>input_sequence_28812
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------------------------------------------------------------ATTCGCGACGAGAGAAGCA-
GAAAAAAAACAATCCCCAATCCCTCCGCCCGCC----CGCCCACCCACCACTGCTCCCCCACCTCGTTCTCCCCTCCCAG
ATCTGCCGGGCACGGCCCTCGCCGGCGGCGTTGGGTCCGCGATGCCTCGGACGGCGCGGGGGGCCTCGCCCCTGCTCCGC
GACCACGCCGACGCCCTCAACGTCCCCTCCGCCCGCTGCTGCTCCCACCGCCTCAAGCCCTGGTCTTGGCACCCCAATAT
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------CCATTCTTCC
TAGCGCGCCGTCCCCTTCCTCCCCTCTCTTCCCTTCCCCTTCCTCT-------TTACTCTCGTAGCTGGACTTTTCTGGT
TCTCGTCAGTCTTCACTGCCG-------TGCCTCTGGTTGTGGGATTGGATCGCCGGCGCTGGGACCGGGGTATGCCGCT
GACCGACCGATCCCCTCTCTTTCAATCTCGCCAAATCTGGCGCAAACCCGCATCCATTAGTTGTACTATCAATCTTGTTA
ATTACTAAGTATACTGCTGTTTAACGTTCACTTGGGATCTAGGACCTTTAATCT--------------------------
-------GAGTAGATGCTAGTTTAATGTAATCTTAATAAGTCAGCTCATGATGGCCTTGTGGTT---TGATGGATGCAGG
TCTGTAGCTTGTGCTTGCTGTTCTAGGAAGCTGGTTTCTTGATGGATGGTCAATCCTGTGATCTTGGGAGTGTGCCAGCA
GTGGCATCTCATGGTACGGGTACCTCTTCCGTTGTCGCCGGAGGCGCCGACATTTCTCCAGGGAAACAGTCTGCCCTGGA
TGGAGCTTCGCGGCAGGGGGAGGATGCCGATTGTTCATCGGAGGCTGGAATGTGTGCGGGTTTCTCCAAGTCGGCCAGCT
CAGGGATGAAGAAAGATCTCCAGAAGTGCGCAACGTTTCCGTCATC------TGCCGTCGAGGCAGAACAGGACGACTCA
TGTTGTGCCGCCGATGACGATGCGCTGCCGAAGGATGCGCACACTTACCAGCGCTCTGTTTCCTTGCCTGTGAGTAACTC
ATGTTAAAATGTGTTATTGTTTATCAGGAAATTGGCAAGTATTATTGTGCTTTGGATCCATTTCTTACTATGTATTACTA
GGAATCTGTTGCGTT---------------GTCGTTAGGACCATGATGTTTAAATCTAACAGCAAAC-------------
--------------TACTCCCTCTGTTCCTAAATATTTGTCTTTTAGAGATTTCAAATGGACTACCACATACGAATGTAT
ATAGACATATTTTAGAGTGTAGATTCACTCATTTTGATCCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAATAT
TTAGGAACGGAGGGAGTAGTTCTCAACCAGCTGTCAGTACATAGTGGTTTCAACTTTCAAGCTAGTGTAGTTATATGCTG
AACTACTGACACAACTAGCAGTATCCAGTTTTCAGACCTGTCATCACATTCTTTGGAGGCTCATACTTGCAAGTGGGCCA
ATGAGGTTCATAAGAATGTTGATCAATTCATTGCTATTTTGGTGTGACTGTTTGAGCATTATAAACCATGTGTTGATATT
TAGTGTGGAAAACTGGAAATGTATATATAGCATGTTTCTTACTATGTACAATTTCATAAACTGCATGTGATGCAATAGGT
TGGTCTGTTCTTTCCGTTACAA---------AGCAAGTATGACACCGCAAGACACCATTACAGTGTTGACCTGCATAAGT
CGCTGTGTCCGTTTCTGCAGTTGTAGTATTGCTAAGCAACTGGGGTATGCTTTACAGTTGTTGGTTATAGTCATTGATTT
GGAAGTGTAT--ACAACCAGAATTGCTTGTCGTTCATGTGAACCAACTCACTAATTATCAACCCCATGTTGACAAATTAC
ATGTGCTCCATGGAACATTATTTTGTCGGCAAGTCAGCAATAGTCAGCAATAATTTTGTGGCTATTAATATTGTGTAATA
AGGAAACTAACGAATATCTTCCTTCTCTTCTCTCCTCAGTCAACTGTGAAGCTCATCCCTGCTATCAAAGGAAGCCGCCA
AAAGAATGGGATTCCTTTACCAGCAGAGGATCGCCACATCAAATGGGCGGCCGACGTGTATGACCCCCCTGTTTCATCCG
TTTCTCATTCTGTGAACAACGGTTACCAGCGGCGGCCCAAGCCCCGTAAGAAGGACAAGAGCAAACAGAAAGAGAAGCGG
