>input_sequence_28551
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-----------------------------------------ATGGAGGAGGACGCCGGCGAGGGCGAGGGCGAGGGCGAG
GTGGAGATCCGCGACTGGGCGGGGATGCCGTCGGACGCGCTCTTCGCGGTGTTCGGGAGGCTGGACGTGGCCGACATCCT
GACGGGGGCCGGGCGGGCGTGCCGCGCCTGGCGCCGCCTCGCCGACGGCGACCCCGCGCTGTGGCGCCGCCTCGACATGA
CCCACCACGGGGACATCCTCGAGACCGAGGAGGCCGAGGCCATGGCCCGCGCCGCCGTCGACCGCGCCGCCGGCACGCTC
CAGTCCTTCTGCGCCGACACCTTCGTCACCGACGCCCTCCTCAGCTACATCTCCGGCAGGTTGTTCGCGACGGCTCT-CC
CCTTCCTGTTTCACATGCCCATTTCTGGCATACAGTGGGGGGTTTTTTTTCCCCCAATTTGTGGATGCGGCGCTTAGTTT
ATTCATTCAGTTAAACGAACGGTTGCTGGCGCTGCTGGTAAATTAAAATTCATGGGGAAGGTC-TTTAACTTAAAATAAG
TCTGTATTCTGAAGTTGGAAATGGACCTTTCTGACGTTTGATTTGACAGGTTGAAAAAAACACACATTTTCATAACCTAA
CGAAATTGGATGGGGTAAAATGGTACTACTCAACAGTAAAATGCTTGCAAGTTGGAACAGATCACATGAGTCTCCAGTGC
TATGTCTTTGTGTGACTCAATGTGCCTTGCTAAGTTCTATCTACTCCGTAGCGTTGGGACATAATGTATGTGGAGCAACC
CGGAAAATGTATATAGAGTAGCACACTGACTGAAGGTTTGTTTTCCTGGAGGGAATTGGCCTGTTCCCACTAATA-----
-----------------------GTCAGAATGGGGGCATCATTGTGCT-CTTGGATATAACATTGGCACCGACCAATCCC
TAAAACATACAAGGATAGGTGAGTCTCAGCATGGAGACTTTACAGGGGGGAGGGCCATCTGAACTTTTTTGTTGGTTTCC
AGCAAATTACTTGCTGT-AAAGGTCTGTAGAAAACCAAATGATCACTTCGATGGTTCAGTACCATTTTTTTCTGATAAAG
AT-------------------------------------------------------------------------GTAGG
CAGTTTCACTGCAAGATTGATGCATGATGCAATTCGGCATTTCTGACAATCCTGCCTTTGGTAGCTGCAGACTTCTCTGT
TAACCTTCCTGTAACTGTTTTTGGTTCATGCATCTTCCAGTACCTTTCACTTGTACACAGTCCTCTCGTGCATTTAGATC
ATACAGAAACTTGCAACCTTGGAAACTTTCACGCTTTTATCCAACAATCCATCAGAATGTTTCCAAAATAACTCATGTAC
TTCAGGATGAATGTTTTAGTGTGCCTGCACTCTTCATG--TAGTTAACTTACATGTTGGGTGGGCCCACTACCTGGGTTC
AAATCATCATTTACTCGAATTGGTTCTTATGGATTATACTGTTGGAGCCACCACTACAACATTTCCTTGCATAC-AAAAA
AATTAAGGGCCTTACTGAATGTGCATCCAATTACCACTGGTGTATATCTGTATCGCATAGTATTAACAATCAAATCAACA
ACTATGCAGTGAAACGATAAATATGTAAAACTATTACTAGCTACTTTCTTTTATGGTATTGCAACTGTTATATCCCCCTC
ACTGAAGCAAAACCCCTAAGCTGCCCATAACTCCATATTCTTGTGGCCATTTGTTTGCTTGGTAAGCGTAGTGCTAGTCA
GAGTTGCTATTTTCTTATCGTTGTGTTGATCTTTTGGTGCATTGAAATAAATTGATCCCACTTCTTGTCTTCTTGACCAC
CTAACACCTGGCTCGTTGTCGTCTTCTTCTAATGGTTTGACTAGATGTGATATGTGGAG-------TTCAGACACAGTAT
CAAGTCATGTCGTATTTTGTTTAGAACTGCGTGCTGAAGTTCATTTGCATGTGACTGGAGTTAGACTTATTTGAAGACTA
TGGTGAATCTAACAGCATGGAATGTTTTACTTTCACATGGTTATTTCAATCAATTCTGTTGTTCTAGTGTTATTTCTTGT
CCTGAGCTTGGAAAGCATGATTGGGTTTGGCATTAGCTTAAATGCTTGTGTTAGATAAGAACTTGCCATGTCTCAATGCA
GGGCACCCTCGCTGAAGAGCCTTCAACTAAGCCTGTGTGATGAAGTATCCAATGAGGCGCTGGCAGATGCAGTCAAGGGC
TTTCCTCAGCTTGAGGAGCTGGAGATCACATTCTGCTCACTGAACAGCAACGTGTGCGAGTCAGTCGGCAGAGCCTGCCC
ACACCTGAAATCCTTTCGGCTGAACGAGCGCTGGACGGTCCTCCAAAGGGGGTTTGCAGTCTTTGAGGGCATGGATGATG
ACACGGGTGTGCTAGGGATCGCGAGCAGCATGCCCGAGCTCCGGGACCTCCAGCTGATCGGCAACAACCTGACCAACGCC
GGGCTGGCGGCGATCCTCGACCACTGCCCCCGCCTCGAGTCCCTCGACGTGCGCCGCTGCTGCAACCTCCAGATGGACGA
TGCCCTGAGATCCAAGTGCGCCAGGATCGGGAACCTCAGGCTCCCCGGGGACCCCATCTCCGACTTCAAGTACCGGGCTT
ACCTCGCTGGCAGTGATGACTACCCCGGCGGTTCCGACATCGAGGTCGACATGTACGATGATCTGCTGGACGTGGTCACC
GACGACGACGAGGATGCCGAGTTTGATGACATGGAGGATTATATCGACGACGCGGACTGGGACGCCGACATGTATGATGA
