>input_sequence_28129
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--CCTCGGCGAAACCCTAGCCTAGCCCCGCCGAATCGCGAG---TCCCCCCGAAGCCGGAGCAAGCCGAGATGTCCCGCA
CCGGACCGATCGCCCAGGACTGGGAGCCGGTGGTCGTGCGCAAGAAGCTGCCCAACGCCGCCGCCAAGAAGGACGAGAAG
GCCGTCAACGCCGCCCGCCGCGCCGGCGTCGACATCGACATCGCCAAGAAGCGTAAGCGTCCCTCCGGGCCCCGGCCTTC
CAAACCCCTTTCTCGGAGTAGAAATAAATCGCTCGATGCGGTGGTGGATTTGGTTTGGCCGCGTAGTAGCTGGT-CGTCC
TC-GAGTAGGCGC-GGGCTTTTTCGACAGATTGGCGTGCGATGCTGCGAATCCTAGGGCGTTGGATTGAGCCTCCTTGAT
TTTTGGGCATAGGCGT-GTGGTAATCCGAATAATGTTCATGTTTCACGCGAGGGTTTTCGGTAGAATGGATTCTTTGGCC
TTTTATTCAAGGAGGG--TGAATTTTTAGGAATTTTTGGAAGAATAAATTGTCTATTTGGTTTAGACGACTAGTGCACGT
TCTTGTTTGGTTATTTGATAGTGCCAAGCACCTTATTTTTTTTTGAGA-T-TTTTTTTCTTTTACGATTCACCTGTTTGA
TGT-TGATGATGCAGCT-TTGCACTGAATCTGAGGTTATTACATACGGTTAGTCAGGTTTAATCTTTGTAGTCTGTATAT
TGCAGCAGTGGCTCATTGATTGCATCTCTGATGTGATTATGCATTCGGATTTGGTACTGCACAAGTGCACATTAAAATAT
CAACACTCTTTTGCAGCATGTAAAGTCATCAAACAGTGTTGATAAGAACCTGTGATATATTGGGGCGAGATCTGTATAAG
TAGAATGATTTTGCATTCAT------------------------------------------------------------
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ACTATTC-----------------------ACAGCAATGTTTGTCCCTT-TTTTCG-GCGATGTGTGGGTTGAGCTTGGA
TTTGAAAATTACTGTGTT-GGTAGATCCATGTTATATTGATC-TTTTCTGAATTATAATCAGAATTCTACATGACTAATA
GAAGTGTTAATTATGCTTTTAGTGCACAATGCACACCTCATGTGCCTAGTTCCTAGTGCACACCTATTGTGTTTAAGTGG
GGA--TTATATGATCCATATGTTTTAACTGTTTATTTTTGTGGATAACGGGAGTTAGTGATGTCTGTTGTCTTGGTTACC
TTCGCAATAAAGCACTTCATGCCAACATTGAACAGTACTTTCTTG-----------------------------------
----------------------CTCATGTCGGTTAAGTGGTTGCCATTGAAGAGGTTTAAGGCTTTAAGCTTGTCATGGA
ATACCTCTATCTTTTATGATGAGTTATTTTTCTAGTTTTCTTATGCATGC---------TATGGCCATCATAAATGCTTG
AACATGATCAGTATATGATATCTTGTATCATAGACGGTGCTGTAAAAGACAGGCTT-CATCATATGATCAGAATATCTAT
CTGTGCATATCTTTTGCACACTTTTGTTGAGATATA----TGAGAGTTTTATATATTGCTTTAACTTGGATGACATTGTT
GATGAATGCAGATAATGCTGGGACAAACAAAGCTGCTCATAGCACCACATCGCTCAATACAAAGAGGCTTGATGATGATA
CAGAGAATCTTGCTCGTAAGTTCCTTACACTTTTTACTTCTATATATGTTTATTTAAAAAAAGGAATAACTGCCTAAAAT
AGCTGTTTATTGTCCAATCATTTTGTTTATATGATG--------------------------TGTGTGTATGGCAATCAT
TTT-TTTATGTGATGTGTGTACG----TCTCAGTTAAATCCAATAATAATATTTGTGAAATATGGCACAGCTTTTCTCCT
TTTGGTAAAAGGAACTATACATGAGTATGCTTGTTAGTTGATCAGTTTACCTTCTTTCTCG-TGCGTTGACATGCATTT-
AGTATATATCTACTTATATA--GTAAAGCATGTTGTGCTTGCTTGAGTGTTCCACAGTATTGAGGCAACATTTATTCCTA
ATTGATCTACTATCATGGACTCATGTCTTACCCAATTGTTCGATTAATTCTTTGAGGTTTGGAATAAACATAATTTGTTG
TGGTGTACAAGTCAGTTTTTTCTTAGTTTCTACTGATATTCTCTATCTGTGGCCAATTCAACTGTTAATCACAAGGAAAA
