>input_sequence_28511
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------ATGAGAGATGGCTGCAACACCACCAAGAAGAGCAAGGTACCGCCCTCCCATCCCTCTGTCTTCTTCCTCCTGAT
TGCTCTGTTTCCCTGTGCCTGAATGCGGTTCGGTTGCTGTGGCGTGTAGCTGTCGTGGTCCAAGAGCCTGGTCAGGAAGT
GGTTCAACATCAGGAGCAAGGCCCACGACTTCCACGCCGACGACGCCGCCGCGGCCTCCGGGAGGAGAGGCGGCGGCGAC
GA---TGAGGAGTGGAGGGGCAGCAGCTTCGCCAGGAACGAGCCGGCCAGCGCCGCCAAGAAGAGCCGGACGGAGAGGCC
GTCCAGGCGGAGCCGCGAGCACTCTAGGCGGGGCAAGATCGACCTCGACGCCGCCGAGGCCACCGTCACCATGGACTACA
GGTTGCTCCGCCGC--------CCGCCCCTGCATTCGCATTACATAATTCCATCTTCGTCTCCGCTCT----CCTGTGTG
TGTGGCCTT---GTTAGTTAAAAAAAGAACGAAACTGCCTGCAGGATCTTCGTTGCTACGTGGAATGTGGGCGGCCGATC
CCCTCCCGGCGGCATGGGCCTCGAGGACTGGCTCCACGCCGCGCCGCCCGCCGACATCTACGTCCTCGGGTACGTGTCCC
CGGATTTCTCCGTGCCGGATTCCTCAATGCTGCGGCTCGGGCTGACAATTTCGGTGCCGCCGTGGTGTTCGTCCAAAGGT
TCCAAGAGATCGTGCCGCTGAACGCCGGCAATGTGCTGGGCACGGAGGACAACGGGCCGGCGAGGAAGTGGGTGTCGCTG
ATCAGGAGGACGCTGAACGACCTGCCGGGCGCCGGCAGCGGCAGCGGCAACGGGAGCTTCCGGACGCCGTCGCCGGCGCC
GCCGGAACCGGTGGCGGAGGCGGACGACGACTTCGAGGGGGCGAGGCACCAGACCAACAACGCGGCCTTCTTCCACCGCC
GGTCCTTCCACAGCCGGAGCCTGCGGATGGAGGGCGACGCCCTGGCGCCGCAGCCCAGGCTGGAGCGCCGGTACAGCGTC
TGCGACCGCGCGATCTACGGCTCCCGCCGGCCCAGCGACTACGAGGCGCACTGCCGGTGGGGCGGCTCGTCGGACGACGA
CAACAACACCGGGGAGTCGCCCAGCACGGTGTACTCGCCCATGTCTTACGGGTACGGCCACGCGCCGTCCCTGGACGACG
GCCATAGGCCAGCTTCTGGTCACACTAGGTACGATTCAAGTTCCATGCCATGTACTCTGTCAACACATGCTATTTTTAAT
GGAGACAAAGTACATTATGGTCTCATAAATAGATGTGGTGGGTAATCTGTGTTGTGATCCGTGTTGCAATCTGATGTTCT
TCAGATATTGCCTGGTTGCAAGCAAGCAAATGGTGGGGTTGTTTCTGATGATTTGGGCTCGGAAGGACATTAGGGATGAC
ATCAGAAATCTCAAGGTTTCTTGTGTTGGCAGAGGATTGATGGGCTACCTTGGGAACAAGGTTGGTCACTGTTCCTACCA
CAAATGCTATGTGGTTATTATGATTTTTGCAATAATGTTTTGCATTTTATGAATTGATCACAAACAAGAGGCATTGTTAG
CTTAGATATAGTATTCAACCGGCAAAGGATTTGTTTTCCAGGGTTCGATTTCGATTAGCATGACATTGCACCAAACAAGC
TTCTGCTTCGTCTGCAGCCACCTGACGTCGGGGCAGAAGGAAGGCGACGAGATGCGGAGGAACTCAGATGTGCTTGAGAT
CCTCAGGAAGACCAGGTTCCCAATGGTTTACGGGCAGTATGAGCGCTCACCGGAAACTATCTTAGAGCATGAGTAAGCAA
GCACAGAACCTTGGAATTGTCCCCTAAAGCTTGTTTTCATGTGCATTTGGTGCAATATTGGGGCCCTTAACGCGCCTTTT
CTTTCAGTCGAATCATCTGGCTCGGGGACCTAAATTACCGAATCGCACTTTCCTATCGGTCAGTGAAGGCCCTGGTGGAG
ATGCGCAATTGGAAAGCATTGCTGGAGAAGGATCAGGTGAGAGCTTGCAAACCTTCTTGAGCACAATTTGTGTATGTGTG
GTGTGTACCGTTGGGATCCCCGGAAAGCTGTAAAATTGTTGTGTCACAGGCAATCAGTGCTTTTGTCTTGTCATTCTTTT
ACTTTACCATGTTGCAACATTACTAATCGGTCGGTAAAAGCCGAGGAGCTCTTGTTGTTCTCATTATGAAAATGATTACC
AGACATTGTAGTAGTATGATCTCATTGACATGTCAACTTGACACTTTCAGCTAAGGATTGAACAAAGAGGTGGGCGGGTG
TTTGCCGGGTGGAACGAGGGGAGGATATACTTCCCACCGACATACAAATACTCGACCAATTCCGACAAGTATGCCGGGGA
AGACATGAACCAGAAGGAAAAGAGGAGAACTCCTGCATGGTAC-ATTATATTACACTAATGTGCCGGATATTTGCCAGAT
TTTGTACAGTTCAAAGTGAACTTAGTGATCTTGTCGTGCAGGTGCGATCGCATTTTGTGGTATGGAAGGGGCCTAGGTCA
ACTATCATACGTTCGAGGCGAGTCTCGGTTCTCAGATCATAGGCCAGTCTACAGCGTATTCAGTGCGGAGGTGGAGTCGA
TCAACCACAGCCGAATTCAAAAAATGAGTTGTTCAAGCTCGCAGTTGGACATCGGAGAGCTACTGCCCTACTCTTACGGA
TACACCGACATCAACCCGTATGGCTACACCGACCTAAATTTCTACTGA--------------------------------
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>chr4A_1_TraesCS4A01G029300