TGTGTTCGATG---TCTGA-------------------------------------------------------------
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>chr1B_1_TraesCS1B01G041200
GAAAATCGGAGCGGTCGTACGTGGGTGGAATCGTGCGGATCTGTTGCTAACGACCAGTCGACTGGTCGTTAGCACAGTCC
TTTATATTAATATGATGATGATGATGAGTTATTATATCATTTAATGAAAGAAATCACAGATTAGTTTCAGCTGGATGGAT
CCTACCTAAGTGATCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATACTTGATCACCTAAGCCCTAAGGTCTTTTTATCAGATGGGCCGG
GCTTGGGCTTGAAAAGTAGGCCCTGGAGGGCCTGGGCCTCAATTTTCTGTGGTGGGCTTTTTAAGGCCCGGCCCAAGCCC
GGCCCGGCCCAAGCCCGGCCCGGCCCAAGCCCGGCCCGGCCCGGACCATGGCCAGGTATAGCCAGAGCCGATGCTGTATT
ATTTTTCTAAATTGTCAAAACAGCATATTATTTCTCAAATTTATTAAAAATGTAGTACTATTATTTTTTTACAAAAATAG
CAAATATCTGATGGGCATGCATTATTGTGTTTCGGGGGAGCGGGCGGTAAAAATTACCGCTGCGTTAATTGGTGAGCGAG
TGAAGTCTCTCTGTCCTCCTTCTCACCCACCCACCCCACCCC-ACGCCGACCACCCCCCCTCTCCTCCCCCTCCCCTTCC
GGCAAACCCTAGCCTAGCCCCGCCCCGCCGCATCCCGGCCCATGGAGGAGGACGCCGGCGAGGGCGAGGGCGAGGGCGAG
GTGGAGATCCGCGACTGGGCGGGGATGCCGTCGGACGCGCTCTTCGCGGTGTTCGGGAGGCTGGACGTGGCCGACATCCT
GACGGGGGCCGGGCGGGCGTGCCGCGCCTGGCGCCGCCTCGCCGACGGCGACCCCGCGCTGTGGCGCCGCCTCGACATGA
CCCACCACGGGGACATCCTCGAGACCGAGGAGGCCGAGGCCATGGCCCGCGCCGCCGTCGACCGCGCCGCCGGCACGCTC
CAGTCCTTCTGCGCCGACACCTTCGTCACCGACGCCCTCCTCAGCTACATCTCCGGCAGGTTGTTCGCGACGGCTCT-CC
CCTTCCTGTTTCACATGCCCATTTCTGGCATACAGTGGGGGGTTTTTTTTCCCCCAATTTGTGGATGCGGCGCTTAGTTT
ATTCATTCAGTTAAACGAACGGTTGCTGGCGCTGCTGGTAAATTAAAATTCATGGGGAAGGTC-TTTAACTTAAAATAAG
TCTGTATTCTGAAGTTGGAAATGGACCTTTCTGACGTTTGATTTGACAGGTTGAAAAAAACACACATTTTCATAACCTAA
CGAAATTGGATGGGGTAAAATGGTACTACTCAACAGTAAAATGCTTGCAAGTTGGAACAGATCACATGAGTCTCCAGTGC
TATGTCTTTGTGTGACTCAATGTGCCTTGCTAAGTTCTATCTACTCCGTAGCGTTGGGACATAATGTATGTGGAGCAACC
CGGAAAATGTATATAGAGTAGCACACTGACTGAAGGTTTGTTTTCCTGGAGGGAATTGGCCTGTTCCCACTAATA-----
-----------------------GTCAGAATGGGGGCATCATTGTGCT-CTTGGATATAACATTGGCACCGACCAATCCC
TAAAACATACAAGGATAGGTGAGTCTCAGCATGGAGACTTTACAGGGGGGAGGGCCATCTGAACTTTTTTGTTGGTTTCC
AGCAAATTACTTGCTGT-AAAGGTCTGTAGAAAACCAAATGATCACTTCGATGGTTCAGTACCATTTTTTTCTGATAAAG
AT-------------------------------------------------------------------------GTAGG
CAGTTTCACTGCAAGATTGATGCATGATGCAATTCGGCATTTCTGACAATCCTGCCTTTGGTAGCTGCAGACTTCTCTGT
TAACCTTCCTGTAACTGTTTTTGGTTCATGCATCTTCCAGTACCTTTCACTTGTACACAGTCCTCTCGTGCATTTAGATC
ATACAGAAACTTGCAACCTTGGAAACTTTCACGCTTTTATCCAACAATCCATCAGAATGTTTCCAAAATAACTCATGTAC
TTCAGGATGAATGTTTTAGTGTGCCTGCACTCTTCATG--TAGTTAACTTACATGTTGGGTGGGCCCACTACCTGGGTTC
AAATCATCATTTACTCGAATTGGTTCTTATGGATTATACTGTTGGAGCCACCACTACAACATTTCCTTGCATAC-AAAAA
AATTAAGGGCCTTACTGAATGTGCATCCAATTACCACTGGTGTATATCTGTATCGCATAGTATTAACAATCAAATCAACA
ACTATGCAGTGAAACGATAAATATGTAAAACTATTACTAGCTACTTTCTTTTATGGTATTGCAACTGTTATATCCCCCTC
ACTGAAGCAAAACCCCTAAGCTGCCCATAACTCCATATTCTTGTGGCCATTTGTTTGCTTGGTAAGCGTAGTGCTAGTCA
GAGTTGCTATTTTCTTATCGTTGTGTTGATCTTTTGGTGCATTGAAATAAATTGATCCCACTTCTTGTCTTCTTGACCAC
CTAACACCTGGCTCGTTGTCGTCTTCTTCTAATGGTTTGACTAGATGTGATATGTGGAG-------TTCAGACACAGTAT
CAAGTCATGTCGTATTTTGTTTAGAACTGCGTGCTGAAGTTCATTTGCATGTGACTGGAGTTAGACTTATTTGAAGACTA
TGGTGAATCTAACAGCATGGAATGTTTTACTTTCACATGGTTATTTCAATCAATTCTGTTGTTCTAGTGTTATTTCTTGT