AAGGCCAGGAACAAGAAAAAAACCAATAATGCTGCCCAGAATCCGGCTGTGCTCCAGACTCCCGGGTAAGATTGCTAGAA
CTTTTCCTGCTGTTAACTTCCCGCGCC-ACCTGTAGATGAAGTTTGTTGATCTGTGCACCTTGTGCTTGCCAGACTGGAA
GACCTTGGCACCTCCATTGGTAGTGAGGCCCCAGCTGATCCTGGCAAGCTTGAGACCGAGATGTTGGACTATGGCATCAG
CAGCCAAGAGGCCAAATGCGGAAGCAGCTTCCTGCTCGAGACGGCTGCTAAGATGCATTTCTCCACCGCTGAGGCCTCCT
GAAACGCCCGCGGGAGACTCCAGACTCTGCAGTAGCATCTCTGTTATGTAAATAGGATGGCTGTACATAAATAAATCTTG
TGTGTTGTTATCACCATGTATCTCCCGTTGCACATCAGCACGTGATGTGCTAGAGAACTTCTGCCCTAGCGTTATTTTGT
AGCAATCGCCATGAATTTTGGACTGGTTTTTGTATGTAACTATGTATGTTCTGCTGGACAAAACTATCATCAATCTTTTA
CTAC----------------------------------------------------------------------------
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------------------------------------------------------------------------
>chr1B_1_TraesCS1B01G048800
ACTTGTTCAACATTTTCAAATACTTATTCAATATTTTCCAAATACTCATTCAACATTTTCAAATACTTGTTCGACATTTG
TCTACTTTTCTAACATTTTTCGAATATTTTTATAGAGTGTATTTTGAAAAATGTTTCTTCAAATACCTGTTCAACATTTT
CAAATACTTACTCAATATTTTTCAAATACTCATTCAACATTTTCAAATATTTATCCAACATTTATCTACTTTAAAGTATA
AACAAAAAACAAAAACAGAAAATATAGAAGAACAAAAAACAGGCTATGACTTTCCGGGCGCGTGGGCCGGCCCACCTTGC
TCGCCCCCTTCAGCGAGTCTGGAAGTTAGACTCGCTGAAGGCGAGGAATAGGGGCGCCCGGATCGAATCCCCCCGCCAAG
GCCCCCGGGGTCGGTCAACCGGTCCTGGCGGGCTGCGGTCTCTTGGAGGGCTATAAATGGAGCCCAACCGCCTCCAT-AA
CAGGGCCGAATCCGATGCAAACAAGGAGGCCCGATCCCTCGGAG----ATTCCCCGGGGCGCACGCAACCGACAAGCAAC
AGAGACAAGACCCCGAAGTTGCTGTGCTACACCAACACCAAAACACGGATGTCGAGTAGGTACAGTTTCAGCACAGCAAA
GACATGAAAAGATCATCCACGTTCATGCGCTTAGCCAGGAGCACCAGGTTAGAAACCGTGAGTAGTAACACTCTTGACGC
TCTCCACCAAATGAAACCACCTAGTCATCTACCCATGATGGGGCACCCCAAATGCGTGACGCTAGTTTGGTTCCCTTCTT
TCACTATGACGCACAAACTAGCTCTT------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------GGAGGCCCAACCGCTTCCACGACAGGGCCGAATCCGATACAAA---
---------------AGCAGATTC--------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------ATTCCCCGGCGCGCACGCAGAAGCCGACAAGGCAGCCACCACACGTGTCCCCCCCTTATCCACACCGCACTC
ACT-----CCCCTCCCCCGCTATTTATGAGCTCCCTGGAGAAGACTTGACTTCCACTCGCATTCGCGACGAGAGAAGCA-
GAAAAAAAACAATCCCCAATCCCTCCGCCCGCC----CGCCCACCCACCACTGCTCCCCCACCTCGTTCTCCCCTCCCAG
ATCTGCCGGGCACGGCCCTCGCCGGCGGCGTTGGGTCCGCGATGCCTCGGACGGCGCGGGGGGCCTCGCCCCTGCTCCGC
GACCACGCCGACGCCCTCAACGTCCCCTCCGCCCGCTGCTGCTCCCACCGCCTCAAGCCCTGGTCTTGGCACCCCAATAT
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------------------------------------CCATTCTTCC
TAGCGCGCCGTCCCCTTCCTCCCCTCTCTTCCCTTCCCCTTCCTCT-------TTACTCTCGTAGCTGGACTTTTCTGGT
TCTCGTCAGTCTTCACTGCCG-------TGCCTCTGGTTGTGGGATTGGATCGCCGGCGCTGGGACCGGGGTATGCCGCT
GACCGACCGATCCCCTCTCTTTCAATCTCGCCAAATCTGGCGCAAACCCGCATCCATTAGTTGTACTATCAATCTTGTTA
