>input_sequence_28753
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--------------------------------------------------------ATGGACAAATTTGTGCGAATTTAC
AGTGGTGGGGAGCTGGTGAAGGGTCCAAATGGGGTGGAATTCGGGGACCTCTCGGAGCAGGGTATATGGTTCAAGGCAGC
ACCCACATACAGTGAGCTGATCGACGCCGTGTACAAGAAGCTCGGGCTGGAACCAGCGACACACAATGTCCGCGCACAGG
GAAGGACGAATGTTGGCGGCGGCGCTCATCGGCACTTCATCTTGGTGCCTATCGATGACGATATGTCCTGGAGTAACTAT
GTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCCTGGAGGTTTATGTTCAGACAGAGGAGCGTCCATCTGCAGAGCC
GGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCACTGGATGCGCAGCATCAGAATACCCCACCGCGAGATCCAGAAC
TGGGCGCTTCTCTTTTTGCTCCTTCGATGGTGACCGCCAATGCACCAACCGTTCATCCTCAACATGCTCGGCTACGAAGA
ATAAGGAGCGCCAGAGCCCGTGCTGGCATTCGTGGGCAGGTTGCAGGTGAAGAGGTTCAGTCTGGTCAATACCAGTGTGG
AGCTTCAGGGACAGTTGATACAACTAGCTGTCTTTTAATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAG
CAGGCCAGGTACATCAATGACAACCTGTATCAGTATCATTATATGCAAACAAAATGTGGTATAGTGATAGAGGACTGATT
CTTGTTTCCTTGATTTGGCACAGCATCTAACTGAGCTCAATCCTCGTAACCGTGAGCCTCTCCGGTTTGACAAGCGGTAT
GAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGGCGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACT
CGTCTCTGCACTAGTTGATCGATGGAGACCTGAGACACACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTAC
AGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGGCCATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTG
TACCAGCGTTACCTTGGGAAGGCACCTCCTTCAGATAAGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCTGAGTT
TAATAAGTGCCCTGAAGATGCCGACGAGGAGACCGTAAAGCAGCATGCTAGGGCATACATCCTTAGCCTGGTTGGTGGTC
TATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGTCTATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCA
TACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAA
TCTAACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCATGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGA
AATTCCCAAACGTGGATGAGCTAGAGGATGACAGGGATAGACCCACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACG
TATCGGTCAGCTCCAGCACGTTGCTATGAGCACTTTACAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAG
CCCATATAGGGACGACCGTGTGAAGACACTACATCTTGCACCTATATGTACCCAGGACTCTCATTTGTGGCTAACTCAAG
CACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACACACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGC
CCGCCACCATTTCGGGACACCAGCGTGGAACTCCATTGGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGGTTGTTTT
CAATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCACCCATGAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAA
GGTCCGTAGTGATTGGGCAGATAAGCATAAGTCTTTTGTGGATATGTGGGAAGTAAAGGAGCAGCATGTTATCATGGAAG
AACGACCATACGATCATGCCAACTACATGGATTATTTGCGGTGGTACAGACGGTTGACACGTATCCGCCTCTGCACACCG
AGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGCGAACTGCAACAGCTGATGATGAAGATTCTTTGCGTGCTTCAAA
GCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCAGTGGTAAGATATTCTCCTTGTAAGATGTATTTAATTTTCTCAT
GACGACACACACTATTATCAAGCGCAGAGATTCAGATCATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCTTG
TTTCATCCCAGACTGACAAACTCACTATTCTGGCGAAGGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGC
GCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAACTTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGC
