>input_sequence_28701
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------------------------------------------------------ATGGAATCAGGTGAAAACAACATGGG
CTCGAATGATGGACCAAACAGCAAAGCTAGCTTGCCTGCGAGGCAACGCTTGCGGTGGACAGATGAGTTGCATGAACAAT
TTGTGGAGGCTGTTACTCAACTGGGCGGTCCTGATAGTACGTAACCACATTGCAACTGTGCTTCATTACTTCTTTTATAT
GATACTATTTCTTC-TTACTGTGTAATCACTTTATGGGACTACATAAAATAGTTTATTTGAAATCTAAAGGTGATATAAT
TTTACATTAATTAATTTATATTACATGACATTGTTATATCTAGTGAAGTTTTTTAGTATAGTTTGAAAATACCAGACGTT
CTTAAA-GTGACAATAGCATGTAAATATATGATGCCGTGGAACTCAAAACATCGTTTCTAAGTAGAAAGCTTATATATGG
TTTTAAGCTATCACATTATCTCAACTCAACATCATATAAGCTTGGAATAAGCATGGCTTAGAGTTTAAGGTGTTAGATTA
ACTTCTATTCTCAAGTAAAAGAGATGAGATGTATAAGCTACCATGCATTTACATGAGAATGTACCAAGCAAGAAGCCCTT
TTAAGTGAGAGAATTGTAGCTTGATTTTTAAGACTTTCAAATCACTTGGGTGAGGATCTCCATCCATCTAAGCAATTAAT
AACTTACTTTTATCAGTATTTTCTTATGTTATTATAAAAGTAAAAGGTACAAATGTACTTATGTTGCACTTATCTGTCAG
TTATGTGCATTTGTACCTTTATTTGCTACAGTAATTATATAGGCTTATTATGCTTCTGCTGGCACTT-TTTTTTGAACTT
CGCTTCTGCTGACACTTGAATTCCTCAAATGCAACAGGAGCAACTCCTAAAGGAGTTTTGAGAATTATGGGTACACCAGG
ATTAACAATATACCATGTGAAAAGTCACCTACAGGTACATATTGTTTAACAGTGCCACTTGGCCTTTGGTAATATTTGTT
AACTCTTAATTTCTGATATTGAATCCC-CTATTACTGTTTTCAGAAATACAGGCTAGCAAAGTACATTCCCGACTCTTCA
GCTGATGGTAGGTGAACACACTTCTCATATACTTGGTATTGTGGTATTTGTTTCAGTTCTTTCCTAATATGTATCTCTCG
TGTAGGTAACAAGGCTGATAACAAAGATCCAGGGGATTCACTAGCAGGACTTGATGGATCCTCGTATGTATACACATATG
GCCAGTTATAATCTCCATTAAATAGTAACTTATGTAAACTGTGACTGGCATGGCATGGGATGAAAGTACTGCAATGTATG
CCGTATTCTACAATGCACTAAGAAGTTCATCTAGCATAGTCAACTCTCTTATTTTACTACCCTTGAGGTTTGCATGCCGC
TCGAC--ACACATGCTAACTGTGGTTCCTCAGTTATTAGAAACAT-AAAAAATTAGGGTGCAACCATAATCTAATTGAAA
TCTCTCTTATTTTTATACTGGATGAGTAATTTCTGCAAAATGAAAAGTGTTCAATTTATTTTATTCCCTTCATCAATTTT
TGGCCTTGAATATCATCAGGTACACAAATGCTACGCAGCAATGAAAACACGTTGATATAGCTTCAAACCGATCCATATGC
ATTTTCATCTTCCTTTATTTGAAAGATGTAATATCGTTGCTTTTTGTTGATTTATCCATGCTATGCTATCCGTAAGGGGC
AAGTCTTTTGCTAATGTACAGCGACCTTTTTCTTGGAGACTTCAATTTCACTTTTGGAATTAGTGTCTTTCAGTTGATGC
TGCTCCCCTGTTTTCCTCAGTTTTTCCTAGGGACGTTTGATCGTCGAGCCTTTTTCTTTACAGTGGAATGCAGATATCTG
AAGCCCTGAAGCTGCAGATGGAGGTCCAAAAGCGGTTGCATGAACAGCTCGAAGTAAGTTTTTTGTTTGCG---------
--GTCCAAAAGCAAATGCTTGTAAAATACTTTATCT------------------------------------TCTAAAAA
CAGAGGAAAATTCTTAGTAAGCTAGAGGCAAAAACAAGTCCGTTCCTAATATTGTCAACTTCCACGCTTCTTCTAGTAAT
GGCTGCGAAGTCTGCACTAGAGACATTGTTTGTGTTTCGGTTTGTAATCTCATTCATATTTTCAAACTTGCAAATTAAGT
AAATAGTTAGGTTTAATTGACCAGATGCATTAGTTGCATGCTTGCATAGCAGTAAATTCATCAATAACCTACAATTATAT
TAAGTAGGGATCAATGATAAGATGTGCTGATAACATTTTCTTTAGGTACAAAGGCAGCTGCAGCTGCGAATCGAGGCACA
GGGAAAGTACCTTAAGAAAATCATAGAAGAGCAGCAGCGTTTCGGTGGCGGTGGTATAAAGTCTGAAACACCTGGTGCAG
GAGCAACTGTCACAGTGTCGAGCGATCAGTTCCCCGACTCTGAGAGGACAGACCCCTCGACTCCTGCACCGACATCTGAA
TCTGCATCTCAAGGTGGGGCTTTCAAAAGAGACAGTGGAAGCCAGACTGAAGCAATCAAGAGCCCATGTCATGATGAACC
GCTGCTAACAGCAGATTCCAACTGTCATCCCGGTTCTCCTACTCTCAGTCCAAAGCACGAGAGGGCAGCAAAGAGGCAGC
