>input_sequence_28751
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ATGGAGGGCGGCATGGACGCGAGCTTGGACTTCCTGGAGCTGGAGGCCCATCTGGTGTTCGATCTCGGCGACGCCGATAG
GTACGTACGTGATGAGATGAGATGAACACG----GTGGTTCATGAAATCACGACCGCTCTGCTCCTCAATC---------
--------TTGCATTGCTGACGACG-CTGTTTCTCTCTCTGCCCCTGCCTAGCAAACGTTGGATGAGCCTGGCTGACTGC
TGCAGCTCGTACCTGCCGGCCGAGGACTCGCTCTCCGGCCTCGACTCCTCCTGCTACAACGACCCCACCAGCTCGCCGGA
CGGGGCCACCAGCTCGCGGTCCACGGCGTCGAC---------CAGGGCGAGCAAGAACATCGTCGAGGAGAGGGACCGGC
GCAGGCGGCTCAACGAGAAGCTCTACGCCATCCGCGGCGTCGTCCCAAACATCACCAAGGTTTGCTTCTTCATACTAGTA
GGTGAAGAGGACTTGCGTCTACTTCATACTCCCTCTGTTTCTAAATATAAGCTTTTTTTTAGAGATTCTAGTATGAACTA
CATACGGACATACTTTAAAGTATAAATTCACTCATTTTGCTTCGTATGTAGTTTATATTGAAATCCCTAAAAGGGCT-AT
ATTTAGGAACGGAGGAAGTACTAGCTAGTACAGTTTGATTTGATTGAGTTTTCTGTTAAC--TTGTGCCACGATTAGATG
GACAAGGCGTCCATCATCCAGGACGCCGTCGCATACATCGAGGAGCTGCAGGAGCAGGAGCGCCGGATCCTCGCCGAGGT
GTCCGACCTCGAGGCAGGCAGCTGCACCGCCGTGGTGGTCAAGTCGGAGGCCTCCACCGGGAGCGAGGGGGTGGAGGACG
CCGGCGTTGGCTTCTCGACGCGGAAGAAGATGAGGAGGACTGCT------TCCTCCTCCATCAACGACACCGTCACTTCC
CCTGCCACGCATCCGATCCTCCTTGAGGTAAATTTTGCTTAGTCTGCAAAAACATACTGATCGAGAAGTCCAAATGTAAA
TAAAATGATCGAGAGGTCCAAATGTAAATCTAGTGAGAATATTTCTGACGAAAAGAATA-AAAAACCTTGTGTAACAACT
AAAATGTTAGCAAAGAGAAATATGTTGTTAATTATATCCAAACATTTTGTAGACAACGAAAAGCTTCCAAGATAACATGG
CAAATGTGAAACATTTTGGGGCAACTCTATGAAACAAGACTGAGGATGTCAAAACAAACCATTATTGAATAACCGCGTGG
TTTATCATTTCTGCAGCTGGAGGTGAGGCCTATAGCGGAGAAGCTGGCGGTGATGAGCATGAGGCACGACAATGCGCAGA
ACGTCATGGCGAAGATGTACAAGGCACTCGATTCACTCTGTCTCAAGGTCATCACCTCAAGTGTGACCGTCGTGGACGGC
CGCACAGTCCACACCATGTTCATCGAGGTAATCACATCCGTGTTTTGCTGCATTTGTTCTCCAATTAATTTCTCCTCTAG
A-TCTCCTCCTGATTTCATGTACGAAAAGCTTGCTCCCATCTCTTTCGCTCGGTCGCTCTCGAATTCTTTCAGTAATGTC
ACATGAATGACATCATAAGGGATGGCACTCTTGGTTATGGGAGTTC----------------------------------
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--------------------------------------------GTAAATTTATGAGTTTTGTTTTACTTCACAAGGGAA
CCAAGTCTTTATTTGGCTTCAAAGGAAAATTACGGCAATTATAGTGGAGAAACACAATTCATACAGAA-ATTTTCTCTTC
AGTCCACTTGAAACGCAGGA------------------------------------------------------------
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-----------------------TAATGAAAGACCCGAAAGAAACAATGGGCACTGATAGAGAATCATTCACCATTTGAA
TCTTCACAAGTTCCCCACATCACCGACACCTCATCAGTCGGTTAGAGGCATGGGCACCACTTATCAATGCTTGGTGTTCA
TTTCTTATATGTTCTTTGTTAGGTTTGT----------GTG---------GTTGAGATGGTGTCATGCGGAACATAGATA
TTTTGGCTCCATCACTTCCCTGGCATTGTTATCATGGTCTAGGTCTACCATATAGAGCCAATGGTTCTCATTAGTAGTCG
CTTCATACTTTTGATATTCTTCCTCCTCAATGCCGACTAGGCATCAGTTTGACAAGTTTTCCTTGTGAGATGTGCGACCC
GTACATGGCTCATTAAAAAGAAATCTATTCTTGAGGTGTGCGGCTCTTAAGTCTCTTTAAACCTCATGAGGTTGGCTCTT
TAGACCTTATGAAGTTAGTCCAGCTTGTATGGAATTTGTAACTTCATCAGCAGGTACACGGGGAAACATCAAGATGGGAT
CTAAAGATGTCGGCTTCGAAGGACCTTGACATGATCTTTGGTCTTGTTGTTGGTGTTCATTTCAGGTCTTTCGATCTAGT
GGACTTTGTTTCATGAATTAATAGAGCCGTACCGCTGTTCTGAAAAAGGGATTACCAACAAACTTATCGCATAACATATT
TTTCCCAGTTACGTTGATCAATGATCGTGTTGCCAGTTCATATGACTATGTATTTTTTTAGTCACACTTCTTTCATACGA
CTCATTAGATATACGTTGGCTTGACTTAAGCTTGTGAACACATGGATTACACATATGCATTTGGTAGCATGCACATATTT