CAA-GTTCCTCTATAGTGTACCTGTACTGTCCTTTCAGAGCAAATTTGCTAATTAGAAGCCGTGCGTATTCTGCTGCATT
TGATTTCACATTATGGGTTGTGCGTATT----------------------CTGTACTTTTAGGGTTGTGT----TGTTAA
AACTTAAGTTACATTATAGGAATGCTACTGTAGGAAATTTTACTTCCTAG------------GAATTTGAATCCTTCAAT
GGTCCTTACTTTTTCATTGTTATTAGTGAATGTCAATACAATACACA-----TCTTTTATTGCTTTGTAACCATTGGGGG
TTACCTTCAACAGATGAGCGTGTGCCGTCAGACCTGAAGAAGAGCATTATGCAGGCTAGAACGGACAAGAAGCTCACACA
GGCACAGCTTGCACAGGTATGAAC---CTTACTTCACTGCCAACCTGAAATCTGTAACATCTCTCTGCCTT-CATTCCCT
AAGACACATTGTTTTATTACCAGCTGATCAATGAGAAGCCACAAGTCATCCAGGAGTACGAGTCAGGCAAGGCTATCCCA
AACCAACAGATCATCGGCAAGCTGGAAAGGGCTCTTGGCACAAAGCTGCGAGGCAAGAAGTGAAGCTGCGTGTGCATCTG
ACAGGAGTCGAGGCTTTCAAGA---GAGCTTGGCTGGGCAAGTTTACCGCTAAATAAAGCTTGTCTACTAAA--------
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>chr3A_1_TraesCS3A01G135300
TTGGTTTCATCTCTCCTTTGTTCCTAATTTCAATTTATTTTTTCGTTGCTCAGATTTGTGAGTTGCTCGTGTGTTGTGAT
GTAGGTTTTGTTAATGCTCTCTTGTTAGATGCATGTGTTAGTTTCTCCGCAATATCTTGTCCGGTTCTA-TTTTCTGCAG
CTAGATTTTAAAAAAGTTCA--------------------CTAACTTGAGAAACGTTCGCGGGTTTGAAAAAGTTCATGA
AATTCAAAAATGTTCACTAACTTGAGAAAATTTCGTGAATTAGAAAAAGTTATCAGATTTAAAAAAATAGTTCACAAAGT
ATTAAAAAATCAACGCTAAAAATTCATGAAAGTTGAAAAAAAGTTTGTGGGATTTAAAAAACTTCACGAATTTGAGAAAA
TTTCACGCATTCAATAAAAAAATTTGTGCATTGTATGAAAGTTATGTATTTAAAAAAGTT------------------TA
TACATTGGAGAAAATCATGAAACAAGAAAACAAAAAGACCGAATATAATAAAAATATAAAAGAGACTAAATGCGGACGTG
AAAGTTTTGGGAAGCTTCATTTCACGAGCGAGTGTGCGTTGCGGTCAGCCACTAGGTCAGACTAAATGCGGACGTGAAAG
TTTTCGATTTCTCTTTCCTTTCTTTGGGCATGATTGTATTGTTGCCCCAGCCGTCACTATGAGTACGATTTCAGATGTTG
TTTGTATGGATCGTTGATTTATCCATAAAGCGGAATAAAAGCCTATTTCGAGAGCGTGCGTTGCGGAAATGAAGGAAAAA
ATGCAGTCACGAAAGAGAGAAAAAACTAAATGGGCCGGTTTCTCGAATAAGGGGGGTGCGCGGTGAACTGCGACCGAAAC
TA---AGAACAAAAAGAGAGGTCCAGGTCCGTCCGCTCCGACACGTTACCAGCCCACCAGGTTTGCGGAAAGGCCCACTC
GCGTTCACCTCAAGAGGAGTCCCGAGACCGTCGCCACCTTAACCCCGATCATTCGCACCGACCACATCCTCATCGTCTCC
AACCTCGGCGAAACCCTAGCCTAGCCCCGCCGAATCGCGAG---TCCCCCCGAAGCCGGAGCAAGCCGAGATGTCCCGCA
CCGGACCGATCGCCCAGGACTGGGAGCCGGTGGTCGTGCGCAAGAAGCTGCCCAACGCCGCCGCCAAGAAGGACGAGAAG
GCCGTCAACGCCGCCCGCCGCGCCGGCGTCGACATCGACATCGCCAAGAAGCGTAAGCGTCCCTCCGGGCCCCGGCCTTC
CAAACCCCTTTCTCGGAGTAGAAATAAATCGCTCGATGCGGTGGTGGATTTGGTTTGGCCGCGTAGTAGCTGGT-CGTCC
TC-GAGTAGGCGC-GGGCTTTTTCGACAGATTGGCGTGCGATGCTGCGAATCCTAGGGCGTTGGATTGAGCCTCCTTGAT
TTTTGGGCATAGGCGT-GTGGTAATCCGAATAATGTTCATGTTTCACGCGAGGGTTTTCGGTAGAATGGATTCTTTGGCC
TTTTATTCAAGGAGGG--TGAATTTTTAGGAATTTTTGGAAGAATAAATTGTCTATTTGGTTTAGACGACTAGTGCACGT
TCTTGTTTGGTTATTTGATAGTGCCAAGCACCTTATTTTTTTTTGAGA-T-TTTTTTTCTTTTACGATTCACCTGTTTGA