GAGGCAGCGATGCTGAATTCCCGGAGGCCGAGTTATCCCTTCCGCAGCATATCTTCGAGTCGAGCTCGGGGCCAGAGTTC
CAGCAATGTTCGGTGCCCTACTACTCGGGTCATTAG--------------------------------------------
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>chr5B_1_TraesCS5B01G176300
TTGGAACGTTTGCTACAGGTTTCTTTGAAAATAT---CAGCCCCTTTGGTCCATAACGTGGCGGGAATCATTCTATTATG
ATTCTTTAGATTATTCACAATTGATGGCCGTTTGGATGACTAGAATGGCTCATTCGAGCCACCACCTCGCCTATTTGTAT
CCGTGCTGTTTTGTCTTGCTTAGTGGCCACGAAATTGACCTGCCTGAGCTGATCCAGGATCGCAAGCATGAGTATGCGAT
GGTGCACCTTCCCAGCTGTGGGCACAAATATTCCAATATCAGTTTGTGTTGCCTCTGTGACTCTTATGATTTGATTGATC
TGCCTTGTAAACAGAACGACCAGTGGAATGATGAGATAAAGGTATTAGCGTCGATGAAAACAGAAAATGGCTGTTCCCTC
TAGCACTCTGGGTAGAATATGAGATTTTGACCTGTTTGCCATGGGCAAATGACATCTCTGTAGGCTGTTAGTGCTCTCAG
TATTATCTACTCCCTCCGTCCCATAATGTAAGACGTTTTTTGACACTACACTAGAGTCAAAAAAACGTCTTACATTATGG
GACAGAGGGAGTATGTACTAAATTAAATTAAACACTCTCTGTTGTCTTAAATCCAATGTGTGGTTAGTCTTCCCTGAAAT
ACCCGGGTTCTGTATGAAAATTGCCATATCTCACTGCTTTTTCTCTGAGGTGTCTTAATAGGGCATTAACTACCAAGCAA
-TCATCATACATGTTGCAAGCTGGTGGTCTTTCTCAGTAGATAGGGAGTGAAATATGTCACGGCACCT-------TCATA
TTAAGTAGT--TATTTTGTACTTTCATTAATGCAAATTGTTGGTGATCACTGCATGTTAGACTACCCTTTCTATTAATAT
AGCATCGTTCTCTTAAGGAAATAAAATAGCCTTTTCTATTTGGTTCCTTATATCATT-TTTCCCTAGATGATGAACAGTA
TATCCACCAGCACTAGAGTCTAATCATAGCCACTCAGTCGCTCACCTGCAGCAAATGGAATCAGGTGAAAACAACATGGG
CTCGAATGATGGACCAAACAGCAAAGCTAGCTTGCCTGCGAGGCAACGCTTGCGGTGGACAGATGAGTTGCATGAACAAT
TTGTGGAGGCTGTTACTCAACTGGGCGGTCCTGATAGTACGTAACCACATTGCAACTGTGCTTCATTACTTCTTTTATAT
GATACTATTTCTTC-TTACTGTGTAATCACTTTATGGGACTACATAAAATAGTTTATTTGAAATCTAAAGGTGATATAAT
TTTACATTAATTAATTTATATTACATGACATTGTTATATCTAGTGAAGTTTTTTAGTATAGTTTGAAAATACCAGACGTT
CTTAAA-GTGACAATAGCATGTAAATATATGATGCCGTGGAACTCAAAACATCGTTTCTAAGTAGAAAGCTTATATATGG
TTTTAAGCTATCACATTATCTCAACTCAACATCATATAAGCTTGGAATAAGCATGGCTTAGAGTTTAAGGTGTTAGATTA
ACTTCTATTCTCAAGTAAAAGAGATGAGATGTATAAGCTACCATGCATTTACATGAGAATGTACCAAGCAAGAAGCCCTT
TTAAGTGAGAGAATTGTAGCTTGATTTTTAAGACTTTCAAATCACTTGGGTGAGGATCTCCATCCATCTAAGCAATTAAT
AACTTACTTTTATCAGTATTTTCTTATGTTATTATAAAAGTAAAAGGTACAAATGTACTTATGTTGCACTTATCTGTCAG
TTATGTGCATTTGTACCTTTATTTGCTACAGTAATTATATAGGCTTATTATGCTTCTGCTGGCACTT-TTTTTTGAACTT
CGCTTCTGCTGACACTTGAATTCCTCAAATGCAACAGGAGCAACTCCTAAAGGAGTTTTGAGAATTATGGGTACACCAGG
ATTAACAATATACCATGTGAAAAGTCACCTACAGGTACATATTGTTTAACAGTGCCACTTGGCCTTTGGTAATATTTGTT
AACTCTTAATTTCTGATATTGAATCCC-CTATTACTGTTTTCAGAAATACAGGCTAGCAAAGTACATTCCCGACTCTTCA
GCTGATGGTAGGTGAACACACTTCTCATATACTTGGTATTGTGGTATTTGTTTCAGTTCTTTCCTAATATGTATCTCTCG
TGTAGGTAACAAGGCTGATAACAAAGATCCAGGGGATTCACTAGCAGGACTTGATGGATCCTCGTATGTATACACATATG
GCCAGTTATAATCTCCATTAAATAGTAACTTATGTAAACTGTGACTGGCATGGCATGGGATGAAAGTACTGCAATGTATG
CCGTATTCTACAATGCACTAAGAAGTTCATCTAGCATAGTCAACTCTCTTATTTTACTACCCTTGAGGTTTGCATGCCGC
TCGAC--ACACATGCTAACTGTGGTTCCTCAGTTATTAGAAACAT-AAAAAATTAGGGTGCAACCATAATCTAATTGAAA
TCTCTCTTATTTTTATACTGGATGAGTAATTTCTGCAAAATGAAAAGTGTTCAATTTATTTTATTCCCTTCATCAATTTT
