>input_sequence_28294
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------------------------------------------GGAATCCGCCGCCGCGTCCATCGAGGAGCGCGCGCAAG
CCACCATGAAGTTCAAGGCCTCCTTCACCGACGACGGCATCTCCCTGCTCGACAAGCGTAAGCCCCAGTGCAGCGCACTC
CTCGATTCCCCTCCCTCCCCCCGTCGCAATTCGCCGAACACCTCACGCGCGCCCCGCAATTCCGTTCCCGCAGGGTTCCT
CCCGGCCATCGACAAGGTGGGCCGCGTGTGCCACGTCTACCTCACCCCCACGCACGCCATGCTCCTCCACAACCTCCTCG
GCTCCACGGGGCCCGAAGGCGACGGGCCGCAGTGCGTCGCGCAGTTCGCCAAGGACCTCCTCTTCCGCGAGTACAACGTG
TCGTCGCGGGACGGCAACCGCGTCGCCTTCTCCGTCGACGTCGCGCTGCTCCATCGCGCCATCCGTAGCGCGCTCGCCGT
CCACGCGCAGTCGCCGGCTGACGGGGACGCCCCCGCGGCGATTCAGGTCAAGCTCGTCAACAAGCAGACCCCCGGGTCCC
GTTCTGCTGCCCCGTTCCTCACGTTCGAGACCAAGGGCGCTCGCTCCGCCGTCGTGCAGGACGTCCCCATCTCGAAGCCA
CTGTCACGCTCCGATGTTGCGCGCTTGCAGGATGCGCTTGACGCCGCCCAAGAGCTTCCTGAGGTGTGGTGCTCTCACAT
GGCATTTTCCAGTTTCTTATCATTCATCAGTAAAAAAATTCTCCTATTTGTATACCCGATTGAATGTTTTCACAACATAA
TGTACTCTAGCTGTCCAAATGCGAAACGAATTAATCAAATGGAAGCAGGTTGTGGCTATGAAACTTCTGATGGCTTAGTT
GTGATGCTGGACTGCAGAAACAAAATTAGGTACCAA--------TTCATACAGGCTGAGTCATAGAACTAGTAATGGCCT
GGATCCATCCTCCGAACCACATTTTGTTTGTTGAACCCGTGAACTTGGTATTCACATAATTTGCCAGTAGTAAACATAAT
TTTAGCTTTAACATGATGAAGTTTGATCATGTATTCGCGTCTCATTATTTGAAGCTGT-TTTAAAGGTCCAATCAATGTA
AATCTGAAGCACAGAACCACTCTTAAATTGTTGTACCAAAAAATCCTCAAGATATCCATGTTCCACCAAGATACA-----
---GCACAATATATCCATTTAATAATAATCAACAAATAATTAAAATCTCAAATGTAGAAATATAAAAAATATGAATCTGT
GAATGAT---TTCACATAATTTACTGCTAGTAAAGATGTTTAGTTTTTAGACAGTAAAATTTGATTGTGTCTCATTATTT
GAAGCACTGATCTAGACGTCTAGTTCATTTTGATTGATGTGGATATTCCTGTCTTGCAATGTTATTACCTTTCGGAAATT
ACTAAAATGATCTATCTGCGAGCAAGAAACTGGA----------TTTATACTAACAATAGTCAACAAATGATTACAGAAG
TATAAAATGTAAAAATAGCAATGATGCCTATTGAAC---AGTTCTTATTAGTTCTCGCAGTTCAGATGTTCTTTTTAATG
CTAAGTATTTTTCGTCGCTGAAATATCTGTATCTACTCAGATGTCTGTACTGCTTTTCATCTTAAATGTATCTTCAACTT
AGATGATTGTGAGAAGAAATTTATCTTACTGATGTTCTATGCTTTTTC-------------------------CATACTC
GCTTGGTGTTATCTTTCTACTGTCAGCTGCTTATTAGAAGAAATTTATCTTTCTGCAGACTCTGGTCCAGGTTCCAGATC
TGCAACAGTTACAGAACCTGGTGGATCGTCTAAAAAACATTGGTGATCTGCTGTCTGTAACTGTTACCCAATATGGTGAT
CTCCATCTACAAGTTTCAACTTCTCTTGTTACCGTTGGTTCAGAATTCAAAAGGCTTCGGATTCTTGGTGCTCGTGGTAA
ACTATGGCCGCTGGGAGTTGTAATCAGTATTCAGCATTAGCTTCCTTAAATTCCAAAGTA--------------------
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----------------------------------------------------------------------GGTGTCATTA
GTGCTCAAATCACTTCACTTTTGTATAACGATGTTTTCTATTTCAGCAAATGCACCTGTTGTTGATCAAAATGTGAGTGC
TACCATTCGTATGGAAATGGCGGTTGAGAGAGGCGAAGCACTGTCAGTGGTATTGCTCCTAAGCTCCATTTATTTATTCA
TCATTTTATTCTTTTCATGTCAGATGTTCACAGGTGTCTGTTATTCTATTTTCTTGCAGCAAGTGAGTATGAAGCACCTA
GTTAAGAGCCTACAATGTCATTTGGCCAAGCCAGATTGTACCTTCTATGGTTTGTTTTTCAGCCGCCTCTTT--------
----------------------AAACCTGTTGAAAAATAATCTAAATTTATATTAACTATTGCCTTGATTTTTTGTATAG
GTATTGCTCCCAATGGTGCTTGCTTGACAGTGATATTCCAGTACTTCATTCCAGGAACACGGTTGACGGACAAATCCATT
AGCTTTTACTGTAGGCTTCCAGTCCTTGACCCTGGCACCAGCTAAAGTAAAC----------------------------
---------------------------------------------------------TATATCACAGCATGGTACTTACT
TGCTTTTATTATCAGTAGATTAGGTTAGGTAACATTATCTAGCTGGTGTGCCTTTAGTTTTATGACTTGTTTGTGGCTTT
CATATATATTAACTTGATGTCTTGC-----------------------------------------------------GT
TGGTGACATTCGGGTGTGGGTACCTCAATATCGACCCTGAAAAATACCTGAATCGTTTTGATCTACAAAAATGTTGTGCT
AGTTTCTTTGTTCCAGATTATCACTTGCAGTTGCATGCACCCCTTTTCCACTTCAATATAAATTATTTGATGTTTT----
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>chr2A_1_TraesCS2A01G374000
AAACC-ATCATATTCTTCGATCACCACCAGAGCCCGTCTGAATAACCATGGACCTCCCTCCATTATTTTCCTCCAATCCC
CTAGGCAGTGACACTGAACAAGAAACAAGTTTGGCCCCTTAATGTTGAAGGTGACCCCTTGCGCCGCCGACCACGCATTG
CGCATCTGAGACAAAAGCTCCGCGTGACTAAACGGCTTTGTGGTATGAACACGGAACAAGGCGAGCCAGCGTACATCCTT
