>input_sequence_28699
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-------------------------------------------ATGGAGGTGTCCGCCGACGCGGCGGCGGCGGCGGCGG
CGCGGACGCTGCGGTGGGCCGGCCGTGCGGGGCACCTGCGCGGCGTCCCGCGCGCCGCGGTGATCGGCGCCGTTGGCACC
ATCGCCAAGGCGTACGTGTCGCTGCTCAACACGACCACCGTGCACAACGCCGACGCCCTCCACCGCCTCGTCTCCTCGCG
GCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCATATGTCCACGTATGTTCTCCCACTCCCCCGTCGTATCCCTCCCG
GATCTCCCCCGTGTACCGCTCTTGGTGTTTGTGGCTTCTGAATTCTGACCAGATGTAGGAGGAGAGACCTGGTGGCGATG
TGTTCGATCTGTCGTGGCTCTGGCACCAATGTTGCAAGAATTGTGCGAATTCGTTGTTGGAAACCAGAAAATTGTATTAT
GTGTTGATAAAATTTACTCTGGGTAGGATTGATGCTGCGCATCTGAAACTGCACGTGTTCGTTGAGATTTACAGCATGTA
GTTGATGCTG------TGCTGTCATTAGCATACTGGAAGGTGATTTCCATACTGTGTAGAATGCAGTTCGGACACGCCTT
GTGCTCATGTTGATGTAGGATTTTCATTTTGAAGTGCTGAAATT-TTTGTTAGACACT-TCCTTAGCGCGGATAACTTGA
GAAATATGCATATTGCTCTTTTCCTATCCTTTCAT--GCAACATCATGCTGTAGATTGGTGTCCATGTTTAAGAAAAGTA
TAATTTTTCATTTGTCGTACATTGTCTATGCATTGCATTGGCATGTTGCTGCATTGTGCAGGTTTCATGTATAGGTTCCA
GTGATATATAGTTAGAATTAGTTAGGCATGTTTTGTTTGCTGTATTCAGTTCTCGTGTATCGGAAGTTTTTGTAACCTTG
AGGTTGTTATCCTGTACTTGTTTGTACAGGATAGATGACCCGTTTATGTGGGGATTCAAAGGTTTCCCTATTACAGATTC
AAAGCTTGCAAGATGGGTGCTGACAGCAGAGGACATCTGCTTCAGGAATGTATTCATGTCTTACATGTTTCGACTTGGTA
AGGCTCCTTGTCGTCTTCGTTATTTACGTTTTTTCTT-TGCACCGGTTTGTATAGTCAAGTAATAATCAGTATGGTAGTA
TTACTGTGACATACGAATCATGTAGGCATAGTGAGCTTCACGAAACCCCA----------CCCTCATTTGCTGTACTAAC
TAATGTTGTGGAGCACCTCCAGCATAGGTCAA-------ATGAAATGTTGCCTTAGTGGAGCCATTTTGTGGCATATTTT
TGTTAAGCATGCAATAACCCCATTTAATCCAGTGGCTTCAGGTATGCGTTTGCATTTTAAACACCGACAACCTTCATAGT
TCTAACAGGCTTCATATATTTCTGTTACCTAAGCGTCCATGGTTGATTGCACTCA--------CTACCAAGACTAGCTTT
AGAAAGTTAATTAAAAACTTCTCAAACGTGTCCCAAGTGTTGTGTATGTTATTCCTCCCTGTTGGACCATGTTAATGGTG
GGCATAATTGTCCTATATTTCAAGTTTGCCAAAAAGTTGATTTTTGTGCTTGAATTGCATCTCTTTTCCAGCCTCCATAT
CGAAGTGATACGGTCTGATACTTGCCATGAC---TGTTGTGGTGGTAATACATAAAGAATGATATGATATCTAAGACCTA
TGTTATCTCTAGTTCAATTGGTACTTTAGATGTTCAACACTTGTGTA--TTTGTCATCTTTATTTTTGTATTTTTCTTAT
CTTTTCA-TTTCAGGGTTTCATTGCAAGGCAGAGTTGGTATCACTCTGCATCACATAATTTGACAATCTTGTTATTGGCA
TGTAATTGTATGCACAGGGAAATGTGTGCCGATCACTAGAGGGGCTGGAATTTATCAAGACCATATGAATGAGGCCCTTG
AAGTGCTTAGCACTGGGGGCTGGGTATGTACATTTTC-----TTCGGCATTAACTATTCCATCATTAACATATGTTGTGC
TTATGTTTATAAATTCTGGTCCTTATTTGATTG--AATTTCGTCATGCCATATTCAAACAGTTGCATTCATTCCCTGAAG
GAAAAGTAGCCCAAGATCACCAACCAATCAGACGGTTGAAATGGGGAACTGCCAGTCTTATTGTCCGAGCACCTGTAACT
CCAATAGTTTTACCTATTGTTCACACTGGTTTTGAAAAGGTATATTGTAATCTTTGAATCTCTGAGATGCCATCATTTTG
TGTATATATTCCTGTGTTGTAGATGGGCATTTCAAATATAATTCCATATATATAGTACTCTGCTGAAATCTGAA-TATAT
TGCACAGAGTTTTGTCTGTCTCTATA-CAGTAAACCACTTGACTCACAGCACTATTTCATTTGTATTCCCTTTAATTAAA