TGCGGTTCCGGATTCAACAACTATTGCAGCTGAACAGGGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACT
CCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGTTCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTG
AACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGAGG---GGTGGACCAGCTCCAAGATGA-----------------
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---------------------------------
>chr3D_1_TraesCS3D01G097200
CCTCAGAGTGCTAGAAGCGCGGTGGTACTTCTCCGGAGGGTGCAGCGGTTGCCGGCCATCTTTGTTTTGTCGATCTGCCG
TTGCCGTCGTTGGCATTTATTTCTCTTTCTTTCTCTCTCCTTTTTTTGGGCTGGTTTGTGCTGCGGCCCCAGCAAGCTTG
TTGTATCAGATGATTGCTTTATAATCTATAAAGCGGGGGAAACCTTTTTTCTTACCCAACAACGGATGTTTGGGCTGTCC
ATTTTGAGGGATTGCGTAGGAGATGCCCTAA--CTATTATTTC------TATTTATTCATCTAGACACAACCTCTGAATT
TTCTCGA-TTTTTTTTGTATGTACTGGAAAGTTATGCGTCATTTCCTTTG--------TAGACGCTGAACTCTCCAGCGT
TGGAGACCAAAAACGCGACAGTGACAAACGCTTGACGCGAGCTCCCACCTACTCGCCGCCACCGTCCCCGGCGACGTCGG
CGCCGCCGCGGAACCCTCCCGCGCCTTTTCGGTAAGCTCCGCCCCTCCCTCCCGGACAAGCGCGCTCGTCCGTCACCCGC
CCTGGAGCCACCCTAGCCCTCTCGCGCGAGCTGTACTCGCCGGAGATTTGGGGGGCGATTTTCAGTTACGTGTTCTTTCG
ATTTCACTTTGGATGCTGGCGCGGCCTCTGTGAGCAGCGGGAACTAAGCTAGGCTGTTGTGTTTGGGCACCCATGGTTTA
GCTTAATTAGCAGTGGGAGTGAAGTGGGGGAA------AAAGTTTAGCTAGGGTTTGCAGCAGCGGGGAACTTGAGACGA
ACGGCGCCTACG-CGATTGGGACCAAGAATACTAGTT-------------------------------------------
-------------------AATGGTGACTCCTCTAGTTAGCTTGGCACCTGGATTGGGCGCATGAACTTTCCCCCCTATT
TTTGCCCAATTTGGTACTCCATGATTTGCCCACATGCTAG---------TCACGCATCACATTTCTTGGTTTATAACGTT
TGTATTGTAAATTTGGGCACCCTTTGAAATGGGTGCATTAATG-TTTGCAGGGGCAATGGACAAATTTGTGCGAATTTAC
AGTGGTGGGGAGCTGGTGAAGGGTCCAAATGGGGTGGAATTCGGGGACCTCTCGGAGCAGGGTATATGGTTCAAGGCAGC
ACCCACATACAGTGAGCTGATCGACGCCGTGTACAAGAAGCTCGGGCTGGAACCAGCGACACACAATGTCCGCGCACAGG
GAAGGACGAATGTTGGCGGCGGCGCTCATCGGCACTTCATCTTGGTGCCTATCGATGACGATATGTCCTGGAGTAACTAT
GTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCCTGGAGGTTTATGTTCAGACAGAGGAGCGTCCATCTGCAGAGCC
GGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCACTGGATGCGCAGCATCAGAATACCCCACCGCGAGATCCAGAAC
TGGGCGCTTCTCTTTTTGCTCCTTCGATGGTGACCGCCAATGCACCAACCGTTCATCCTCAACATGCTCGGCTACGAAGA
ATAAGGAGCGCCAGAGCCCGTGCTGGCATTCGTGGGCAGGTTGCAGGTGAAGAGGTTCAGTCTGGTCAATACCAGTGTGG
AGCTTCAGGGACAGTTGATACAACTAGCTGTCTTTTAATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAG
CAGGCCAGGTACATCAATGACAACCTGTATCAGTATCATTATATGCAAACAAAATGTGGTATAGTGATAGAGGACTGATT
CTTGTTTCCTTGATTTGGCACAGCATCTAACTGAGCTCAATCCTCGTAACCGTGAGCCTCTCCGGTTTGACAAGCGGTAT
GAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGGCGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACT
CGTCTCTGCACTAGTTGATCGATGGAGACCTGAGACACACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTAC
AGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGGCCATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTG
TACCAGCGTTACCTTGGGAAGGCACCTCCTTCAGATAAGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCTGAGTT
TAATAAGTGCCCTGAAGATGCCGACGAGGAGACCGTAAAGCAGCATGCTAGGGCATACATCCTTAGCCTGGTTGGTGGTC
TATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGTCTATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCA
TACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAA
TCTAACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCATGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGA
AATTCCCAAACGTGGATGAGCTAGAGGATGACAGGGATAGACCCACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACG
TATCGGTCAGCTCCAGCACGTTGCTATGAGCACTTTACAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAG
CCCATATAGGGACGACCGTGTGAAGACACTACATCTTGCACCTATATGTACCCAGGACTCTCATTTGTGGCTAACTCAAG
CACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACACACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGC
CCGCCACCATTTCGGGACACCAGCGTGGAACTCCATTGGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGGTTGTTTT
CAATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCACCCATGAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAA
GGTCCGTAGTGATTGGGCAGATAAGCATAAGTCTTTTGTGGATATGTGGGAAGTAAAGGAGCAGCATGTTATCATGGAAG
AACGACCATACGATCATGCCAACTACATGGATTATTTGCGGTGGTACAGACGGTTGACACGTATCCGCCTCTGCACACCG
AGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGCGAACTGCAACAGCTGATGATGAAGATTCTTTGCGTGCTTCAAA
GCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCAGTGGTAAGATATTCTCCTTGTAAGATGTATTTAATTTTCTCAT
GACGACACACACTATTATCAAGCGCAGAGATTCAGATCATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCTTG
TTTCATCCCAGACTGACAAACTCACTATTCTGGCGAAGGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGC
GCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAACTTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGC
TGCGGTTCCGGATTCAACAACTATTGCAGCTGAACAGGGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACT
CCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGTTCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTG
AACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGAGG---GGTGGACCAGCTCCAAGATGAAACCTGCTTGGTGAGTG
ATTCAGAATTACAGTTTTGCCGCTCTTGTTGGACAGCCGTGACATACTTCATTCTATTTTATCATGCTCTCTTTGGTTTG
CCTCTGCTTTAGTTGAACCATCGGGCAAATGATTCTTGGACCATTATTTCTGTGCTTACTGCTTTTGTTTCAAAATTACA
GGGC-TTGTGTGTTTCAGTCATATGAGGCTGTGGGCTGAAGAAAGGCCATGATGGTTAGCGTGTCCAGAAGTTCATGCCT
CTGACAAATTTAACATTGGCTGCGATAGAAGCGATGGAGATCGCAAATCTGCAGTCAGAGGAGTATGGTTCTCGTTTTCT
ATTTTTTCTTGTAGGCAGTCGTAGCATGGATGATGGATCCCGTGTTTATATGTCCATGGTCTGCAATGAA---CTCCTTC
ATTGGCATTGGCACAGCCATATAGTGAA---CTATTGCTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCA
TTGTACCTGACTGGTGGTTACTCCCAGGCTTTGTTGTCCCTGATGCTCCCGGGAGCGCATGTTGCAGAGATTGACAGAGC
AATCGTCTCAGACGACATATGAGGTTTCCTCTGTCACACCTTCAAGGAGTTTCCTCCACATC-TGATTCTCCAGCAAATG
TGATGTATGATCAGCTTCCCTTCGACAGGGGAAAAACAGATAGGTTGTAACCGGTTCTGGATTCGGTCCGATGTTCCCGC
-TTTTCTGGTTTCTGCATCATTGGCGGCGATGACTGCTTCAGGGGATGAGGCTTTAATTTTAGTCCATGGAACCATTTGG
TGTACTGAATTGGGCATGTTGATCTATGTATCTCCTTGGCCATAGCTGCAATTTGCAAAACCAATACTGTTCCTCAAGTA
TCTTT-CCCCCAAACTGGCTGTTCCTACTAGTATCTTAGACCGAATTTGTATTGTGCTAAATGATGTGTAATGTGTTTCT
CTTCTTGAATTCACATGTACAGGGAAACACATG
>chr3A_231
TGC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------GCTGTCG
ATTTTGAGGGATTGCGTAGGAGATGCCCTAA--CTCTATTATTTCTATTTATTTATTCATCTAGACACAACTTCTGAATG
TTCGCAATTTTTTTTTGTATGTACGGGAGAGTCATGTGTCATTTAGTCATTTCCTTACTAGACGCTGAACACTCCAGCGT