AATCAGATCATCTACTTCTTCCGAGAAATCAAGGTCTTCTTCCTCCTTCCCATGCAGCCTCATCCCTGCAAACTGACCCT
CAAGATCCTGATCGCGAAGGTCGCCATACTCCTCTTCCTCTCCGTCCGGCAAGTCCCCCTTCTGCGAGTCCCGCTCCTCT
CCTTCCCTTCCCTTCGATGCATCCTCCACCCTACTCCCTCGTCCCCGCCTTCCTCCTCCAGATCCAATCTCATCCTCCAT
CGTATGCACCACATCCACCGCCGCCAGAACTTCCTCCGCACCCCCCGTCTCCTGAGATGTTGAATCCGCCATGCAATCGC
CTGCGCACGACGTGCAGAGGTAGATCTCGGTGAGTACCGGAAAAAAGCCGGTGAT-CTACCGAGGTTTAACGTGGACTCT
GGCTAGATCGCCAGAGGAAGAGGTGGAACCCTAGAGAAACCCTAGGGGAATCACGCACACGGAGCAGACGCCGGTTTGAC
ACGGAGCAGACGCCTTGAGACAAGCTATTCTCAACTCAGGTCCGCTGTAAAATTTCCCTCGGAATTAAACCCATCTCTGA
ATAGCATAGCCCAGCCCACTTTGTTGAAAAAGTACGAAGGCACAAGGCCCACAGTTTTCTAGAAGAGGCGAGCCGAAAGT
GTAAGGCCCTGCTACGCGGGAAGCATCCAAAGGAGCGCCAAAAAACCAGAAGAGTCGAAGACACGGCTGCGCGGCGCACC
CCCACCGCCAGTCCCTCGCCGCCAGCCGAGGAGACGAAGGCCGGAATCCGCCGCCGCGTCCATCGAGGAGCGCGCGCAAG
CCACCATGAAGTTCAAGGCCTCCTTCACCGACGACGGCATCTCCCTGCTCGACAAGCGTAAGCCCCAGTGCAGCGCACTC
CTCGATTCCCCTCCCTCCCCCCGTCGCAATTCGCCGAACACCTCACGCGCGCCCCGCAATTCCGTTCCCGCAGGGTTCCT
CCCGGCCATCGACAAGGTGGGCCGCGTGTGCCACGTCTACCTCACCCCCACGCACGCCATGCTCCTCCACAACCTCCTCG
GCTCCACGGGGCCCGAAGGCGACGGGCCGCAGTGCGTCGCGCAGTTCGCCAAGGACCTCCTCTTCCGCGAGTACAACGTG
TCGTCGCGGGACGGCAACCGCGTCGCCTTCTCCGTCGACGTCGCGCTGCTCCATCGCGCCATCCGTAGCGCGCTCGCCGT
CCACGCGCAGTCGCCGGCTGACGGGGACGCCCCCGCGGCGATTCAGGTCAAGCTCGTCAACAAGCAGACCCCCGGGTCCC
GTTCTGCTGCCCCGTTCCTCACGTTCGAGACCAAGGGCGCTCGCTCCGCCGTCGTGCAGGACGTCCCCATCTCGAAGCCA
CTGTCACGCTCCGATGTTGCGCGCTTGCAGGATGCGCTTGACGCCGCCCAAGAGCTTCCTGAGGTGTGGTGCTCTCACAT
GGCATTTTCCAGTTTCTTATCATTCATCAGTAAAAAAATTCTCCTATTTGTATACCCGATTGAATGTTTTCACAACATAA
TGTACTCTAGCTGTCCAAATGCGAAACGAATTAATCAAATGGAAGCAGGTTGTGGCTATGAAACTTCTGATGGCTTAGTT
GTGATGCTGGACTGCAGAAACAAAATTAGGTACCAA--------TTCATACAGGCTGAGTCATAGAACTAGTAATGGCCT
GGATCCATCCTCCGAACCACATTTTGTTTGTTGAACCCGTGAACTTGGTATTCACATAATTTGCCAGTAGTAAACATAAT
TTTAGCTTTAACATGATGAAGTTTGATCATGTATTCGCGTCTCATTATTTGAAGCTGT-TTTAAAGGTCCAATCAATGTA
AATCTGAAGCACAGAACCACTCTTAAATTGTTGTACCAAAAAATCCTCAAGATATCCATGTTCCACCAAGATACA-----
---GCACAATATATCCATTTAATAATAATCAACAAATAATTAAAATCTCAAATGTAGAAATATAAAAAATATGAATCTGT
GAATGAT---TTCACATAATTTACTGCTAGTAAAGATGTTTAGTTTTTAGACAGTAAAATTTGATTGTGTCTCATTATTT
GAAGCACTGATCTAGACGTCTAGTTCATTTTGATTGATGTGGATATTCCTGTCTTGCAATGTTATTACCTTTCGGAAATT
ACTAAAATGATCTATCTGCGAGCAAGAAACTGGA----------TTTATACTAACAATAGTCAACAAATGATTACAGAAG
TATAAAATGTAAAAATAGCAATGATGCCTATTGAAC---AGTTCTTATTAGTTCTCGCAGTTCAGATGTTCTTTTTAATG
CTAAGTATTTTTCGTCGCTGAAATATCTGTATCTACTCAGATGTCTGTACTGCTTTTCATCTTAAATGTATCTTCAACTT
AGATGATTGTGAGAAGAAATTTATCTTACTGATGTTCTATGCTTTTTC-------------------------CATACTC
GCTTGGTGTTATCTTTCTACTGTCAGCTGCTTATTAGAAGAAATTTATCTTTCTGCAGACTCTGGTCCAGGTTCCAGATC
TGCAACAGTTACAGAACCTGGTGGATCGTCTAAAAAACATTGGTGATCTGCTGTCTGTAACTGTTACCCAATATGGTGAT
CTCCATCTACAAGTTTCAACTTCTCTTGTTACCGTTGGTTCAGAATTCAAAAGGCTTCGGATTCTTGGTGCTCGTGGTAA
ACTATGGCCGCTGGGAGTTGTAATCAGTATTCAGCATTAGCTTCCTTAAATTCCAAAGTA--------------------
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----------------------------------------------------------------------GGTGTCATTA
GTGCTCAAATCACTTCACTTTTGTATAACGATGTTTTCTATTTCAGCAAATGCACCTGTTGTTGATCAAAATGTGAGTGC
TACCATTCGTATGGAAATGGCGGTTGAGAGAGGCGAAGCACTGTCAGTGGTATTGCTCCTAAGCTCCATTTATTTATTCA
TCATTTTATTCTTTTCATGTCAGATGTTCACAGGTGTCTGTTATTCTATTTTCTTGCAGCAAGTGAGTATGAAGCACCTA
GTTAAGAGCCTACAATGTCATTTGGCCAAGCCAGATTGTACCTTCTATGGTTTGTTTTTCAGCCGCCTCTTT--------
----------------------AAACCTGTTGAAAAATAATCTAAATTTATATTAACTATTGCCTTGATTTTTTGTATAG
GTATTGCTCCCAATGGTGCTTGCTTGACAGTGATATTCCAGTACTTCATTCCAGGAACACGGTTGACGGACAAATCCATT
AGCTTTTACTGTAGGCTTCCAGTCCTTGACCCTGGCACCAGCTAAAGTAAAC----------------------------
---------------------------------------------------------TATATCACAGCATGGTACTTACT