CCTGAGCTTGGAAAGCATGATTGGGTTTGGCATTAGCTTAAATGCTTGTGTTAGATAAGAACTTGCCATGTCTCAATGCA
GGGCACCCTCGCTGAAGAGCCTTCAACTAAGCCTGTGTGATGAAGTATCCAATGAGGCGCTGGCAGATGCAGTCAAGGGC
TTTCCTCAGCTTGAGGAGCTGGAGATCACATTCTGCTCACTGAACAGCAACGTGTGCGAGTCAGTCGGCAGAGCCTGCCC
ACACCTGAAATCCTTTCGGCTGAACGAGCGCTGGACGGTCCTCCAAAGGGGGTTTGCAGTCTTTGAGGGCATGGATGATG
ACACGGGTGTGCTAGGGATCGCGAGCAGCATGCCCGAGCTCCGGGACCTCCAGCTGATCGGCAACAACCTGACCAACGCC
GGGCTGGCGGCGATCCTCGACCACTGCCCCCGCCTCGAGTCCCTCGACGTGCGCCGCTGCTGCAACCTCCAGATGGACGA
TGCCCTGAGATCCAAGTGCGCCAGGATCGGGAACCTCAGGCTCCCCGGGGACCCCATCTCCGACTTCAAGTACCGGGCTT
ACCTCGCTGGCAGTGATGACTACCCCGGCGGTTCCGACATCGAGGTCGACATGTACGATGATCTGCTGGACGTGGTCACC
GACGACGACGAGGATGCCGAGTTTGATGACATGGAGGATTATATCGACGACGCGGACTGGGACGCCGACATGTATGATGA
TGTGTTCGATG---TCTGAAGGAGCTGTGACTAGGACCGGGTC-GGGTTCTCACGTGGAAGGAAGGACGGGAACTTGGTG
CTGAAACAATGTGGTCTTTACCTGTGTTTAGATTCTTGAAGCT--GGGTTC-----------------------------
-----------TCTTACGTTTGTTAACTAGTCTGCTACTCTCTTGCTGTGAAACTGGGTTCGCTTTCTCTCCGCGACTGT
AATTTTATGCCGCACCTGTGATTTGGTCATGCAATAAAACCCTGTAAATTAAGTACCGACACCAATGCTATATTGCGTTA
GGTTTGATGATGCCCTAGTCTTTGCCCGTGTCGTGGCTATTGAGTCGTGTTGCGCCGAATCTATTTTGAAGTTAACGGCA
TAAAAAGATCGCAAGCTTATGCAATTGGGTTGTCGAACTGAATCTATGCAAGTTCACGGCATAAAGCTCGTAAGCA----
-------------------------------------------------ATGAGGCTTCTGTGGAGCCATTGCTACGTGG
CTGGTACT------------GTACTGAAGAACGGATTTTCGAAGCACACTATGTTGAACAGCTCGAAAATGGCATTTGGA
AGTTTCGGAAAAGTTGGGTGTTTTCTTTACACGTCGTTCTGC-------------ACGCACCTGGTAATTTTCGTTTGAT
GGTGCAGTGCAGATAAGAACACAAAAGATCCAGCA--------CAAAGAAATGCCCATTGTTTGCATGTCTTTGGCCCTT
CTTTATATCTCACATACAAAACCGTATATTGATTAAACATCC---------------------ATATATTCGCGTAAAAT
AAATCAGATTTTTTTGAATCGGAAGTTCTGAACCATAATAAACAAAAAAAATTCAAACTAACGTGCTCAATGGTACTAGG
AAGGTGGGAATCCTAG----------ACTTGGATAAACAGG---------------------------------------
-AAGATTCAAACTGTAAATCCTCCGAATGCCGCATGCATTTGCAGCATGGTGCTAACTACAACCTTCCCCATAAATCTAG
CTTGCATTCGCTGAAACCGAAACCGGGATATCTTTT----------------------TCAGAATAACTCCACCGAATAT
CATGCCCATATTTCCAAAGATCTACACCACTTACAAGACAC
>chr1A_802
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-AAATATCTGTGGGGCATACATTGTTGTGTTTTTGGGGAGCGGGCCGTAAAAATTACCGCTGCATGATTGG-T----GAG
TGAAGTCTCTCCGTCCTCCTCCTCACCCACCC---------CCACGCCGACCACC-----TCTCCTCCCCTCCCCATTCC
GGCAAACCCTAGCCTAGCCCCGACTCACCGCC-----GCCCATGGAGGAGGACGCGGGCGAGGGCGAGGGCGAGGTC---
---GAGATCCGCGACTGGGCGGGGATGCCGTCGGACGCGCTCTTCGCGGTGTTCGGGAAGCTGGACGTGGCCGACATCCT
GACGGGGGCCGGGCGGGCGTGCCGCGCGTGGCGCCGCCTCGCCGACGGAGACCCCGCGCTGTGGCGCCGCCTCGACATGA
CCCACCACGGGGACATCCTCGAGACCGAGGAGGCCGAGGCCATGGCCCGCGCCGCCGTCGACCGCGCCGCCGGCACCCTC
CAGTCCTTCTGCGCCGACACCTTCGTCACCGACGCCCTCCTCAGCTACATCTCCGGCAGGTCGCTCGCCGCGGCTCTCCC
CCTTCCTGTTTCACATGCCCATTTCTCTCATATACGATGGGGATTTTTTTTCCCCAATTTGTTGATGCGGCGCTTCATTT
ATTCATTCAGTTAGACGGACGGTTGCTGG---------TAAATTAAAATGCATAGAAGAACTC-TTGAACTGAAAATAAG
TCTGTATTCTTTAGTTGGAAATGGACCTTTCTGCTGTTTGATTTGACAAGTTAAAACAAAATT---TCTTGGTAACCTGA
CAGAATTGGATGAAGTAGTAAAATGGTACCCAACGGCAGATTGCTTGCAAGTTGTAACATATCACATGAGTCTCTAGTGC
TATGTCTTTGTGCGACCCAATGTGCCTTGCTAAATTCTGTCTATTCCGTAGCGTTGGATATA-----ATGTGGAGCAACC