ATTACTAAGTATACTGCTGTTTAACGTTCACTTGGGATCTAGGACCTTTAATCT--------------------------
-------GAGTAGATGCTAGTTTAATGTAATCTTAATAAGTCAGCTCATGATGGCCTTGTGGTT---TGATGGATGCAGG
TCTGTAGCTTGTGCTTGCTGTTCTAGGAAGCTGGTTTCTTGATGGATGGTCAATCCTGTGATCTTGGGAGTGTGCCAGCA
GTGGCATCTCATGGTACGGGTACCTCTTCCGTTGTCGCCGGAGGCGCCGACATTTCTCCAGGGAAACAGTCTGCCCTGGA
TGGAGCTTCGCGGCAGGGGGAGGATGCCGATTGTTCATCGGAGGCTGGAATGTGTGCGGGTTTCTCCAAGTCGGCCAGCT
CAGGGATGAAGAAAGATCTCCAGAAGTGCGCAACGTTTCCGTCATC------TGCCGTCGAGGCAGAACAGGACGACTCA
TGTTGTGCCGCCGATGACGATGCGCTGCCGAAGGATGCGCACACTTACCAGCGCTCTGTTTCCTTGCCTGTGAGTAACTC
ATGTTAAAATGTGTTATTGTTTATCAGGAAATTGGCAAGTATTATTGTGCTTTGGATCCATTTCTTACTATGTATTACTA
GGAATCTGTTGCGTT---------------GTCGTTAGGACCATGATGTTTAAATCTAACAGCAAAC-------------
--------------TACTCCCTCTGTTCCTAAATATTTGTCTTTTAGAGATTTCAAATGGACTACCACATACGAATGTAT
ATAGACATATTTTAGAGTGTAGATTCACTCATTTTGATCCGTATGTAGTCACTTGTTGAAATCTCTAGAAAGACAAATAT
TTAGGAACGGAGGGAGTAGTTCTCAACCAGCTGTCAGTACATAGTGGTTTCAACTTTCAAGCTAGTGTAGTTATATGCTG
AACTACTGACACAACTAGCAGTATCCAGTTTTCAGACCTGTCATCACATTCTTTGGAGGCTCATACTTGCAAGTGGGCCA
ATGAGGTTCATAAGAATGTTGATCAATTCATTGCTATTTTGGTGTGACTGTTTGAGCATTATAAACCATGTGTTGATATT
TAGTGTGGAAAACTGGAAATGTATATATAGCATGTTTCTTACTATGTACAATTTCATAAACTGCATGTGATGCAATAGGT
TGGTCTGTTCTTTCCGTTACAA---------AGCAAGTATGACACCGCAAGACACCATTACAGTGTTGACCTGCATAAGT
CGCTGTGTCCGTTTCTGCAGTTGTAGTATTGCTAAGCAACTGGGGTATGCTTTACAGTTGTTGGTTATAGTCATTGATTT
GGAAGTGTAT--ACAACCAGAATTGCTTGTCGTTCATGTGAACCAACTCACTAATTATCAACCCCATGTTGACAAATTAC
ATGTGCTCCATGGAACATTATTTTGTCGGCAAGTCAGCAATAGTCAGCAATAATTTTGTGGCTATTAATATTGTGTAATA
AGGAAACTAACGAATATCTTCCTTCTCTTCTCTCCTCAGTCAACTGTGAAGCTCATCCCTGCTATCAAAGGAAGCCGCCA
AAAGAATGGGATTCCTTTACCAGCAGAGGATCGCCACATCAAATGGGCGGCCGACGTGTATGACCCCCCTGTTTCATCCG
TTTCTCATTCTGTGAACAACGGTTACCAGCGGCGGCCCAAGCCCCGTAAGAAGGACAAGAGCAAACAGAAAGAGAAGCGG
AAGGCCAGGAACAAGAAAAAAACCAATAATGCTGCCCAGAATCCGGCTGTGCTCCAGACTCCCGGGTAAGATTGCTAGAA
CTTTTCCTGCTGTTAACTTCCCGCGCC-ACCTGTAGATGAAGTTTGTTGATCTGTGCACCTTGTGCTTGCCAGACTGGAA
GACCTTGGCACCTCCATTGGTAGTGAGGCCCCAGCTGATCCTGGCAAGCTTGAGACCGAGATGTTGGACTATGGCATCAG
CAGCCAAGAGGCCAAATGCGGAAGCAGCTTCCTGCTCGAGACGGCTGCTAAGATGCATTTCTCCACCGCTGAGGCCTCCT
GAAACGCCCGCGGGAGACTCCAGACTCTGCAGTAGCATCTCTGTTATGTAAATAGGATGGCTGTACATAAATAAATCTTG
TGTGTTGTTATCACCATGTATCTCCCGTTGCACATCAGCACGTGATGTGCTAGAGAACTTCTGCCCTAGCGTTATTTTGT
AGCAATCGCCATGAATTTTGGACTGGTTTTTGTATGTAACTATGTATGTTCTGCTGGACAAAACTATCATCAATCTTTTA
CTACACCACAGGTGCTGCATTGTCTAA-GATTCGCTGGTCGTGGCCAGTCCTCCATAGTAGTTTTGTTTAA-ACTGATCT
ACTGGAGGCAGTGTTCAAAATCAGTATTTATCAGAACTCCATTACCCCCCCTGCCCAATCCATCTTCAGATGGATGTCCA