TACTGGCATGGCATGGCAGCAGTAACACTTTCCCCCGAAGT--GCATTGCTTGGTATGCATGGTTTGCCCCTCTACCACT
GCCCTCCTTGGGTCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNGGGACACTGACCATCCTAGAGATTCCTCTGCAAGCGCTTTATTCCCTTCCACCCT
CGCACGTATTTGAGCCAAGCTCGCTTACTCACTCACACAC--ACACAACGGCTCAAGTTTTTCTCTTTCATTCAAGATTC
ACTCTTCTTGCCCTCTTCCTCCTCAGATAAGCTGTGTGGTAGGCTACTGGCTACTAGTAGGACTGGAGTAGGGTCGTAGT
ATTTGGTTCTTCTTCCCCCTTTGCTTGGGAAGCCGGTAAGCTCGCCACGGCATTA------------------CCAGCCC
CTCCTCTGCCTGCCCTCCT---CACTCGCAGAGAGAAGAGAAGAG----GAGGAGAGAATCCACATTTTGTTCCCATCCT
CATCAATCCTCTCCCCCTCTT--CTTTCCATCAAATCACAATCTTTGTTTATAGGGTGCATGTAGCCCAACAGTGGCCGC
ATTGTCTCTACCCCCTCCCTCTTCTTC-CTTCCTTCCTTGGCCCCCTCCCAACCCGCGCGCTCCCGAGCAACC-------
TGCAGCTTCGACCCTGGGCTGCTCTGCTTGCTGCATGACCGCTGTGCTCCCCTGAGCTGAGGA-------AGGAAGGAAG
GGAACAATGAGAGATGGCTGCAACACCACCAAGAAGAGCAAGGTACCGCCCTCCCATCCCTCTGTCTTCTTCCTCCTGAT
TGCTCTGTTTCCCTGTGCCTGAATGCGGTTCGGTTGCTGTGGCGTGTAGCTGTCGTGGTCCAAGAGCCTGGTCAGGAAGT
GGTTCAACATCAGGAGCAAGGCCCACGACTTCCACGCCGACGACGCCGCCGCGGCCTCCGGGAGGAGAGGCGGCGGCGAC
GA---TGAGGAGTGGAGGGGCAGCAGCTTCGCCAGGAACGAGCCGGCCAGCGCCGCCAAGAAGAGCCGGACGGAGAGGCC
GTCCAGGCGGAGCCGCGAGCACTCTAGGCGGGGCAAGATCGACCTCGACGCCGCCGAGGCCACCGTCACCATGGACTACA
GGTTGCTCCGCCGC--------CCGCCCCTGCATTCGCATTACATAATTCCATCTTCGTCTCCGCTCT----CCTGTGTG
TGTGGCCTT---GTTAGTTAAAAAAAGAACGAAACTGCCTGCAGGATCTTCGTTGCTACGTGGAATGTGGGCGGCCGATC
CCCTCCCGGCGGCATGGGCCTCGAGGACTGGCTCCACGCCGCGCCGCCCGCCGACATCTACGTCCTCGGGTACGTGTCCC
CGGATTTCTCCGTGCCGGATTCCTCAATGCTGCGGCTCGGGCTGACAATTTCGGTGCCGCCGTGGTGTTCGTCCAAAGGT
TCCAAGAGATCGTGCCGCTGAACGCCGGCAATGTGCTGGGCACGGAGGACAACGGGCCGGCGAGGAAGTGGGTGTCGCTG
ATCAGGAGGACGCTGAACGACCTGCCGGGCGCCGGCAGCGGCAGCGGCAACGGGAGCTTCCGGACGCCGTCGCCGGCGCC
GCCGGAACCGGTGGCGGAGGCGGACGACGACTTCGAGGGGGCGAGGCACCAGACCAACAACGCGGCCTTCTTCCACCGCC
GGTCCTTCCACAGCCGGAGCCTGCGGATGGAGGGCGACGCCCTGGCGCCGCAGCCCAGGCTGGAGCGCCGGTACAGCGTC
TGCGACCGCGCGATCTACGGCTCCCGCCGGCCCAGCGACTACGAGGCGCACTGCCGGTGGGGCGGCTCGTCGGACGACGA
CAACAACACCGGGGAGTCGCCCAGCACGGTGTACTCGCCCATGTCTTACGGGTACGGCCACGCGCCGTCCCTGGACGACG
GCCATAGGCCAGCTTCTGGTCACACTAGGTACGATTCAAGTTCCATGCCATGTACTCTGTCAACACATGCTATTTTTAAT
GGAGACAAAGTACATTATGGTCTCATAAATAGATGTGGTGGGTAATCTGTGTTGTGATCCGTGTTGCAATCTGATGTTCT
TCAGATATTGCCTGGTTGCAAGCAAGCAAATGGTGGGGTTGTTTCTGATGATTTGGGCTCGGAAGGACATTAGGGATGAC
ATCAGAAATCTCAAGGTTTCTTGTGTTGGCAGAGGATTGATGGGCTACCTTGGGAACAAGGTTGGTCACTGTTCCTACCA
CAAATGCTATGTGGTTATTATGATTTTTGCAATAATGTTTTGCATTTTATGAATTGATCACAAACAAGAGGCATTGTTAG
CTTAGATATAGTATTCAACCGGCAAAGGATTTGTTTTCCAGGGTTCGATTTCGATTAGCATGACATTGCACCAAACAAGC
TTCTGCTTCGTCTGCAGCCACCTGACGTCGGGGCAGAAGGAAGGCGACGAGATGCGGAGGAACTCAGATGTGCTTGAGAT
CCTCAGGAAGACCAGGTTCCCAATGGTTTACGGGCAGTATGAGCGCTCACCGGAAACTATCTTAGAGCATGAGTAAGCAA
GCACAGAACCTTGGAATTGTCCCCTAAAGCTTGTTTTCATGTGCATTTGGTGCAATATTGGGGCCCTTAACGCGCCTTTT
CTTTCAGTCGAATCATCTGGCTCGGGGACCTAAATTACCGAATCGCACTTTCCTATCGGTCAGTGAAGGCCCTGGTGGAG
ATGCGCAATTGGAAAGCATTGCTGGAGAAGGATCAGGTGAGAGCTTGCAAACCTTCTTGAGCACAATTTGTGTATGTGTG
GTGTGTACCGTTGGGATCCCCGGAAAGCTGTAAAATTGTTGTGTCACAGGCAATCAGTGCTTTTGTCTTGTCATTCTTTT