TGGCCTTGAATATCATCAGGTACACAAATGCTACGCAGCAATGAAAACACGTTGATATAGCTTCAAACCGATCCATATGC
ATTTTCATCTTCCTTTATTTGAAAGATGTAATATCGTTGCTTTTTGTTGATTTATCCATGCTATGCTATCCGTAAGGGGC
AAGTCTTTTGCTAATGTACAGCGACCTTTTTCTTGGAGACTTCAATTTCACTTTTGGAATTAGTGTCTTTCAGTTGATGC
TGCTCCCCTGTTTTCCTCAGTTTTTCCTAGGGACGTTTGATCGTCGAGCCTTTTTCTTTACAGTGGAATGCAGATATCTG
AAGCCCTGAAGCTGCAGATGGAGGTCCAAAAGCGGTTGCATGAACAGCTCGAAGTAAGTTTTTTGTTTGCG---------
--GTCCAAAAGCAAATGCTTGTAAAATACTTTATCT------------------------------------TCTAAAAA
CAGAGGAAAATTCTTAGTAAGCTAGAGGCAAAAACAAGTCCGTTCCTAATATTGTCAACTTCCACGCTTCTTCTAGTAAT
GGCTGCGAAGTCTGCACTAGAGACATTGTTTGTGTTTCGGTTTGTAATCTCATTCATATTTTCAAACTTGCAAATTAAGT
AAATAGTTAGGTTTAATTGACCAGATGCATTAGTTGCATGCTTGCATAGCAGTAAATTCATCAATAACCTACAATTATAT
TAAGTAGGGATCAATGATAAGATGTGCTGATAACATTTTCTTTAGGTACAAAGGCAGCTGCAGCTGCGAATCGAGGCACA
GGGAAAGTACCTTAAGAAAATCATAGAAGAGCAGCAGCGTTTCGGTGGCGGTGGTATAAAGTCTGAAACACCTGGTGCAG
GAGCAACTGTCACAGTGTCGAGCGATCAGTTCCCCGACTCTGAGAGGACAGACCCCTCGACTCCTGCACCGACATCTGAA
TCTGCATCTCAAGGTGGGGCTTTCAAAAGAGACAGTGGAAGCCAGACTGAAGCAATCAAGAGCCCATGTCATGATGAACC
GCTGCTAACAGCAGATTCCAACTGTCATCCCGGTTCTCCTACTCTCAGTCCAAAGCACGAGAGGGCAGCAAAGAGGCAGC
GAGGCAGCGATGCTGAATTCCCGGAGGCCGAGTTATCCCTTCCGCAGCATATCTTCGAGTCGAGCTCGGGGCCAGAGTTC
CAGCAATGTTCGGTGCCCTACTACTCGGGTCATTAGCCTCCCGGCAGCTACATTTTGGCAGCATCTTAGAATGGTGTCTT
CTAAGGGGATATGTTGTATGTTGACAAAAGTTGTTAGGTGTTTTCAGGTGGTTGTTTACATGATGCATACTTACACATGA
CATCTATATCTTGCATTTGTAGCGCCTTGACTTGTAACCTTATTGGCAGATGAGTTGACCAGCTTGGGTGGGGTGGGCAC
TGTTAGCCTG-TTTTTACATGCTATGTTTTCTACTCTTGTTCTTGAGTCTTAACACCAAGTTTATCTTGATATGCTACTC
CTATTTGTTATGAGGGTGATTGATGATCAGAAACAACGCGTTTACCAGTGTTTTCATGTCAGTGCCCCTTTTATCAGTGT
GTACTTCGTACAACATATAATTATAAAATAATACCATCAAAAGTCTAGACAAAATCCTAAGTCAACATCTACAAACTTTT
TTGGAAGAACATATTTTTTTAGCGGTAAAACTAAGTTTTATTGATCGAAAGCCACAAAATGTGGAATACAAACTTGAAAG
AACATCTACAAACTTGAAACTTGTGTACTCCCTCCATTTGGACATATAGGGCCTAATTTGTATTTTGAGATTTACTTTGA
TCGTCAATAAAAGTAATACTACATGAGATGTTTGCTATAAAAATATATCATTAGAAACTACTCTCTCCGTTCCTAAATAT
TTGTCTTTTTAGAGATTTCAAATTGACTACCACATACTATGTATATAGACATAATTTAAAGTGTAGATTCACTCCTTTCT
ATACGGAGTCACTTGTTCAAATCTCTAGAAAGACAAATATTTAGGAATGGAGGGAGTAGTATTTTTCAATATGAATTCAA
CAATATACTTTTTGTGGCATCTATTAATTCAATGGTATGAGGCCAACTCCAACGCACGACCCCAAATGGTCTGACCGCGT
CCGTTTGGGGCAAAACGGACACAAATCGCGGCCCAACGTGCGGGAGCAAAAGGACAAACGTCCATTTTTTGTTCGCC
>chr5D_1
TTGGAACGTTGGCTAGAGGTTCCTTTGAAAATAT---CAGCCCCTTTGGTCCATAACGGGGCGGGACTCATTCTATTATG
ATTCTTTAGATTATTCGCAATTGATGGCCGCTTGGATGACTAGAATGGCTCATTCGAGCCACCACCTCGCCTATCTGTAT
CCGTGCTGTTTTGTCTTGCTTAGTGGCCATGAAATTGACCTGCCTGAGCTGATCCAGGATTGCAAGCATGAGTATGCGAT
GGTGCACCGTCCCAGCTGTGGGCACAAGTATTCCAATATCAGTTTGTGTTGCCTCTGTGACTCGAATGATTTGATTGATC
TGCCTTGTAAACAGAACGACCAGTGGAATGATGAGATAAAGGTATTAGCATCGATGAAAACAGAAAATGGCTGTTCCCTC
TAGCATTCTGGGTAGAATATGAGAATTTGAGCTGTTTGCTATGGGCAAATGACATCTCTGTAGGCTGTTAGTGCTCTCAG
TATTATCA------------------------------------------------------------------------