TGCTTTTATTATCAGTAGATTAGGTTAGGTAACATTATCTAGCTGGTGTGCCTTTAGTTTTATGACTTGTTTGTGGCTTT
CATATATATTAACTTGATGTCTTGC-----------------------------------------------------GT
TGGTGACATTCGGGTGTGGGTACCTCAATATCGACCCTGAAAAATACCTGAATCGTTTTGATCTACAAAAATGTTGTGCT
AGTTTCTTTGTTCCAGATTATCACTTGCAGTTGCATGCACCCCTTTTCCACTTCAATATAAATTATTTGATGTTTTTTGT
CTACATCAGTACTACTA-TTCCTAGTTATATTCCGTGCTGCTCTGAAGGATTATCTCTACCAAGG-----CAACTGCTAA
GAAAAGTGACTCTTATGATAGAAGTGTTCGAAGCAATTCTCACTA-----------------------------------
---------------AATTTAGGTA-TGCTTTGAATAAAATTAGGACACCACCAGATAGAAAGTGCATAACGCCCAAGAA
AACCCAGCTGGCCACGAAATTAGGCCATCCTTTATATATGGATTCAGATTTCTGGTATGG-------CTCTTAAGCAAGA
TATGCGAATCTAGCTTTTCGTTCCATGGGATCTATTTGGACTAACTGCGCTTCATCAAACCTCCAGGTCCCTCTTAAATG
AAACCACCAGTTTCTCCAATGTTTATATCCTGCTGGCAGATTTTCTTACGAGCACATGCACATGTATGTCTCACCCATAA
CGTTTCCCTGCATCGCACATGACATCTTCTCTGTTGCTTATTTACTCCTCTCGTTGCTTCTA----TCACCATGCCATTT
GTTTTTGAGTTGGGTGG---AAGGTCTGCTCATTCATTCTACTCCCTCCGTAAAGAAATATAAGAGCGTTTAGATCGCTA
AAGTAGTGATCTAAACGCTCTTATATTTCTTTACAGAGGGAGTAACTTCTAAGGATGAAGATATTTTAGAAG--------
TTACAACACCTGTTCTAGATGAATTCAGCAAGTATCGTAAAAA--------GAAAACATGGTCTCATTCAGGGAAAACAC
AGTAAACACACCACCAGATGCCACTGCAATCATACTATCCATGGCATTTAACGTCATAGTGACTATCTGACCCACACTTC
CAATTAAGATTGATCGTCTATGGAGTAT---TACTAACCCCTTTTGACTGTTTGGAAGTGCAAAA-TATACTCTGTTAGA
ATTCCCTCTGATGTATGCATGC-CAAAAC-GGATCTGGGACAT-TTTTAGAGGAAACAAAGAGAGGGACCATTTTATTTA
GATGAAAGCGACAATTGTTAGTGGAGATGTGATACCAGGGGCACACACGT
>chr2B_1
AAACC-ATCATATTCCTCGATCACCACCGGAGCCCTTCTGAATAACCATGGTCCTCCCTCCATTATCTTCCTCCAATCCC
CCAAGCAGTGACACTGGACAAGAAACAGGTTCGACCCCTTGATATTGAAAGTGACCCCTTGCGCCGCCGACCACGCATTG
CGCATCTGAGACAAGAGCGCCGCATGACTGAACGGCTTTGTAGTATGAACGCGCAACAAGGCGAGCCAGCGCACATCCTT
GATTAGATCATCTACTTCCTCTGAGAAATCCAGGCCTTCTTCCTCCTTCCCATGCAGCTTCAACCCTGCAAACTGACCCT
CAAGATCATGATCGTGAAAGTCGCCATACTCATCTTCCTCTCCATCCGGCAAATCCCCCTTATGCGAGCCCTGCTCCTCT
CCTTCCCTTCCCTTCGATGCATCCTCCTCCCTTCTCCCACGACCCCGCCTTCCTACCCCAGATCCGATCTCACCCTCCAC
CGTAAGCACCGCATCTACTGCCGCCAGAACTTCCTCCGTACCCCCCGTCTCCTGAGATGTTGGCTCCGCCATGCAATCAC
CTGCGCACGACGGGTAGAGGTAGAACTCGATGAGCACCAGAGAAGA-CCGGTGAT-CTACCGAGGTTTTACGTGGACTCT
GGCTAGATCGCCAGAGGAACTGGTGGAACACTAGCGAAACCCTAGGGGAA------------------------------
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>chr5D_1
AAAGCCATCATATTCCTCGATCACCACCGGATCCCTTCTAAATAACCATGGTCCTCCCTCCATAATCTTCCTCCAATCCC
CCAGACAATGACAGTGGACAAGAAAAAGGTTAGGTCCCTTAATGTTGAAGGTGACCCCTTGTGCCGCTGACCACGCATTG
CGCATCTGAGTCAGGAGCGCCGCATGACTAAAAGGCTTTGTGGTTTGAACGCGGAACAAAGCGAGCCAGCGAATGTCCTT
GATTAAATCTTCTACCTCTTCTGAGAAATCCAGGTCTTCCTCCTCCTTCCCGTGCAGATGCATCCCCGCAAACTGGCCCT
CTATATCATGGTCATGGAAGTCGCCGTACTCCTCCTCCCCTCTGTTCGACAGGTCCCCCTTCTGCGAGTCCTGCTCACCT
CCTTCCCTTCTCCTCGCTGCATCCTCATCCCTTCTCCCCCGATCCTGCCTTCCTCCTTTAGATCCCATCTCCCCTTCCAC
CGTGTGCACCACATCTGCCGCCGCCAGAACTTCCCTCGCACCCCCAC-CTCATGAGATGTTGATTCCACCATGCAATCGC
CTGCGCGTGACGGCCAGAGGTAGATCTCGCTGTTTACCAGCGAAAA-TCCGATGAACTACCGAGATTTGACGTGGACTCT
AGCTAGATCGCCAGAGGATAA-GTGGAACCCTAGAGAAACCCTAGGGGAA------------------------------
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>chrUn_906
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---------------------------CAAAGGAGCGCC-AAAAACCGGAAGAGTCGAAGACACGGCTGCGCGGCGCACC
-CCACCACCAGCCCCTTGCCGCCAGCCGAGGAGACGAAG-CCAGAATCCGCCGCCGCGTCCATCGAGGA----GCGCAAG
CCACCATGAAGTTCAAGGCCTCCTTCACCGACGACGGCATCTCCCTGCTCGACAAGCGTAAGCCCCAGCGCAGCACACTC
CTCAATTCCCCTCCCTCT----GTCGCAATTCACCGAACACCTCACGCGCGCCG------TCCGCTCCCGCAGGGTTCCT
TCCGGCCATCGACAAGGTGGGCCGCGTGTGCCACGTCTACCTCACCCCCACGCACGCCATGCTCCTCCACAACCTCCTCG
GCTCCACGGGGCCCGAAGGCGACGGGCCGCAGTGCGTCGCGCAGTTCGCCAAGGACCTCCTCTTCCGCGAGTACAACGTG