CCCAGATCTCTTTTATGTTATAT----GGTACTCTGAACTTCTCCCCATTGTACT-TAGGTCATGCCAGAGAAATCATTT
TTTGGACGCCGTCCACCATTGCCTCTCTGCGGCAAGGATATACAGATTATCGTGGGAGAACCAGTAGATTTTGATCTGGC
AGGCTTAAAGCAGGTGGCAGCAATGATACCCCAAGACACATCCTTCGAAAGAAAGGGCTGGCCAACCATCACGCCGGAGG
GGCTAGACGAGGCAGCGCAGAGATGGCTTTACCAGAAGATGTCGGATAAGATCCAGTCCGCGATGGAGAGCTTGAGGAAG
ACGCTTCTGAACTCGAAGCAGCATTGA-----------------------------------------------------
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------------------------------------------------------------------------------
>chr2A_1_TraesCS2A01G487000
CACGACGAGTACGACTCCATCAACCCCGTTCACTTGAACGCTTCCGCTTAGCGATCTACAAGGGTATGTAGATGCACTCC
CCTTTCTACTCGTTGCTGGTCTCTCCATAGATAGATCTTGGTGTTTCGTAGGAAAATTTTTGAATTTCTGCTACGTTCCC
CAACACCGTTTTGAATTACCGTAACATTTACATCTTTTTTGAAATTGTGAATATAACTAATATATGTGTGCTTTAAAAAA
ATCATGTGATAAACTTCTCACATAAAAAGAAATGGTAAAAGGCAAAGGAAAAACATAATGTATCAGATGGATTTTTAAGA
CATTCGTGAGATAACCACAATAAATCTTGCGTTGATAATCCATTTTTAAGACTTTCGTGAGATAACCACAACAAAGGAGG
GATTATATTTCAACATCGGCGTGTCTATCCTTGTTGCCGTTAGATGGCATAGTTCGGATGTTTGCCGTGTCGCATTGATG
GACATGTTAATTACTGCTCCTGTTGCAACACACAAGTGTATGTGCTAGTATAACTAATATATTTATGTGCTAGTGGAAGT
CCGGCAGTAGTTGTTGTTCTTGTGGTGATCGGCATTTGTTGTGACACGGCTGGATGATTGATTTAGGGCAGACCCTTTTG
CGTTGTGTTTGTAATTGTTGTGGTGGCTAATGTGTTGATTAGCTAGGATATGGTGTTCTTACTAATTGTTGTTCGCAACA
AGTTGTAGTGTCTTGTATTTTAAATTTTGCATTTCATAAAAATACCGTATGCTCTTAAGAAAAACAGTGGCTTTAAAAAA
ATCATGTGATGGACTTCTCCTAAAAAGAAATGGTAAAAGGCAAAGAAAAACATAATGTGTCACCAGCCGTTGCAAGTCAA
TGAGTCATAGTCCGGGCCTAACTCATCATCACAAGAAAAGAAAAAAACCAACTAAAGAAAAG---GTCATAGACCAGGCC
CACCAAAACGGAAAGAACACCTCGAGAAGAAAGAGGGTAAAAGATGGAGGTGTCCGCCGACGCGGCGGCGGCGGCGGCGG
CGCGGACGCTGCGGTGGGCCGGCCGTGCGGGGCACCTGCGCGGCGTCCCGCGCGCCGCGGTGATCGGCGCCGTTGGCACC
ATCGCCAAGGCGTACGTGTCGCTGCTCAACACGACCACCGTGCACAACGCCGACGCCCTCCACCGCCTCGTCTCCTCGCG
GCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCATATGTCCACGTATGTTCTCCCACTCCCCCGTCGTATCCCTCCCG
GATCTCCCCCGTGTACCGCTCTTGGTGTTTGTGGCTTCTGAATTCTGACCAGATGTAGGAGGAGAGACCTGGTGGCGATG
TGTTCGATCTGTCGTGGCTCTGGCACCAATGTTGCAAGAATTGTGCGAATTCGTTGTTGGAAACCAGAAAATTGTATTAT
GTGTTGATAAAATTTACTCTGGGTAGGATTGATGCTGCGCATCTGAAACTGCACGTGTTCGTTGAGATTTACAGCATGTA
GTTGATGCTG------TGCTGTCATTAGCATACTGGAAGGTGATTTCCATACTGTGTAGAATGCAGTTCGGACACGCCTT
GTGCTCATGTTGATGTAGGATTTTCATTTTGAAGTGCTGAAATT-TTTGTTAGACACT-TCCTTAGCGCGGATAACTTGA
GAAATATGCATATTGCTCTTTTCCTATCCTTTCAT--GCAACATCATGCTGTAGATTGGTGTCCATGTTTAAGAAAAGTA
TAATTTTTCATTTGTCGTACATTGTCTATGCATTGCATTGGCATGTTGCTGCATTGTGCAGGTTTCATGTATAGGTTCCA
GTGATATATAGTTAGAATTAGTTAGGCATGTTTTGTTTGCTGTATTCAGTTCTCGTGTATCGGAAGTTTTTGTAACCTTG
AGGTTGTTATCCTGTACTTGTTTGTACAGGATAGATGACCCGTTTATGTGGGGATTCAAAGGTTTCCCTATTACAGATTC
AAAGCTTGCAAGATGGGTGCTGACAGCAGAGGACATCTGCTTCAGGAATGTATTCATGTCTTACATGTTTCGACTTGGTA
