTTGTGTGGCATGTTTAAAATGAGCAGGAGAAGAAC------TGTTGGGATAGCTGACTACTTACGAAATT
GTGACTTGTGAGATGCAGCTTTGGTTTCAGTATGAATTACGTATTAAATATTTTTCACACCACCCACTGATTTTGCTTCA
TTTAGCATGACCTTAGTATGGATAATGAGGTAACTTTTCAGTTGCTATTTTTACCCACGTTCAGTATTGCATAGCAGACA
GCAAAAATCCATCCGTTTACAGCAAAGTAGGATTTGACCCAGATTTCGCTTTGGTTCAGTATGAACTACGAAACAGTGAC
TGTTAAATATTCACACCAATCACTGATTTTTCTGAACTTGGAACGAACTTAGTACGGATAATGAGATTTTCTTTTTGGTT
GCTACCTTTTGAAGTTGGTATGGATACCATCCTTTTACAGTTTA---------TTATATGGTACATAAAGTGGTATTCTT
ACCCATTTTTTATGATGTGAGTGGTTAGTCTGCGTAAAAGTGGTGGATGCTATTTCAGCACCTTAGATATCAAGATAGTT
TACACCGGCAGTGTGCCAAGTTTCTCTCTTTTGCAACATTAGGATACCCAGTTCTCATCTCTATCTGATTCAA-CATGTT
TGCTGTCACGTTTATATTTACAGTGGAATACTCCGTAATATCATTTCTTAAACTTGTATGCAGTCAGTAAATTGGTTCTT
GTCATT-AACATTGTGAACATATCATCGTCAGTATCATATGAGA------------------------------------
--------------------------------------------------------------ACCTTCTTGTATTAACAT
TTTTGTATCTCATCATCA--TTTAGTTTGTTTACACGTCTTCTATGTGCG-------AAACATACAGTTCACCTAGGTTC
TTAACCTGTAACAGCGTCCTAACTGTTCAGACTGTTTGCTTTAACAAGCTATCTA-GTAAAAAGCTTGATAGTGATAG--
----GTATATTACCTTCTTTCTCATGT---------------------------TTCTATTATATTAGCGCACACTGATA
TTGTCTTGATGACAAAATATATATCAGAGACGATAATTCCTGATATCCGCTGCCTTCTGTGAATCGTTATG-TTTTTGTT
GCTGACTGAGGTTCTGTTCTGTTGTTCAGTTAATGATCCAATCCGAATTCCTGGACTGGTGGGTCTGTTTGTGGTCTTCT
TCGTCGATACAATCTCTGACGAGTCTTCGCAGATCGCCCTGGAAGTCATTATAACCAAGAAGAAGATGGCCATGCCAATA
TGATTCGTGACAATGACGAAAGGGGTCTCTAGTTGTAATA--ATATCAAGTTTGACAGGGTATTTTCTTGTTGCCAGGCT
TGTGAGATGCCAAAGTTTCTTATTGCTCTTGTACCCATAGTCGTCGTACCTTTGCACT----------------------
-------------GTTTAATACGAACGGCGCGCCCTTTCAAGTTTCTACTACTACATTTTGATGACGAATGGCTGTTGGA
ATGTGCAACTGCATGATGTGAAATTCATGATAACCGTGTTTGTTGCCGTGCTTGTGAATGAATTCAGCTGGGAACCTATT
TTGCTTTTGTGTTCTCAACAAAGCTGGGTTTCCTATTTTGCTTTTGC----------------------AC--------T
TGTTCACTTGTTGCTAATGCATTTCATACATTGCCAGTGTCTCG--TTTTTTCTGCACGGATAGTTATCACGCGTAAATC
TGGATACTTCACCAAAAATCCAAAGAAAATCAGTT-ATAAGCAAAATACATATTTGTTTGTCTTGTTTTGAGAAAAACTG
TTAGGCCAAATCTCTTTTTAGGTTCAAAAAAT-CAGATACTATGTAATAATAACAGAAATAATATGCATACTTCTGTGGT
GAATTTTCTGACAG--TATATAC-----------------------------GAGCTGACTGTCTTTATCATCGAAAATC
CATATACTTTCACTGAATGAACATTCAAACAATGCCAGTTAAGTAGGATGAGTGAACTAGGGTAGATCCAACAACATACA
AAGAAACATATATA----ACATAAACAATAAGTATAAATATAAATATACTTGAGACTATTCCAACAAACATCCTACAGAT
GGTGC-CCAACTGCAAAATTCACAACTTTATACAAAACCAAACACAAAAA-CCCTGTCAACAAAACATATGTGATGATGC
TCAGAGAGCCTGCACAAGCTA
>chr2D_1
CTTGTCGGTAAGGTAAGCCCTCGGTCGGGTCGGGTCGGGTCGATCCCCCTCTTCTCCTTCTCCTTCTCCTTGTCCTTCTC
CTCTGATGTGGTTAGG------TTGTGCGCCGCGGATGGATCTGATTCTTTTTTTTTTTTGAAAGATCCAGCAAAATGCT
GGCTTGATTCGATTTAGCAGGAAGGATGGATCTGATTCTGATCCAGCCAGCTCCAGGTCTCCTTCCTTCCTTCCTTCCTT
GTACTCCAGTATGTATGGTTTGGTGGATGGATGTGCTCTATGAGGTCCCGTCCGTCGCCTTGCTGCTGATTGAACCAACC
ATGCTATACTATGCTATCCTATCCTATCCTATCCTATCCATGGTTGATGCAATTACTATGTGCCATTCTTTCTTTCTTTC