ACTTTACCATGTTGCAACATTACTAATCGGTCGGTAAAAGCCGAGGAGCTCTTGTTGTTCTCATTATGAAAATGATTACC
AGACATTGTAGTAGTATGATCTCATTGACATGTCAACTTGACACTTTCAGCTAAGGATTGAACAAAGAGGTGGGCGGGTG
TTTGCCGGGTGGAACGAGGGGAGGATATACTTCCCACCGACATACAAATACTCGACCAATTCCGACAAGTATGCCGGGGA
AGACATGAACCAGAAGGAAAAGAGGAGAACTCCTGCATGGTAC-ATTATATTACACTAATGTGCCGGATATTTGCCAGAT
TTTGTACAGTTCAAAGTGAACTTAGTGATCTTGTCGTGCAGGTGCGATCGCATTTTGTGGTATGGAAGGGGCCTAGGTCA
ACTATCATACGTTCGAGGCGAGTCTCGGTTCTCAGATCATAGGCCAGTCTACAGCGTATTCAGTGCGGAGGTGGAGTCGA
TCAACCACAGCCGAATTCAAAAAATGAGTTGTTCAAGCTCGCAGTTGGACATCGGAGAGCTACTGCCCTACTCTTACGGA
TACACCGACATCAACCCGTATGGCTACACCGACCTAAATTTCTACTGAAAGGGTCCATGAACTTTGGGAAAACACCCAGT
GTTCAGTCATATAACTTGTGATGACAAGGTAGGGTTTGGAGGGTGGTTTGAGTTAGCAGTTAAATGTATGTTCTTCACAG
ATATTAATACTCTTTCCTATGTCAGGCTG-----------GCGAGAACAGGGGCAATTGGACATAAATGCAAGCTTCTGA
ATTTCCGATAAATCGGTGAATGGCATTCGTATGTCTTGATCAATACAGTTAGTTTGCTAAGCACAAAGAGCTGACTGAAT
TTGTCACGATCAGAGTCTTGCACATTGGATACTTTCAGAGAAGCAGCAAGTGCTTGGCTAGTTTCACAGGATCCAAA-TA
ATTCAGTACAGAATACAGGTATGCTCCGGTTGATTTACAGTTTTTATGGTGAACAATACGTCTAATGAACTACTGATCCT
AACCAGTC--CTCTGTTTTGCAGGTGAGGACAGCGGTCTCCGAACCACGCACAAGATACTCTAAAGACTGCAAGCCAGTG
ACCACGAAGACTCAAATTATTTCATTTTACTGAATTCAAACTTCAAAGATAGCACTAACAGGGAACCCAGATGACGCACC
GAGATGGTCTGTTTCCATATGAGACAGTACGACGATCCAACCATATGCCCAGGAGACCATGGCCGGCCACCCCAGCAAAG
ATAGATACTGCTACTGATGGCATCGGAAGTAGTGCACCAGATTATTTTCTCCCCTTCTTCATATGTGCACATTGTATAGC
AACATTGTTGATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT----------------------CCCCCTGTTTCA
GACAGCAACAACAAGCAGTAGCA-----------------GTAGTCCTTTGCACAGTCTACACTCCTCTGCGTGCAGTTT
ATAAAAGCTTGGGGAAGAAAGAAA-GAAAGAAGGAGCGGGGGC-CATGAATGAATGCCTGCA------TTGCATTGCTCC
TCA-T-ATCATCTATCTCATCTCACCTC-----CATGGATGGATGGGAAAGGGGCGCAGCGCATAGATAGGGAGGG
>chr4B_9
--------TGGCATGGCAGCAGTAACACTTTCCCCTCGAAGGGGCATTGCTTGGTATGCATGGTTTGCCCCTCTACCACT
GCCCTCCTTGGGTCTTGCTAGGGTAGCGAGCAAAAGCAGAGAGAGAGAGGGAGAGAGAGAGAGAGA--------------
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-------------------------GAGAGACTGACCATCCTA-AGATTCCTCTGCGAGCGCTTTATTCCCTTCCACCCT
CGCACGTATTTGAGCCAAGCTCGCTCACTCACACACAACACAACACAACGGCTCAAGTTTTTCTCTTTCATTCAAGATTC
ACTCCTCTTGCCCTCTTCCTCCTCAGATAAGCTGTGTGGTAGGCTACTGGCTACTAGTAGGAGAGGAGTAGGATCGTA--
-TTTGGTTCTTCTTCTCCCTTTGCTTGGGAAGCCGGTAAGCTAGCCACGGCATCAGTGTTGCCAGCCAGCCAGCCAGCCC
CTCCCCTGCCCGTCCTCACTCGCACTCGCAGAGAGAAGAGAAGAGAAGAGAGGAGAGAATCCACATTTTGTTCTCATCCT
CATCAATCCTCTATCTCTCTTTCCTTTCCATCAAATCACAATCTTTGTTTATAGAGTGTATGTAGCCCAACAGTGGCCGC
ATTGTCTCTACTCCCTCCCTCTTCTTC-CTTCCTTCCTTGGCCCCCTCCCAACT----CGCTCCCGAGCAACCTGCAGGC
TGCAGCTTCGACCCTGGGCTGCTC-----GCTGCATGAGCGCTGTGCTCCCCTGAGCTGAGCCTGCGCTGAGCAAGGAAA
GGAACAATGAGAGATGGCTGCAACACCACCAAGAAGAGCAAGGTACCACCCTCCCATTCCTCTGTCTTCTTCCTCCTGGT
TCCTCTGTTTCCTTGTGCCTGAATGCGGTTCGGTTGCTGTGGCTTGTAGCTGTCGTGGTCCAAGAGCTTAGTGCGGAAGT
GGTTCAACATCAGGAGCAAGGCCCACGACTTCCACGCCGACGACGCCGCCGCCGCAACGGGGAGGAGAGGCGGCGGCGGC
GACGATGAGGAGTGGAGGGGCAGCAGCTTCGCCAGGAACGAGCCGACCAGCGCCGCCAAGAAGAGCCGGACGGAGCGGCC
GTCCAGGAGGAGCCGCGAGCACTCGAGGCGGGGCAAGATCGACCTCGACGCCGCCGAGGCCACCGTCACCATGGACTACA