--------------GTACTGAATTAAATTAAACACTCTCCGTTGTCTTAAATCCAATGTGTGGTTAGTCTTCCCTGAAAT
ACCTGGGTTCTGTATGAAAATTGCTATATCTTACTGCTTTTTGTCTGAGGTGTCTTAATAGGGCATTAACTACCAAGCAA
ATCATCATACATGTTGCAAGCTGGTGGGCTTTCTCAGTAGATAGGGAGTGAAATATGTCACGGCACCTTCATGCTTCATA
TTAAGTAGTTATATTTTGTACTTTCATTAATGCAAATTGTTGGTGATCACTGCAAGTCAGACCCCCCCTTCTATTAAAAT
AGCATGGTTCTC-TAATGAAATAAAATAGCTTTTTCTATTTGGTTCCTTATATCATTTTTTCCCTAGATGATGAACAGTA
TATACACCAGCACTAGAGTCTAATCGTAGCAACTCAGCCGCTCACCTGCAGCAAATGGAATCAGGTGAAAACAACATGGG
CTCGAATGATGGACCAAACAGCAAAGCTAACTTGGCTGCGAGGCAACGCTTACGGTGGACAGATGAGTTGCATGAACAAT
TTGTGGAGGCTGTTACTCAACTTGGCGGTCCTGATAGTACGTATCTACACTGCAATTGTGCTTCATTACTTCTTTTATAT
GATACTATTTCTTC-T-ACTGTGTAATCACTTTATGGGACTAGATAATATAGTTTATTTGAAATCTAAAGGTGATACCAT
TTTACATTAATTCATTTATATTACATGACATTGTTATATCTAGTGAAGTTTTTTAGTATAGTTTGAAAATACCAGACGTT
CTTAAA-GTGACAATAGCATGTAAATATATGATGCCGTGGAACTCAAAACATTGTTTCTAAGTAGAAAGCTTATATATGG
TTTTAAGCTGTCACATTATCTCAACACAACATCATATAAGCTTGGAATAAGCATGGTTTAGAGTTTAAGGTGTTAGATTA
ACTTCTATTCTCAAGTAAAAGAGATGAGATGTATAAGCTACCATGCATTTACATGAGAATGTACCAAGCAAGAAGCCCTT
TTAAGTGAGAGAATTGTAGCTTGATTTTTAAGACATCCAAATCACTTGGGTGAGGATCTCCATCCATCTAAGCAATTAAT
AACTTACTTTTATCAATATTTTCTTATTTTATTATAAAAGTAAAAGGTACGAATGTACTTATGTTGTACTTATCTGTCAG
TTATGTGCATTTGTACCTTTATTTGCTACAGTAATTATATAGGCTTTTTATGCTTCTGCTGGCACTT-TTTTTTGAACTT
CGCTTCTGCTGACACTTGAATTCCTCAAATGCAACAGGAGCAACTCCTAAAGGAGTTTTGAGAATTATGGGTACACCAGG
ATTAACAATATACCATGTGAAAAGTCACCTACAGGTACATATTGTTTAACAGTGCCACTTGGCCTTTGGTAATATTTGTT
AACTCTTAATTTCTGATATTGAATTCC-CCATTACTGTTTTCAGAAATACAGGCTAGCAAAGTACATTCCCGACTCTTCA
GCTGATGGTAGGTGAACACACTTCTCATATACTTGGTATTGTGGTATTTGTTTCAGTTCTTTCCTAATATGTATCTCTCG
TGTAGGTAACAAGGCTGATAACAAAGATCCAGGGGATTCACTAGCAGGACTTGATGGATCCTCGTATGTATACACATATA
GCCAGTTATAATCTCCATTAAATAGTAACTTATGTAAACTGTGACTGGCATGGCATGAGATGAAAGTGCTGCAATGTATG
CCGTATTCTACAATGCACTAAGAAATTCATCTAGCATAGTCAACTCTCTTATTTTACTACCCTTGAGGTTTGCATGTCGC
TCGACAAACACATGCTAACTGTGGTTCCTCAGTAATTAGAAACAT-AAAAAATCAGGGTGCAACCATAATCTAAT-GAAA
TCTCTCTTATTTTTATACT-GATGAGTAATTTCTGCAAAATGAGAAGTGTTCAATTTATTTTATTCCCTTCATCAATTTT
TGGCCTTGAATATCATCAGGTACACAAATGCTACGCAGCAATGAAAACACGTTGATATAGCTTCAAACCGATCCATGTGC
ATTTTTATCTTCCTTTATTTGAAAGATGTAATATCGTTGCTTTTTGTTGGTTTATCCATGCTATGCTATCCGTAAGGGGC
AAGTCTTTTGCTAATGTATAGCGACCTTTTTCTTGGAGACCTCAATTTCACTTTTGGAATTAGTGTCTTTCAGTTGATGC
TGCTCCCCTGTTTTCCTCAGTTTTTCCTAGGGACGTTTGATAGTCGAGCCTTTTTCTTTACAGTGGAATGCAGATATCTG
AAGCCCTGAAGCTGCAGATGGAGGTCCAAAAGCGGTTGCATGAACAGCTCGAAGTAAGTTTTT-GTTTGCGATCCAAAAG
CAGTCCAAAAGCAAATGCTTGTAAAATACTTTATCTGCTGTGGTGAATTAAAAAACATGGTGATTTGTCCATTCTAAAAA
CAGAGGAAAATTCTTAGTCAGCTAGAGGCAAAAACAAGTCCGTTCCTAATATTGTCAACTTCCACGCTTCTTCTAGTAAT
GAATGTGAAGTCTGCATTAGAGACATTGTTTGCGTTTCGGTTTGTAATCTCATTCATATTTCCAAACTTGCAAATTAAGT
AAATAGTTAGGTTTAATTGACCAGATGCATTAGTTGCATGCTTGCATAGCGGTAAATGCATCAATAACCTTCAATTATAT
TAAGTAGAGATCAATGATAAGATGTGCTGATAACATTTTCTTTAGGTACAAAGGCAGCTGCAGCTGCGAATCGAGGCACA