CGGAGACCAAAACCGCAGCAGCGGCAAACGCTTGACGCGAGCTCCCACCTACTCGCCGCCACCGTCCCTGGCGACGTCGG
CGCCGCCGCGGAACCCTTCCGCGCCTTTCCGGTAAGCTCCGCCCCACCCTCCCGGACAGGTGCGCTCGTCCGTCGCTCGC
CCCGGAGCCACCATAGCCCTCTCGCGCGAGCTGTACTCGCCGGAGATTTGGGGGGAGATTTTCAATTACGAGTTCTTCCG
ATTTCACTTTGGATGCTGGTGCGGCCTCTGTGAGCGGCGAGGACAAAGCTAGGCTGTTGCGTT-GGGCACCCTTGGTTTA
GC----TTAGCAGTGGGAGTGAAGTTGGGGGA------AAGGTT-AGCTAGGGTTTGCAGCAGCGGGGAACTTGAGACGA
ACGGCGCCTATGGTGATTGGGACCAAGAATCCTAGTTCTTTGGATTCTAAAATACGAATCCTAGTTCTTTCCTTTCTCGC
CCTTGGAGTGGTTCTAGGCAATGGTGACTCCTCTAGCGAGCTTGGCGCCTCGATTGGGGGAACGAAGTTCCTTTTGGTG-
-TTGTCCAATTTGGTGCTCCATGATTTGCCGGAATGAGTACTGACATGCTCATGAATCACACTTTTGGTTTAGATA--TT
TGTATTGCAAATTTGGGCACTCTTTGAATTGGATGCATTCATGTTTGGCAGGGACAATGGACAAATTTGTGCGAATTTAC
AGCGGTGGGGAGCTGGTGAAGGGTCCAAATGGGGTGGAATTCGGGGACCTCTCCGAGCAGGGTATATGGTTCAAGGCAGC
ACCCACATACAGTGAGCTGATTGACGCCGTGTACAAGAAGCTTGGGCTGGAACCGGCGACACACAATGTCCGCGCACAGG
GGAGGACGAATGTTGGCGGCGGTGCTCATCGGCACTTCATCATGGTGCCTATCAACGACGATATGTCCTGGAGTAACTAT
GTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCCTGGAGGTTTATGTTCAGGCAGAGAAGCATCTATCTCCAGAGCC
GGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCACTGGATGCGCAGCATCAGAATACCCCACCGCGAGATCCAGAAC
AGGGTGCTTCTCTTTTTGCTCCTTCGATGGTGACCGTCAATGCACCAACCGTTCATTCTCAACATGCTCGACTACGAAGA
ATAAGGAGCACCAGGGCCCGTGCTGGCATTCGTGGGCGGTTTGCAGGTGAAGAGGTTCAGTCTGGTCAGAACCAGTGTGG
AGCTTCAGGGACAGTTGATACAACTAGCTCTCTTTTAATTGGGCTGTATGACGAGGTTCATCGTGGCCGTGCTTTAGCAT
CAGGCCAGGTAGATCAATGACAACCTGTATCAT-----TTATATGCAAAT-AAATGTGTTATAGTGATAGTCCACTGATT
TCTGTTTCCTTGATTTGGCACAGCATCTAAGTGAGCTCAATCCTCGTAACCGTGAGCCTCTTCGGTTTGACAAGCGGTAC
GAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGGCGAATATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACT
CGTCTCTGCACTAGTTGATCGGTGGAGACCTGAGACACACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTAC
AGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGGCCATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTG
TACCAGCGTTACCTTGGGAAGGCACCTCCTTCAGATAAGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCTGAGTT
TAATAAGTGCCCTGAAGATGCCGACGAGGAGACCATAAAGCATCATGCAAGGGCATACATCCTTAGCCTGGTTGGTGGTC
TATTGTTTCCTGATGCCTCTGGTGATAGGTACACTGTCTATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCA
TACAGTTGGGGTTCTGCCACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAA
TCTGACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCATGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGA
AATTCCCAAACGTCGATGAGCTAGAGGATGACAGGGATAGACCCACGGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACG
TATCGGTCAGCTCCAGCACGTTGCTATGAGCACTTTACAAATGAGTTCGACCTATTAACAGATGACCAGGTTGTTTGGAG
CCCATATAGGGAGGACCGCGTGAAGACACTACATCTTGCACCTATATGTACCCAGGATTCTCATTTGTGGCTAACTCAAG
CACCTCTAGTTTTTTTCTTCATGGTGGAGGTTTACACACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGC
CCGCCACCATTTCGGGACACCAGCGTGGAACTCCATTGGTACGTCCAAAGATATGTCTGTTGACTGTGCATGATTGTTTT
CGATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCACCCATAAGGTTTTCTGATGATTTTGCAGGTGTTGTCGTGGAAA
GGTCCGTAGTGATTGGGCAGATAAGCATAAGTCTTTTGTGGATATGTGGGAAGTAAAGGAGCAGCATGTTATCATGGAAG
AACGACCATACGATCATGCCAACTACATGGATTATTTGCGGTGGTACAGACGGTCGACACGTATCCGCCTCTGCACACCG
AGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGCGAACTGCAACAGCTGATGATGAAGATTCTTTGCGTGCTTCAAA
GCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCAGTGGTAAGATATTCTCCTTGTAAGATGTATTTAATTTTCTCAT
GACGACACACACTATTATCAAGCGCAGAGATTCAGATCATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCATG
TTTCATTCCAGACTGACAAACTCACTATTCTGGCGAAGGAGGCAGCTTCACAAAAGGGGTGCTCCAGAGGCGAATGTAGC
GCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAACTTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGC
TGCGGTTCCAGATTCAACAACTATTCCAGCTGAACAGGGGTCTGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACT
CCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGTTCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTG
GACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGAGGAGGGGCGGACCAGCTCCAAGATGAAACCTACTTGGTGAGTG
GTTCAGAA--ACAGTTTTGCCACTCTTGTTGGACAGTCGTAACATAGTTCCTTCTATTTCATCATGTTTTCTTCAGTCTG
CCTCTGCTGTAGTTGAACAATTGCACAAATGATTCTTGGACCATTATTTCTCTGCTTACTGCTTTTGTTTGAAAATTACA
GGGC-TTGTGTGTTTCAGTCATATAAGGTCGTGGTCTGAAGAAAGGGTGTGATGGTTAGCGACTCCAGAAGTTCATGCCT
CTGACAAGTTTAACATTGGCTGCTATAGAAGCGATGGAGATCGCAAATCTGCAGTCAGAGGAGTATGGTTCTCGTTTTCT
ATTTTTTCTTGTAGGCAGTCGTAGCATGGATGATGGATCCCGTGTTTATATGTCCATGGTCTACAATGAA---CTCCG--
-------TTGGCACAGCCATATGGTGAACTATT---GCTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCT
C--TACCCGACTGGTGGTTACTCCCAGGCTTTACTGTCCCTGATGCGCCCGGGAGCGCATGTTGCAGAGATTGACAGAGC
AATCGTCTCAGACGACATATGAGGTTTCCTCGG-CACACCTTCAAGGAGTTTCCTCCACATC-TGATTCTCCAGCAAATG
TGATGTATGATCAGCTTCGCTTCGACCAGGGAAAAACAGATAGGTTGTAACCGTTTCCGAATTCGGTCCGATGTTCCCGC
-TTTTCTGGTTTATGCATCAGTGGCGGCGACGACTGCTTCAGGGGATGAGGCTTTAATGTTGGTCCATGGAACCATTTGG
TGTACTGAATTGGGCATGTTGACTCATGCATCTCCTTGGCCATAGTTGCAATTTGCAAAACCAATACTGATCTGCAAGTA
TCTTCCCCCCCAAACTGGCTGCTCCTGCTAGTATCTTAGACTGAAATTGTATTGTGCTAAATGATGTGTAATGTGCTACT
GTTCTTGAATTCACATGTACAGGGAAAACATG-
>chr3B_258
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------AGGAGACGCCCTAACTCTATTATTTC------TATTCATTCATCTAGACGCAACTTCTGAAAT
TTCTCCA--TTTTTTTGTATGTCCGGAAGAGCTATGTGTCATTTCCTTTG--------TAGACGCTGAACTCTCCAGCGT
TGGAGACCAAAACCGCAGCAGTGATAAACGCTTGACGCGAGCTCCCACCTACTCGCCGCCACCGTCCCCGGCGACGTCGG
CGCCGCCGCGGAACCCTCCCGCGCCTTTTCGGTAAGCTCCGCCCCTCCCTCCCGGCCAGGCGCGCTCGTCCGTCACCCGC
CCTGGAGCCACCCTAGCCCTCTCGCGCGAGCTGTACTCGCCGGAGATTTGGGGGGCGATTTTCGATTACGAGTTCTTCCG
ATTTCACTTTGGATGCTGGTGCGGCCTCTGCGAGCAGCGAGAACAAAGCTAGGCTGTTGTGTT-CGGCACCAGTGGTATA
GC----TTAGCAGTGGGAGTGAAGTGGGGGGTGGGGGGAAAGCTTAGCTAGGGTTTTCAGCAGCGGGGAACTTGAGACGA
ACGGCGCCTATG-TGATTGGGGCCAAGAATACTAGTTCCTTCGATTCTAATACTAATCCTAGT-TTCTTTCCTTTATTAC
CCTTGGAGTGGTTCTAATCAATGGTGACTCCTCTACTTAGCTTGGCACCTCAATTGGGGGAACGAACTTCCTTTTGGTG-
-TTGTCCAATTTGGTGCTCCATGATTTGCCGGAATGAGTACTGACGTGCTCATGAATCACATTTCTTGGTCTATAACGTT
TGTATTGTAAATTTGGGCACTCTTTGAAATGAGTGCATTCATGTTTGGCAGGGGCAATGGACAAATTTGTGCGAATTTAC
AGCGGCGGGGAGCTGGTGAAGGGTCCGAATGGGGTGGAATTCGGGGACCTCTCCGAGCAGGGTATATGGTTCAAGGCAGC
ACCCACATACAGTGAGCTAATTGATGCTGTGTACAAGAAGCTCGGGCTGGAACCTACAATGCACGACCTTCGTGCACAGG
GGAGGACGAATGTTGGCGGTGGCGCTCATCGGCACTTCATCATGGTGCCTATCGACGACGATATGTCCTGGAGTAACTAT
GTCAAAGCAGTTTTCAATGGCACCGACTGGAATTGCCTGGAGGTTTATGTTCAGGCAGAGGAGCGTCCATCTGCAGAGTC