AGTAAAAACATTCGAAATCATTGCATCCTGATGCATATCCACATACAAATGTTGCAAATCATCCCCATGAAACTTAGCAT
CTGATGTTTAACCTAGGTTACTGTCATTTACCAGTTTGAAATTCACCCCTGTCAGTGAGATAC-------TTCTTTTACA
AAA----------------AGCAGAGGATGAGGCATGCTAATACAAATTTCTGAATTGGTTTTATCATCAAAATGTGTTG
CATAATAAGCCTCAGTGGACATCATGGCATCATTTGTTTCAAGAACCAGTGATCCTAGTATGAAAGCTCACAAGATAGAA
TCTACCAAAATTGTTACCATCAAGATGCAACTGATCTTTAGCAGGCAAGAA-GGGGATATCAGGATCCACGAATCAACAA
CCAGAAAGGATACATTTGTCGTCGCGCCAGTCATAGCTTACATCTTCCTTAGGTGGTACATACTGGCAACTCAAATCACA
ATTGCCTCATGGTAAACAGCTCATGACCAGCCTCGGCGAGCACGCTAAATCCTCATCAGAGGCTCATACTTAAGGTAAGC
AGCAGCACAGCCATGGTGCTCAGTTGGCACGGCCTTGGATGACATCGAAGCCGACCTCGGTCGGGTCTGTCGCCTGCAGC
TCCACCTGGATGCCGTCGAGCTCCCTCTTGAACCTCTCCTTGGAGCTTGCGTAGATCATCTTGCTCCTCACGCGTGCGGT
GTCAGGAGACCTGCATAGACATTCAGAGCGAACCGGTTGTTATTACACAGTTGCGT-GTTGTGAAGAGCGAGCGGTGAAT
CGAAGAACAGATGG-AGGCATCGCTAACCATGCGACGAAGAATATCTTGCTCTTTTGGCAGTTCTCCTCGGT
>chr1A_444
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------TGGCGGGCTGTAAGCAGAGCCCAACTCGCTTCCAAAA
CAGGGCCGAATCCGATGCAAACAAGGAGGCCCGATCCCCCGCAGATCCATTCCCCGGGGTATAGCTGGCCAA--------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------ACGG
GCCGGCCCGGCCCGGCACGGCACAGCCCATCCTAATCGTGCCTGGCACGGCCCGGCCCGCCTAGGCACGATTATTATACG
GGCCGTGCCGTGCCAGCCCGCGTGCTGCAGCCTGCAGCCCAGGTACGGCCCGTATGCTAATCGGGCCGGCCCAGCCCACT
AATCTACCTCCTATTTTGCGCATTGAGCGTTTTTTAGCCTATTTTTACCTGTTGGCCCATATTAGAATACATAAAAAAAA
TATAAAAAAGTTAATCGGGCCGTGCCATGCCGGCCCGCGTGCTCGCCCTTCAGGCCCAGGCACGGCCCATGGCGTGCCGC
GTGCCGGGCCTGGCCCGTTTAGCACGTGCCGTGCCATGCCGGCCGGCCCACCGGGCCGGCCCAACTATCCCGGCCCGTTT
GGCCAGCTATACCCCGGGGCGCACGCGGAAGCCGACAAGCCGGCCACCACACGTGTCCCCCCCTTATCCACACCGCTCTC
CCTCACTCCCCCTCCGCCACTATTTATAAGCTCCCCCGAGAAGACTTGACTTCCATTCGCGACGGCACAAGCAAGAAGAG
AGGAAAAAAAAATCCCCAATCCCTCCGCCCACCCACTCACCACTGCT--------------CCTCGCCCTCCCCTCCCCT
CCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCACTCCTCC
TAGCGCGCCGTCCCCTCCC---CTTC----CCCCTCCCCTTCCTTG-------CTCCTCTCATCGCTGGACTTCTCTCCT
TCTCGTCA-------CTGTCGACTGCCCTGCCTTTGCTCGTGGGATTGGATCGCCGGCGCCGGGACCGGGGTACGCCGCC
GACCGACCGACCCCCTCTCTTTTAACCTCGCCGAATCTGGCGCAGACCTGCATCCAGTGATAGCACTGTCGATCTTTTTA
ATTAGC------ACTGCTGTTTAACGTTCGTTTAGGATCTACGAAAAACGGAGC--------------------------
----------TAGCCGCTAGTTTAGTGGATCCTTAATCAGTCAGCTCACGATGCCCTTGTGGTTGTTTGATGGACGCAGG
TGTGTGGTTTGTGGTTGCTGTTCTAGGACGCCGGTTTCTTGATGGATGGCCATTCCTGTGATCTTGGGAGCGTGCCGGCA
GTGGCATCTGATGGTGCGGGTGCCTCTTCTGCTGTCGCCGGCGGCACGGACATTTCTCCAGGGAAGCAGTCTGCCCTGGA
TAGAGCTTCGGGACAGGGGGAGAATGCAGATTGTTCAGTGGAGGCTGGAATGTGTGCAGGTTTCTCCAAGCCGGTTGGCT
TGGGGTTGAAGAAGGACCTCCAGAAGTGCGCAACGTTTCCGTCATCGTCATCTGCCGCTGAGGCCGAACCGGAGGACTCA