AGGCTCCTTGTCGTCTTCGTTATTTACGTTTTTTCTT-TGCACCGGTTTGTATAGTCAAGTAATAATCAGTATGGTAGTA
TTACTGTGACATACGAATCATGTAGGCATAGTGAGCTTCACGAAACCCCA----------CCCTCATTTGCTGTACTAAC
TAATGTTGTGGAGCACCTCCAGCATAGGTCAA-------ATGAAATGTTGCCTTAGTGGAGCCATTTTGTGGCATATTTT
TGTTAAGCATGCAATAACCCCATTTAATCCAGTGGCTTCAGGTATGCGTTTGCATTTTAAACACCGACAACCTTCATAGT
TCTAACAGGCTTCATATATTTCTGTTACCTAAGCGTCCATGGTTGATTGCACTCA--------CTACCAAGACTAGCTTT
AGAAAGTTAATTAAAAACTTCTCAAACGTGTCCCAAGTGTTGTGTATGTTATTCCTCCCTGTTGGACCATGTTAATGGTG
GGCATAATTGTCCTATATTTCAAGTTTGCCAAAAAGTTGATTTTTGTGCTTGAATTGCATCTCTTTTCCAGCCTCCATAT
CGAAGTGATACGGTCTGATACTTGCCATGAC---TGTTGTGGTGGTAATACATAAAGAATGATATGATATCTAAGACCTA
TGTTATCTCTAGTTCAATTGGTACTTTAGATGTTCAACACTTGTGTA--TTTGTCATCTTTATTTTTGTATTTTTCTTAT
CTTTTCA-TTTCAGGGTTTCATTGCAAGGCAGAGTTGGTATCACTCTGCATCACATAATTTGACAATCTTGTTATTGGCA
TGTAATTGTATGCACAGGGAAATGTGTGCCGATCACTAGAGGGGCTGGAATTTATCAAGACCATATGAATGAGGCCCTTG
AAGTGCTTAGCACTGGGGGCTGGGTATGTACATTTTC-----TTCGGCATTAACTATTCCATCATTAACATATGTTGTGC
TTATGTTTATAAATTCTGGTCCTTATTTGATTG--AATTTCGTCATGCCATATTCAAACAGTTGCATTCATTCCCTGAAG
GAAAAGTAGCCCAAGATCACCAACCAATCAGACGGTTGAAATGGGGAACTGCCAGTCTTATTGTCCGAGCACCTGTAACT
CCAATAGTTTTACCTATTGTTCACACTGGTTTTGAAAAGGTATATTGTAATCTTTGAATCTCTGAGATGCCATCATTTTG
TGTATATATTCCTGTGTTGTAGATGGGCATTTCAAATATAATTCCATATATATAGTACTCTGCTGAAATCTGAA-TATAT
TGCACAGAGTTTTGTCTGTCTCTATA-CAGTAAACCACTTGACTCACAGCACTATTTCATTTGTATTCCCTTTAATTAAA
CCCAGATCTCTTTTATGTTATAT----GGTACTCTGAACTTCTCCCCATTGTACT-TAGGTCATGCCAGAGAAATCATTT
TTTGGACGCCGTCCACCATTGCCTCTCTGCGGCAAGGATATACAGATTATCGTGGGAGAACCAGTAGATTTTGATCTGGC
AGGCTTAAAGCAGGTGGCAGCAATGATACCCCAAGACACATCCTTCGAAAGAAAGGGCTGGCCAACCATCACGCCGGAGG
GGCTAGACGAGGCAGCGCAGAGATGGCTTTACCAGAAGATGTCGGATAAGATCCAGTCCGCGATGGAGAGCTTGAGGAAG
ACGCTTCTGAACTCGAAGCAGCATTGACATTGATTCTCTTTGTTCGTTCTTCTACCATGGTGCAACGATGCACTGTCTTT
TTTCTCCAATACCTTGTTGAATTGGTTAGGTTG--TAGTAGCTTTGTTAGCTAGTTTCAGATGATGGGATCACGATACGG
TGATTGGGAGGATACAGGAATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNGGTGCAGAATTAGAGTTCAGAGTGTCAGATTTGGAGTTTTTCTTTTTTTGCAATAA
CAAGAGTATTCAGGGCTGTTGCCTAATTGCATGGCTGTTTGGATCGGATTGCCATTTTGTTAAGCCAAGGAACTGCCCGT
AGAGGTTTTTCACCATCCAGTGAATGTTATC-----TATGTCTGAAGCCTAAATCTCCCTCGACGTTTTCTGAACCTGGA
GATGGTTTCTCCTTT---TATACCTTTACTCATGTGAAAGACATAGTTGGTGTTGGTGATTATCAATCTGCCTACCTATA
TATACCAATTAATTATGATGTTGG-GGTACGTAGCTTTGCTTCGAAGGCCCAGAAGGGACCGATTTATTAGCTACGGGTG
GATCCAATTTTAGATCTTGGCCATCATTCGCCTCCAAGGTGAACCATTATGTGTCCAAACCTTGTAGCGAAAGTGTTC
>chr2B_823
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----------------------AAAAGAAATGGTAAAAGGC---GAAAAACAGAATGTATCACCAGCCATTGCAAGTCAA
TGAGTCATAGTCCGGGCCTAACTCATCATCAAAAGAAAATAAAAACCCAACTAAA--AAAAG---GTCATAGATCAGGCC