GGTTTCCCCAGAGCCTGCATTGCTGGACAGTGAACCACCGGATGCGCAGTGCCAGAATTCCCCACCACCAGATCCAGAAC
AGGGCGCTCCTCTTTTTACTCCTTTGATGGTGACAGTCAATGCACCTACCGTTCATCCA---------CGACTACGAAAA
ACAAGGAGCACCAGGGCCCGTGCTGGCATTGGTGGGCGGTTTGCAGGTGAAGAGGTTCAGCCTGGTCAGTACCAGTGTGG
AGCTTCAGGGACAGTTGATACAACTAGCTATCTTTTAATTGGGCTGTATGACGAGGTTCATCGTGCTCGTGCTTTAGCAG
CAGGCCAGGTACATCAATGACAACCTGTATCAATATCATTATATGCAAAT-AAATCTGGTATAGTGATAGTCCACTGATT
TCTGTTTCCTTGATTTGGCACAGCATCTAAGTGAGCTCAATCCTCGTAACCGTGAGCCTCTTCGGTTTGACAAGCGGTAC
GAACGTTACCTTAGGCCAGCTGGGTTGATGGGGTTGGCGAACATTTGCAGGGCTGGACTGCCCTCCATTGATCGTGCACT
CGTCTCTGCACTAGTTGATAGGTGGAGACCTGAGACACACACTTTTCACATGCCTTGTGGTGAGATTACAATCACACTAC
AGGATGTTGCGATGATTCTTGGGCTACCTATCTCTGGACATGCTGTCATTGTAAACAAAACAGAGTCCTACATTGAATTG
TACCAGCGTTACCTTGGGAAGACACCTCCTTCTGATAAGTCCCGTCCTGGGTTGAGGGTTGCATGGGTCAGAGCCGAGTT
TAATAAGTGCCCTGAAGACGCCGACGAGGAGACCGTAAAGCAGCATGCAAGGGCATACATCCTTAGCCTGGTTGGTGGTC
TATTGTTTCCTGATGCCTCTGGTGATAGGTACACCGTATATCCCTTTCCGCTGATAGCTGATCTTGAGAACATTGGTTCA
TACAGTTGGGGTTCTGCTACTCTGGCATATCTCTACAGGGCAATGTGTGATGCTTGCAGGAGGCAATCAGATCAAAGTAA
TCTGACTGGTTGCCTTCTGCTCCTTCAGTTCTGGTCATGGGAGCGCTTCCCAATCGGCAGGCCAGATATGCTAAAGCCGA
AATTCCCAAACGTCGATGAGCTAGAGGATGACAGGGATAGACCAACAGTTGGTCTCAGATGGGTTGTGGGGGCGTGCACG
TATCGGTCAGCTCCAGCACGTTGCTACGAGCACTTTACAAATGAGTTCGACTTATTAACAGATGACCAGGTTGTTTGGAG
CCCATATAGGGACGACCGCGTGAAGACACTACATCTTGCACCTATATGTACCCAGGATTCTCATTTGTGGCTAACTCAAG
CACCTCTAGTTTTTTTCTTTATGGTGGAGGTTTACACACCGGAGAGAGTGATGCGTCAATTTGGTCTCCATCAGGAATGC
CCGCCACCATTTCGGGACACCAGCGTGGAACTCCATTGGTATGTCCAAAGATATGTCTGTTGTCTGTGCATGATTGTTTT
CGATTCGAGGAAGTTGGAAATTATGTACCAGTAGCCACCCATAAGGTTTTCTGATGATTTTGCAGGTGTTGCCGTGGAAA
GGTCCGTAGTGATTGGGCAGATAAGCACAAGTCTTTTGTGGATATGTGGGAAGTAAAGGAGCAGCATGTTGTCATGGAAG
AACGACCATACGATCATGCCAACTACATGGATTATTTGCGGTGGTACAGACGGTCGACACGTATCCGCCTCTGCACACCA
AGAATAAGTAATGGCCACCAGGATGGGGCATCCGTGCGAACTGCAACAGCTGACAATGAAGATTCTTTGCGTGCTTCAAA
GCTTCGGTACACCCCCAGAGCTCATCTGATCCACTCAGTGGTACGATATTCTACTTGTAAGATGTGTTTAATTTTCTCAT
GACG-CACACATTGTTATCAAGCGCAGAGATTCAGATCATCTTCTTCTGCATACACATGAATATTTCTGACACCTCCATG
TTTCATCCCAGACCGACAAACTCACTATTCTGGCGAAGGAGGCAGCTTCACAAAAGGGCTGCTCCAGAGGCGAATGTAGC
GCTTTCATTGAGCGAGTCACTAGAACGTGTGTAGAACTTGTTGGGGAACTTGGCGGGTCATCACTTTGCGACATTGCTGC
TGCGGTTCCAGATTCAACAACTATTGCAGCTGAACAGGGGTCCGAGGGCCAGAGGGACACAGAGGATGAGTTAAATAACT
CCATGGTGCCTGATCAGGAGAATGAGTCGGGCCCTGTTCGTGAGAAGCGGACTCGATTCCAGGTTGATCATACACAAGTG
AACAGCAGGGTCCATTCAAGGTCACCAAGCAAGAGGAGGAGGGGTGGACCAGCTCCAAGATGAAACCTGCTTGGTGAGTG
ATTCAGAATTACAGTTTTGCCGCTCTTGTTGGACAGCCGTGACATACTTCATTCTATTTTATCATGTTCTCTTTGGTCTG
CCTCTGCTTTAGTTGAACCATCGCGCAAATGATTCTTGGACCATTATTTCTCTGCTTACTGCTGTTGTTTGAAAATTACA
GGGCTTTGTGTGTTTCAGTCATGTAAGGTCGTGGTCTGAAGAAAAGGTGTGATGGTTAGCGACTCCAGAAGTTCATGCCT
CTGGCAAGTTTAACATTGGCTGCTGTAGAAGCGATGGAGATCGCAAATCTGCAGTGAGAGGAGTATGGTTCTCGTTTTCT
ATTTTTTCTTGTAGGCAGTCGTAGC-------ATGGATCCCGTGTCTATATGTCCATGGTCTACAATGAACTCCTCCG--
-------TTGGCACAGCCATATGGTGAACAACTATAGCTCATTCATCCCATTTGTGGGACTGAAACTTGAAGTGAACTCA
TTCTACCTGACTGGTGGTTACTCCCAGGCTTTGTTGTCCCTGATGCTCCGGGGAGCGCATGTTGCAGAGATCGACAGAGC
AATCGTCTCAGATGA---------TTTCCTCGG-CACACCTTCAAAGAGTTTCCTCCACATTTTGATTCTCCAGCGAATG