TTTTCTCCTCCCTCCCTCCCTCCCTCCCTCCCTGTGTACCTATCTATCTACTC---------------TTTGGTTTGGTC
AGAGTCAGATATGGTTTGTTTGATGAGGGGAGGGGAGGGGATTCATACAAACTCTAGTCTTTTTGCTTCTTTCCCTGTTT
CTTGAGAGATCTCTC------------------------------------------TCTCTGTTTGCTTGATATAATAC
ATTATTATTACTCCCTACTTTCCCTTTTCTTTCATGCTTCTGCT----------------TCTGCTTCTGCTTGCCTGTC
TCTCATCTTTACTCACATGATCA----------------------------------------------TCTCCCTCCCC
ACCTCTGCTCTGCT-----ACCACCCATGAAATGAAATTGCTCTTCTCTGTAATGATATGATGATGATATTGCTCTTCCT
GTATTT----------------ATGTATGGTCACTCCTCTTCCTCATAGCCGTGTCA----TACCCTCTAATTAAATCAC
TTTAGTCGACGCAATAGTTATGCTTTCTTTCACTGCTTG--------TCACGGATGAGTGGGCAGGGCTTGATTCACTTC
ACCCTACTAGCTGCTGTGTGATGCAACTGACCGACTGTCT----------------------------------------
---------------------------------------------TATGTTCATGTGATGCTGTTGATTATCCACCATTC
TGTCTGTTATGCTGAAGCCGCTCTTCTGCAGATAACCAGGTTCTGTGGGCATGTCTGACAGCGAGAAAGAAGTGCCAGTG
GAGGTCG---AA---GGCGCGACCCGGGGGGCCGACTGGGAGGTGGTCACGCTCACAGCCTCCACCTACGCGGCTGCGCC
CAGCGGACCAGAAGGAGGAGCAGAGGGCAGGAGGCTCGGCGACGACAACGACGGCCGGGGCTCGTCCAGCACGCTGCTCA
TGTCGGACCACTTCGTGTTCCCCCCCAGCGAGCACGAGAACCTGCCCATAGAGACCGCCCTGCTCGA---GCCTCAGGAA
AGCACCAGCGTGGAAGATGCCGGCTTCAAGAATGTTGGTGGAGGCTACGATGATGGGTCCGAGACTGTCAAGTACTATGA
CGAGGGGAAGAGCCTGTCGGTACGTGATGCCGAGATGATGATGGGTGATGTGGCTGAGTTCCACGCAGAAGATGACGCAC
GCGGTTACGTTGTCCATGATGATGATGATGAT---TCCCAGGACAAGTCTGATGTGCCTCCTCAGGACAGCAGCAGCAGC
AGCAGCAAGGGCC---GCGGCTCTGGTGCCCCCTGCCAGTGCTGGTTGAAGAAGCACATGTCATGCCTGTATGACCAAGC
TAAGGACACTAATCATCTCTGGGGTGCGGTGGTCGTGGCTGCCCTGGTTGGCCTTGTCATCTTGTGGCGCAAAGACAAGT
TGCACATGAGCTGCCTTAAATGGCGCTCTCGCTCGGCAGTCAGGTATGCACTCATTAAGCTATCTGTTTCTTATCAACTC
TGATTTATGTTCCGTAGGGTTGAGTCAATAT-------CCTACTGCATTCTGTGGAAAAGAGGTGCAGCCTAGCTCTTTC
CATATATTTGGCAGTGTACAT-ACAGTTGTTGAATATTTATGGTCAGTAATGTGCGTGTTAGTTGCTTACTCTGTGCGCA
CCATCATCTTTACTCTCTCCTTAGCATGCGC-----------TCAGCTTAGTGTTTCTTTCAGCAGTACTGGAGAAATCC
ATTTTGTGCAGTAAGCTACTCTTTTCTGATTTTCCTTGCTCAGTTATGGGCCTGAAAAATCATTGAACTCCCTGTTACAC
CTC----------------------------TCCCCAGTGTTAGAACATCACGCGCACATGCTTCCTGAAATTAAGTATG
TGCGTTGATTTATTTTCTTTGTTAAGAAGTTAGTGGGGTGTAGTTTCTGTTGAAGGTTTTTTAGAGATAGTGTGGCATGG
TTAAAATTGAGCAGTAGAATAACTGTTTGAATAGTTCATTAGTTCTGAAATCGTGAGATATCATGTTGGTTTTGATATGG
ATTATGTATTAAATAGACACACCAGTCACTGATTTTGCTTCATTTGGCATGAGCTGTATGTACACTGCTAAATACTGATT
ATGTGTTAAATAGTACAGATGATGAGTTAATTTTTTGCTGCTATTTTTATTGATGTTCATTATTGCATAAAAAACAGCAA
ATTCGATTTGATTCAGATTTCACTTTGGCTTAGTATGAATTATGAAGTAGTG-----ACTATTAAATATTCCAACCTATC
ATTTTAAGTATTGTCACTGATGTGCATGTTAGTGTTGCTTCGAGCAGTGCTAGCAGTATGCCTGGTGTGTGCCATCAGTA
GACTCTCCTCAGCATGTGTTCAGATTGGCCTAGAATTTTCTTTGACGCTTAGCGTAATGTTCCTTCGAGCACTAGTAGCA
AAATTTATCTTGTGCAGTAAGGTACTGTTTCTGTTTTTTCTTGCCTAGTTATGGGCCTGAAGACTGATTGGACTCCCTGT
TACATCTCCTGGGCAGTTTATTCCTTTATCATGGCCCAGCATCTCCCCCTGTTAGCGGGGCGTAGTTTTTGTTTAAATTT