GGTTGCTC------------CGCCGCCCCTGCATTCGCATTATATAATCT-ATCTTCGTCTCCACTCT----CCTGTCCT
CTGTGGTCTTGCGTTAATTAAAAA------GAAACTGCCTGCAGGATCTTTGTTGCTACGTGGAATGTGGGCGGCCGATC
CCCTCCCGGCGGCATGGGGCTCGAGGACTGGCTCCACGCCGCGCCGCCCGCCGACATCTACGTCCTCGGGTAGGTGTCTC
CGGGTTTACCCGTGCCGGATTTCGCAATGCTGCAGGTTGGGCTGACAATTTCGATGCCGCCGTGATGTTCGTCCAAAGGT
TCCAAGAGATCGTGCCGCTGAACGCCGGGAACGTGCTGGGCACGGAGGACAACGGGCCGGCGAGGAAGTGGGTGTCGCTG
ATCAGGAGGACGCTGAACGACCTGCCGGGCGCCAGCAGCGGCAGCGGCAACGGGAGCTTCCGGACGCCGTCGCCGGCGCC
GCCGGACCCGGTGGCGGAGGCGGACGACGACTTCGAGGGGGCGAGGCATCAGACCAACAACGCGGCCTTCTTCCACCGCC
GGTCCTTCCACAGCCGGAGCCTGCGGATGGAGGGCGACGCCCTGGCGCCGCAGCCCAGGCTGGAACGCCGGTACAGCGTC
TGTGACCGCGCGATCTACGGCTCCCGCCGGCCCAGCGACTACGAGGCGCACTGCCGGTGGGGCGGGTCGTCGGACGATGA
CAACAACACCGGGGAGTCGCCCAGCACGGTGTACTCGCCCATGTCGTACGGCTACGGCCACGCGCCGTCCTTGGACGACG
GCCATAGGCCAGCTTCTGGTCACACTAGGTACGCTTCAGGTTCCATACCATGTACTCTGTCAACACATGCTATTTTTAAT
GGAGCCAAAGTACATTATGGTCTAATAAATAGACGTGGTGAGTAATCTGTGCTGCAATCTGTTGTTT------------T
TCAGATATTGCCTGGTTGCAAGCAAGCAAATGGTGGGATTGTTTCTGATGATTTGGGCTCGGAAGGACATTAGGGATGAC
ATCCGAAATCTCAAGGTTTCTTGTGTTGGCAGAGGATTGATGGGCTACCTTGGGAACAAGGTTGGTCACTGTTCG-----
--AATG--ATGTGTTTATCATGATTTTTGCAATGC---TCTACATTGTATGAGTTGATCACAAACAAGAGGCATTGTTAG
CTTAGATATAGTATTCAACCGGCAAAGGATTTGTTTTCCAGGGTTCGATTTCGATTAGCATGACATTGCACCAAACAAGC
TTCTGCTTCGTCTGCAGCCACCTGACATCGGGGCAGAAGGAAGGCGATGAAATGCGGCGGAACTCAGATGTGCTTGAGAT
CCTCAGGAAGACCAGGTTCCCAATGGTTTACGGGCAGTATGAGCGCTCACCGGAAACTATCTTAGAGCATGAGTAAGCAA
GCACAGAACCTTAGAATTGTCCCCTAAAGCTTGTTTTCATGTGCATTTGGTGCAATATTGGGGCCCTTAACGCGCCTTTT
CTTTCAGTCGAATCATCTGGCTCGGGGACCTAAATTACCGAATCGCACTTTCGTATCGGTCAGTGAAGGCCCTGGTGGAG
ATGCGCAATTGGAAAGCATTGCTGGAGAAAGATCAGGTGAGAGCTTGCAAACCTTCTTGATCACAATTTGTGTATGTGTG
GTGTGTACCGTTGGGATCCCTGGAAAGCTGTAAAATTGTTATGTCACAGGCAATCAGTGCTTTTGTCTTGTCATTGTTTC
ACTTTAACATGTTGCAACATTACTAATAGGTCGGCAAAAGCCGAGGAGCTCTTGTTGTTCTCATTATGAAAATGATTACC
AGACATTGTAGTAGTATGATCTCATTGACATGTCAACTTGACACTTTCAGCTAAGGATTGAACAAAGAGGCGGGCGGGTG
TTTGCCGGGTGGAACGAGGGGAGGATATACTTCCCGCCGACATACAAATACTCGACCAATTCCGACAAGTATGCTGGGGA
GGACATGAACCAGAAGGAAAAGAGGAGAACTCCTGCATGGTAC-ATTAT--TACACTAATGTGCCGGATATTTGCCAGAT
TTTGTACAGTTT-AAGTAAACTTGGTGATCTTGTTGTGCAGGTGCGATCGCATTTTGTGGTATGGAAGGGGCCTGGGTCA
ACTATCATACGTTCGAGGCGAATCTCGTTTCTCAGATCATAGGCCAGTCTACAGCGTATTCAGTGCAGAGGTGGAGTCGA
TCAACCACAGCCGAATTCAAAAAATGAGTTGTTCAAGCTCGCAGTTGGACATCGGAGAGCTACTGCCCTACTCTTACGGA
TACACCGACATCAACCCGTATGGCTACACCGACCTAAATTTCTACTGAAAGGGTCCATGATCTTTGGGAAAACACCCAGT
GTTCAGTCATGCAACTAGTGATGACAAGGTAGGGTTTGGAGGGTGGTTTGAGTTAGCAGTTAAATGTATGTTCTTCACAG
ATACTAATACTCTTTCCTATGTCAGGCTG-----------GCGAGAAC-GGGGCAATTGGACATAAATGCAAGCTTCTGA
ATTTCTGATAAATCGGTGAACGCCATTCGTATGTCTTGATCAATA---TTAGTTTGCTAAGCACAAAGAGCTGATTGTAT
TTGTCACGATCAGAGTCTTGCACATTGGATACTTTCAGAGAATCAGCAAGTGCTTGGCTAGTTTCACAGGATTCAAA-TA
ATTCAGTACAGGATACAGGTATGCTCCGGTTGATTTACAGTTTTTATGGTGAACAATACGTCCAATGAACTACTGATCCT
AACCAGTC--CTCTGTTTTGCAGGTGAGGACGGCGTTCTCCGAACCCCACACAAGATACTCTAAAGACTGCAAGCCAGTG
ACCACAAAGATTCAAATTATTTCATTTCACTGAATTCAAACTTCAAAGATAGCACTAACAAGGAACCCAGATGACGCACC