CACCAAAACGGAAAGAACACCGCGACAAGAAA-GGGGTAAAAGATGGAGGTGTCCGCCGACGCGGCGACGGCGGCGGCGG
CGCGGACGCTGCGGTGGGCCGGCCGTGCGGGGCACCTTGGCGGCGTCCCCCGCGCGGCGGTGATAGGCGCCGTGGGCACC
ATTGCTAAGGCGTACGTGTCGCTGCTCAACACCACCACCGTGCACAACGCCGACGCCCTCCACCGCCTCGTCTCCTCGCG
GCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCATATGTCCACGTATGTTCCCCCACTCCCCCGTCGTATCCCTCCCG
GATCTTCCCCGAGTACCGCTCTTGCTGTTTGTGGCTTTTGGATTCTGACCAGATGTAAGAGGACAGACCTGATGGCGATG
TGTTCGATCTGTCGTGGCTCTGGCACCAATGTCGCAAGAATTGTGCGAAATTGTTGCTGGAAGCCAGCAAGTTGCATCCT
GCCCTGCTAACATTA----------------------------------------------TTGGGATTTAGAGCATGTA
GTT-ATACCTATGTATTGCTGTCATTAGCATACTGAAAGAGG--------------------------------------
-------------------------ACTTTGAAGTGTTGAAATCCTTTTTTAGGCACG-TTTTTAGCATGGATCATTTGA
GAAGTGTGCATCTTGCTCTTTTCTTATCCATTCATATGCAACATCATGTTGTAGATCGCTGTTCTTGTTTAAGGAAAGTA
TAACTTGTCATTTGCCATACAATGTGTATGCATTGTATTTGCCTGCTGTTGTATTGTACAGGTGTCATGTATAGGTTCCA
GTGTGGACAATTACAAATTAGTTAGGCATGTATTGTTTGCTGTACACAATTCTTGTCTGTTGGAAGTTTTGGTAACCTTG
AG---GTTATCCTATACTTATTTGTACAGGATAGATGACCCATTTATGTGGGGATTCAAGGGTTTCCCTATTACAGATTC
AAAGCTTGCAAGATGGGTGCTGACAGCAGAGGATATCTGCTTCAGGAATGTATTCATGTCTTACATGTTTCGACTTGGTG
AGGCTCCTTATCGTGTTTGTTATTTACTTTTCTTTTT-TGCACAGGTATGTATGGTCAAATGATAATCAGTATGT---TA
TTACTGTGGCACATTAATCATGTAGGCATAGTGAGCTTCCCCAAACCCCA----------CTCTCACTTGCTG---TAAC
TAATGTTGTGGAGCACCGCCACTGTAGGTCAATTCAGATATGAAATGTTTCCTTAGTGGAGCTAGTTAATGGCATCATTT
TGTTAATCATGTAATAACCCCATTTAATCCAGTGACTTTGTGCATGCTTTTGCATTTTAAATGCAGACAACCTTCGTAGT
TCTAACAAGCTTCGTATATTTTTGTTACCTAAGCAATCATGGTTTATTGCTCTAAGCCTCTAACTACCAAGACAAGCTTC
AGAAA---------------GTCAAACCTGTCCAAGCATTC-TGTATGTTATTTCTCTCTGCTGAACCATGTTAATGGTG
TGCATAATTGTTCTGTAATTCAAATTTGCCATAAAGTTGACATTTACCGTT-----------------CAGTCTCCATAT
GAAAATGATAC----------TTGACATGCTATGTGTTGTGGTGGTAATACATAAATGATGATATGCTATCTAACAGCTA
TGTTATGTCTAGTTCAACTGCTACTTTTGATGTTCAGCACTTGTGTGTTTTTGTCATCTTTATTCTGGTATTTTTCTTAT
CTTTTCATTTTCAGGGTTTCATTGCAAGGCAGAGTTGGTATCACTCTGCATCACATAATTTGACAATCTTGTTATTGGCA
TATAATTGTATGCACAGGGAAATGTGTGCCGATCACTAGAGGGGCTGGAATTTATCAAGACCATATGAATGAGGCCCTTG
AAGTGCTTAGCACTGGAGGCTGGGTATGTACATTTCTTT-GGTTCAGCATTAACTATTCCATCATTATCATATGTTGTGC
TTATGTTTCTAAATTCTGGTCCTTATTTGATTGTAAATTTCGTCATGCCATATTCAAACAGTTGCATTCATTCCCTGAAG
GAAAAGTAGCCCAGGATCACCAACCAATCAGACGGTTGAAATGGGGAACTGCCAGTCTTATTGTCGGAGCACCCGTAACT
CCAATAATTTTACCTATTGTTCACACTGGTTTTGAAAAGGTATATTGTAATCTTTGAATCCCTGAGATGCCATCATTTTG
TGTATATATTC-TGTGTTGTAGATGGGCATTTCAAATATAATTCCATATATATAGTACTCTGCTGAAATCTGAA-TATAT
TGCACACAGTTTTATCTGTCTCATATTCAGTAAACCACTTGACTCAGAGCACTATTTCATTTGTATTCCCTTTAATAAAC
CCAA-ATCTCGTTTATGTTATAT----GGTACTCTGAACTTCTCCCGATTGTACTTTAGGTCATGCCAGAGAAATCATTT