TCATTATATTTTCTGTCAATATCAGCAGCCATTTATATTCTTTGAAAATCTAGTTATTATATTTTTCAGACGGAAGAAAT
GGATAGTGTTGAGACGATCAAGGAGATGGTACAGGCTGCACTCAGCCATCTCGATTTCTCGATGTGA-------------
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>chr3B_1_TraesCS3B01G018400
TGACTCTATTATCATCTCCAGTAATTCCATATATAACCTAGGAACTGAAATGGCACGAGGCATTTTTATTTAACTATTTT
TTAAAACCATGCAAGAGGGTGTTCCCAAAATTTCATGTCGATAGGAAAAAGAAAGAAATACAAAGTGCGTGGCCTGATTT
TTTTTAATATGGAAACAAGGCCAAAGACCTAAAGAGAACAAACAATGAGAAAATAAGTAAAGACAACTAAGCGGGCCCTG
CACCAGGTGAAAGAGAGCATCACCACCAGCATATCCACCCACTGAAGAGAAGTGAGTGGTTTCGTCGAAGATGCCTTCAA
AAAGGAAAATATTGTGCTCATGGGTCAGGATCCTCTGCAGTACTATACAATGTTGTAGGGTCACTGTCGTGTGGATCCGG
CCCCACATGTCATTCGCACTACAGCACCGTACATTACAGCAGAGGATCTCAACCCTGTGCCCATAGGCAGCGTTGCCACC
CCTTGTTCAAGACTAAGCTTTCGCCCAGAGTCACGGACGTCCACGTAGCTGAAACAAAGTAAAAGGGTCTGGCCACGCCA
TCTTCAAATTCAAGAGCCTCC-------------------------------------ATAAATTGATGTGTCACCTTCA
AATTCAAGAGCCTCGTGTGAAACTTATCAACCAAACAAACTTATGAGAACTTTTCAACCAACCTGAACCTGTCCATGGGG
-CAAGAGGCCGACTTATT-TTGGCTCTATGCGCCATGTTAATTATTGCCAGGCGCCAAAACTGATGGACCCAAACATACG
GAGATATTTACGGGACAATGGTAGCGCACAGATTCAGATTCCATCTCGAATTTTATGGGGGAGCAATCCGAAAATGGAGA
AGCAGCCAATTACCGTGCAGTAGGCACGATGGCTTGGTCGGCAGGGCGCCAGGTGGCACCAGGATAGGATACTGCTCTCG
CTGGCCACGTCGGCCAAGGCGCACAGCAAAACCCTCGAAGGAGAGAGGGAGAGGCCAGAGAGAGAA-GCAGAGCAGAGCA
ATGGAGGGCGGCATGGACGCGAGCTTGGACTTCCTGGAGCTGGAGGCCCATCTGGTGTTCGATCTCGGCGACGCCGATAG
GTACGTACGTGATGAGATGAGATGAACACG----GTGGTTCATGAAATCACGACCGCTCTGCTCCTCAATC---------
--------TTGCATTGCTGACGACG-CTGTTTCTCTCTCTGCCCCTGCCTAGCAAACGTTGGATGAGCCTGGCTGACTGC
TGCAGCTCGTACCTGCCGGCCGAGGACTCGCTCTCCGGCCTCGACTCCTCCTGCTACAACGACCCCACCAGCTCGCCGGA
CGGGGCCACCAGCTCGCGGTCCACGGCGTCGAC---------CAGGGCGAGCAAGAACATCGTCGAGGAGAGGGACCGGC
GCAGGCGGCTCAACGAGAAGCTCTACGCCATCCGCGGCGTCGTCCCAAACATCACCAAGGTTTGCTTCTTCATACTAGTA
GGTGAAGAGGACTTGCGTCTACTTCATACTCCCTCTGTTTCTAAATATAAGCTTTTTTTTAGAGATTCTAGTATGAACTA
CATACGGACATACTTTAAAGTATAAATTCACTCATTTTGCTTCGTATGTAGTTTATATTGAAATCCCTAAAAGGGCT-AT
ATTTAGGAACGGAGGAAGTACTAGCTAGTACAGTTTGATTTGATTGAGTTTTCTGTTAAC--TTGTGCCACGATTAGATG
GACAAGGCGTCCATCATCCAGGACGCCGTCGCATACATCGAGGAGCTGCAGGAGCAGGAGCGCCGGATCCTCGCCGAGGT
GTCCGACCTCGAGGCAGGCAGCTGCACCGCCGTGGTGGTCAAGTCGGAGGCCTCCACCGGGAGCGAGGGGGTGGAGGACG
CCGGCGTTGGCTTCTCGACGCGGAAGAAGATGAGGAGGACTGCT------TCCTCCTCCATCAACGACACCGTCACTTCC
CCTGCCACGCATCCGATCCTCCTTGAGGTAAATTTTGCTTAGTCTGCAAAAACATACTGATCGAGAAGTCCAAATGTAAA
TAAAATGATCGAGAGGTCCAAATGTAAATCTAGTGAGAATATTTCTGACGAAAAGAATA-AAAAACCTTGTGTAACAACT
AAAATGTTAGCAAAGAGAAATATGTTGTTAATTATATCCAAACATTTTGTAGACAACGAAAAGCTTCCAAGATAACATGG
CAAATGTGAAACATTTTGGGGCAACTCTATGAAACAAGACTGAGGATGTCAAAACAAACCATTATTGAATAACCGCGTGG
TTTATCATTTCTGCAGCTGGAGGTGAGGCCTATAGCGGAGAAGCTGGCGGTGATGAGCATGAGGCACGACAATGCGCAGA
ACGTCATGGCGAAGATGTACAAGGCACTCGATTCACTCTGTCTCAAGGTCATCACCTCAAGTGTGACCGTCGTGGACGGC
CGCACAGTCCACACCATGTTCATCGAGGTAATCACATCCGTGTTTTGCTGCATTTGTTCTCCAATTAATTTCTCCTCTAG
A-TCTCCTCCTGATTTCATGTACGAAAAGCTTGCTCCCATCTCTTTCGCTCGGTCGCTCTCGAATTCTTTCAGTAATGTC