GAGATGGTCTGTTTCCATATGAGACAGTACGACGATCCAATCATATGTCCAGGAGACCATGGCCGGCCACCCCAGCAAAG
ATAGATACTGCTACTGATGGCATCGAAAATCGTGCACCAGATTATTTCCTCCCCTTCTTCATATCTGCACATTGTATAGC
AACATTGTTGATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTGATTCTCTCTCTCCCCCCCTGTTTCA
GACAGCAGCAACAAGCAGTAGCA-----------------GTAGTCCTTTGCACAGTCTACACTTCTCTGCGTGCAGTTT
ATAAAAGCTTGGGGAAGAAAGAAAAGAAAGAAAGAGAGGGGGC-CATGAATGAATGCCTGCA------TTGCTCCTCCTC
ATACT-ATCATCTATCTCATCTCCTCTCCTCTCCATGGATGGATGGGAAAGGGGCGCAGCGCATAGATAGGGAGGG
>chr4D_431
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--------------------------------TGACCATCCTA-AGATTCCACTGCAAGCGCTTTATTCCCTTCCACCCT
CGCACGTATTTGAGCCAAGCTCGCTCACTCACACAC------ACACAACGGCTCAAGTTTTTCTCTTTCATTCAAGATTC
ACTCCTCTTGCCCTCTTCCTCCTCAGATAAGCTGTGTGGTAGG---CTGGCTACTAGTAGGAGAGGAGTAGGATCGTA--
-TTTGGTTCTTCTTCTCCCTTTGCTTGGGAAGCCGGTAAGCTA-CCACTGCATCAGTGTTGCCAGCCAGCCAGCCAGCCC
CTCCCCTGCCCGTCCTCCT---CACTCGCAGAGAGAAGAGAAGAGAAGAGAGAAGAGAATCCACATTTTGTTCTCATCCT
CATCAATCCTCTATCTCTCTTTCCTTTCCATCAAATCACAATCTTTGTTTATAGAGTGTATGTAGCCCAACAGTGGCCGC
ATTGTCTCTACCCCCTCCCTCTTCTCTTCTTCCTTCCTTGGCCCCCTCCCAACT----CGCTCCCGAGCAACCTGCAGGC
TGCAGCTTCGACCCTGGGCTGCT-----TGCTGCATGACCGCTGTGCTCCCCTGAGC-----CTGAGCTGAGGACGGAAG
GGAACAATGAGAGATGGCTGCGACACCACCAAGAAGAGCAAGGTACCGCCCTCCCATCCCCCTGTCTTCTTCCTCCTGGT
TCCTCTGTTTCCCTGTGCCTGAATGCGGTTCGGTTGCTGTGGCGTGTAGCTGTCGTGGTCCAAGAGCTTGGTGCGGAAGT
GGTTCAACATCAGGAGCAAGGCCCACGACTTCCACGCCGACGACGCCGCCGCCGCCACCGGGAGGAGGGGCGACGACGAC
---------GAGTGGAGGGGCAGCAGCTTCGCCAGGAACGAGCCGACCAGCGCCGCCAAGAAGAGCCGGACGGAGCGGCC
GTCCAGGAGGAGCCGCGAGCACTCGAGGCGGGGCAAGATCGACCTCGACGCCGCCGAGGCCACCGTCACCATGGACTACA
GGTTGGTCCACCGCCGCCCGCGCCGCCCCTGCATTCGCATTATATAATTCCATCTTCCTCTCCAGTCTCCCCCCTGTGTG
TGTGGCCTT---GTTAATTAAAAAC--AACGAAACTGCCTGCAGGATCTTCGTTGCTACGTGGAATGTGGGCGGCCGATC
CCCTCCCGGCGGCATGGGCCTCGAGGACTGGCTCCACGCCGCGCCGCCCGCCGACATCTACGTCCTCGGGTACGTGTCTC
CGGATTTCCCCGTGCCGGGTTTCGCAATGCTGCGGGTCGGACTGACAATTTCGATGCCGCCGTGGTGTTCGTCCAAAGGT
TCCAAGAGATCGTGCCGCTGAACGCCGGGAACGTGCTGGGCACGGAGGACAACGGGCCGGCGAGGAAGTGGGTGTCGCTG
ATCAGGAGGACGCTGAACGACCTGCCGGGCGCCGGCAGCGGCAGCGGCAACGGGAGCTTCCGGACGCCGTCGCCGGCGCC
GCCGGACCCGGTGGCGGAGGCGGACGACGACTTCGAGGGGGCGAGGCATCAGACCAACAACGCGGCCTTCTTCCACCGCC
GGTCCTTCCACAGCCGGAGCCTGCGGATGGAGGGCGACGCCCTGGCGCCGCAGCCCAGGCTGGAGCGCCGGTACAGCGTC
TGCGACCGCGCGATCTACGGCTCCCGCCGGCCCAGCGACTACGAGGCGCACTGCCGGTGGGGCGGCTCGTCGGACGACGA
CAACAACACCGGGGAGTCGCCCAGCACGGTGTACTCGCCCATGTCGTACGGGTACGGCCACGCGCCGTCCCTGGACGACG
GCCATAGGCCAGCTTCTGGTCACACTAGGTACGGTTCAAGTTCCATACCATGTACTCTGTCAACACATGCTATTTTTAAT
GGAGCCAAAGTACATTATGGTCTGATAAATAGACGTGGTGAGTAATCTGTGTTGCAATCTGATGT------------TCT
TCAGATATTGCCTGGTTGCAAGCAAGCAAATGGTGGGATTGTTTCTGATGATTTGGGCTCGGAAGGACATTAGGGATGAC
ATCAGAAATCTCAAGGTTTCCTGTGTTGGCAGAGGATTGATGGGCTACCTTGGGAACAAGGTTGGTCACTGTTCG-----
--AATGCTATGTGGTTATCATAATTTTTGCAATGG---TTTACATTGTGTGAATTGATCACATTCAAGAGGCATTGTTAG
CTTAGAAATAGTATTCAACCGGCAAAGGATTTGTTTTCCAGGGTTCGATTTCGATTAGCATGACATTGCACCAAACAAGC
TTCTGCTTCGTCTGCAGCCACCTGACGTCGGGGCAGAAGGAAGGCGACGAGATGCGGCGCAACTCAGATGTGCTTGAGAT