GGGAAAGTACCTTAAGAAAATCATAGAAGAGCAGCAGCGTTTCGGTGGCGGTGGTATAAAGTCTGAAACACCTGGTGCAG
GAGCTACTGTCACAGTGTCGAGCGATCAGTTCCCCGATTCTGAGAGGACAGACCCCTCGACTCCTGCACCGACATCTGAA
TCTGCATCTCAAGGTGGGGCTTTCAAAAGAGACAGTGGAAGCCAGACTGAAGCAATCAAGAGCCCATGTCACGATGAACC
GCTGCTAACTGCAGATTCCAACTGTCATCCCGGTTCTCCTACTCTCAGTCCGAAGCATGAGAGGGCAGCAAAGAGACAGC
GAGGTAGCGACGCTGAATTCCCGGAGGCCGAGTTATCCCTTCCGCAGCATATCTTCGAGTCGAGCTCAGGGCCAGAGTTC
CAGCAATGTTCGGTGCCCTACTACTCGGGTCATTAGCCTCCCGGCAGCTACATTTTGGCAGCATCTTAGAATGGTGTCAT
CTAAGGGGATATGTTGTATGTTGACAAAAGTTGTTAGGTGTTTTCAGGTGGTTGTTTACATGATGCATACTTACACATGA
CATCTATATCTTGCATTTGTAGCGCCTTGACTTGTAACCTTATTGGCAGATGAGTTGACCAGTTTGGGTGGGGTGGGCAC
TGTTAGCCTG-TTTTTACATGCTATGTTTTCTACTCTTGTTCTTGAGTCTTAACACCAAGTTTATCTTGCTATGCTA---
---TTTGTTATGAGGGTGATTGATGATCAGAAACAACGCGTTTACCAGTGTTTTCATGTCAGTGCCCCTCTTTTCAGTGT
GTACTTCGTACAAAATATAATTATAAAATAATACCATCAAAAGTCTA-ACAAAATCCTAAGTCAACATCTACAAACGTTT
TTGGAAGAACATCTTTTTTTAGGGGTAAAACTAAGTTTTATTGATCGAAGGCCACAAAATGTGGAATACAAACTTGAAA-
-------------------CTTGCGTACTCCCTCCATTTGGACATATAGGGCCTGATTTGTATTTTGAGATTTACTTTGA
TCGACAATAAAAGTAATACTACATGAGATGTTTGCTATAAAAATATATCATTAGAAACTA--------------------
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>chr5A_1
TTGGAACCTTGGCTAGAGGTTTCTTTGAAAATTTCAGCAGCCCCTTTGGTCCATAACGGGGCGGGACTCATTCTATTATG
ATTCTTTAGATTATTCGCAATTGATGGCCGCTTGGATGACTAGAATGGCTCATTCGAGCCACCACCTCGCCTATTTGTAT
CCGTGCTGTTTTGTCTTGCTTAGTGGCCATGAAATTGACCTGTCTGAGCTGATCCAGGATCGCAAT----AGTATGAGAT
GGTGCACCGTCCCAGCTGTGGGCACAAGTATTCCAGTATCAGTTTGTGTTGCCTCTGTGACTTGTATGATTTGATTGATC
TGCCTTGTAAACAGAACGACCAGTGGAATGATGAGATAAAGGTATTAGCGTGGATGAAAACAGAAAATGGCTGTTCCCTC
TAGCATTCTGGGCAGAATATGAGAATTTTAGCTGTTTGCTATGGCAAAC-GACATCTCTGTAGGCTGTTAGTGCTCTCAG
TATTATCTAGTAC-------------------------------------------------------------------
-------------TGTACTAAATTAAATTAAACACTCCCCGTTGTCTTAAATCCAATGTGTGGTTAGTCTTCCCTGAAGT
ACCCGGGTTCTGTATGAAAATTGCCATATCTTACTGCTTTTTGTTTGAGGTGTCTTAATAGGGCATTAACTACCTAGCAA
ATCATCATACATGTTGCAAGCTGGTGGTCTTTCTCAGTAGATAGGGAGTGAAATATGTCACGGCACCT-------TCATA
TTAAGTAGTTATATTTTGTACTTTCATTAATGCAAATTGTTGGTGATCACTGCATGTCAGACTCCCCCTTCTATTAAAAT
AGCATGGTTCTC-TAAGGAAATAAAATAGCTTTTTCTATTTGGTTCCTTACATCATTTTTTCCCTAGATGATGAACAGTA
TATCCACCAGCACTAGAGTCTAATCGTAGCAACTCAGTCGCTCACCTGCAGCAAATGGAATCAGGTGAAAACAACATGGG
CTCGAATGATGGACCAAACAGCAAAGCTAGCTTGGCTGCGAGGCAACGCTTACGGTGGACAGATGAGTTGCATGAACAAT
TTGTGGAGGCTGTTACTCAACTTGGCGGTCCTGATAGTACGTATCCACACTGCAACTGTGCTTCATTACTTCTTTATATG
AATACTATTTCTTCTT-ACTGTGTAATCACTTTATGGGACTAGATAATGTAGTTTATTTGAAATCTAAAGGTGATATAAT
TTTACATTAATTCATTTATATTACATGACATTGTTATATCTAGTGAAG-TTTTTAGTATAGTTTGAAAATACCAGACATT
CTTAAAAGTGACAATAGCATGTATATATATGATGCCGTGGAACTCAAAACATTG-TTCTAAGTAGAAAGCTTATATATGG
TTTTAAGCTGTCACATTATCTCAATACAACATCATATAAGCTTGGAATAAGTGAGAGAAT--------------------
-----------------------------------------------------------TGTACCAAGCAAGAAGCCCTT