ACATGAATGACATCATAAGGGATGGCACTCTTGGTTATGGGAGTTC----------------------------------
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--------------------------------------------GTAAATTTATGAGTTTTGTTTTACTTCACAAGGGAA
CCAAGTCTTTATTTGGCTTCAAAGGAAAATTACGGCAATTATAGTGGAGAAACACAATTCATACAGAA-ATTTTCTCTTC
AGTCCACTTGAAACGCAGGA------------------------------------------------------------
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-----------------------TAATGAAAGACCCGAAAGAAACAATGGGCACTGATAGAGAATCATTCACCATTTGAA
TCTTCACAAGTTCCCCACATCACCGACACCTCATCAGTCGGTTAGAGGCATGGGCACCACTTATCAATGCTTGGTGTTCA
TTTCTTATATGTTCTTTGTTAGGTTTGT----------GTG---------GTTGAGATGGTGTCATGCGGAACATAGATA
TTTTGGCTCCATCACTTCCCTGGCATTGTTATCATGGTCTAGGTCTACCATATAGAGCCAATGGTTCTCATTAGTAGTCG
CTTCATACTTTTGATATTCTTCCTCCTCAATGCCGACTAGGCATCAGTTTGACAAGTTTTCCTTGTGAGATGTGCGACCC
GTACATGGCTCATTAAAAAGAAATCTATTCTTGAGGTGTGCGGCTCTTAAGTCTCTTTAAACCTCATGAGGTTGGCTCTT
TAGACCTTATGAAGTTAGTCCAGCTTGTATGGAATTTGTAACTTCATCAGCAGGTACACGGGGAAACATCAAGATGGGAT
CTAAAGATGTCGGCTTCGAAGGACCTTGACATGATCTTTGGTCTTGTTGTTGGTGTTCATTTCAGGTCTTTCGATCTAGT
GGACTTTGTTTCATGAATTAATAGAGCCGTACCGCTGTTCTGAAAAAGGGATTACCAACAAACTTATCGCATAACATATT
TTTCCCAGTTACGTTGATCAATGATCGTGTTGCCAGTTCATATGACTATGTATTTTTTTAGTCACACTTCTTTCATACGA
CTCATTAGATATACGTTGGCTTGACTTAAGCTTGTGAACACATGGATTACACATATGCATTTGGTAGCATGCACATATTT
TCATTATATTTTCTGTCAATATCAGCAGCCATTTATATTCTTTGAAAATCTAGTTATTATATTTTTCAGACGGAAGAAAT
GGATAGTGTTGAGACGATCAAGGAGATGGTACAGGCTGCACTCAGCCATCTCGATTTCTCGATGTGAGAAGA--CCCACC
GAAGTCCATGAGTCACTGATGAAGATTAAGTGTCTCAAAGAATGTGTAATGGGCACCCCAACTACCGATGCTCCATCATT
CTCACTACATCATGGAGGAGAGC-CGTGGTTTGGTCCATTCCGGTAATACAGCATTCTAATAAAAGTGACTACAATTGCA
ATAACTTATATGGCCCAAAAAATAGTAATTGTGCCTAGAATTTATGTAAGCTCGTAGTATTAGTACTCCCTCCCTTTGGA
TTTGTAAGTGCATCTCCATACATAATTATAGAACTTCAGTTCAGCTTACATCTTTGTGCACCGCAACTACTGGTATGAAA
TCCGCACTTTA--------------------------------------------------------------ACTTTAC
CATGTTCGGCACTGCAGATTCTTTTTACATATTGATCAGGGTAAAAGGTAATATAATCTCGAAAGGCGATGGTGTGACCC
TCGTTATCACGATCACAGTGAGTTGCAACTTGCAGGTCCAGGTAGAGTATCAAGAGCGGCTCCATGTATATTGGAACAGC
CACACACTTCCGCGATAGCGGGAGCTCGCCATCGATGACCTCCGCCTTGTTCTCTTCTCCACAAGAAAAGAGCACGACAC
TCTCGCCGTCGTAGAGTTCGTGGTGCGCGGTGATCG--------------------------------------------
----------------AGGTTGACGTACACGTTGGCCTGTATAGCCTTGTGCAGCGCCATGAAGGTCATGTCTATCTTGC
GGCCGTGTCTTGTGGAGATGGTGCGGGTGATGACTTTGTTGCACGCGTACGGGTTCACCGTGAACGAGAAGTTTCCATTG
TAGTGATCATCGGCTTCGCCGTTGTCCCCCGGGATCTTGATTTTGATCCAGAAGGTGTCCGTCAGGGCGCTGCTCGACTC
GAGTATCAGATTATTCTGTGGATCGACGGTGTGTCCTCTCTGCGATGACCAGAAGTGGCCACCAAAGCCGTCGGTGGCGG
CGAAGGAACCCGTGAAGCGGAAGCGAGGGCGCACGATGAAGAGCTCCACCCGGTACTTAGAAAAGGAGTAGG
>chr3D_499
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------------------TTTCGCCCAGAGTCACCCACG-CCACGTAGCTGAAACCATGTGAAAGGGTCTGGCCACGCCA
CCTTCAAATTCAAGAGCCTCGATAAATTGATGTGTCACCTTCAAATTCAAGAGCTTCAATAAATTGATGTGTCACCTTCA
AATTCAAGAGCCTCGTGTGAAACTTATCAACCAAACAAACTTATGAGAACTTATCAATC------AACCTCTCCATGGGG
-CAAGAGGCCGACTTATTTTTGGCTCTATGCGCCATGTTAATTATTGCGAGGCGCCAAAGCTGATGGACCCAAACATACG