TCGTCGCGGGACGGCAACCGCGTCGCCTTCTCCGTCGACGTCGCGCTGCTCCATCGCGCCCTCCGTAGCGCGCTCGCTGT
CCACGCGCAGTCGCCGGCTACCGGGGACGCCCCCGCAGCGATTCAGGTCAAGCTCGTCAACAAGCAGACCCCCGGGTCCC
GTTCTGCTGCCCCGTTCCTCACGTTCGAGACCAAGGGCGCTCGCTCCGCCGTCGTGCAGGACGTGCCCATCTCGAAGCCA
CTGTCACGCTCCGATGTTGCGCGCTTGCAGGACGCACTTGACGCCGCCCAAGAGCTTCCTGAGGTGGGGAGTTCTCACAT
GGCATTTTCCAGTTTCTTATCATTCATCAGTA-AAAAATTATCCTATTTGTTTATCTGATTGAATGCTTTCACAACATAA
TCTACTCTAGCTGTCCAAATGCGAAAAGAACTAGTTAAATTGAAGCAGGTAGTGGCCATGCAACTTCTGATGGCCTAGTT
GTGATGCTGGAGTGCAGAAACAAAATTAGGTACCAATTCACAGTTTCATACAGGCTGAGCCATAAAAT--GTAATGACCT
GGATCCATCCTCCAAACAGCATTTTGTTTGTTGAGCCCCTGAACTTGATATTCACGTAATTTGCCAGTAGCAAAGATAA-
TTTATCTTTAACATGCTGAAGTTTGATCATGTATTCGCGTCTCATTATTTGAAGCACTGTTTAGAGGTCTAATCAATGTA
AATCTGATGCACAGAACCACTCTTAATTTGTTGTAAC-AAAAATCCTCAAGATATCCATGTTCCAGCAAGATACCGGCAT
ACCGCACAATATA-CCATTTAACAATAGTCAACAATTAATTAAAATATGAAATGTAGAAATATATAAAATATGAATATGG
GAATGACTTATTCACATAATTTACTGATAGCAAAGATGTT-AGTTAATAGACAGTAAAGTTTGATTGTGTCCCATTATTT
GAAGCACTGATCTAGACGTCTAGTCCATTTTAATTGATGTGGATATTCCTATCTTGCATTGTTATACCTTTGGA-AATTT
ACTAAAATTATCTATCTGCGAGCAAGAAACTGGAAAAGATGTGATTCATAGTAACATTAGTCAACAAATGGTTACAGAAG
TATAAAATGTAAAAATAGCAACGACGCTTATCGAATACTAGTTCTTATTAGTTCCTACAGTTCTACTGTTCTCTTCAATG
CTAAGTATTTTTCTT-TGCGAAATATCTGTACCTACCCAGAGGTCTGTGCTGCTTGTGATCTTGAAGATATCTTCAACTT
GGATGATTGTTAGAAGAAATTTATTTTACTGTTGTTAGCTAT-----------TAGCGGACGTTGTAGATTTTCATACTG
GGTTGGTGTTATCTTTCTACTGTCAGCTGCTTATTAGTAGAAATTTATCTTTCTGCAGACTCTGGTCCAGGTTCCAGATC
TACAACAGTTACAGAATTTGGTGGATCGTCTAAAAAACATTGGTGATCTTCTGTCTGTAACAGTTACCCAATATGGTGAT
CTCCATCTGCAAGTTTCAACTTCTCTTGTTACTCTTGGTTCAGAATTCAAAAGGCTTCGGATTCTTGGTGCTCGTGGTAA
ATTATGGCTGCTGGGAGCTGTAATCAGCATTCAGCATTAGCTTCCTTAAATTCCGAAGTACTCCCCTCCGTCCCATAATA
TAGGACGTTTTTTTTTTTTTTTTGAGAAACTCGAGTACACCAAATACTCAAGTGGGGGGAAAACACTCAGCCTGCATCAA
AGGCGTCAGTCTGTCTGGAACTCTAGCAAGGAGCTGCAGATCACCCTTCTGTCTTGCCTCTGCTGCTAATTCATGGGCCA
GTGTGTTGCACTTCCTTCCAACGTGAGTGACCTTGAAGGAAGTAAAACTCTCGGAGACCTCCATGATATCCCGTAGCACA
CCAAAACAAGGAGATAGATTCAGGGAGCCCTTTTTAAGTTCATTAACTAACGCCATGCAATCCACCTCTAGCACCATTGG
CCCACTGTATATTCCTGCCAGGGCCTGCATCCCAACCAAAGCTGCTCTAGCCTCTGCTTCCTCCACACTTGCCGCGCTGC
CAATCTGTTTTCCAACTGATATGAGCACCAGGCCTCGACAGTCCCTCGCAGCTGCTCCCGCCCAGCATAGGCCACTGTCT
GGCAGATAAGTTGCGTCAGAGTTTAATTTTACTGCACCTTGATCTGGAACAGTCCATTTCATTAATTTCTGATCATCACT
CTGCACTTCAGTGTTGGCACAGGGCCACCTCTCTTTGCCAGCCTCCGAAGAGGGGTATGTACTGGTTCTTGCCAACTGTA
TTTCATCCTCGTACTTCAGGAGAAATTGGACAGAATGGCCAATTGATTCCTTGCCTTTTCCATGAACACAATCACCACGC
AGATGCCATCCCCTCCAAAGAAGCATCAACACCCTCGCCCTCACATCCACTGATGTTGTCGCTAATAGCAGTTGCAGCCA
GTCCGGGCCCGTGTACTGGAAAGAGTTCTCGGGCGGGAGTTCCCATTCTTTCCTCATTTCGTGTCTGAGAGCACGACTTT
TAGTACATGATACCACCGCATGGAATTCGTCTTCCTCGCCACAACCACAGATGTTGCAGGTGGCATCCAGCTCTAAGGTC
CTCCTCCACTTGTTCTTCTTCGTGGCTAGCGTGTTGGTGGCAACTCGCCAGCCAAATTTTTTCACTTTTGGTGGAACATT
CGACTTCCAAATGAGGTCCCAGATGCTCCTATCGTCAGGATCATTTGACGAGCTAGATGGGGACTGTCGGGTCTGCCCAT
GTGTTGCAGCGGCCAGTTTATATGCACTTCTTACTGAGAAAACCCCGTTTCTTTCGTAGTGCCAAGCAATACAATCTTCT
GCATCAGACCTTGGAATGGATAATTTGCATATTTCATCTGCATCAAAGGGGTGGAAAATTTGCCTTATAAGCTCCACATT
CCACTCTCTACTCTGGTTGCATGAGCTGGTTCACCCACCGCAGTCTTGACCTCCTAACAAAAGATGCAGTCCTTAGTCCT
TCCTTCCGAGGGATCCACTGGTCTCTTTGGATTTGAATGCTTCTTCCATCCCCCACCCGCCAGATGATGCCTTTCTTTAG
GAGCTCCAACCCAACCTCAATTCCTCTCCATACCGGGGACGCGTCTGAGGCAAAAACCGTATCAAGGAGATTTCCGTGTG
GATAGTATTTTGACTTGAGCACTCTCGCACACAAACTGTCCGGATTTTGTAGTAGCCTCCACCCTTGCTTTGCAAGCAGT
GCAATGTTGAACAGGTGCATATCCCTAAAGCCAATACCACCTGCCCTTTTCGGTCGTGTCATGCGTTCCCACGACATCCA
ATGTACCTTCCTATGCCCTTCTTCATCCCCCCACCAGAAATCACGAATCATCTTCTCATATTTCTCGCAAAAGCCTTTTG
AGAGTAGGAAGACCCCCATAGTAAAGCAGGGGAGAGCCTGGACCACGGATTTGACGTGTACTTCCTTTGCTGCGTATGCC
ATAAATCTTCCTGACCAATCACTACACCTCTTACTGAATCTATCCAAGATCGGTTGGAATTTCTCGTCCTTCATCCTCCC