TGCTGTGATGCCGATGATGACGC---GCCGAAGGACGCGCACACTTACCAGCGCTCTGTGTCCTTGCCTGTGAGTAACTT
GTGCTGTGTGTTATCATTTGCCAAAAGATCCA---CAAGTAATATCATGCTTTCGATCCATTTCCTACTATACTACTAGT
AGACATGAACATCTAGTCTGTGTTGTGTCAGTCATTGTGATCATGATTTTAAAATCTAGCAGCTATC-------------
--------------CAGGTTTTAAGCTAG---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTAATGATATGCTG
AACTACTGAAACAACTA------TCCAGGTTTCTGACCTGTCATCACATTCTTTGGAGGCTCAAGGCTTAATGCTTAGGG
A-----TTTATAAGAGTGTTGATTAATTTATGGCTTCTTTGTTGTATTTGTTTGAGCATTATAAACCATGTGTTGATATT
TTAGTG-------TGGAAAGGTATAGATAGCATGTTGCTTACTGTGTATAATTTCACAAACTGCATGTAATGCAATAGGT
CGGTCTGTTCTTTCCGTTACAAGGAAGTAACAGCAGGTATGACACCGCAAGACAATAATACAATGTTGACCTGCATAAAT
CGTTGTGTTTGTTTCTGCAGTTGTGGTATTGCTAAACAACTGGGGTATGCTTTACAATTGTCGGTTATAGTCATTGATTT
GGAAGTGTATATACAACCAGAATCGCTTTTCGTTCACGTGAACCAACTCACTAATTATCAACCCCATGTTGATAAGTTAC
ATGTGCTCCATGGAACGTCATTT-GTCGGCAAGCCAGAAATAG----------TTTTGTTGCTATTAATATTGCGTAATG
AGGAAACTAACCAACCTCTTCCTTTTCTTGTCTCCGCAGCCAACTGTGAAGCTCATCCCTGCTATCAAAGGAAGCCGCCA
AAAGAATGGGATTCCTTTACCAGCAGAGGATCGCCACATCAAATGGGCGGCCGACGTGTATGACCCCCCTGTTTCATCCG
TTTCTCATTCTGTGAACAACAGTTACCAGCGGCGGCCAAAGCCTCGTAAGAAGGACAAGACCAAACAGAAAGAGAAGCGG
AAGGCCAGGAACAAGAAAAAAACCAACAACGCTGCCCAGAATCCAGCTGTGCTCCAGACTCCTGGGTAAGATCGCTAGAA
CTTCTCCTGCTGTTAACTTCCCACACCAACCTGTAGACGAAGTTTGTTGATCTGTGGACCTTGTGTTTTCCAGACTGGAA
GACCTTGGCACCTCCATTGGTAGCGAGGCCCAAGCCGATCCTGGCAAAGTTGAGACCGAGATGTTGGACTATGGCATCAG
CAGCCAAGAGGTGAAATGCGGAACCAGCTTCCTGCTCGAGTCGGCTGCTAAAATGCATTTCTCCACCGCCGAGGCCTCCT
GAAACGCCCGCGGG----------------------ATCTCTGTTATGTAAATAGGATGGCTGTACATAAATAAATCATG
TGTGTTGTTATCACCATGTACCTCCCATTGC--------ACGTGATGTGCTAGAGAACTTCTGCCCTAGCGTTATTTCGT
AGCAATCGCT-TGAATTTTGGACTAGTTTGTGTATGTAACTATGTATGTTCTGCTGGACAAAACTACCATCAATCTATTA
CTACACAACAGTTGCTGGCTTATCTAAAGAATCGCTGGTCGTGGCCAGTTCTCCATAGTAGTTATGTTTAAAACTGATCT
GCTGGAGGCAGTGTTCAAAATCAGTATTTATCAGAACACCATTATCCCCCCTGCCCAATCCATCTTTAGATGAATGTTCA
AGTAAAAACATTTGAAATCATTGCATCCTGATGCATGTCTACATACAAATGTTGCAAATCATCCCCATGAAACTTAGCAT
TTGATGTTTAACCTAGGTTACTGTCATTTGCCAGTTTGAAATTCACTCCTGTCAGTGAGATGC-------TTCTTTTGCA
AAATCAGTTAGATACTTGAAGCAGAGGATGAGGCATGCTAATAGGAACTTCTGAATTGGATTTATCATCAAAATGTGTTG
CATAATAAGCCTCAGTGGGCATCAT--------TAGTTTCAAGAACCAGTGATCCTAGTATGAAAGCTCACAACA-AGAA
TCTACCAAAATT-TTACCATGAAGATGCAACTGATCTTAGCAGGTAAGAAGGGGGGATATCAGGACCCACGAATCAACAA
CCAGAAAGGATACATTTGTCGTCGCACCAGTCACAGCTTACATCTTCCTTAGGTGGTACATACTGGCAACTCAA-TCACA
ATTGCCTCATGGTAAACAGCTCATGACCAGCCTCGGCGAGCGCGCTAAATCCTCATCAGAGGCTCATACTTAAGGTAAGC
AGCAGCACGGCCATGGTGCTCAGTTGGCACGGCCTTGGATCACATCAAAGCCGACCTCGGTCGGGTCTGTCGCCTGCAGC