GAGATATTTACGGGACAACAGCAGCGCACAGATTCAGATTCCATCTCGAATATTATGGGGGAGCAATCCGAAAATGGAGA
AGCAGCCAATTACCGTGCAGCAGACACGATGGCTTGGTCGGCAGGGCGCCAGGTGGCACCAGGATAGGG---TGCTCTCG
CTCGCCACGTCGGCCATGGCGCACAACAAAACCCTCGAAGGAGATAGACGGAGAGG--------------GAGCAGAGCA
ATGGAGGCCGACATGGACGCGAGCTTGGACTTCTTGGAGCTGGAGGCCCATCTGGTGTTCGATCTCGGCAACGCCGATAG
----GTAAGTGATGAGATGAGATGAACACCGCGCGTGGTTCAAGAAATCACGACCACTCTGCTTCTCAATCTCTCTTGCG
TCAAACCATTGCATTGCTGACGACGTCTGTTTCGCTCTG---CCCTGCCTAGCAAACGTTGGATGAGCCTGGCGGATTGC
TGCAGCTCGTACCTGCCGGCCGAGGACTCGCTCTCCGGCCTCGACTCCTCCGGCTACAACGACTCCACCAGCTCGCCGGA
CGGCGCCACCAGCTCGCGGTCCACGGCGTCGACGAGGGCCACTAGGGCGAGCAAGAACATCGTCGAGGAGAGGGTCCGGC
GCAGGCGGCTCAACGAGAAGCTCTACGCCATCCGCGGCGTCGTCCCAAACATCACCAAGGTTTGCTTCTTCATACTAGTA
GGTGAAGAGGACTTGCGTCTACTTCATACTCCC-------CTAAATATAATC--TTTTTTAGAGATTCCAGTATGAACTG
CATACGGACATATTTTAGAGTGTAGATTCACTCATTTTGCTCCGTATGTAGTTTATATTGAAATCCCTTAAAGGGCTTAT
ATTTAGAAACGGAGGAAGTACTAGCTAATACAGTTTCATTTGATTGAGTTTTCTGTTATAATTTGTGCCACG-TTAGATG
GACAAGGCGTCCATCATCCAGGACGCCGTCGCATACATCGAGGAGCTGCAGGAGCAGGAGCGCCGGATCCTCGCCGAGGT
GTCCGACCTCGAGGCCGGCGGCTGCACCGCCGT---GGTCAAGTCGGCGGCCTCGACCGGTAGCGAGGGGGTGGAGGACG
CCGGCGTTGGCTTCTCGCCGCGGAAGAAGATGAGGAGGACTGCCTCCTCCTCCTCCTCCATCAATGACGTCGTCACTTCT
CCTGCCACGCATCCGGTCCTCCTTGAGGTAAAGTTTGCTCGCCGGAGAAGTTGGGTAGCATTTTTCGGGTCTT-TGTATG
TAAATTGATCGAGAAGTCAAAATGTAAATCTAGTGAGAATATTTCTGATGAAAAGAATA-AAAAACCTTGTGTAACAACT
AAAATGTGAGCAAAGAGAAATATGTTGTTAATTATATCCAAACATTTTATAGACAACGAAACGCTTCCAAGATAACATGG
CAAATGTGAAACATTTTGGGGCAACTCTATGAAACAAGACCGAGGATGTCAAAACACACCATC---GAATAACCGTGTGG
TTTATCATTTCTACAGCTGGAAGTGATACCCATAGCGGAGAAGCTGGCGGTGGTGAGCATGAGGCACGACAATGCGCAGC
ATGTCATGGCGAAGATATACAAGGCGCTCGATTCGCTCCGTCTCAAGGTCATCAACTCAAGTGTCACCGTCGTGGACGGC
CGCACAGTCCACACTATGTTCATCGAGGTAACCATCCGTGTGATTTGCTGCATTTCTCGTCCAATTAATTTC--CTCTAT
TTTCTCCACCTGATTTCATGAACGAAAAGCTTGCTCCCATCTCTTTCGCTCGGTCACTCACAAATTCTTTGAGTGATGTC
ACATGGATGACATCATAAGGAATGTCACTGTTAGTTATGGGAGTTT----------------------------------
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--------------------------------------------GTAAATTTAGGATCC-TGTTTTACTTCACAAGGGAA
CCAAGTCCCTAGTTGGTTTCAAAGGAAAATTACGGCA---ATAGTGGAGAAACACAATTCATACAGAAGATTTTCTCTTC
AGCCCACTTGGAACGTAGGATAGCCTCAAGAATCTCACATGATAACAACTTGTTTCCTTATTTATTTTTTAGTAAAACCA
CAGGATTCCCAACATCCACTCCAACCTCCCCCCCCCCCCAACCCAAAGTCACGCTCGTTGATGGCAGCCGTTGCTCGCCA
TTGAACAGCCGAAAGAGAGAAAGAAGGAAAGAGAAAATGTGTAATCATGTGTTTCCTATTTCTCTATTTATTTAATCATA
TTCCTATTTATTTTCCTATCTTGTGCTCCAAACCAGGCCTAAGAGGGTTGCCATCGTCTCTTGTTCTTCAACCCTGTTCA
ATTTTTGTATGTTGTGCATTTTTTGCTTTTATCATTGGATAACTGAGACGAA-TTGCACATACTCGGAATCCTGCCCAGC
AGGTGGGAGATATTTGAAAAAACATTGTGAAAAAACGTAAATTTATAGGCATGATTTGAAGGGTTGGATACAATTTTTCT
TGTCTATTGTTTAGTTTCATGGAGACGATTATGAAAAATGTTACTATAAAAATAACCATAAAAGAATGTATGATCTAACA
AATTTTCATCG-ACATGTCATCCTAATGGAAGACCCCAAAGAAACAATGGGCACCGATAGACAATCATTCACCATTTCAA
TCTTGACAAGTTCCCCACATGACAGACACCTCATCAGTCGGTGAGAGGCAAGGGAACCACTTATCAATGCTTGGTGTTCA
TTTCTTATATGTTCTTTGTTAGGTTTTGTGCGCTTTCGGTG---------GTTGAGATGGTGTCATGCGGAACATAGATA