TTCTGGAGTTGGAAAACCCAGATACTTGCTCTCAAAGGAGGAGGAAACCACTCCCAGAACTCTCTTTATCTCTTCCCTAG
ACTCTTCCGGGCACCACTCGCTGAAAAGTAAAGAGCATTTATTTTCGCTCAGCAATTGCCCCGTACCTCGCTGGAAAGAC
GCCAACACCTTCTTCATAACCTGTGCCTGTACAACATTTGCCTTAAAGAAAATTAGGCTATCATCTGCGAAAAGAAGATT
TGAGATTCCTGGGCTGTTCCTCGCAATCTTAATAGGTGTCAGGTTGCCGTCATTTGTTTCCTTCTTCATGAGACTGACTA
AACCATCAGCAACAAAGAGGAAAAGATAGGGGCTTATTGGATCTCCTTGCATTATGGGACGGAGGGAGTAGGTGTCATTA
GTGTCCAACGCACTTCACATTTTTATATCGATGTTCTCTATTTCAGCAAATGCACCTGTCGTTGATCAAAATGTGAGTGC
TACCATTCGTATGGAAATGGCGGTTGAGAGAGGGGAAGCACTGTCAGTGGTATTGCTCCTAAGCTTCATTTATTAAATAA
TCGTTCTATTATTTTCATGTCAGATGTTCACAGGTGCTTGTTATTCTATTTTCTCGCAGCAAGTGAGCATGAAGCACCTA
GTTAAGAGCCTACAATGTCATTTGGCCAAGCCAGATTGTACCTTCTATGGTTTGTTTTTCAGCCGTTTCTGTAAACCTGT
TGAAAAATCTTTCGCAAAAGGAAAACCTGTTGAAAAATAATATAAATTCGTATTAACTATTACCTTGATTTTTTGTGTAG
GTATTGCTCCTAATGGTGCTTGCCTGACAGTGATATTCCAGTACTTCATTCCAGGAACACGGTTGACAGATAAATCCATC
AGCTTTTACTGTAGGCTTCCAGTCCTTGACCCTGGCACCAGCTAAAGTAAAC----------------------------
---------------------------------------------------------TATATCACAGCATGGTACTTGCT
TGCTTTTAGTATCAGTAGATTAGGTTTGGTAGCATTATCTAGCTGATGTACCTTTAATTTTATGACTTGTTTGTGGCTTT
GATATATATTAACTTCATGTCTTGCAATGATCTGCTTGTTCATATGGAAAATACTGGGTGCAAACTGTGAATGTTTGCGT
TGGTGACATTCTGGTGTGGGCACCTCGATATCAACCCTGAAAATACT------------------------TGTTGTGCT
AGTTTCTTTGTTCCGGATTATCACTTGCAGTTGCATGCACCCCTTTTCCACTTCAGTATAAATTATTTAATGCCTTCTGT
CCACATCAGTACTCCTACTTCGTAGTTCTATTCTGTTCTGCTCTGAAGGATTAATCCCTATCAAGGCTCACAACTGCTAA
GAAT-GTGACTCTTATGATAGAAGCTTGCAAAGCAATTCTTACTAAATTTATTTATTTTATTTTTTGATAAAAATTTCTT
ACCAAATTCTTACTAAATTTGGCTATTGCTACGGGTAAAATTAGGACACAGCCAGCTAGTAC-TGCATAACGCCCAAGAA
AACCCAGCTGGCCCTGAAATTAGGCAATGCTTTATATATGGATTCAAATTTTCAAACTTCTGGTATACTCTTAATCAAGA
TGTGTGAATTTGGGTTTTCATTCCATGGGATCTATTTGGACCAACTACGCTTCTTCAAACCTCCAGATCCATCTTAAATG
AAACCACCAGTTTCTCCAATGTTTATATCCTGCTGGCAGATTTTCTTATGAGCACATGCA------TGTCTCACCCACAA
CGG-TCCCTGCATCGCACATGACATCTACTCTGTTGCTTATTTACTCCTCTCGTTGCTTCTA----TCACCATGCCATTT
GTTTCTTTATTGGGTGGAAGAAGGTCCGCTCATACAT-------------------------------------------
-----------------------------------------------TCTAAGGATGAATAAACTTTAGAAG--------
TTACAACACCTGTTCTAGATGAACTCAGTCAGTTCCGTAAAGA--------AAAAAGATGGTCTCATTCAGAGAAAACAC
AGTAAACATACTACTAGATGCCACTACAA-------------------------CATAATGACCATCTGACCAACACTTC
CAATCAGGTTT-ATCGTCTATGGAGTATTAGTACTAACCCCCTTTGACTGTTTGGAAATGCAAAAATATATTCTATTATG
ATTCCCTCTGATGTATTCATGCTCAAAAAGGGATCTGGTACATATTTTAGAGGAAACAAAGATGGTAACCATTTTATTTT
GATGAAAGTGACAATTGTTAGTGAAGAT----------------------
>chr2D_907
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
----------------------------AAAGGAGCGCC-AAAAACCAGAAGAGTCGAAGACACGGCTGCGCGGCGCACC
-CCACCACCAGTCCCTCGCCGCCAGCCGAGGAGACGAAG-CCGGAATCCGCCGCCGCGTCCATTGAGGA----GCGCAAG
CCGCCATGAAGTTCAAGGCCTCCTTCACCGACGACGGCATCTCCCTGCTCGACAAGCGTAAGCCCCAGCGCGGCGCACTC
CTCAATTCCCCTCCCTCCGC----CGCAATTCGCCGAACACCTAACGCGCGCCCCGCAATTCCGTCCCCGCAGGGTTCCT
CCCGGCCATCGACAAGGTGGGCCGCGTGTGCCACGTCTACCTCACCCCCACGCACGCCATGCTCCTCCACAACCTCCTCG
GCTCCACGGGGCCCGACGGCGACGGGCCGCAGTGCGTCGCGCAGTTCGCCAAGGACCTCCTCTTCCGCGAGTACAACGTG
TCGTCGCGGGACGGCAACCGCGTCGCCTTCTCCGTCGACGTCGCGCTGCTCCATCGCGCCATCCGTAGCGCGCTCGCTGT
CCACGCGCAGTCGCCGGCTGCCGGGGACGCCCCCGCGGCGATTCAGGTCAAGCTCGTCAACAAGCAGACCCCCGGGTCCC
GTTCTGCTGCCCCGTTCCTCACGTTCGAGACCAAGGGCGCTCGCTCCGCCGTCGTGCAGGACGTGCCCATCTCGAAGCCA
CTGTCACGCTCCGATGTTGCGCGCTTGCAGGACGCACTTGATGCCGCCCAAGAGCTTCCTGAGGTGGGGAGTTCTCACAT
GACATTTTCCAGTTTCTTATCATTCATCGGTA-AAAAATTATCCTATTTGTTTATCTGATTGAATGCTTTCACAACATAA
TCTACTCTAGCTGTCCAAATGCGAAAAGAACTAGTCAAATTGAAGCAGGTAGTGGCCATGCAACTTCTGATGGCTTAATT
GTGATGCTGGAGTGCGGAAACAAAATTAGGTACCAATTCACAGTTTCATACAGGCTGAGCCATAGAAT--GTAATGACCT