TGT-TGATGATGCAGCT-TTGCACTGAATCTGAGGTTATTACATACGGTTAGTCAGGTTTAATCTTTGTAGTCTGTATAT
TGCAGCAGTGGCTCATTGATTGCATCTCTGATGTGATTATGCATTCGGATTTGGTACTGCACAAGTGCACATTAAAATAT
CAACACTCTTTTGCAGCATGTAAAGTCATCAAACAGTGTTGATAAGAACCTGTGATATATTGGGGCGAGATCTGTATAAG
TAGAATGATTTTGCATTCAT------------------------------------------------------------
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ACTATTC-----------------------ACAGCAATGTTTGTCCCTT-TTTTCG-GCGATGTGTGGGTTGAGCTTGGA
TTTGAAAATTACTGTGTT-GGTAGATCCATGTTATATTGATC-TTTTCTGAATTATAATCAGAATTCTACATGACTAATA
GAAGTGTTAATTATGCTTTTAGTGCACAATGCACACCTCATGTGCCTAGTTCCTAGTGCACACCTATTGTGTTTAAGTGG
GGA--TTATATGATCCATATGTTTTAACTGTTTATTTTTGTGGATAACGGGAGTTAGTGATGTCTGTTGTCTTGGTTACC
TTCGCAATAAAGCACTTCATGCCAACATTGAACAGTACTTTCTTG-----------------------------------
----------------------CTCATGTCGGTTAAGTGGTTGCCATTGAAGAGGTTTAAGGCTTTAAGCTTGTCATGGA
ATACCTCTATCTTTTATGATGAGTTATTTTTCTAGTTTTCTTATGCATGC---------TATGGCCATCATAAATGCTTG
AACATGATCAGTATATGATATCTTGTATCATAGACGGTGCTGTAAAAGACAGGCTT-CATCATATGATCAGAATATCTAT
CTGTGCATATCTTTTGCACACTTTTGTTGAGATATA----TGAGAGTTTTATATATTGCTTTAACTTGGATGACATTGTT
GATGAATGCAGATAATGCTGGGACAAACAAAGCTGCTCATAGCACCACATCGCTCAATACAAAGAGGCTTGATGATGATA
CAGAGAATCTTGCTCGTAAGTTCCTTACACTTTTTACTTCTATATATGTTTATTTAAAAAAAGGAATAACTGCCTAAAAT
AGCTGTTTATTGTCCAATCATTTTGTTTATATGATG--------------------------TGTGTGTATGGCAATCAT
TTT-TTTATGTGATGTGTGTACG----TCTCAGTTAAATCCAATAATAATATTTGTGAAATATGGCACAGCTTTTCTCCT
TTTGGTAAAAGGAACTATACATGAGTATGCTTGTTAGTTGATCAGTTTACCTTCTTTCTCG-TGCGTTGACATGCATTT-
AGTATATATCTACTTATATA--GTAAAGCATGTTGTGCTTGCTTGAGTGTTCCACAGTATTGAGGCAACATTTATTCCTA
ATTGATCTACTATCATGGACTCATGTCTTACCCAATTGTTCGATTAATTCTTTGAGGTTTGGAATAAACATAATTTGTTG
TGGTGTACAAGTCAGTTTTTTCTTAGTTTCTACTGATATTCTCTATCTGTGGCCAATTCAACTGTTAATCACAAGGAAAA
CAA-GTTCCTCTATAGTGTACCTGTACTGTCCTTTCAGAGCAAATTTGCTAATTAGAAGCCGTGCGTATTCTGCTGCATT
TGATTTCACATTATGGGTTGTGCGTATT----------------------CTGTACTTTTAGGGTTGTGT----TGTTAA
AACTTAAGTTACATTATAGGAATGCTACTGTAGGAAATTTTACTTCCTAG------------GAATTTGAATCCTTCAAT
GGTCCTTACTTTTTCATTGTTATTAGTGAATGTCAATACAATACACA-----TCTTTTATTGCTTTGTAACCATTGGGGG
TTACCTTCAACAGATGAGCGTGTGCCGTCAGACCTGAAGAAGAGCATTATGCAGGCTAGAACGGACAAGAAGCTCACACA
GGCACAGCTTGCACAGGTATGAAC---CTTACTTCACTGCCAACCTGAAATCTGTAACATCTCTCTGCCTT-CATTCCCT
AAGACACATTGTTTTATTACCAGCTGATCAATGAGAAGCCACAAGTCATCCAGGAGTACGAGTCAGGCAAGGCTATCCCA
AACCAACAGATCATCGGCAAGCTGGAAAGGGCTCTTGGCACAAAGCTGCGAGGCAAGAAGTGAAGCTGCGTGTGCATCTG
ACAGGAGTCGAGGCTTTCAAGA---GAGCTTGGCTGGGCAAGTTTACCGCTAAATAAAGCTTGTCTACTAAATCATGCGA