GATAGAGATGTTGTGTGGCAAGTAGCAAGTAGCAAGTAGTCAGCCAAATGATGTTGTGAT--------------------
-----TTGTGAGATACAGCTTTGGTTTCAGTACGAATTACGTATTAAGTA---TTCACATCAGCCACTGATTTTGCTTCA
TTTAGCATGACCTTAGTACGGATAATGAGGTAACTTTTC-GTTGCTATTTTTACCCACGTTCAATATTGCATAGCAGACA
GCAAAAATCCATCCATTTACAGCAAAGTAGGATTTGATCCAGATTTCACTTTGGTTGAGTATGAACTACAAAACAGT---
----------------CAATCACTGATTTTGCTGAACTTGGAATGAACTTAGTACAGATAATGAGATTTTCTTTTTGATT
GCTACCTTTTGAAGTTGGTATGGATACTGAAATGGT--------------------------ACATAAAGTGGGATTCTT
ACCCATTTTTTATGATGTGAGTGGTTAGTCTGCCTAAAAGTGGTGGATGCTATTTCAGCACCTTAGATATCAAGTTAGTT
TACACCGGCAGTGTGCCAAGTTTCTCTCTTTTGCAACATTAGGACACCCAGTTCTCATCTCTATCTGATTCAAACATGTT
TGCTGTTGCGTTTGTATTTACAGTGGAATACTCCGTATTATCATTTTCTGAACTTGTATGCAGTCAGTAAATTGGTTCTT
GTCATTTAACATTGTTAACATATCATCATTAGTATCATAATAGA------------------------------------
--------------------------------------------------------------ACCTTCTTGTATTAACAT
TTTTGTATCTCATCATTTAGTTTGTTTA---TACAAGTCTTCTATGTGGG-------AAGCATACAGTTCACCTAGGTCC
TTAACCTGTAACAGCGTCCTAACTGGTCAGACTGTTTGCTTTAACAAGCTATCTAAGTAAAAAACAATA---TGATATCA
TCTTGTACATTACCTTGGTTCTTGTGT---------------------------TTCTATTATATTAGCGCACACTGATA
TCGTCTTGATGACAAAATATATATTAGAGATGATAATTCCTGATGTCCGTTGCCTTCTGCGAATCGTTATGTTTTTTGTT
GCTGACTGATGCTCTGTTCTGTTGT-CAGTTGATGATCCAATCCAATCCCCTGGACTGGTGG------------TCTTCT
TCGTCGATACAATCTCTGATGAGTCTTCACAGATCGCCCTGGAAGTCATTATAACCAAGAAGAAGATGGCCATGCCAGTA
TGATTCGTGACAATGACGAAAGGGGTCTCTAGTTGTAATAATATATTAAGTTTGACAGGGTATTTGCTTGTTGCCAGGCT
TGTGAGATGCCAAAGTTTCTTCTTGCTCTTGTACCCATAGTCGTTGTACCTTTGCACT----------------------
-------------GTTTAATACGAACGGCGCGCCCTTTCAAGTTTCTACTACTACATTTTGATGACGAATGGCTGTTGGA
ATGCGCAACTGCGTGCGGTGAAATCCATGCTTGAGAATTGGTAC-----------------------CTGGGAATCTATT
TTGCTTTTGTGTCCCCTCCAAAGCTGTGTTTTTGGTCGTTTAGAATTTATCCATCAACATAAATCTTTTGTTAACCACTT
TGTTCACTTGTTGCTAATGCATTTCATACATAGCCAGCGTCTCA-TTTTTTTCTGCATGGATAGTTATCACGCGTAAATC
TGGATACTTGACCAAAAATCCTGAGAAAATCAGTT-ATAAACAAAATACGTATTTGTTTGTCTTGTTTCGGGAAAAACTG
TTAGACCAAATCTC-TTTTAGATTCAAAAAAT-CAGATACAATGGAATAATGACAGAAATAATATGCATACTTCTGTGGT
GAATTTTCTGACAG--TATATATATACTCTGCATCTACCAAATGACAGACTGGAGCTGACTGTCTTTATCGTCGAAAATC
CATATACTTTCACTGACCGAACATTCAAACAATGCCAGTTAAGTAGGATGAGTGC------------------ACATACA
AAGAAACATATATATGTAACATAAATAATAAATA-----ATAAATATACTTGAGACTATTCCAACAAACATACTACAAAA
TGGTGACCAACTGCAAAATTCACAACTTTATACAAAACCAAACACAAAA--CCCTGTCAACAAAACATGTATGATGATGC
TCAGAGAGCCTGCACAAGCTA
>chr2A_805
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--------------------------------------------------------------------------AATAGG
C------------------ATGCTTTCTTTCTTTCACTGCACGCCACTCACGGATGAGTAGGCAGGGCTTGA-----TTC
ACCCTACTTGCTGCTCTATCATGCAACTGACTGATTATCTTATACTTCCTCCGTAAACTAATATAAGAGTGTTTAGATTA
CTAAAATAGTGATCTAAACGCTCTTATATTAGTTTACAGAGGGAGTATGTTTGTGTGATGCCGTCGATTATCCACGGT--