TGGAAAATGTATATAGTGTAGCACACT----GAAGGTTTGTTTTCCTGGAGGGAATTGGCCTGTTCCCACTAATCTCAGC
TAAGACCCGGATTTTTGGGACTGGTCAGAATGGGGGTATCATTGTGCT-CTTGGATGTAACATAGGGACCGACCAATCCC
TAAAACATACAAGGATAGTTGAGTCTCAGCATGGAGACTTTACAGGGGGAAAGGCCATCTGAACTTTTCTGTTGGTTTCC
AGCAGATTACTTGCTGTAAAAGGTCTGTAGAAAACCAAATGATCACTTTGACAGTTGAGTACCATTTTTTTCTGATAAAG
AT-------------------------------------------------------------------------GTAGG
CAGTTTCACTGCAAGATTGATGCATGATGGAATTTGGCATTTCTGACAATCCTGCCTTCGGTAGCTGCAGATTTCTCTGT
TAATCTTCCAGTAACTGTTTTTGGTTCATGCATCTTCCAATACCTTTCACTTGTACACAGTTCTCTCCTGCATTTAGTTT
ATCCAGAAACTTGCAACCTGGGAAACTTTCACACTTTTATCCAACAATCCATCAGAATATTTCCAAAATAACTCTTGTAC
TTCAGGATGAACGTTTTCGTGTGCCTGCACTCTTCATGTATAGTTAGCTTACATATTGGGTGGGCCCACTGCCTGGGTTC
AAATCATCATTTACTCGAATTGGGTCATATTGATTATACTGTTGGAGCCACCACTACAACATTTCCTTGTATAC--AAAA
AATTAAGGGCCTTACTGAATGCCCATCCAGTTACCACTGGTGTAAATCTGTATCGCATAGTATTAACAATCAG-TCAACA
ACTATGCAGTGAAACGATAAATATGTAAAACTGTTACTGGCTACTTTCTGTTATGGTATTGCGACTGTTATAT-CCCCTC
ACTGAAGCAAAACCCCTAAGCTGTCTATAACTCCATATTCGTGTGACCATTTGTTTGCTTGGTCAGCGTAGTGGTAGTCA
GAGTTGCTATTTTCTTTTCGTTGTGTTGATCTTTTGGTGCATTGAAATAAACAGATCCCACTTC--------TTTACCAC
CTAAAACATGGCTCGTTGTCCTCTTCTTCTAATGGTTTGACTAGATGTGATATGTAGAGCTAAGACTTCAGATACAGTAT
CAAGTCATGTCGTATTTTGTTTAGAACTGCATGCTGAAGTTCATTTGCATGTGACTAGAGTTAGACTTATTTGAAGACTA
TGATGAATCTAACAGCATGGAATGTTTTACTTTCACATGGTTATTTCAATCAATTCTGTTGTTCTAGTGTTATTTCTTGT
CCTGAGCTTGGAA-GCATGATTGGGTTTCGCATTAGCTTAAATGTTTGTGTTAGATAAGAACTTGCCATGTCTCAATGCA
GGGCACCCTCGCTGAAGAGCCTTCAACTCAGCTTGTGTGATGAAGTATCCAACGAGGCGCTGGCAGAGGCAGTCAAGGGC
TTTCCTCAGCTTGAGGAGCTGGAGATCACATTCTGCTCACTGAACAGCAACGTGTGCGAGTTAGTCGGCAGAGCCTGCCC
ACAACTGAAATCATTTCGGCTGAACGAGCGCTGGACGATCCTCCAAAGGGGGTTCGCGGCCTTTGAGGGCATGGATGATG
ACACGGGAGCGCTCGGGATCGCAAGCAGCATGCCTGAGCTCCGAGACCTCCAGCTGATCGGCAACAACCTGACCAACACC
GGACTGGCCGCGATCCTCGACCACTGCCCCCGCCTCGAGTCCCTCGACGTGCGCCGCTGCTGCAACCTCCAGATGGACGA
CGCCCTGAGGTCCAAGTGCGCCAGGATCGGGAACCTCAGGCTTCCTCGGGACCCCATCTCCGACTTCAAGTACCGGGCTT
ACCTCACTATCAGTGATGACTACCCCGGCGGTTCCGACATCGAGGTCGACATGTACGATGATCTGCTGGACGTGGTCACC
GACGACGA---GGATGCTGATTTCGATGACATGGATGATTATATCGACGGCGTGGGCTCGGATGCTGACATGTATGATGA
CGTGTTCGATGATGTCTGAAGGAGCTGTGACCAGGAC-----C-GGGTTCTCACGTGGAAGGACA---GGGAACTTGGTG
CCGAAGCAATGTGGTCTTTACCTGTGTTGAGATTCTTGAAGCT--GGGTTCACGCACTTTGTTATCGAAGGTCGATTCTC
GTATGTTTGTGTCTCCGGTGTGTTAACTGGTCTACTCTC-----GCTGTGAGACTGGGTTCGCTTTATATCTGTGATTGT
AATT-TACGCCGCACTTGTGATTCGGTCACGCAATAAAATCCTGTAAATTAAGTATTGACACCAATGTTATGTCGTGTTA
GG-TTGATGATGTCCTAGTGTTTGCCCGTGTCGTGGTTATCGAATCG---------------------------------
------------------------------TGTTGAGCTGAATCTGTTTAAACTGACGGCATAAAGCTCACAAGCTTGTG
CAGTTGTTGCTTGCAATAATGAAATGCCGGCTTGTGCACCCAGTGACAGATGAGACTTCTGTGGAACTATTGCAACTCAA
ACGTAACTGTGACGTGGCCGGTACTGAAGGACGGATTTTTGGAGCACATTATGTTAAACAACTCGAAAATGGCATTTGGA
AGTTTTGAAAAGA------GTTTTCTTTACACGGATATATGTATGGATGTTTGCTACGCTTCTGTTAACTTTCGTTCAAT
AATACACTGCACGATAAAAGAAAAGAATCCAGCCCCAAAACATCAAAAACAAGCCAATCTTTTGCATGTATTTTGTCTTT
TTGGTAGTCTCACATACAAACACATATATTGATGAAACTTGTATAGATACACTACACATCTATATATAGGCACGGAAAAT