TTATCTGCGATCAGCTTCGCTTTGACCGGGGAAAACCAGATAGGTGGAAACCGGTTCTGGCCTCGGTCCGATGTTCCCTG
TTTTTCTGGTTTCTGTATCGTATGCGGCGATGGCTGTTTTAGGGAATGAGGCTTCAGTGTTGGTCCATGGAACCATTTGT
TGTGCTGAATTGTGCATGTTGATCCATGTA--------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------S
-----------------------------------------------------------------------S--------
-----S------------------S---S-------S-------------------------------------------
------------S---SS--------------------------------------------------------------
----------------------------------------------------------S---------------------
----------------------------------------------------------------S-----S------S--
-------------------S-------------------S----S------------------S--------S-------
--SSSS------------------------S-------------------------------------------------
----------S--S------------------------------------------------------------------
--------------------------------------------------S-------S-S-S------S-SSSSSSSSS
S---S----------S--------------SSS---SSSS------------S-S-------------------------
--------------------S------------------S------S---------------------------------
--S--------------------------------------------------S--------------------------
---------------------S--------------------------------S-------------------------
-S---------------------------------------S-------------S------------------------
------------------------------------------------------S-------------------------
--------------------------------------------------------------------------------
S-----------------------------------S---------------------------------S---------
---------S----S----------------------S-S----------------------------S-----------
-----------------------------S--------------------------------------------------
--------------------------------S----------------SS-------------------SSS-------
SS----------------------------S------------------------------S-----------------S
--------------------------------------------------------------------------------
---------------------S----------------------------------------------------------
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------------------------------------------------S-------------------------------
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--------------------------------------------------------------------------------
---S----------------------------------------------------------------------------
-------------S------------------------------------------------------------------
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------------------S--------------------------------------S----------------------
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------------------------------------------------------------------------S-------
-S----------------------------------------S-------------------------------------
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------------------------------------------------------S-------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