TTTGGACGCCGTCCACCATTACCTCTCTGCGGCAAGGAGATACAGATCATCGTGGGAGAACCAGTAGATTTTGATCTGCC
AGGCTTAAAGCAGGTGGCAGCAATGATACCACAAGACACATCCTTCGAAAGGAAGGGCTGGCCAACCATCACGCCGGAGG
GGCTAGACGAGGCAGCACAGAGATGGCTTTACCAGAAGATGTCGGATAAGATCCAGTCCGTGATGGAGAGCTTGAGGAAG
ACGCTTCTGAACTCGAAGCAGCATTGACATTGATTCTTTTTGTTCGTTCTTCGACCATGGGGCAAGGATGTACTGCCTTT
TTTCCCCAATACCTTGTTGAATTGGTTAGGGTATATAGTAGTTTTCTTAGCTAGTTTCAGATGATGGGATCACAATACGG
TGATTGGGAGGATACGGGAAT-----------------------------------------------------------
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>chr2D_908
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---------------------------ATCAAAAGAAAAGAAAACCCCGACTCAA--AAAGAAAAGTTATAGACCAGGCC
CACCAAAACGGGAAGAACTCCTCGACAAGAAAGGGGGTAAAAGATGGAGGTGTCCGCCGACGCGGCGGCGGCGGCGGCGG
CGCGGACGCTGCGGTGGGCCGGCCGTGCGGGGCACCTCGGCGGCGTCCCCCGCGCCGCAGTGATCGGCGCCGTGGGCACC
ATCGCCAAGGCGTACGTGTCGCTGCTCAACACCACCACCGTGCACAACGCCGACGCCCTCCACCGCCTCGTCTCCTCGCG
GCCCCCCGGCACGCCGCTCCTCACCGTCAGCAACCATATGTCCACGTATGTTCCCCCACTCCCCCGAAATATCCCTCCCG
GATCTCCCCCGTGTACCGCTCTTGCTGTTTGTGGCTTCTGAGTTCTGACTAGATGTAGGAGGAGAGATCGGGCGGCGATG
TGTTTGATCTGTCGTGGCTCTGCCACCATTGTCGCGAGAATTGTGCCAAATTGTTGCTGGAAGCCAGCAAGTTGCATC--
GTCTTGATAACATTTACTC----TAGGATTGATGCTACGCATCTGAAAGGGCATGTGCTCTTTGGGATTTACAGCACATA
GTCAATACCTATGTATTGCTGTCATTAGCATACTGGAAGGGG--------------------------------------
-------------------------ACTCTGAAGTGTTGAAATTCCTTTTTAGACACGTTTTTTAGCATGGATCACTTGA
GAAGTGTGCATCCTGCTCTTTTCTCATCCTTTCATATGCTACATCATGCTGTAGATTGGTGTTCATGTTTAAGGAAAGC-
---------------------------ATGCATTGTATTGGCT---TGTTGTATAGTACAGGTGTCATGTATAGGTTCCA
GTGTGGACAATTACAAATTAGTTAGGCA----------GCTGTACACAATTCTTGTGTGCCGGAAGTTTTGGTAACCTTG
AG---GTTATCGTATACTTGTTTGTACAGGATAGATGACCCGTTTATGTGGGGATTCAAGGGTTTCCCTATAACAGATTC
AAAGCTTGCAAGATGGGTGCTGACAGCAGAGGATATCTGTTTCAGGAATGTATTCATGTCTTACATGTTTCGACTTGGTG
AGGCTCCTTGTCGTGTTTGTTATTTACGTTTTCTTTTCTGCACAGGTATGTATGGTCAAATGATAATCAGTATGT---TG
TTACTGTGGCATATTAATCATGTAGGCATAGTGAGCTTCCCAAAGCCCCACTGGCCCACTCTCTCACTTACTG---TAAC
TAATGTTGTGGAGCACCTCCAGCATAGGTCAATTCAGATATGAAATGTTCACTTAGTGGAGCCAGTTAATGGCATCTTTC
TGTTGAGCATGTAATAACCTCATTTAATCCAGTAACTTTGTGCATGTTTTTGCATTTTAAATGCCGACGGCCTTCGTAGT
TCTAACAAGCTTCTAAAAAATTGGTTACCTAAGCAATCATGGTTTATTGCTCTAA--------CTACCAAGACTAGCTTC
AGAGAGTTAAATAAAAACTTGTCAAACCTGTCCAAGCATTC-TGTATGTTATATCTCTTTGTTGGACCATGTAAATGGTG
TGCATAATTGTTCTGTAATTCAAATTTGCCATAAAGTTGACATCTACCGTT-AATTGTCTCTCTTTTCCAGTCTCCATAT
GAAAATGATACGATCTGATACTTGACATGCTATGTGTTGTGGTGGTAATACATAAATGATGATATGCTATCTAACAGCTA
TGTTATCTCTAGTTCAGTTGCTACTTTTGATGTTCAGCACTTGTGTGTTTTTGTCATCTTTATTCTTGTATTTTTCTTAT
CTTTTCA-TTTCAGGGTTTCATTGCAAGGCAGAGTTGGTATCACTCTGCATGGCATAATTTGATAATATTGTTATTGGCA