ACATCGGAATTTTTCTAGCCATATTTTTTTTTCAAACATAAAACATAGCATGCTCGATGTGGCCATGCTCCAAGTCCAAA
GTGACTTGCGGCTGGCACGACTTACAACTTAGATAAACTGGGTTCACGAACATGGTCAGTGTAATTTTATACGTTGTAAA
TAAGATTCAAACCATAAATCGTCAGAACTACTTGTCTTAGATTTGTCTAGATACGGATGTATCTAGCACTAAAATGAGTC
TAGACAAATCCAAGACAAATAATTTAGAACGGAGGGGGTATATATTATATATATGGTCTCAGAATAACTCCACCAAATAT
CATGCCCATATTTCCAAAGATCTACACCACATACAAGGCAC
>chr1D_838
GAG-----------------------------------------------------------------------------
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-----------------------------------------GGGCCGTAAAAATTCCCGCTGCATGATTGGGT----GAG
TGAAGTCTCTCTGTCCTCCTTCTCACCCACCC---------C-ACGCCGACCACTCCCCC-CTCCTCCCCCTTCCCTTCC
GGCAAACCCTAGCCTAGCCCCACCGCATCGCC-----GGCCATGGATGACGACGCCGGCGAGGGCGAGGGCGAGGTC---
---GAGATCCGCGACTGGGCGGGGATGCCGTCGGACGCGCTCTTCGCGGTGTTCGGGAGGCTGGACGTGGCCGACATCCT
GACGGGCGCCGGGCGGGCGTGCCGCGCGTGGCGCCGCCTCGCCGACGGCGACCCCGCGCTGTGGCGCCGCCTCGACATGA
CCCACCACGGGGACATCCTCGAGACCGAGGAGGCCGAGGCCATGGCCCGCGCCGCCGTCGACCGCGCCGCCGGCACCCTC
CAGTCCTTCTGCGCCGACACCTTCGTCACCGACTCCCTCCTCAGCTACATCTCCGGCAGGTCGCTCGCCACGGCTC-CCC
CCTTCCTGTTTCACATGCCCATTTCTCTCGTACGAT---GGGGATTTTTTCCCCCCATTTGTGGATTTTTTTTCGCAAAA
AA----------AAACGAACAGTTC---------CTGGTAAATTAAAATGGATAGAAGCACTCTTTTAGCTGAAAATAAG
TCTGTATTCTTTAGTTGGAAATGGACCTTTCTGCTGTTTGATTTGACAAGTTAAAACAAAATT---TCTTGGTAACCTAA
CAAAATTGGATGAAGTGGTAAAATGGTACCCAACCGCAGATTGCTTGCAAGTTGAAACAGATCACATGAGTCTCGAGTGC
TA-GTCTTTGTGTGACTCGATGTGCCTTGCTAAATTCTGTCTACTCGGTAGC-TTGGGACATAATGTATGTGGAGCAACC
CGGAAAATGTATATAGAGTAGCACACT----GAAGGTTTGTTTTCCTGGAGGGAATTGGCCTGTTCCCTCTAATCTCAGC
TAAGATCGGGATTTTTGGGACT-----GAATGGGGGTATCACTGTGCTACTTGGATATAATATAGGGACCGACCAATCCC
TAAAACATACAAGGATAGTTGAGTCTCAGCATGGAGACTTTACAGGGGGGGAGGCCATCTGAACTTTTCTGTTGGTTTCC
AGCAAATTACTTGCTGTAAAAGGCCTGTAGAAAACCAAATAATCACTTTGACGGTTGAGTGCCATTTTTTTCTGATAAAG
ATAAAGATGTAGATTAGCTCTGTCCTGATTGAGTGGCTTCTATGTGTTTTCTTCTGCTGGTGTTCGTCTCCTGAAGTAGG
CAGTTTCACTGCAAAATTGATGCATGATGGAATTTGGCATTTCTGACAATCCTTCCATCGGTAGCTGCAGACTTCTCTGT
TAATCT-CCAGTGACTATCTCTGGTTCATGCATCTTCCAGTACCTTTCACTTGTACACAGTTCTCTCGTGCATTTAGATT
ATCCAGAAACTTGCAACCTTGCAAACTTTCACATTGTTATCCAACAAGCCATCAGAATCTTTCTGAAATAACTCATGTAC
TTAATGATGAACGTTTCAGTGTGCCTGCACTTTTCATG--TAGTTAACTTACACATTGGGTGGGCCCACCACCTGGGTTC
AAATCATTATGTACTCGAATTAGTTCATATTTACTACACTGTTGGAGCCTCCTCTACAATATTTCCTCACATACAAAAAA
AACTAAGGGCCTTACTGAATGCGCATCCAGTTACCACTGGTACAAATCTGTATTGCATGGTATTAACAATCAAATCAACA
ACTATGCAGTGAAACGATAAATATGTAA--CTGTTACTAGCTACTTTCTGTTATGGTATTGCAACTGTTATAT-CCCCTC
ACTCAAGCAAAACCCCTAAGCTGTCCATAACTCCATATTCGTGTGACCATCTGTTTGCTTGGTAAGCGTATTGCTAGTCA
TAGTTGCTATTTTCTTATGGTTGTGTTGATCTTTTGGTGCATTGAAATAAACTGATTCCACTTC--------CTGACGAC
CTAACACATGGCG---------------------------------------------------------------GTAT
CAAGTCATGTGGCATTTTTGTTTAGAAC-----------------TGCATGTGACTGGAGTTAGACTTATTTGAAAGTTA
TGATGAATCTGACAGCATGGAATGTTTTACTTTCACATGGTTATTTCAATCAATTCTGTTGTTCTAGTGTTATTTCTTGT
CCTGAGCTTGGAAAGCATGATTGGGTTTGGCGTTAGCTTAAATGTTTGTGTTAGATAAAAACTTGCCATGTCTCAATGCA
GGGCACCCTCGCTGAAGAGCCTTCAACTCAGCATGTGTGATGAAGTATCCAACGAGGCGCTGGCAGAGGCAGTCAAGAGC