TTAAGTGAGAGAATTGTAGCTTGATTTTTAAGACTTCCAAATCACTTGGGTGAGGATCTCCATCCATCTAAGCAATTAAT
AACTT----TTATCAGTATTTTCTTATG---TTATAAAAGTGAAACGTAAGAATGTACTTAGGTTGTACTTATCTGTCTG
TTATGTGCATTCGCACCTTTATTTGCTACAGTAATTATATAGGCTTATTATGCTTCTGCTGGCACTTTTTTTTTGAACTT
TGCTTCTGCTGACACTTGAATTCCTCAAATGCAACAGGAGCAACTCCTAAAGGAGTTTTGAGAATTATGGGTACACCAGG
ATTAACAATATACCATGTGAAAAGTCACTTGCAGGTACATCTTGTTTAACAGTGCCACTTGGCCTTTGGCAATATA--TT
AACTCTTAATTTCTGATATTGAATTCCTCTATTACTGTTTTCAGAAATACAGGCTAGCAAAGTACATTCCTGACTCTTCA
GCTGATGGTAGGTGAACACACTTCTCATATACTTGGTATTGTGATGTTTTTTTCAGTTCTTTCCTAATATGTATCTCTCG
TGTAGGTAACAAGGCTGATAACAAAGATCCAGGGGATTCGCTAGCAGGACTTGATGGATCCTCGTATGTATA-----ATG
ACCAGTTATAATCTCCATTAAACAGTAACTTATGTAAACTGTGACTGGCATGGCATGAGATGCAAGTACTGCAATGTATG
CCGTATTCTACAATGCACTAAGAAATTCATCTAGCATAGTCAACTCACTTATTTTACCACTCTTTA-GTTTGCATGCTGC
TCGACAAACACATGCTAACTGTGGTTCCTCAGTAATTAGAAACATGAAAAAATTAGGGTGCAACCATAATCTAATTGAAA
TCTCTTA---TTTTATACT-GATGAGTAATTTCTGCAAAATG-GAAGTGTTCAATTTATTTTATTCCGTTCATCAATTTT
TGGCCTTGAATACCCTCAGGTACACAAATACTGCGCAGCAACGAAAACACGTTGATATAGCTTCAAACTGATCCATATGC
ATTTTTATCTTCCTTTATTTGAAAGATGTAATTTCGTTGCTTTTTGTTGGTTTATCCATGCTATGCTATCCGTAAGGGGC
AAGTCTTTTGCTAATGTATAGCGACCTTTTTCTTGGAGACTTCAATTTCACTTTTGGAATTAGTGTCTTTCAGTTGATGC
TGCTCCCCTGTTTTCCTCAGTTTTCCCTAGGGACGTTTGATCGTCGAGCCTTTTTCTTTACAGTGGAATGCAGATATCTG
AAGCCCTGAAGCTGCAGATGGAGGTCCAAAAGCGGTTGCATGAACAGCTTGAAGTAAGTTTTTTGTTTGCGTTCCAAAAG
CAGTCCAAACGCAAATGCTTGTAAAATACTTTATTTGCTGTGGTGAATTAAAAAACATGGG--TTTTTCCATTCTAAAAA
CAGAGGAAATTTTTTAGTCAGCTAGAGGCAAAAACAAGTCCGTTCCTAATATTGTCAACTTCCACGCTTCTTCTAGTAAT
GGCTGCGAAGTCTGCATTAGAGACATTGTTTGCGTTTCGGTTTGTAATCTCATTCATATTTCCGAACTTGCAAATTAAGT
AAATAGTTAGGTTTAATTGACCAGATGCATTAGTTGCATGCTTGCATAGCGGTAAGTTCATCAATAACCTACAATTATAT
TAAGTAGAGATCAATGATAAGATGTGCTGATAACATTTTCTTTAGGTACAAAGGCAGCTGCAGCTGCGAATCGAGGCACA
GGGAAAGTACCTTAAGAAAATCATAGAAGAGCAGCAGCGTTTCGGTGGCGGTGGTATAAAGTCTGAAACACCTGGTGCAG
GAGCTACTGTCACAGCGTCGAGCGATCAGTTCCCCGACTCTGAGAGGACAGACCCCTCAACTCCTGCACCCACATCTGAA
TCTGCATCTCAAGGTGCAGCTTTCAAAAGAGACAGTGGAAGCCAGACTGAAGCAATCAAGAGCCCATGTCACGATGAACC
GCTGCTAACAGCAGATTCCAACTGTCATCCCGGTTCTCCTACTCTCAGTCCGAAGCACGAGAGGGCAGCAAAGAGGCAGC
GAGGCAGCGAGGCTGAATTCCCGGAGGCCGAGTTATCCCTTCCGCAGCATATCTTCGAGTCGAGCTCGGGGCCGGAGTTC
CAGCAATGTGCGGTGCCCTACTACTCGGGTCATTAGCCTCCCGGCAGCTACATTTTGGCAGCATCTTAGAATGGTGTCAT
CTAAGGGGATATGTTGTATGTTGACAAAAGTTGTTAGGTGTTTTCAGGTGGTTGTTTACATGATGCATACTTACACATGA
CATCTATATCTTGCATTTGTAGCGCCTTGACTTGTAACCTTATTGGCAGATGAGTTGACCAGTTTGGGTGGGGTGGGCAC
TGTTAGCCTGTTTTTTACATGCTATGTTTTCTACTCTTGTTCTTGAGTCTTAACACCAAGTTTATCTTGCTATGCAA---
---TTTGTTATGAGGATGATTGATGGTCAGAAATAAGACGATTAGCAGTGTTTTCATGTCAATG-CCCCCTTTTAAGTGT
GTACTTCGCACAAAATATAATAAAAAAATTATACCATCAAAAGTCTAGGCAAAATCCCAAGTAAACATCTACAAACTTTT
TTGAAAGAACATC-----------------------------------------------------TACTAACTTGAAA-
-------------------CTTGTGTGCTCCTTCCATTCGGACATATAGGGCCTAATTTGCATTTTGAGATTTGCTTTGA