CTTAAGAAAACCCCGGAGTTTGGTATTTCGCTCAGGTTTGGGTGAATGTAATTATTAGCTTCTGTGAACAACTCTGTATC
TGGGTTTCGTTTCGTCAGCGTGTCTTCGTGAATGTGAACTGTTCTGAATGCCTGAACCTTTATATAACTTGTCTCTGTTG
CCAAATGTCTCTGCATC---AACACTTATTTGCTCCTGCGTGTTTATTTTTATTTTTTGAAGACGATGAGAGTTTGCGAC
TCGGTTTGTTTTCATTTCTACTAGTAGGATG------------------------------GGCCCTTTTTGGTTTGAGC
GTTTTGAAAATACATGAACATGAATTGGATGCGATGGCATGTTCAATTCTAAATTTCTAATAGAAGAACTGAATGTGCGA
TAAGATGTTTTGGTCGTGTCAC--ACAGAAAACACACAATTCT-------------------------------------
---------------------------------------------------TTCTAGAAGAACTGAAATGGCATATTAAG
TGCATGACATATTTGTCATTGAAAGAAAGAAAAATATCTATGAGAA----------------------------------
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--------------------------------------------------TCTTCTTTTAAAAATGAACTAGATTATGGA
GAAAAATCACT---GTTCGCAATACGGA------------GAACATACTCCCCCCAAAATTATTTAAA-TTCTCTGGAAA
CAAAATATCTCTAAATTTCTGATACTCCCTCCTTTTTTTTGTTAACTCTGCATAGAAGCTTTGTCTTGAATCAAACTTTC
TGAAGTTTGATCAAGCTTGTAGAAAAAA-TATTAGCATCTAGAAGGAGTATCAAATAGGTACAATATGAAAATATATTCG
ATGACAATTCTAGTAATATTGATTTGATACTGTAAAGCTTCATGTATTTTTCTACAAACTCAGTTAAAATTTTAAAAGTT
TTAATTTAAATAAAAACTAATATATGGGGACTAAAAAGACACGGAGGGAGCATAGAACTCTTTTGAAGCAAAGAGGTCCT
GAAATGGCAAAGCTCTATTTCTGCGGTTTGCCGCGCGCGGCGGCGACGGCGACGGGGACGGGGG---------CGCGGCC
TTCCCTCCCTCCCCCCTCCGAATCT
>chr3D_81
GTAGGTTTTTGTTG------------------------------------------------------------------
-------------ATGCTCCCTTGTTAGATGCATGTGTTAGTTTCTCCGCAATTTCTTGCCTGATTCTATTTTTCTATAG
CTAGATTTTGAAAAAGTTCATGAAATTGAGAAAAAGTTCACTAACTTGAGAAATGTTATCGGATTTGAAAAATTT-----
AATTGGAAAAAGTTCACTAACTTGAGAAAAAATGTGAATTTGAAAAAAGTTCACAGATTTAATAAATTGTTCATAAAGTT
TT---------AACGCTAAAAGTTCATGAAATTTGAAAAAA-GTTTCTGGGATTTGAAAAACTTCGTGAATTTGAAAAAA
GTTCATGCATTCAATAAAAATATTCATGGATTTTAAGAAATTTATGTATTTGAAAAAGTTCACGGATTGAAAAGTTTATA
TACATTGGAAAAAACCGTGAAACAAAAAAAAGATAATACCGAATATAACAATCTGA-AAAAAAAACTAAATGCGGTCGTG
AAAGTTTGGGGAAGCTTCATTTCAGGAGCGAGTGTGAGTTGCGG------------------------------------
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------------------------------------------------------------------AAATGAATGAAAAA
ATGCGGTCACCAAAGAGAGAAAAAGCTAAATGGTCC--------------------------------------------
------------------------AA----GTCCGCTCCGACACGTTACCAGCCCATCAGTTTCGCGGAAGGGCCCATTT
GCGTTCACCTCAAGAGGAGTCACGAGACCGTCGCCACCTTAACCCCGATCATTCGCACCGACCAAATCCTCATCGTCTCC
AACCTCGGCGAAACCCTAGC-TAGCCCCACCGAATCGCAAGCCCCCCCCCCGAAGCCGGAGCAAGCCGAGATGTCTCGCA
CCGGACCGATCGCCCAGGACTGGGAGCCGGTGGTCGTGCGCAAGAAGCTGCCCAACGCCGCCGCCAAGAAGGACGAGAAG
GCCGTCAACGCCGCCCGCCGCGCCGGCGTCGACATCGACATCGCCAAGAAGCGTACGCATCCTTCCTGGCCCGTCCTTTT