GGATCCATCCTCCAAACGACAATTTGTTTGTTGAGCCCCTGAACTTGATATTCACGTAATTTGCCAGTAGCAAATATAA-
TTTAGCTTTAACATGCTCAAGTTTGATCATGTATTCGCGTCTCATTATTTG--GCACTGTCTAGAGGTCTAATCAATGTA
AATCTGATGCACAGAACCACTCTTAATTTGTTGTAACGAAAAATCCTCAAGATATCCATGTTCCAGCAAGATACCACACA
-------AATATG-CCATTTAACAATAGTCAACAATTAATTAAAATATGAAATGTAGAAATATAAAAAATATGAATCTGT
GAATGACTTATTCACATAATTTACTGGTAGCAAAGATGTTTAGTTAATAGACAGTAAAGTTTGATTGTGTCCCATTATTT
GAAGCACTGATCTAGACGTCTAGTCCATTTTAATTGATGTGGATATTCCTATCTTGCATTGTTATACCTTTGGA-AATTT
ACTAAAATTATCTATCTGCAAGCAAGAAACTGGAAAAGATGTGATTCATAGTAACATTAGTCAACAAATGGTTACAGAAG
TATAAAATGTAAAAATAGCAACGATGCTTATCGAATACTAGTTCTTATTAGTTCCTACAGTTCAGCTGTTCTCTTCAATG
CTAAGTATTTTTCTTCTGCGAAATATCTGTACCTACCCAGAGGTCTGTACTGCTTGCGATCTTGAAGATATCGTCAACTT
GGATGATTGTTAGAAGAAATTTATTTTACTGCTATTAGCGAGTACTCGCTATATAGCGGACGTTGTAGATTTTCATACTG
GGTTGGTGTTATCTTTCTACTGTCAGCTGCTTATTAGTAGAAATTTATCTTTCTGCAGACTCTGGCCCAGGTTCCAGATC
TACAACAGTTACAGAACTTGGTGGATCGTCTAAAAAACATTGGTGATCTTCTGTCTGTAACTGTTACCCAATATGGTGAT
CTCCATCTGCAAGTTTCAACTTCTCTTGTTACTCTTGGTTCAGAATTCAAAAGGCTTCGGATTCTTGGTGCTCGTGGTAA
ATTATGGCTGCTGGGAGCTGTAATCAGCATTCAGCATTAGCTTCCTTAAATTCCGAAGTA--------------------
--------------------------------------------------------------------------------
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----------------------------------------------------------------------GGTGTCGTTA
GTGTTCAAAGCACTTCACTTTTTTATATCGATGTTCTCTATTTCAGCAAATGCACCTGTCGTTGATCAAAATGTGAGTGC
TACCATTCGTATGGAAATGGCGGTTGAGAGAGGGGAAGCACTGTCAGTGGTATTGCTCCTAAGCTTCATTTATTTATTCA
TCGTTCTATTATTTTCATGTCAGATGTTCACAGGTGCCTGTTATTCTATTTTCTCGCAGCAAGTGAGCATGAAGCACCTA
GTTAAGAGCCTACAATGTCATTTGGCCAAGCCAGATTGTACCTTCTATGGTTTGTTTTTCAGCCGTTTCTGTAAACCTGT
TGAAAAATCTTG-GCAAAAGAACAACCTGTTGAAAAATAATCTAAATTTGTATTAACTACTGCCTTGATTTTTTGTGCAG
GTATTGCTCCTAATGGTGCTTGCTTGACAGTGATATTCCAGTACTTCATTCCAGGAACACGGTTGACGGATAAATCCATC
AGCTTTTACTGTAGGCTTCCAGTCCTTGACCCTGGCACCAGCTAAAGTAAACTACTCCCTCCGTCCCATAATATAAGAGA
GCATTTTTGACACTACACTAGTGGAAAAAACGCTCTTATATTATGGGACGGAGGGAGTATATCACAGCATGGTACTTGCT
TGCTTTTAGTATCAGTAGATTAGGTTTGGTAGCATTATCTAGCCGATGTACCTTTAATTTTATGACTTGTTTGTGGCTTT
CATATATATTAACTTCATGTCTTGCAATGATCTGCTTGTTCATATGGAAAACATTTGGTGCAAACTGTGAATGTTTGCGT
TGGTGACATTCTGGTGTGGGCACCTCGATATCACA-CTGAAAATACT------------------------TGGTGTGCT
AGTTTCTTTGTTCCAGATTATCACTTGCAGTTGCATGCACCCCTTTTCCACTTCAATATAAACTAGTTGA----------
--------------------------------------------------------------------------------
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--------------------------------------------------
>chr2D_3873
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------------------------------------TTCTTACTA-----------------------------------
---------------AATTTGGCTATTGCTTCGAATACAATTAGGACACCGCCAGATAGTAC-TGCATAACGCCCAAGAA
AA-CCAGCTGGTCCTGAAATTAGGCAATGCTTTATATATGGATTCAAACTTCTGGTATAG-------CTCTTAATCAAGA
TGTGTGAATTTGAGTTTTCATTCCGTGGGATCTATTTGGACCAACTACGCTTCTTCAAACCTCCAGATCCATCTTAAATG
AAACCACCAGTTTCTCCAATGTTTATATCCTGCTGGCAGATTTTCTGATGAGCACATGCA------TGT-TCACCCACAG
CGGTTCCCTGCATCGCACATGACATCCTCTCTGTTGCTTATTTACTCCCCTCGTTGCTTCTACTGATCACCATGCCATTT
GTTTTTGAATTGGGTGGGAGAAGGTCCGCTCATTCAT-------------------------------------------
-----------------------------------------------TCTAAGGATGAATAAATTTTAGAAGTCACAAAC
TTACAACACCTGGTCTAGATGAATTCAGTCAGTACTCAGTTCCGTAAGAAGAAAAAGATGGTCTCATTCAGGGAAAACAC
AGTAAACACACCACTAGATGCCACTACAATCATACTATCG-TGGCATTTAACGTCATCATGACTATCCGACCAACACTTC
CAATCAAGATTGATCGTCTATGGAGTAT---TACCAACCCCTTTTGACTGTTTGGAAATGCAAAAAATTACTCTATTAGA
ATTCCCTCTGACGTATGCATGC-CAAAAAGGGATCCGGGACCA-TTTT--------------------------------
--------------------------------------------------