TTTTGGCTCTATCACTTCCCTGGCATTGTTATCATGGTCTAGGTCTACCATATAGAGCCAATGGTTCTCATTAGTAGTCG
CTTCATACTTTTGATATTCTTCCTCCTCAATGCCGACTAGGCATCAGTTTCACAAGTTTTCCTTGTGAGACGTGCGACCC
-TATATGGCTCATTAAAAAAAC----ATTCTTGAGGTGTGCGGCTCTTAAGTCTCTTTAAACCTTATGAGGTTTGCTCTT
TAGATCTTATGAAGTTAGTCCAGCTTGTATGGAATTTGTAACTTCATCATCAGGTACTCGGCGAAACATCAAGATGGGAT
CTAAAGATGCCGGCTTTGAAGGACCTTGACATGATCTTTGGTCTTGTTGTTGGTGTTCATTTCAGGTCTTTCGATCTAGC
GGACTTTGTGTCATGAATCAATAGAGCCATACTGATGTTCTGAAAAAGGGATTACCAGCAAACTTATTGCCTAACATATT
TTTCCCAATTACATTGATCAATGATCGTGTTGCTAGTTCATATGGCTATGTATTTTAGTCACACTTG--CTTTCATACAA
CTCATTAGACATACGTTGGCTTGACTTAAGCTTGTGAACACATAGATTACACATATGCATTTGGTAGCATGCACATAATC
TCACTATATTTTGTGCCAATATCAACA-CCATTTATATTCTTTGAAAATCTAGCTATTATATTTTTCAGACGGAAGAAAC
GGATAGTGTTGAGACGATCAAGGAGATGGTACAGGCTACACTCAGCCATCTCGAATTCTCGATGTGAGAAGAAGCCCACC
AAAGTCCATGAGTCACTGAGGAAGATCAAGTGTGTCAAAGAATGTGTGATGGGCACCCCAACTACCGATGCTCCATCATG
CTCACTAGATCATGGAGGAGAGCGCGTGGTTTGGTCCAATCTGGTATTACAACATTCTAATAAAAGTGACTACAATTGCA
ATCACTTATATGGCCCAAAAAATAGTAATTGTGCCTAGAATTTATGTAAGCTCGTAGTATTAGTACTCCCTCCCTTTGGA
TTTGTATGGGCACCTCCATACATAATTATAGAACTTCAGTTCAGCTTACAACTTTGTGCACCGCAACTACTGGTATGAAA
TCCGCACTTTAACTTTACCATGGTCGGCATTGCAGATTCTTTTTACATATTGATCAGGGTAATCCGCACTTTAACTTTAC
CATGGTCGGCATTGCAGATTCTTTTTACATATTGATCAGGGTAAAAGGTAATATAATCTCGAAAGGCGATGGTGTGACCC
TCGTCATCACGATCATAGTGAGTTGCAACGTGCAGGTCCAGGTAGAGTATCAGGAGTGGCTCCATGTATATCGGAACAGC
CACACACTTCCGTGATAGCGGGAGCTCACCATCGATGACCTCCGCCTTGTTCTCTTCTCCACAAGAAAAGAGCATGACAT
TCTCACCCTCATAGAGTTCGTGGTGCGCGGTGATCTCGCCATAGACATGGTAGACGGTGCCGCTCCCAGTGGCACCGGGA
GGT----GCGAGATCAAGGTTGACGTACACGTTGGCATGTATAGCCTTATGCAGCGCCATGAAGGTCATGTCTATCTGGC
GGCCGTGTCTTGTGGAGATGGTGTGGGTGATGACTTTGTTGCACGCGTACGGGTTCACCGTGAACGAGAAGTTTCCCTCG
T-------------------------------GATCTTGATTTTGATCCAGAAGGTGTCCGTCAGGGCGCTGCTCGACTC
GAGTATCAGATTATTCTGTGGATCGACGGTGTCTCCTCTCTGCGAGGACCAGAGGTGGCAACCAAAGCCGTCGGTGGCGG
CGAAGGACCCCGTGAAGCGGAAGCGAGGACGCACGGTGAAGAGCTCCACCCGATACTGAGAAAAGGAGTAGG
>chr3A_592
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--------------------------------------------------------------------GTGTCACCTTAA
AATTCAAGAACCTCGTG--AAACTTATGAACCAAATAA-------AGAACTTATCAATC------AACCTGTCCATGGGG
TCAAGAGGCCGACTTATT-TTGGCTCTATGCGCCGTGTTAATTATTGCCAGGCGCCAAAGCTGATGGACCCAAACATACG
GAGATATTTACGGGACAACAGCAGCGCACAGATTCAGATTCCATCTCGAATTTTATGGGGGAGCAATCCGAAAATGGAGA
AGCAGCCAATTACCGTGCAGTATGCACGATGGCTTGGTCGGCAGGGCGCCAGGTGGCACCAGGATAGGGTACTGCTCTCG
CTCGCCACGTCGGCCATGGCGCACAACAAAACCCTGGAAGGAGAGAGGGAGAGGGAGAGGGAGCAGTGCAGAGCAGAGCA
ATGGAGGCCGACATGGACGCGAGCTTGGACTTCTTGGAGCTGGAGGCCCATCTGGTGTTCGATCTCGGAGACGCCGATAG
GTACGTACGTGATGAGATGAGATGAATTCAAAATATTGCAT------------------TGCTTCTCAATCTCGCGTCAA
ACT----ATTGCATTGCTGACGACGTCTGTTTCGCTCTG---CCCTGCCTAGCAAACGTTGGATGAGCCTGGCTGACTGC
TGCAGCTCGTACCTGCCGGCCGAGGACTCGCTCTCCGGCCTCGACTCCT---GCTACAACGACTCCACCGGCTCGCCG--
-------------------TCCACGGCGTCGGCGAGGGCCACCAGGGCCAGCAAGAACATCGTTGAGGAGAGGGACCGGC
GCAGGCGGCTCAACGAGAAGCTCTACGCCATCCGCGGCGTCGTCCCAAACATCACCAAGGTCTACTTCA-----------