CGACACCTTGTCTCGGAGTAGAAAGGAATCGCTTGACGCGGCGGTGGATTTGGTTTGGCCGCGTAGTGGCTAGTTTGTCT
TAAGAGTAGGCGA-GGG--TTTTCGCCAGATTGGCGTGCGATGCTGCGAATCTTAGGGCGTCGGATTGAGTCTCCTTGAT
TTTCGGACATCGGCGT-GTCGTAATCCGAAGCATGTTCATGTTTCACACGAGGGTTTTCGGTAGAATGGATTCCTTGGCC
TTTTTTTTAGGGA---AATAAATTATTATGAAATTTTGGAAGAATAAATTGTCTGTAAGCTTTAGAAGACCAGGGCATGT
TCTTGTTTGGTCATTTGATTGTGCTAAGCATCTTATTTTCATGAGATTTT-TTTCTTTCTTCTCCGATTCACTTGTTTGA
TTGGTGACGATGCAGCACTTGTACTGAATCTGAGGTTAGAACATACAGTTACTGGGGTTTAATCCTTGTAGTCTGT--AT
TGCAGGAGTGGCTC--TGATTGCATCTCTGATGTGATCATGCATTCGGATTTGGTACTGAAAG--------TTAAAATAT
CTACACTCCTTTGCAGCATGTAAAATCGTCAAAAAGTGTTGATAAGAACCTGTGATATGTTGGGGCAAGATCTGTATAAG
TAGAATGACGTTGCAT----------------------------------------------------------------
--------------------------------CAATTAGCATGTCTAAAGTTTATGAATTTTTTCGGACGAGAAAGAACA
ATATTAATATAACATTTATGTACCTTATGAAAAAAGTTCAATCACACGCTGAGAAATAGAAGTGACAA-TCTTGGTGTGG
ACATTAGCAAGGTAGATTTCTGCTACTATTACAGCAATGTTTGCCCCTT-TTTTTCCGCGATGTGTGGGTTGAGCTTGGA
TTTGAAAATTAGTGTGTT-GGTAGATCCATGTTATATTAGTC-TTTTCTAAATTATAATCAGAATTCTATATGACTATTA
GAAATGTTAATTATCCTTTTAGTGCACCTGT-ACACCTCATGTGCCTAGTTTCTAGTGCACACCTATTGTGTTTAAGTGT
GGATTTTATATGATCCATATGTTT-AACTGTTTATTTTTGTGCATAAGGGGAGTTAGTGATGTCTACTGTCTTGGTTTCC
TTTGCAGTAACGCACTTCATGCCAACATTGAACAGTAATTTCTTG-----------------------------------
----------------------CTCATGTTAGTTAAGTGATTGCCATTGAAGAGGTTTAG----TTAAGCCTGTCCTGGA
ATACCTTTCTCTTTTATGATGAGTTA-TTTTCTAGTTTTCTTATGCA------------TATGGCCATCATAAATGCTTG
AACATGATCAGTATGTGATATCTTGTATAATAGGCGGTGCTGTAAAAGAGG--CTTCCATCGTATGATCAAAATATCTAT
CTGTGCATATCTTTTGCACACTTTTGTCGAGATAGATATGTGAGAGTTTTATATATTGCTTTAACTTGGATGACATTGTT
GATGAATGCAGATAATGCTGGGACAAACAAAGCTGCTCATAGCACCACATCGCTCAATACAAAGAGGCTTGATGATGATA
CAGAGAATCTTGCTCGTGAGTTCCTTACACTTTTTACTTCTATATGTTTC--------AAAAGGAATGACTACCTAGCAA
AGCTGTTTATTGTCCAATCATTTTGTTTATGTGATG--------------------------TGC--GTATGGCAATCAT
TTTGTTTATGTGATGCGTGTATG----TCTCAGTTAAATCTAATAATATC---TGTGAAATATGGCAATGCTTTTTTCCT
TTGGTTAAAAGGAACTATACATGAGTATGCTTGTTAGTTGATCAGTTTCCCTTGTTTCTCAATGCGTTGACATGCATTTC
TGTATGTGTCTACTTATCTA--GTAAAGAATGTTGTGCTTGCTTGAGTGTTCCACACTATCGAGGCAACACTATTTCCTA
ATTGATCTACTATCATGGACTCGTGACTTACCCAATTGTTCGATGAATTCTGTGAGGTTTGTAATAAACATAATTTGTTG
TGAAGTACAAGTCAGTTTTTTCTTTGTTTCTACTGATATT--------------AATTCAACTGTTGATCACAAGGAAAA
TAA-GTTCCTCTATAATGTACCTGTACTGTCCTTTCAGAGAAAATTTGCTGTTTAGAAGCAGTGTGTATTCTGCTGCATT
TGATATCATATTCTACAAATATGGTAATCATGATTTTTCTATGGGTGTACCTATACTTTTATTTAGGATTACGATGTTAA
AACTTAAGTTACATTATAGGAATGCTATTCTATGAAATTTTACTCCCAAG------------GAATTTGAATCCTTCAAT