TCGTCAATAAAAGTAATACTATATGAGATGTTTGCTATAAAAATATATCACTAGAAACTA--------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>SNPs
----------S----S------------------------------------------S-------S-------------
----------------S-------------S-------------------------------------------------
-----------------------------S--------------------------------------------------
--------S------------------S-----------------------------------S----------------
--------------------------------------------------------------------------------
-----S------------------S-----S--------S----------------------------------------
---------S-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS--------------------------S----------------------------------------
-------------------------------S----------S-------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S-----S---S---------S--
-----S------S-----------------S-------------------------------------------------
-------------------------S----S-------------------------------------------------
----------------------------------S----------------S----------------------------
----------------------S--------------------S-----S------------------------------
----------------S-------------------------S----S--------------------------------
------------S-------------------------------------------------------------------
----------------------------------------------------S---------------------------
---------S---------------S------------------------------S-----------------------
--------------------------------------------------------------------------------
------------------------------------S-------------------------------------------
--------------------------------------------------S---------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
------------------------S-------------------------------------------------------
---------------------------------S----------------------------------------------
-------------------S-----------------------S------------------------------------
--------------------------------------------------------------------------------
-----S-------------------------------------------S------------------------------
------------------S-------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------S-------------------------------------------------------------
----------------S---------------S----------------------------S------------------
--------------------------------------------------S-----------------------------
-------S------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------------------------------------------------------------------
-----------------------------------------------------------------------S--------
---------------------------------------------------S----------------------------
----------S---------------------------------------------------------------------