--TCTGTTATGCTCAACCCGCTCTTCTGCAAATAACCAGGTTCTGTGGCCATGTCTGACAGCGAGAAAGAGGTGCCAGTG
CAAGTGGACCAA---GGCGCCACCCGGGGGGCCGACTGGGAGGTGGTCACGCTCACCGCGTCCACCTACGCGGCTGCGCC
CAGCGGGCCACAAGGAGCAGCAGAGGGCAAGAGGCTCGGCGACGGCAACGACGGCCGCGGCTCGTCCAGCACGCTGCTCA
TGTCGGACCACTTCGTGTTCCCCCCCAGCGAGCACGAGAACCTGCCCATAGAGACCGCCCTGCTCGA---GCCCCAGGAA
AGTACCAGCGTGGAAGATGCTGGCTTCAAGAACGTGGGAGGAGGCTATGATGATGGGTCCGAGACGGTCAAGTACTATGA
TGAGGGGAAGAGCCTGTCGGTACATGATGCCGAGATGATGATGGGTGATGCGGCTGAGTTCCACACCCAAGAT-------
--GGTTACGTTGTCCATGATGATGATGATGATGATTCCCAGGACAAAGTTGATGCGCCTCCTCTGGACAGCGGCAGCAGC
AGCAGCAAGGGGCGTGGCGGCTCTGGTGCCCCCTGCCAGTGCTGGTTGAAGAAGCACATGTCATGCCTGTATGACCAAGC
TAAGGAGACTAATCATCTCTGGGGTGCCGTGGTTGTGGCTGCCCTGGTTGGCCTTGTCATCTTGTGGCGCAAAGACAAGT
TGCACATGAGCTGCCTTAAATGGCGCTCTCGCTCAGCAGTCAGGTATGTACACATGGAGCTAT-TGTCTCTTTTCAACTA
TGATTCATGTTTCTTATGGTTGAGTCAATAT-------C-------ATATTTTGGAAATAATATGCAGTGTAGCTCTTTC
CG--TATTTAGCAGTGTACATTACAGTTGTTCAA----TATGGTCAGTAATGTGCATGTTAGTTGCTTGCTCTGTTG---
-------CTTTATTCTCTC-----------C-----------TCAGCTTAGTGTTTCTTTCAGCAGTACTAGAGAAATCC
ATTTTGTGCAGTAAGCTACTCTTTTCTGATTTTCCTCACTCAATTATGTGCCTGAAAACTCATTGAACTCCCTGTTACAC
CTCCTGATCTTTTATCATGGCCCTGCACCTCTCCCCACTGTTAGAACATCACGTGCACATGCTTCCTGAAATTACGTATG
TGCATTGATATCTTTTCTTTGTTACTAAGTTAGTGGGGTGTAACTATTGATGGTA-TTTTAGAGATATAATGGGGCATGA
TTAAAATTGAGCAGTAGAAGAACTGTTTGAATAGTTCATTGGTTATGAAATCGTGAGATGT-------------------
ATTATGTATTAAATATCCACACCAGTCACTGATTTTGCTTCATTTGGCAAGAACTGTATGTACACTGCTAAATATTGATT
ATGTATTAAATGTTACAGATAATGAGTTAATTTTTTGCTGCCATTTTCATTGATGTTCATTATTGCATAAAAAACAGCAA
ATTGGATTTGATTCAGATTTCACACTGGCTTAGTATGAATTATGAAATATTGGCTTCACTATTAAATATTCTAACCAGTC
ATTTTAAGTATTGTCACTAATGTGCATGTTACTGTTGCT-----------------------------------------
---------------------------------------------------------------TTCGAGCAGTACTAGCA
AAATTTATTTTGTGCAGTAGGGTACTCTTTCTGTTTTTCCTTGCTCAGTAATGGACCTGAAGGTTGATTGGACTCCCTGT
TACATCTCCTGGGCAGTTTATTCCTTCTTCATGGCCCAGCATCTCCCCCTGTTAGCAGGGCGCAGTTTTTGTTTAAAGTT
TATAGAGATGTTGTGTGGCATGTTTAAAATGAGCAGTAGAAGAAC------TGTTGTGAT--------------------
-----TTGTGAGATACAGCTTTGGTTTCAGTATGAATTACGTATTAAGTA---TTCACACCACCCACTGATTTTGCTTCA
TTTAGCATGACCTTAGTACGGATAATGAGGTAACTTTTC-GTTGCTATTTTTACCCATGTTCAATATTGCATACCAGACA
GCAAATATACATCCGTTTACAGCAAAGTAGGATTTGATCCTGATTTCACTTTGGTTCAGTACGAACTACGAAACAGTGAC
TGTTAAATATTCACAGCAATCACTGATTTTGCTGAACTTGGAATGAACTTAGTACGGATAATGAGATTTTCTTTTTGGTT
GCTACCTTTTGAAGTAAGTATGGATACTGAAATGGTTACTATCAGTTTACAGTTTATATGGTACATAAAGTGGGATTCTT
ACCCATTTTTTATGATGTGAGTGGTTAGTCTGCCTAAAAGTGGTGGATGCTATTTCAGCACCTTAGATATCAAGTTAGTT
TACACCGGCAGTGTGCCAAGTTTCTCTTTTTTGCAACATTAGGACACCCAGTTCTCATCTCTATCTGATTCAA-CATGTT
TGCTGCCACGTTTATATTTACAGTGGAATACTCCGTAGTATCATTTACTTAACTTGTATGCTGTCAGTAAATTGGTTCTT
GTCATT-AACACTGTTCTCATATGGTACCAATGTTAATGAGAAGAACCAATTTACTGACCGCATACAAGTTAAGAAAATG