GATCCTTACTTTTTCATTGTTATT---GAATGTCAAT-------ACAATACATCTTTTATTGCTTTTTAACCCTTGGGGG
TTATCTTCAACAGATGAGCGTGTGCCGTCAGACCTGAAGAAGAGCATTATGCAGGCTAGAACGGACAAGAAGCTCACACA
GGCACAGCTTGCACAGGTATGATGAATCTTACTTCACTACCAACCTGAAATCTGTAACATCTCTCTGCCTT-CATTCCCT
AAGACACATTGTTTGATTACCAGCTGATCAATGAGAAGCCACAAGTCATCCAGGAGTACGAGTCAGGCAAGGCTATCCCA
AACCAACAGATCATCGGCAAGCTGGAAAGGGCTCTTGGCACAAAGCTGCGAGGCAAGAAGTGAAGCCGC--GTGCATCTG
ACAGGAGTCGAGGCTTTCAAGA---GAGCTTGGCTGGGCAAGTTTACCGCTAAATAAAGCTTGTCTACTAAATCATGCGA
CTTAAGAAAACCCTGGAGTTTGGTATTTCGCTCAGGTTTGGGTGAATGTAATTATTAGCTTCTGTGAACAACTCTGTATC
TGGGTTTCGTTTCGTCAGTGTGTCTTCGTGAATGTGAACTGTTCTGAATGCCTGAACCTTTATATAACTTGTCTCTGTTA
CCAAATGTCTCTGCATTATTAACAC----TTGCTCCCGCGTGTTCATTTTTATTTTTGGAGTTC----------TGCGTC
TCGGTTTATTTTTATTTCTACTAGTAGGATGTTATTACTGGGCATTTCATGTTAATGTCAGGGCCCTTGTTATCTTGAGG
GTTTTGAAAATG------CATGAATTGGATGCCATGGCATGTTGAG--------TTCTAGTAGAAGAACTGAACATGTAA
TAAGATGTTTTGGGTGTGTCAC--ACAGAAAACACATAATTCTTGCTCCCTCCGTTCCAAAATAGATGACCCAACTTTGT
ACAAGTACAAAGTTGGGTCATCTATTTTGGAACGGAGGGAGTATTAAAGAATTCTAGAAGAACTGAAATGGCATGGTAAG
TGCATGCCATATTTGTCACTGAAAGAAAGACAAATATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTTCTTTTGAAATTGCACTAGATTATGGA
GAAAAACAAACACGGTTTTCAATTTGGAAAAAGTCACATGGAGCATACTCCCCCAAAAATTATTTAAAATTCTCTGGTAA
CAAAATATCTCTAAATTTCTGGTACTCCCTC---CTTTTTCTTAACTCTGCATAGTAGCTTTGTCTTGAATCAAACTTTC
TGAAGTTTGATCAAGCTTGTAGAAAAAA-TA-------------------------------------------------
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>chr3B_733
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---------------------------------------------------GAGTGTGAGTTGCCAAAATGAAGGAAAAA
ATGTGGTCACTAAAGAGAGAAAAAACTAAATGGGCCGAACCCAA-----------------GGTGAACTGCGACCGAAAC
TGATGAGAACAAAAAGAGAGGTCCAA----GTCCGCTCCGACACGTTACCAGCCCATCAGGTTCGCGGAA-GGCCCATTT
GCGTTCACCTCAAGAGGAGTCACGAGACCGTCGCCACCTTAACCCCGATCATTCGCACCGACCACATCCTCATCGTCTCC
AACCTCGGCGAAACCCTAGC-TAGCCCCACCGAACCGCAAG---CCCCACCGAAGCCGGAGCAAGCCGAGATGTCTCGCA
CCGGACCGATCGCCCAGGACTGGGAGCCAGTGGTCGTGCGCAAGAAGCTGCCCAACGCCGCCGCCAAGAAGGACGAGAAG
GCCGTCAACGCCGCCCGCCGCGCCGGCGTCGACATCGACATCGCCAAGAAGCGTACGCATCCTTCCTGGCCCGACCTTTT
CGACCCCTTGTCTCGGAGTAGAAAGGAATCGCTTGACGCGGCGGTGGATTTGGTTTGGCCGCGTAGTGGCGAGTTCGCCT
TC-GAGTAGGCGCGGGT--TTTTCGTCAGATTGGCGTGCGATGCTGCGAATCCTAGGGCGTTGGATAGAGTCTCCTTGAT
TATAATCGTACATCGGCGTGGTAATCCGAAGCATGTTCTTGTTTCACGCGAGGGTTTTCGGTAGAATGGATTATTTGGCC
GATTTTTTTCCAGGGGAATGAATTATTAGGAATTTTTGGAAGAATAAATTATCTGTGAACTTTAGAAGACTAGAGCATGT