--------------------------------------------------------------------------------
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------------------TACTAGCTAGTACAGTTTGATTTGATAGGGTTTTCTCTTAATTTGTGCGG--CG-TTAGATG
GACAAGGCGTCCATCATCCAGGACGCCGTCGCATACATCGAGGAGCTGCAGGAGCAGGAGCGCCGGATCCTCGCCGAGGT
GTCCGACCTCGAGGCCGGCGGCTGCACCGCCGTGGTGGTCAAGTCGGAGGCCTCCACCGGTAGCGAGGGGGTGGAGGACG
CCGGCGTTGGCTTCTCGCCGCCGAAGAAGACGAGGAGGACTGCC------TCCTCCTCCATCAACGACCCCGTCACTTCT
CCTGCAACGCATCCGGTCCTCCTTGAGGTAAAGATTGCTCGCCGGAGAAGTTGAGTAGCATTTTTCGGGTCTT-TGTATA
TAAAATGATCGAGAAGTCCAAATGTAAATCTAGTGAGAATGTTTCTGACCAAAAGAATAAAAAAAACTTGTGTAACAACT
AAAATGTTAGCAAAGAGAAATACTCTATG----------AAACATTTTATAGACAACAAAACGCTTCCAAGATAACATGG
CAAATGTGAAACATTTTGGGGCAACTCTATGAAACAAGACC-AGGATGTCAAAACACACCATT---GAATAACCGCGTGG
TTTATCATTTCTACAGCTGGAGGTGATGCCCATAGCGGAGAAGCTGGCGGTGGTGAGCATGAGGCATGACAACGCGCAAC
ACGTCATGGCGAAGATGTACAAGGCGCTCGATCCGCTCCGTCTCAAGGTCATCACCTCAAGTGTCACCTTCGTGGACGGC
CGCACAGTCCACACAATGTTCATCGAGGTAGC--CATCCGTGATTTGCTGCATTTCTCGTCCAATTAGTTTC--CTCTAG
T-TCTCCTCCTGATTTCATGAACGAAAAGCTTGCTTCCATCTCTTTCGCTCGGTCGCTCTCGAATTCTTTGAGTGATGTC
ACATGAATGACATCATAAGGAATGTCACTGTTGGTTATGGGAGTTCATCTATACTAATATAAAAAGACCTAAATGGGCAG
ATCCAATTAATCTCGGCCATCAAAACATGCAATCCAACGACCTAGACTGCTTCAATGTCGAGCGCTCAACACGTTTAGCG
TGCAGTTAATTTCATGTCAAATATAGTCTAATCACATAATAACACGCAAATAATATCATACTTAATATCCGCATGCACTT
AATATACTTTCAAATTAACGTGCATTGCACGTACACATTGACTAGTAAATTTAGGAGTCATGTTTTACTTCACAAGGGAA
CCAAGTCCCTATTTGGTTTCAAAGGAAAATTACGGCA---ATAGTGGGGAAACACAATTCATACAGAA-AGTTTTCTNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNN-------------------TGCTCCAAACGAGGCCTAAGAGGGTTGCCATCATCTCTTGTTCTTCAACCCTGTCCA
ATTTTTGTATGTTCTGCATTTTTTGCTTTTATCATTGGATAACTGAGACGATTTTGCACATGCTCGAAATCCAGCCCA-C
AGGTGGGAGATATTTGAAAAAGCATTGTGAAAAAAAGTAAATGTATAGGCATGATTTGAAGGTTTGGATACAATTTTTCT
TGTCTATTATTTAGTTTCATGGATATGATTATGAAAAATATTATTGAAAAAATAACCATAAAAGAATGTATCATCTAACA
AATTTTCATCTAACATGTCATCCTAATGGAAGACGACAAAGAAATAATGGGCACCAGTAGAGAATCATTCACCATTTCAA
TCTCCCCAAGTTCCCCACATCACCGACACCTCATTAGTCAGTGAGAGGCAAGGGAACCACTTATCAATGCTTGGTGTTCA
TTTCTTATACGTTCTTTGTTAGGTTTGT----------GTGCTTTCGGCGGTTGAGATGGTGTCATGCCGAACATAGATA
TTTTGGCTCCATCACTTCCCTGGCATTGTTATCATGGTCTAGGTCTACCATATAGAGCCAATGGTTCTCATTAGTAGTCG
CTTCATACTTTTTATATTCTTCCTCCTCAATGCTGACTAGGCATCATTTTGACAAGTTTTCCATGTGAGACGTTCGACCC
GTACATGGCTCATTTAAAAAAAA-----TCTTGAGGTGTGCAACTATTAAGTCTCTTTAAACGTTATGAGGTTGGCTCTT
TAGACCTTATGAAGTTAGTCCAGCTTGTATGGAATTTGTAACTTCATCATCAGGTACATGGGGAAACATCAAGATGGGAT
CTAAAGATGTCCGCTTCGAAGGACCTTGACATGATCTTTGGTCTTGTTGTTGGTTTTCATTTCAGGTCTTCTGATCTACT
GGACTTTATTTCATGAATCAATAGAGCCATGCCGCTGTTCTGAAAAAGGGATTGCCAGCAAACTTATTGCATAACATAAT
TTTTCCAATTACGTTGATCAATGACCGTGTTGCCAGTTCATATGACTATGTATTTTAGTCACACT--TTCTTTCATACGA
CTCATTAGACATGCGTTGGCTTGACTTAAGCTTGTGACCACATGGATTACACATATGCATTTGCTAGCATGCACATAATT
TCACTACATTTTGTGCAAATATCTGCAGCCATTTATATTCTTTGAAAATCTAGTTATTATATTTTTCAGATGGAAGAAAC
GGATAGTGTTGAGACGATCAAGGAGATGGTACAGGCTGCACTCAGCCATCTCGAATTCTTGATGTGAGAAGAAGCCCAAA
AAAGTCCATGAGTCACTGATGAAGATTAAGTGTCTCAAAGAATGCGTAATGGGCACCCCAACTACTGATGCTCCATCATG