CCTCAGGAAGACCAGGTTCCCAATGGTTTACGGGCAGTATGAGCGCTCACCGGAAACTATCTTAGAGCATGAGTAAGCAA
GCACAGAACCTTAGAATTGTCCCCTAAAGCTTGTTTTCATGTGCATTTGGTGCAATATCGGGGCCCTTAACGCGCCTTTT
CTTTCAGTCGAATCATCTGGCTCGGGGACCTAAATTACCGAATCGCACTTTCCTATCGGTCAGTGAAGGCCCTGGTGGAG
ATGCGCAATTGGAAAGCATTGCTGGAGAAAGATCAGGTGAGAGCTTGCAAACCTTCTTGATCACAATTTGTGTATGTGTG
GTGTGTACCGTTGGGATCCCGGGAAAGCTGTAAAATTGTTATGTCACAGGCAATCAGTGCTTTTGTCTTGTCATTGTTTC
ACTTTAACATGTTGCAACATTACTAATAGGTCGGCAAAAGCCGAGGAGCTCTTGTTGTTCTCATTATGAAAATGATTACC
AGACATTGTAGTAGTATGATCTCATTGACATGTCAACTTGACACTTTCAGCTGAGGATTGAACAAAGAGGCGGGCGGGTG
TTTGCCGGGTGGAACGAGGGGAGGATATACTTCCCGCCGACATACAAATACTCAACCAATTCTGACAAGTATGCCGGGGA
GGACATGAACCAGAAGGAAAAGAGGAGAACTCCTGCATGGTACGATTAT--TACACTAATGTGCCGGATATTTGCCAGAT
TTTGTACAGTTTAAG--AAACTTGGTGATCCTGTTGTGCAGGTGCGATCGCATTTTGTGGTATGGAAGGGGCCTAGGTCA
ACTATCATACGTTCGAGGCGAGTCTCGGTTCTCAGATCATAGGCCAGTCTACAGCGTATTCAGTGCAGAGGTGGAGTCGA
TCAACCACAGTCGAATTCAAAAAATGAGTTGTTCAAGCTCGCAGTTGGACATCGGAGAGCTACTGCCCTACTCTTACGGA
TACACCGACATCAACCCGTATGGCTACACCGACCTGAATTTCTACTGAAAGGGTCCCTGAACTTTGGGAAAACACCCAGT
GTTCAATCATGCAACTAGTGATGAGAAGGTAAGGTTTGGAGGGTGGTTTGAGTTAGCAGTTAAATGTATGTTCTTCACAG
ATACTAATACTCTTTCCTATGTCAGGCTG-----------GCGAGAACAGGGGCAATTGGACATAAATGCAAGCTTCTGA
ATTTCTGATAAATCGGTGAACGGCATTCGTATGCCTTGATCAATACAGTTAGTTTGCTAAGCACAAAGAGCTGACTGAAT
TTGTCACGATCAGAGTCTTGCACATTGGATACTTTCAGAGAAGCAGTAAGTGCTTGGCTAGTTTCACAGGATTCGAAATA
ATTCAGTACAGGATACAGGTATGCTCCGGTTGATTTACAGTTTTTATGGTGAACAATACGTCTAATGAACTACTGATCCT
AACTAGCCCTCTCTGTTTTGCAGGTGAGGACGGCGTTCTC-GAACCCCACACAAGATACTCTAAAGACTGCAAGCCAGTG
ACCTCAAAGACTCAAATTATTTCATTTCACTGAATTCAAACTTCAAAGATAGCACTAACAAGGAACCCAGATGACGCACC
GAGATGGTCTGTTTCCATATGAGACAGTACGACGATCCAATCATATGTCCAGGAGACCATGGCCGGCCACCCCAGCAAAG
ATAGATACTGCCACTGATGACATCGAAAATCGTGCACCAGATTATTTCCTCCCCT--------TCTGCACATTGTATAGC
AACATTGTTGATCCTC-----CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTT---TCTCTCTCTCTCCCCCTGTTTCA
GACAGCAACAACAAGCAGTAGCA-----------------GTAGTCCTTTGCACAGTCTACACTCCTCTGCGTGCAGTTT
ATAAAAGCTTGGGGAAGAAAGAAA-GAA--------AGGGGGC-CATGAATGAATGCCTGCA------TTGCTCCTCCTC
ATACT-ATCATCTATCTCATCTCATCTCATCTCCATGGATGGATGGGAAAGGGGCGCAGCGCATAGATAGGGAGGG
>chrUn_3774
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------------------------------------------------------------------------------GT
GTTCAGTCGTGTACCTAGTGATGAGAAGGTAGGGTTTGGAGAGTGGTTTGAGTTGGCAGTGAAATGTATGTGCTTCAGAG
ATACTAATATGTTTTCCTATGACAGGATGAACTGTTGATGGCGAGCACAGGGATAATTGGACACAAGTGTAGGCTTCTGA
TC--------AATCGGTCAGTGGCATTCACATGTCTTGATAAATA---TATTTAGTTTCTGG----------------AT
TTACCAGGATCAGAGTCTTGCACATTGGATATCTTCAGA-AAGCACCCAGTGTTTGGCTAA-TTCACAGGATTCAAA-TA
GTTGAGTACAAGGTACATGTATGTTCCATTTGATTTACAAGTTTTATGGTGAACAATACGTCTAATGAAGTACTAATCCT
AACCAGTC--CTCTGTTGATCCTCATC-----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------ATCCTC-----CTCTCTCTGTCACTC--------------------------------CCCCTGTTTTCA
GACATCGTCGACAAGTAGCAGTAGCAGCAGTGGACCAGTGGTAGTCGTTTGCACAGTCTACACTCCTCTGTATGCAACTT