TCTTGTTTGGTCATTTGTTAGTCCTAAGCATCTTATTTTCATGAGATTTTCTTTATTTCTTTTATGATTCACTTGTTTGA
TTGGTGATGATGCAGCACTTGTACTGAATCTGAGGTTAGAACATACGGTTAGTGGGGTTTATTTTTTGTAGTCTGT--AT
TGCAGCAGTGGCTCATTGGTTGCATCTCTGATGTGATTGTGCATTTGGATTTTGTACTGCAAG--------TTAAAATAT
CTACACTCTTTCACTGCATGTAAAGTCATCAAAAAGTGTTGATAAGAACCTGTGATATGTTGGGGCAAGATCTGTATAAG
TAGAATGATGTTGCATTAATGTTGTCTTGGTTCTGGATGGAAGTAATACTGTAATAGTATGTTGGGGTGATGTTGTGTGT
GCTAACTGGTTTAGGGTGCACTATTGTCTTGTCAATTAGCATGTCGAAAGTTTATGGAAGTTTTTGGAATAAAAAGAACA
ATATTTATACAACATTTATATACCTTATCAAAAAAGTTCAATCACACACTGAGAAACAAAAGAGATAAATCATGGTGTGG
ACTATTC-----------------------ACAGCAATGTTTGTCCCTTCTTTTCT-GAGATTTGTGGATTGAACTTGGA
TTTGAAAATTAGCGTGTTTGGTAAATCCATGATGTATCAATCTTTTTCTAAATTATAAATAGGATTCTACATGGATATTA
GTATTTTTAATTATGCTTTTAGTGCACCTGT-ACACCTCGTGTGCCTAGTCCCTAGTGCACTCCTATTGTGTTGAAGTGT
GGA--TTATATGATCCATATGTTTTAATTGTTTATTTTTCTGGATAACGGGAGTTAGTGATGTCTACCATCTTGGTTGTC
TTTGCAATAACGCACTTCATGCCAACATCAAATAGTACTTTCTCGCTCATGTCAGTTAAGTGATTGCCATTGAAAAGGCT
TAAGCTGGTCATGGAATACCTTCTCATGTTGGTTAAGTGATTGCCATTGAAGAGGTTTA--------AGCTTGTCATGGA
ATACTTTTCTCTTTTATGATGAGTTA-TTTTCTAGTTTTCTTATGCATGTTATGGGCCTTATGTCCATCATAAATGCTTG
TACATGATCAGTATGTGATATCTTGTATAATAGGCGGTGCTGTAAAAGAGACACTTCCATTGTATGATCAGAACATCTAT
CTGTGCT--TCTTTTGCACACTTTGTT-GAGATAGATATGTGAGAACTTTATATATTGCTTTAACTTTGATGGCATTGTT
GATGAATGCAGATAATGCTGGGACAAACAAAGCTGCTCATAGCACCACATCGCTCAATACAAAGAGGCTTGATGATGATA
CAGAGAATCTTGCTCGTGAGTTCCATGCACTTT-TACTTCTATATGTTTC-------AAAAAGGAATAACTACCTAAAAT
AGCTGTTTATTGTCCAATCATTTTGTTTATGTGGTGTGTGTATGTCAATCTTGTTTATGTGATGTGTGTATGGCAATCAT
TTTATTTATGTTATGTGTGTATTTCTTTCTCAGTTATATCCAATAATATC---TGTGAAATATGGCAAAGA-TTTTTCCT
TTGTTTAAAAGGAACTATACAGGAGTATGCTTGTCAGTTGATCAGTTTCTCTTTTTTCTTAATGCATTGACATGCATTTC
AGTATATATGTACTTATATCTTGTAAAGTATGTTGGGTTTGCTTGAGTGTTCCACACTATTGAGGTGACACTTGTTCCTA
ATTTATGTACCATCATGGACTCATGGATTACCCTATTTTTTGATGAATTTTTTGAGGTTTGGAATAAACATAATTTGTTG
TGATGTACAAGTCAGGTTTTTCTTAGTTTCTACTGATATTC------------------AACTGTTGATCACAAGGAAAA
TTAGGTTCGTCTATAATGTACCTGTACTGTCCTTTCAGAGCAAATTTGCTGCTTAGAAGCCGTGTGTATCCTGCTGCATT
TGATTTCATATTCTATAAATATGGTAATCATGATTTTTCTATGGGTG---CTGTACTTTTATTAGGGCTACAC-TGTTAA
AACTTAAGTTACATTATAGGAATGTTATTCTATGAAAATTTACTTTTACTTTAAAGGAATTTGAATTTGAATCCTTCAAT
GGTCCTTTACTTTTCATTGTTATT---GAATGCCAAT-------ACG-----TCTTTTATTGCTTTTTAACCATTGGGGG
TTATCTTGAACAGATGAGCGTGTGCCGTCAGACCTGAAGAAGAGCATTATGCAGGCTAGAACGGACAAGAAGCTCACACA
GGCACAGCTTGCACAGGTATGATGAATCTTACTTAACTGCCAACCTGAAATCTGTAACATCTCTCTGCCTTTCATTCCCT
AAGACACATTGTTTGATTACCAGCTGATCAATGAGAAGCCACAAGTCATCCAGGAGTACGAGTCAGGCAAGGCTATCCCA