ATCAAT--ATCATGGAGGAGAGCGCGTGGTTTGGTCCAATCTGGTACTACAACATTCTAATAAAAGTGACTACAACTGCA
ATCACTTGTATGGCCCAAAAAATAGTAATTGTGCCTAGAATTTATGTAAGCTCATAGTATTAGTACTCCCTCCCTTGGGA
TTTGTGAGGACATCTCCATACATAATTATAGAACTTCAGTTCAGTTTACATCTTTGTGCACC-CAACTACTGGTATGAAA
TCTGCACTTTAACTTTACCATGG---------------------------------------------------------
-----TCGGCATTGCAGATTCTTTTTACATATTGATCAGGGTAAAAGGTAATATAATCTCGAAAGGCGATGGTGTGACCC
TCGTCATCACGATCATAGTGAGTTGCAACGTGCAGGTCCAGGTAGAGTATCAGGAGCGGCTCCATGTATATCGGAACAGC
CACACACTTCCGCGATAGCGGGAGCTCGCCATCGATGACCTCCTCCTTGTTCTCTTCTCCACGAGAAAAGAGCACGACAC
TCTCACCGTCGTAGAGTTCGTGGTGCGCGGTGATCTCGCCATAGACATGGTAGACGGTGCCAGTCCCAGTGGCACCGGCC
GGGAGGCGCGAGATCAAGGTTGACGTACACGTTGGCCTATATAGCCTTGTGCAGCGCCATGAAGGTCATGTCTATCTTGC
GGCCGTGTCT-------------------ATGACTTTGTTGCACGCGTACAGGTTCACCGTGAACGAGAAGTTTCCATTG
TCGTGATCATTGGTTTCGCCGTTGTCCCCCGGGATCTTGATTTTGACCCAGAAGGTGTCCGTCAGGGCGCTCCTCGACTC
GAGTATCAGATTGTTCTGTGGATCGACGATGTCTCCTCTTTGCGAGGACCAGATGTGGCAACCAAAGCCGTCGGTGGCGG
CAAAGGACCCCGTGAAGTGGAAACGAGGGCGCACGGTGAAGAGCTCCACCCGGTACTTAGAAAAGGAGTAGG
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS----------------SS---S---------------S-S--S-------------------
S-------------------S-----------------------------------------------------------
----------------------------------------------------S----S-SSSSSS---------------
-----------------------------------------------------------S--------------------
------------------SS-S----------------------------------------------------------
--------------------------------------------------------------------S-----------
--S-------------S--------S----------------------------SSSSS-SSSS-S--------------
-------S--S----------------------S----------------------------------------------
-----------------------------S------------S------------S-------S----------------
---------------------------------S----SSSS--------------------------------------
---------------------------------------------------S-----------S----------------
---S----------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------SSSSSSS----------S-SS--------------S----------S
------------S----S---S--S----------------S--------------------------S-----------
------S----------------------------------------------------S------------S-------
--------------------------------------------------------------------------------
---------------S---S----------------------------------------S-------------------
-----------------S-------------------------S------------------------S----------S
---------------S----------------S------SSSSSSSS--SSSS-SSSSS--SSSSSS-SS-SSS----S-
--------------S-----------------------------------------------------------------
------------------------------------------------S------------S------------------
----------------------------------------S---------------S------SSS--------------
------------S-------------S---S---------------------S--------------------------S
-------------------------S--------S---S-------------------------S---------------