ATAAAAGCTAGAGAAAGAAAGGAA-GAA--------AGGGGTGGCATGAATGAATGCCTGCATCTGCATTGCTCCTCCTC
ATATCGATCATCTATCTCATCTCCATGG------ATGGATGGATGGAAAAGGGGCGCAGCGCATAGATAGGGAGGG
>SNPs
SSSSSSSS---------------------------SSS-SS---------------------------------------
----------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSS-S--S-------------S------------------------------------
-------------------------S------S----SSS----------------------------------------
----S---------------------------------------------------------SS--------S-----SS
S--------------S--------------------------S----------S--------------------------
----S-----S-S------------------------------------------------------------S------
------------SS-S--------------------------------------S---S---------------------
-----------------------------------------------------SSSSS----------------------
------------------------SSSS---------------------------------SS-----------------
------------------------------------------------------------------------------S-
-S-----------------------------------------------------------------S----SS------
----------------------------------------------------S---S-----------------------
---------------------------------------------S-----------------------------S----
-------S----------------S-------------------------------------------------------
---------S--------------------------------S--------------------S----------------
----------------S-------SSS-----------------------------------------------------
------------------------------------------------------------------------------S-
--------S------------S-S-----------S-----------------S--------------------------
----------------------------S--S------------------------------------------------
--------------------------------------------------------------------------------
------S-----------------------------------------S-------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------S----------------------------------
---------------------------------S------------S---------------------------------
----S------------------S---------S------S-------------SS---S--SS-SSSSSSSSSSSS---
-------------------------------------S------------------------------------------
--------------------------------------------------------------------------SSSSSS
SS----------------S--------------SSSSS---S----S---------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------S----------------------
--------------------------------------------------------------------------------
------------S-------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------S------------------------------S-------------------
--------------------S-------------------S----------------------------------S---S
------S--------------------S------S---------------------------------------------
----------------------------------------------------------------------S---------
-----------------------------------S--------------------------------------------