TTTCCTCAGCTTGAGGAGCTGGAGATCACATTCTGCTCCCTGAACAGCAACGTGTGCGAGTCAGTCGGCAGAGCCTGCCC
ACACCTGAAATCCTTTCGGCTGAACGAGCGCTGGACGATCCTCCAAAGGGGGTTTGCAGCCTTTGAGGGCATGGATGATG
ACACGGGAGCGCTCGGGATCGCGAGCAGCATGCCCGAGCTCCGAGACCTCCAGCTGATCGGCAACAACCTGACCAACACC
GGACTGGCCGCGATCCTCGACCACTGCCCCCGCCTCGAGTCCCTCGACGTGCGCCGCTGCTGCAACCTCCAGATGGATGA
TGCCTTGAGATCCAAGTGCGCCAGGATCGGGAACCTCAGGCTTCCCCGGGACCCCATCACCGACTTCAAGTACCGGGCTT
ACCTCGCTATCAGTGATGACTACCCCGGCGGTTCCGACATCGAGGTCGACATGTACGATGATCTGCTGGACGTGGTCACC
GACGAGGA---GGATGCCGAGTTCGATGACATGGCTGATTATATCGACGGTGTGGGCTCGGACGCTGACATGTATGATGA
CGTGTTCGACGATGTCTGAAGGAGCTGTGACCAGGAC-----CCGGGTTCTCACGTGC----AAGGACGGGAACTTGGTG
CTGAAGCAATGTGGTGTCTA-CTGTGTTGGGATTCTTGAAGGACCGGGTTCACGCACTTTGTTA----------------
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>SNPs
--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
S---------SS------S----S--------SS-----------S-----------------S-S-S-S---SSSS---
--------------------------------SSSSSSSSS---------------------------------------
------------------------S-S----SSSSSS--------------------------------------S-SSS
SSS-----------------------------------------------------------------------------
---------------------------S----------------------------------------------------
----------------------------------------------------------------------------S---
-------------------------------------------------------------S-S----S-----------
--------------------------SS------S-SS----S--------------------------------SS---
-----------------------------SSSSS---------------S---S-SSS-SS----------S--------
----------SS---------------------SS-------------S---S---S---SSSSSS-S--SS--------
-S----------SS---SS-SSS-SS---S----S-S-S-S-------------S-------------------S-----
---------------------------------S----S-----------------------------------------
---------------------------SSSS-------------------------------------------S-----
------------------------------------S--------------------------S--S-------------
------------------S--------------------------------S----------------S-----------
------------------------------------------------S--S----S-----------------------
--------------------------------------------------------------------------------
-----------------------------S----S-----------------------S---------------------
---S-----S---------------------------------------------------S-----------------S
--S-----------------------------S-------------------------S---------------------
-----------S------------------------------------------S-------------------------
--------------------------S---S-------------------------------------------------
---------------------S-------S--------------S-----------------------------------
--------------------------------S----------------S-----------------------S------
-----------------------S----------------S----S----------------------------------
---------------------------------------------------S------------SSSSSSSS--------
-------S------------S----------------------------------S----------------S-------