TCCACCTGGATGCCGTCGAGCTCCCTCTTGAACCTCTCCTTGGAGCTCGCGTAGATCATCTTGCTCCTCACGCGTGCCGT
GTCAGGAGACCTGCATAGACATTCAGAATGAATCGGTTGTTACTACACAGTTGCATCGTTGTGAAGAGTGAGCGGTGAAT
CGAAGAACAGATGGGAGGCATCACTGACCATGCGACGAAGAATATCTTGCTCTTCTGGCAGTTCTCCTCGGT
>chr1D_665
CTTAA---------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------CCCGGAGCACCAGGGTAGGAATCATGAGTAGTAACACTCTTGACGC
TCTCCACTAAATTAAACCACCCAGTCATCTACCCGTGACGGTGCGTCCCAAATGCGTGACACTAGCTTGGTTCCCTTCTT
TCACTATGATGCAGGGATTCTAGAACCTTTTTTTTTTGCGGATCACAAATTCTAGAACCCGGGTGGGTGGGTAAACTGCA
ATGTTCAAACGACACATCGTCTCAAAGCTGTACTCCCTCGGTTCACAAATACAAGATATTTCAACTACGCACATACTGAA
ATGAGCGAACAGACATAATAAACATGATGAAATGCGTCTATATACATTTGAATCAGGAAAAGTTGGTGTAGGACAGCTTA
TAATGGCCGGAAAAATTAAGCGGTTCGATTGAAGCCCTGGGCCCGCCCCGACAAGGCCCCCCAGGGCCGGTCACCGGGTG
CCGGCGGGCCGCGGCCTCTTGGCGGGCTATAAACGTAGCCCGACTCGCTTCTACAACGGGGCCGCACCCGATACGTACGG
GCCGGCCCGATCCCCAGCAGATTC--------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ATTCCCCGGGGCGCACGCAGAAGCCGACAAGCCAT----CACACGTGTCCCCCTCTTATCCACACCGCTCTC
CTCACTCCCCCCTCCGCCACTATTTATGAGCTCCCTGGAGAAGACTTGACTTCCATTCGCATTCGCGACGAGAGAACGA-
AGAAAATAAAAATCCCCAATCCCTCCGCCCACC----CACCACTGCT--------------CCTCGTCCTCCCCTCCCAG
ATCTGCCGGGCACGGCCCTCGCCGGCGGCGTTGGGTCCGCGATGCCTCGGACGGCGCAGGGGGCCTCGCCCCTGCTCCGC
GACGACGCCGGCGCCCTCC---TCCCCTCCGCCATCTGCTGCTCCCACCGCCTCAAGCCCTGGTCTTGGCACCCCAATAT
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------CCACTCCTCC
TAGCGCGCCCTCCCCTTCCTCCCCTC----CCCTTCCCCTTCCTCCTTTCTTCCTCCTCTAGTGGCCGGACTTCTCTGCT
TCTCGTCG-------CTGTCG-------TGCCTCTGCTTGCGGGATTGGATCGCCGGCGCCGGGACCGGGGTACGCCGCT
GACCGACCGATCCCCTCTCTTTTAATCTCGCCGAATCTGGCGCAAACCTGCATCCAGTAATATCA------ATCTTTTAA
ATTACGTATG---CTGCTGTTTAACGTTCATTTGGGATCTAGGACCTTTAATCTGAGCAGGGACCAAAAATAGAGCTAGT
CAGCTACGAGTAGATCCTAGTTTACTGGAATCTTAATAAGCCAGCTCATGATGGCCTTGTGGTTGCTTGATGGACGCAGG
TCTGTGGCTTGTGGTTGCTGTTCTAGGAATCGAG-TTCTTGATGGATGGTCATTCCTGTGATCTTGGGAGTGTGCCAGCA
GTGGCATCTGATGGTGCGGGTACCTCTTCCGCCGTCCCCGGCGGCACTGACATTTCTCCAGGGAAGCATTCAGCCCTGGA
TCGACCTCCGAGGCAGGGGGAGACTGCCGATGGCTCGTTGGAGGCTGGAATGTGTGCGGGTTTCTCCAAGTCGGCCGGCT
TGGGGTTGAAGAAAGACCTCCAGAAGTGCGCAACGTTTCCGTCATC------TGCCGTTGAGGCCGAACAGGAAGATTCA
TGCTGTGACGC---TGATGACGC---GCCGAAGGACGCTCACACTTACCAGCGCTCTGCGTCCTTGCCTGTGAGTAACTT
GTGCTGTGTGTTATCATTTGCCAAAGGATCCA---CAAGTAGTATCATGCTTTCGATCCATTTCCTACTA---TACTAGT
AGACATGAACATCTAGTCTGTGTTGTGTCAGTCATTGTGATCATGATTTTAAAATCTAGCAGCGAGCTAGTTCCCAACTA
GCTGCTAGTATGTACAGGTTTTAAGCTAG---------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------GTAATGATATTTAA
CCA-----------------------------------------------------------------------------