ATACTACGAAGTATTCCACTGTAAATATAAACGTGGCAGCAAACATGTTGAGTCAGTAATATACCTTCTTGCATTAACA-
TTTTGTTTCTCATCATTTAGTTTGTTTTGTTTTCAAGTCTTCCTAGTAGTACGTGTTAAACATACAGTTCACCCAGGTCC
TTAACCTTTAACAGTGTCCTAACTGGTCAGACTATTTTCTTTAATGAGTTATCTA-GTAAGAAGCAATA---TGATAG--
----GTATATTACCTTCTTTCTTATTGTTACATTATATTTTTTTGACCATATAATTCTATTATATTAGCTCACACTGATA
TCGTCTTGATGACAAAATTTAGATTAGAGATGATAATTCCTGATGTCCGTTGCCATCTGTGAATTGTTATG-TTTTTGTT
GCTGACTGAGGCTCTGTTCTGTTGT-CAGTTGATGATCTG-----ATCCCCTGGACTGGTGGGTCTGTTTGTGGTCTTCT
TCCTCGATACAATCTCTGATGAGTCTTCACAGATCGCCCTGGAAGTCATTATAACCAAGAA---GATGGCCATGCCAATA
TGATTCGTGACAATGACGAAAGGGATCTCTAGTTGTAATAATATATTAAGTTTGACAGGGTATTTGCTTGTTGCCAGGCT
TCTGAGATGCCAAAGTTTCTTCTTGCTCTTGTACCCATAGTCGTCGTACCTTTGCACTGTTTTTTTTTTTTTTTTGCATC
GGACCTTTGCACTGTTTAATACGAACGGCGCGCCCTTTCAAGTTTCTACTACTCATTTT---TGACGAATGGTTGTTGGA
ATGTGCAACTGCATGCTGTGAAATCCATGACAACAGCGTTTGTTGTCGTGCTTGAGAATGAATT---CTGGGAACCTATT
TTGCTTTTGTGTTCCCTCCAAAGCTCTGTTTTTGGTCGTTCAGAATTTATCCATTAAACGTTGTTAAGTAC--------T
TGTTCACTTGTTGCTAATTCATTTCATACATTGCACGCATCTCATTTTTTTTCTGCACGGATAGTTATCACGCGTAAATC
TGGATACCTCACCAAAAATCCAAAGAAAATCAGTTTATAAACAAAATACAATTTTGTTTGTCTTGTTTTGAGAAAAGCTG
TTGGACCAAAACTC-TGAGGAAATCAAAAAATCCAGATACAATGG---AATAACAGAAATAATATGCATACTTATGTGGT
GAATTTTCTGACAGTATATATATATACTCTGCACCTACCAAATGACAGACTGAAGCTGG---------------------
CATATACTTTCACTGAGTGAACATTCAAACAATGCCAGTTAAGTAGGATGAGTGAACTAGGGTAGATCCAACAGCATACA
AAGAAACATATATA----ACATAAACAATGT------ATATGAATATACTTGAGACCATTCCAACAAACATACTACAAAA
TGGTGACCGACTGCAAAATTCACAACTTTATACAAAACCAAACACAAAAACCCCTGTCAACAAAACATATATGATGATGC
TCAGAGAGCCTGCACAAGCTA
>SNPs
----------------------------S---------S----S--------------------S--S--SS---S----
-----S------SS--SSSSSS------------------------S-SSSSSSSSSSSSSSSSSSSS-SS-SSSSS-SS
SSSSSS-SSSSSSSSS----------------------------------------------------------------
SSSSS------------SS-SSS--SS--SS--SSSSSS---S-S-SSS--------SSSSS------------------
-----------------------------------------------------S--------------------------
---SS-SSSS-----------SSS------SS-S----S-----------SSSSSSSSSSSSSSSSSS---------S-S
-------S-S---S-------------------------------------S---SSSSS----SSSSS-S--SS-S-S-
S-SS-SSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------S----S
----------S-----S------S--------SS---S-SSS-SSSSSSSSSSSSSSSSS-----S--------------
------S------S-------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------
--------------SSSSS---------S----SS--------------S---S--------------------------
SS----SSSSSSSSSSSSSSSS-------S---------------------S----SSSSS-------------------
------------------------------S-----SS-------------S------S---------------------
----------------------------------------SSSSS-SSS--S---SSSS---------------------
-----------------------------------------------------S--------------------S-----