--------------S----------------S----------S------------S-SS-------------SS------
S-------------------S-------------------------------------------------S---S-----
--------------------S---S----S--------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------S----SS--------------------
-------SS-------S--------------------SSS----------------------------------------
--S-------S----S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------S-------S-----------------S----------------------S--
------------------------------------------S-------S---S-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------S---------
-------------------S---SSS--------------------------------------S---------------
-------------------------------------------------S------------------------------
--------------------------------------------------------------------------------
------------------S---------S----------------------------S---------S------------
-------S------------------------------------------------SS-SSSSSSSS-------------
---------S-------------------------------------------------------------------S--
---S--------S--S---------------------------------------------------------------S
------------------------------------------------------S-------------------------
S------------------------------------------------------------------------------S
-------S------------------------------S--S----S----S----------------------------
--S-----------------------------------------------------------------------------
--------S-----------------------------------------------------------------------
--------------------------------------------------------------------------------
----S------S--------------------------------------------------------------------
----S----------S-------------S----------------------S------------------S--------
--------------------------------------------------------------------------------
----S------------------------------S--------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
-S--------S--S------------------------------------------------------------------
--------------------------------S------------S-------S-----S--------------------
-------S---------------------------S------------------------------------
>forward_1026
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------GGGAGAGGCCAGAGAGAGAA--------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_2373
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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----------------------------------------------------ATGAGCATGAGGCACGACAA--------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>forward_2347
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------TTTCTGCAGCTGGAGGTGAG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------
>reverse_4728
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------CATCATGGAGGAGAGCCGTG-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------