------------------------------S-------------------------------------------------
--S-----------------------------------------------------------------------------
--------------------------------------------S-----------------------------------
----------------------------S---S-------------------S--------------S------------
--------------------------------------------------------------------------------
-------------------------------------S---------------------S--------------------
-------S-S---S-----------------------------S---------------------------------S--
--S-----S-----------------------------------------------------------------------
------------------------------------------S---S---------------------------------
--------SS----------------------------------------------------------------------
--------SSS------------S-----------S-------------S--S--S--S------S--------------
S------------------------------S-----SSSSS--------------------------------------
-----S----------------------S---------------------------------------------------
--------------SSS--S--------S----S--SSSSSSSS-------S--------------S-S--S-S--S---
----S--S-------S-------S-----S---------S---------------SS----------S---S-S-S----
--S---------S------S----------------S---S--S---SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S--S--------S-SS--SS-S--------------SS----S----
------------------------------------------------------S----------S-S-----S--SSSS
SS-SS------------------------S---------S-S------S------S----S-------------------
-----S-S---SSSSSSSS--------------SSSS-S--S-----------------SS---S---S-------SS--
SS-S--S----SSSS-S--S-S--S-SSS-SSS-S------------S-S-S---S--SS---------S---S-S-S--
S-SSSSS-------------SS-S---------S----S-SS--------------------------SS-S--S-----
-S---S--S-----SS-SS-SS-SS--S-SSS-S-SS-----SS-S-SS-SSSSSS-SSSSSSSSSS-SSSSSSS-S-SS
SS-SSSS-SSS-SSSS--------------S-------S-----------------------------------------
------------SS------S--S---SSS-SSS-SSSSSSSSS-SS-S-SSSSSSS-SS-S-SSS-S-S-S--SSSSSS
SSSS--SSSS-SSS-SSSSS--SSSS--SSSSSSSS--------------------------------------S-----
------------------------------S------S---
>forward_47
---------------------------GAATCGTGCGGATCTGTTGC---------------------------------
--------------------------------------------------------------------------------
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>reverse_1904
--------------------------------------------------------------------------------
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---------------------------------------------------------------TGGCACCGACCAATCCC
TAA-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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-----------------------------------------
>forward_702
--------------------------------------------------------------------------------
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------------------------------------------GGACCATGGCCAGGTATAGC------------------