TATAATTTTATGCACAGGGAAATGTGTGCCGATCACTAGAGGGGCTGGAATTTATCAAGACCATATGAATGAGGCCCTTG
AAGTGCTTAGCACTGGAGGTTGGGTATGTGCATTTTCTTCGGTTCAGCATTAACTATTACATCATTAACATATGTTGTGC
TTATGGTTATAAATTCTGGTCCTTATTTGGTTGTAAATTTCTTCATGGCATATTCAAACAGTTGCATTCATTCCCTGAAG
GAAAAGTAGCCCAAGATCACCAACCAATCAGACGGTTGAAATGGGGAACTGCCAGTCTTATTGTCCGAGCACCTGTAACT
CCAATAGTATTGCCTATTGTTCACACTGGTTTTGAAAAGGTATATGGAAATATTTGTATCTCTGTAATGCCATCATTTTG
TGCATGGTTTCATGTGTTGAATATGGGC--TTCAAATAGAATGGCATATATATAGTTCTCTTCTGCAATTTGAATTATAT
TGCACG-------------------TTCAGTAAACCACTTGTCTCC-AGCACTAGTTCATTTGTATTCCCTTTCATTAAT
CCAAGATCTCTTTTATGTTATATATATGGTACTCTGAACTTCTCCTGATTGTACTTTAGGTCATGCCAGAGAAATCATTT
TTTGGACGCCGTCCACCATTACCTCTCTGCGGCAAGGAGATAAAGATCATCGTGGGAGAACCAGTAGATTTTGATCTGCC
AGGCTTAAAGCAGGTGGCAGCAATGATACCACAAGACACATCCTTCGAAAGGAAGGGCTGGCCAACCATCACGCCGGAGG
GGCTAGACGAGGCAGCGCAGAGATGGCTTTACCAGAAGATGTCGGATAAGATCCAGTCCGCGATGGAGAGCTTGAGGAAG
ACGCTTCTGAACTTGAAGCAGCATTGACATTGATTCTTTTTGTTCGTTCTTCGACCATGGGGCAAGGATGCGCCGCCTTT
TTTCTCCGATACCTTGTTGAATTGGTTAGGGC--ATGGTAGCTTTGTTAGCTAGTTTCAGATGATGGGATCATGATACAG
CGATTGGGAGGATACGGGAATCGAGAGGGATGGAGTAGTTCTCCAGTGGACATTACACCTGCCATAGAAGCGGGGGGTG-
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-----------------------------AGAATTAGAGTTCAGAGTGTCAGATTTGGTGTTTTTC-TTTTTTGCAATAA
CAAGAGTATTCAGG-CTGTTGCCTAATTTCATGGCTCTTTGGACCGTATTGCCATTTTGTTTAGCCAAGGAACTGCCCAT
AGAGA-TTTTCACCATCTCGTGAATGTTATCTACAGTATGTCTGAAGCCTAAATCACCCTCGACGTTTTCTGAACCTGGA
GATGGTTTATCTTTTATATATACCTTTACTCATGTGAAAGACATAGTTGGTGTTGGTGATTATCCACCTGCCTACCTATA
TATACCAATTAATTATGATGTTGGAGGTACGTCGCTTTGCTTCGAAGGCCCAGAAGGGACCGATTTATTAGCTACGGGTG
GATCCAATTTTAGCTCTTGGCCATCATTCGCCTCCAAGGTGAACCATTATGTGTCCAAACCTTGTAGAGAAAGTGTTC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSS-------------------SSS--------S-----S---------S-----------
-------------------------------S-------------SS-S-SSS--SS-----------------------
-------------------------S-------S----------------------------------------------
-------------------------------------SS----------S-----------------------S------
--------------------------------S-----------------------------------------------
-----------------------------------------------------S--------------------------
------------------------S-------------------------------------------------------
--------------------------------S----------------S-S----S-----S----S--S---S--SS-
--S-------S--------SSSS-------------S-----------SS---S---S--S---S---------------
---S--S-SS------------------------------S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-S---------S-----------S--------S--SS-----SS----S------
---S-S-----S-----------S--------------------------------------S----------S------