----------------------------------------------------TGAGCATTATAAACCATGTGTTGATATT
TAGTGTGGAG--------AGGTATTGATGGCATGTTGCTTACTGTCTATAATTTCACAAACTGCATGTAATGCAATAGGC
CGGCCTGTTCTTTCCGTTACAAGGAAGTAACAGCAAGTATGACACCACAAGACAATAATACAATGTTGACCTGCATAAAT
CGTTGTGTTCGTTTCTGCAGTTGTGGTATTGCTAAACAACTGGGGTATGCCTTACAATTGTCGGTTATAGTCATTGATTT
GGAAGTGTAG--ACAACCAGAATCGCTTTTCGTTCACGTGAACCAACTCACTAATTATCAACCCCATGTTGACAAGTTAC
ATGTGCTCCATGGAACGTTATTT-GTCGGCAAGCCAGAAATAG----------TTTTGTTGCTATTAATATCGCGTAATG
AGGAAACTAACCAT-CTCTTCCTTTTCTTGCCTCTGCAGCCAACGGTGAAGCTCATCCCTGCTATCAAAGGAAGCCGCCA
AAAGAATGGGATTCCTTTACCAGCAGAGGATCGCCACATCAAATGGGCGGCCGACGTGTATGACCCCCCTGTTTCATCCG
TTTCTCATTCTGTGAACAACAGTTACCAGCGACGGCCCAAGCCCCGTAAGAAGGACAAGACCAAACAGAAAGAGAAGCGG
AAGGCCAGGAACAAGAAAAAAACCAGCAACGCTGCCCAAAATCAAGCTGTGCTCCAGACTCCTGAGTAAGATCGCTAGAA
CATCG-CTGCTGTTAACCTCCCCCGTGAAACTGTAGACAAAGTTTGTTGATTTCTTCACGTTGTGCTTGGCAGACTGGAG
GACCTTGGCACCTCCATTGGTAGGGAGGCTCCAGCCGACCCCGGCAAGCTTGAGACCGAGATGTTGGACTATGGCATCAG
CAGCCAAGAGGCCAAATGCGGAAGCAGCTTCCTGCTCGAGACGGCTGCTAAAATGCATTTCTCCACCGCCGAGGCCTCCT
GAAACGCCCGCGGGAGACTCCAGACTCTGCAGTAGCATCTCTGTTATGTAAATAGGATGGCTGTACATAAATAAATCATG
TGTGTTGTTATCACCATGTACCTCCCGTTGG--------ACGTGATGTGCTAGAGAACTTCTGCCCTAGCGTTATTTCGT
AGCAATCGTCATGAATTTTGGACTGGTTTTTGTATGTAACTATGTATGTTCTGCTGGACAAAACTACCATCAATCTATTA
CTACACAACAGTTGCTGCCTTATCTAAAGATTCGCTGGTCGTGGCCAGTTCTCCATAGTAGTTATGTTTAA-ACTGATCT
GCTGGAGGCAGTGTTCAAAATCAGTATTTATCAGAACACCATTATTCCCCCTGCCCAATCCATCTTCAGATGGATGTTCA
AGTAAAAACATTTGAAATCATTGCATCCTGATGCATATCTACATACAAATGTTGCAAAACATCCCCATGAAACTTAGCAT
CTGATGTTTAACCTAGGTTACTGTCATTTGCCAGTTTGAAATTCACTCCTGTCAGTGAGATGTTTTTTTTTTTTTTTGCA
AAATCAGTTGGATACTTGAAGCAGAGGATGGGGCATGCTAATAGAAGCTTCTGAATTGGATTTATCATCAAAATGTGTTG
GATAATAAGCCTCAGTGGACATCATGGCATCATTAGTTTCAAGAACCAGTGATCCTAGTATGAAGGCTCACAACACAGAA
TCTACCAAAATT-CTACCATGAAGATGCAACTGATCT-----------------------CAGGATCCACGAATCAACAA
CCAGAAAGGATACATTTGTCGTCGCGCCAGTCATGGCTTACATCTTCCTTAGGTGGTACATACTGGCAACTCAAATCACA
ATTGCCTCATGGTAAACAGCTCATGACCAGCCTCGGCGAGCGCGCTAAATCCTCATCGGAGGCTCATACTTAAGGTAAGC
AGCAGCACAGCCATGGTGCTCAGTTGGCACGGCCTTGGATCACATCAAAGCCGACCTCGGTCGGGTCTGTCGCCTGGAGC
TCCACCTGGATGCCATCGAGCTCCCTCTTGAACCTCTCCTTGGAGCTCGCGTAGATCATCTTGCTCCTCACGCGTGCAGT
GTCAGGAGACCTGCATGGACATTCAGAATGAATCGGTTGTTACTACACAGTTGCG-CGTTGTGAAGAGTGAGCGGTGAAT
CGAAGAACAGATGGGAGGCATCACTGACCATGCGACGAAGAATATCTTGCTCTTCTGGCAGTTCTCCTCGGT
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
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-------S----S--------S------------S---S--S--SS--------------S----S--------------