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-----------------------------------------
>reverse_2714
--------------------------------------------------------------------------------
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-------------------------------------------------------------------------CCCCCTC
ACTGAAGCAAAAC-------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>forward_876
--------------------------------------------------------------------------------
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--------------------------------------------------------CCGCTGCGTTAATTGGTGAG----
--------------------------------------------------------------------------------
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>reverse_2888
--------------------------------------------------------------------------------
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-------CTGGCTCGTTGTCGTCTTCT-----------------------------------------------------
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-----------------------------------------
>forward_1470
--------------------------------------------------------------------------------
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----------TTAAACGAACGGTTGCTGGC--------------------------------------------------
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-----------------------------------------
>reverse_3398
--------------------------------------------------------------------------------
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-------------------------------------GTCCTCCAAAGGGGGTTTGC-----------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>forward_2901
--------------------------------------------------------------------------------
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-TAACACCTGGCTCGTTGTCG-----------------------------------------------------------
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-----------------------------------------
>reverse_3819
--------------------------------------------------------------------------------
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----------------------------------------------------------GGGACGCCGACATGTATGAT--
--------------------------------------------------------------------------------
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-----------------------------------------
>forward_3448
--------------------------------------------------------------------------------
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--------------------------------------------------------------------GCATGGATGATG
ACACGGGT------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-----------------------------------------
>reverse_4316
--------------------------------------------------------------------------------
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---------------------------------------------------------------------------AATGA
GGCTTCTGTGGAGCC-----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------