---S--S-------S-S----S---S---------S------S--S--S--S-----S-----S----------------
---SSSSSS-S-SSS----------------S------------SS--S----S----S-----------S---------
--SSS--------S---------------------------------------------S--------------------
---------------------------------S---------------------------------------------S
--------------S--S----------------S--------S---S-----S-----S-S------------SSSS--
--------S----SS------------------------S-S-------------------S----S------SSS----
-------------------------------------------------S--------------S--SS------S----
-----------S----------------------S---SSS-S----S-------------SS------------S----
-------S-----S-------S------------SSS-------S-----S--S-------------------------S
----------S---------S------S-----S-SSSS-SS-----------S---S----------------------
S----------S--S--S-----S-------S--------SS---SSSS--S-----SS------------S--------
SS--S-------S-----------S----SS-------------------------SS--------S-------S-S---
--------------------S------S--------S---------S-----------------S---------------
--------------------------------------------------------------------------------
-S------------------------------------------------------------------------------
----------------S----------------------------S----------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------S--------------------------------------------------------------------
------S------S--------SSSS--------------------S--------------------------------S
--S-------------------------------------------S---------------------------------
--------------------S-----------------S--------S------------------------------S-
------------------------------S--------------------S----------------------------
--------------------------------------------------------------------------------
-------------------------------------S--------------S-------S----S---------S----
------------------------------S-S-----------------------------------------------
---------------S------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------------------S-------S-------------
--------------S-------------S-------S------S--S--------------S----------------S-
----SS-----------SS------------------------------------S------------------------
--------S--S----------------------------------------------------S-S-------------
--------------------------------S-----------------------------------------------
-------------S-----------------------------------------------------S----------
>forward_513
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------CTGCTCCTGTTGCAACACAC-----------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2080
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------------A
AGGCTCCTTGTCGTCTTCG-------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_611
--------------------------------------------------------------------------------
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-------------------------------GCATTTGTTGTGACACGGCT-----------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_2200
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------------------------------ACGAAACCCCACCCTCATTT---------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_615
--------------------------------------------------------------------------------
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-----------------------------------TTGTTGTGACACGGCTGGAT-------------------------
--------------------------------------------------------------------------------
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>reverse_2355
--------------------------------------------------------------------------------
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----------------------------------GCTTCAGGTATGCGTTTGCA--------------------------
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------------------------------------------------------------------------------
>forward_1818
--------------------------------------------------------------------------------
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--------------------------------------TGGCATGTTGCTGCATTGTG----------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_3599
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------GC
AGGCTTAAAGCAGGTGG---------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
>forward_2235
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CCCCACCCTCATTTGCTGTA-----
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_3631
--------------------------------------------------------------------------------
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------------------------------CCAAGACACATCCTTCGAAAGA----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>forward_2451
--------------------------------------------------------------------------------
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-------------------------------AGCGTCCATGGTTGATTGCA-----------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------------------------------------------------
>reverse_4429
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------GCATGGCTGTTTGGATCGGA--------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------------------------------------------------