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---------S----------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------------------------------------------S----------S--
-----------------------S---------------------------S------------------S---------
------------------------S---SS----S-----------SSS------------SS-----------------
-------S---------------S--------------------------------------------------------
--------------------------------------------------------------S--------------SSS
SSSSSSS---------------S------------S--------------------------------------------
--S-----------------------------------------------------------------------------
-------------------------------S-S----------------------------------------------
------------------S-------S-----------------------------------------------------
----------------------------------------------------------S--S------------------
------------------------S--------------------S-----------------------S--SS------
----S----------------S----S--------------S---S-----------------------------S-S--
S--------------------------SSSSSS
>forward_69
-------------------------------------------------TGCCGGCCATCTTTGTTTTG-----------
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>reverse_1902
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-------------------------------------------------------------CCGGTTTGACAAGCGGTAT
G-------------------------------------------------------------------------------
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>forward_70
--------------------------------------------------GCCGGCCATCTTTGTTTTGT----------
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>reverse_1920
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-------------------------------------------------------------------------------T
GAACGTTACCTTAGGCCAGC------------------------------------------------------------
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>forward_1902
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------------------------------------------CTCGTAACCGTGAGCCTCTC------------------
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>reverse_3438
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-----------------------------------------------------------------------------TTG
TTTCATCCCAGACTGACA--------------------------------------------------------------
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>forward_2574
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--------------------------------------------------------------------------AGCCGA
AATTCCCAAACGTG------------------------------------------------------------------
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>reverse_4238
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-----------------------------------------------------------------------------TTC
ATTGGCATTGGCACAGC---------------------------------------------------------------
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---------------------------------