>SNPs
---------------S------------S------S---------------S--------------S-------------
-S--------------S----------S---S------------------------------------------------
--------------S---S----S--------------------------S--------------------S--------
S--S-----------------S--------S---------------------------S---------------------
-------S------S---S----------------------------------------------------S--------
---------------------------S----S-----S--S-----------------------S------S------S
---------------S-----------------------------------------------S----------------
------------S----------------S--------S--S----S---------------------S-----------
-------------------S------------------------------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSS------------S----------------------------------------
S-----S--------------------------------S-----------------------------SSSS-------
--------------------------------------------------------------------S-----------
---S--------------S-SS----------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------------------S-----------------------------------------------------------
----------------------------------------------------------------S---------------
--------------------------------S--S------------------------------S--S-S--------
--------------------------------S-------S----------S--S-S---------S-------------
-S------------------------S---S--S------S---------S-----S---S-------------------
-----------S-----------------------------------------------S-------SSS------S---
-------------S---S----------------S---S--------S-------S--------------S---S----S
---------------S---------------------------------------SS------S-----S----------
-------S------------------S--------S-S---------------------------S--------S-----
-------------S--------S----S-------S----------S-S-------------------------------
------S-------------------S---S--------------SS-----------S------------S--------
------------------------S------S------------------S-------S------SS-S--SSSS--S--
--------S-------------------------------------S---S-----S-------------S---------
---------------------S-----S---S---S------------------SSS--------S------S--S----
-------------S--SSS------------S----S----S-------------S-S-----S--SS------------
S---------S-------------S------S----SSS-SS-SS-SS-------------------------------S
-S-----------------------------------S------------------------------------------
-S---------------S-------------------------------S------------------------------
--------S-----------------------SS----------------------------------------------
-S------S--------S---------S--------------------------S-------------------------
--------------------------------------------------------------------------------
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---S-----S------------S----S-------S-----------------------S--------------------
---------------------------------S-------------------------------S--------------
--S--S----S-------------------------S-----------------S------------S------------
-----------------------------------------------------------------SS---S---------
-------------------------------------------------S--------------------------S---
----------S-----------------------------------------------------------S--------S
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
--------S-----------------S----S-------------S---S------S-----------------------
---------------S----------------------------------------------------------------
-----------S--------S-----S-----S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSS---------