------------------------------------------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------S-----------------
---------------------------------------------------------------------S-------SSS
SSS------------------------------------------------------------------S--S-------
-------------S------------------------------------------------------------------
------------S---------S--------------------------S-----------------------------S
SSSSSSSSSSSSSSSSSSS-------------------------------------------------------------
------------------------------------------------------------SSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
>forward_59
---------------------------------------GCCCCTTTGGTCCATAACGT---------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_1143
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------GGGCGGTCCTGATAGTACGT--------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_406
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------ATGGCTGTTCCCTC
TAGCAC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1747
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------CACTTATCTGTCAG
TTATGTGCAT----------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_504
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----ATCTACTCCCTCCGTCCCAT--------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_2345
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------GTTCATCTAGCATAGTCAACTCTCT-------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_509
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------ACTCCCTCCGTCCCATAATGT---------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2500
--------------------------------------------------------------------------------
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-------------------GGATGAGTAATTTCTGCAAAATGAAA-----------------------------------
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-----------------------------------------------------------------------------
>forward_1413
--------------------------------------------------------------------------------
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--------------------------------TGCCGTGGAACTCAAAACATC---------------------------
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>reverse_3445
--------------------------------------------------------------------------------
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----AACTGTCACAGTGTCGAGCG--------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>forward_3137
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------AAT
GGCTGCGAAGTCTGCAC---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------
>reverse_4761
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------------------CGGGAGCAAAAGGACAAACG-----------------