----S-------------S----S--------------------------------------------------------
------------SSS-----------S-----------------S--------------------------S--S-----
-----------------------------------------------------------S--------S-----------
----------------------S--------------------------------------------SSS---------S
--------------S--S-----------------S-----S--------------------------------------
---------------------S--------------------------S----------------------------S--
-------------------------------S----------------------------SSS-----------------
-----------------S-----------------------------------------------------------S--
S--------S--------------------S-------------------------------------------------
--------------------------------------------------------------------------------
--------S-----------S--S-------SSSSSSS----------S---------------S-------S-------
------S------------------------------------------S------------------------------
----------------S--------------SSSSSSSSSSS--------S----------S-----------S------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------S-----------------------------------------
----------------S-----S---------------------------------------------------------
-------------------------S------------------------------------------------------
---------------S------S-----S------------------------------------------S--------
-----------S--------------------------------------------------------------------
---------------------------S------------S-------S-------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------S------
-------------------S-----------------------------S----------------------------S-
-------S----------------------------S-------------------S---SSSSSSSSSSSSSSSSSSSS
SSSSS---------S--------------------------------S--SSS---------------------------
------------------S--------------------S-----------------------S----------------
-------------------------------------S---------S--------------------------------
---------------S--------------S------------S------------------------------------
---------------------------SSSSS-SS-SSSSS-S------------------------------S------
---------------------------------S----------------------------------------S-----
--------------------------------------------S-----------------------------------
-------------------------------------S--------SS-S------------------------------
---------------S-----------S-S---------S----------------------------------------
--------------------------------------------------------------------------------
----------------SS-----SS----------S------------S-----------------------------S-
-------------------------S---------------------------------------SSS-SSS--------