---------S---SSS-S-SSSSSSS------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------S--S--S-SS------S--S--S------S-S-------SS----
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-----------------S---------------------S------------------------------------S---
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---S------S-------SSSS-----------SS---------------------------------------------
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-------------------------------------------------------------------------S--S---
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--------SSSSSSS---S-----------------S-----------------------S------------S------
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------------S-------S-----------------SSSSS-SS-SS-S-----------------------------
--------------------------------------------------------------------------------
-----------------------------------------S--------------------------------------
----------------------------------------S-----S---------------------------------
-----------------------------------------------S-----------------------------S--
---------------------------SS---S---------S-------------------------S-----------
----------------------S--S----------------------------S-----------------
>forward_564
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------GCAACCGACAAGCAAC
AGAG----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2846
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---------------------------------------------GCCGACATTTCTCCAGGGAA---------------
--------------------------------------------------------------------------------
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>forward_2540
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----------------------------------------CGCAAACCCGCATCCATTAG--------------------
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>reverse_4423
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----------------------GCGCCACCTGTAGATGAAGT--------------------------------------
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------------------------------------------------------------------------
>forward_3818
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--------------------------------------ATGACACCGCAAGACACCAT----------------------
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>reverse_5829
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------CGAGCGGTGAAT
CGAAGAAC----------------------------------------------------------------