------------------------------------------------------------------------SS--S---
-S-----------S-------S-----S-----S--S----------------SSS-SSSSS-S----------------
---SS-------------------SS-S-S----------S---------------------------------------
--------------------S-S--------S------------------S--------S-SS-----------------
-------------SS----------S--S-----------------S-----------S---------------S-----
-S--S----S-S-S-----S---------------------S----S------S------------S---S---------
------------------------------------------------S-----------SSSSSS-----------S--
--S-----------------------------------------------------------------------------
--------S-----------------S----------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS------------S-S------------------
----------------------------SS----S------S---------S----S-----------------------
--------------S----------S-------------SS-----------------S-------------S-------
----S----------------------------------------------------S----------------S-----
----------------------------S---------------------------------SS-SS------------S
--------S--------------S----SSSSSSSSSSSSSSSSSSSSSS
>forward_433
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-------------TCGATGCATCCTCCACCCTA-----------------------------------------------
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>reverse_1667
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------------------------------------------------------------------TGGTGCTCTCACAT
GGCATT--------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_819
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-------------------------------------------------------------------------------A
ATAGCATAGCCCAGCCCAC-------------------------------------------------------------
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>reverse_1801
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----------------------------------------GGAAGCAGGTTGTGGCTATG--------------------
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>forward_896
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----------------------------------------------------------------------------AAGT
GTAAGGCCCTGCTACG----------------------------------------------------------------
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>reverse_1910
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---------------------------------------------------------------------AGTAATGGCCT
GGATCCATCC----------------------------------------------------------------------
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>forward_1817
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-------------------------------------AATGGAAGCAGGTTGTGGCT-----------------------
--------------------------------------------------------------------------------
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>reverse_6096
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---------------GATGTCTTGCGTTGGTGACA---------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------
>forward_5667
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-----------------------------------------------TGGTTTGTTTTTCAGCCGCC-------------
--------------------------------------------------------------------------------
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>reverse_6798
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-----------------------------------------------------------------------------TAA
CGTTTCCCTGCATCGCA---------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------