----------------------S---------------------------------------------------------
-S----------------------S-----S-------------S----S------------------------------
-----------S-------------S-----S------------S-SSS-------------------------------
-------------------S--------S---------------------------------------------------
----------------------------------------------S------------------S--------------
---------------------S----------------------------------------------------------
--------------------------------------------------------------------------------
---------------S--------S---------S-S--------S--------S---------SSS-------------
--------------S-SS--------S----SSSS-SS-S-SSSSSS---------------------------------
-------------------------------------S-----S------------------------------------
----------------------------------------S---------------------------------------
----S---------S------S------------------S---S-----------------------------------
----------------------S-----------------------------------------------S---------
----------------S---------------------------------------------------------------
-------------------------------S--SSS----------------------------------S-----S-S
S-SSS-----------------------------------------------------------------S---------
---------------------
>forward_478
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------CGCTCTCTGGTTTGGTTTGC--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>reverse_1850
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------CAATCATCTCTGGGGTGCGG---------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>forward_1741
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------GACAAGTCTGATGCGCCTCT-------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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---------------------
>reverse_3034
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------------------------CCCCTGT
TACATCTCCTGGG-------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>forward_1742
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------ACAAGTCTGATGCGCCTCTG------------------
--------------------------------------------------------------------------------
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---------------------
>reverse_3200
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------T
GTGACTTGTGAGATGCAGCT------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>forward_2201
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------TACTCTGTCCTCAGCACGTG---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------------
>reverse_4367
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------ATTCCTGGACTGGTGGGTCT--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------