S------------------------------------------------SS-----------------------------
-----------S-----S-----S----------S---------------------------------------------
------------------------------------------------------------------S-------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------S-----S---------------------------------------------------------------
---S----------------------------------------------------------------------------
-----S--------------------------------------------------------------------------
------------------------------------------------------------------------S-------
-----------S--------------------------------------------------------------------
-------------------------------S---S----------S-S-------------------------------
-----S---------------------S--------------------------------S-------------------
----------------------------------------S------S--------------------------------
-------------------------S--S-S----------------S----------------S---------------
---------------------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------S---S-----------------------------------SSSS-SS-
SS----------------------S---------------------------------------------------
>forward_38
------------------GCAGTAACACTTTCCCCCGA------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_1716
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------CTCGGGCTGACAATTTCGGT-------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_513
--------------------------------------------------------------------------------
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-------------GCCAAGCTCGCTTACTCACT-----------------------------------------------
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----------------------------------------------------------------------------
>reverse_2354
--------------------------------------------------------------------------------
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---------------------------------TGTGGTGGGTAATCTGTGTTGT-------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>forward_1689
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------GTACGTGTCCC
CGGATTTCT-----------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_3667
--------------------------------------------------------------------------------
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------------------------------------------------------------------GGAGGTGGAGTCGA
TCAACC--------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
>forward_2438
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------CAAGCAAGCAAATGGTGGGG------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------------
>reverse_4441
--------------------------------------------------------------------------------
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----------------------------------------CCATATGCCCAGGAGACCAT--------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------------------------------------------------