AACCAACAGATCATCGGCAAGCTGGAAAGGGCTCTTGGCACAAAGCTGCGAGGCAAGAAGTGAAGCTGC--GTGCATCTG
ACAGGAGTCGAGTCTTTCAAGAGAGGAGCTTGGCTGGGCAAGTTTACCGCTAAATAAAGCTTGTCTACTAAATCATGCGA
CTTAAGAAAACCCTGGAGTTTGGTATTTCGCTCTGGTTTGGGTGAATGTAATTATTAGCTTCTGTGAACAACTCTGTATC
TGGGTTTCGTTTCGTCAGTGTGTCGTCGTGAATGTGAACTCTTCTGAATGCCTGAACCTTTATATAACTTGTCTCTGTTA
CTAAATGTCTCTGCATTATTAACACTTAATTGCTCCTGCGTGTTTATTTTTATTTTTTGAAGACAATGGGAGTTTGCGAC
TCAGTTGGTTTTTATTTCTACTAGTACGATG------------------------------GGCCCTTTTAGGTTTGAGC
GTTTTGAAAATG------CATGAATTGGATGCGATGGTGTGTTGAATTCTAG------------AGAATTGAATGTTTAA
TAAGATGTTTTGGTTGTGTAAAAAACAGAAAACACACAATT---------------------------------------
-------------------------------------------TTAAAGAATTCCAGAAGAACTGAAATGC---------
--------------GTCATTGAAAGAAAGAAAAACATCTATGGAAA----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------TCTTCTTTTGAAAATGCACTAGGCTGTGGA
GAAAAATAACT---GTTTTCAATATGGAAAAAGCCACATGGTACATACTCCTCCAAAAATAATTAAAAATTCTCTGGAAA
CAAAATATCTCTAAATTTCTGGTACTCCCTC---TTTTTTTTTAACTCTGCATAGTTGCTTTGTCTTGAATCAAACTTCC
TGAAGTATGATCAAGCTCGTAGAAAAAAATATTAACATCTAGAA----TATCAAATAGGTACAATATGTAAATATATTCC
ATGATGATTCTAATAGTATTGATTTGATATTGTAAAGCTTCATATTTTTCCGTACAAATTTAGTTAAATTTTAAAAAGTT
TGACTTAAAAATAAAACTATACTATGCGGACTAAAAAGACACGGAGGGAGTATAGAATTCTTTTGAAGCAAAGATGACCT
GAAATGGCCATGCTCTATTTCTGCGGTTTGCCGCGCGCGGCGGCGACGGGGACGCGCCGCCGCCAACCGTCTTCGCGGCC
TTCCCTCCCTCCCCCGTCCGAATCT
>SNPs
S-S-S--SS-S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSS------S---------------------------------S-----S-S-S------------SS--
---------S-------------------------------------------S---SS---S---------S--SSSSS
----SS----S-------------------SS-SSSS-S--SS--------SS---------S---S-SS-SSSS--SS-
S-SSSSSSSSS----------S---------S---------S----S--------S---------SS--------S----
S----S--------------S---SS--S---S--S----S----------S----------------------------
---------S----S-S--------S----SS-S--S-----------S--SSSS-S----S-S-----------S----
-------S----------------S-----------S-------SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---S---S-----SS--------------
----S-----S--------------------------SSSS-SSSSSSSSSSSSSSSSSSS-------------------
-S-----------------------SSSSS--------------------------S------S------S------S-S
---------------------S----------------------------------------------------------
--------------------S-------S---------S-----S------------------------------S----
--------------------------------------------------------------------------------
-------------------------------------------------------S--S---S---S-----SSS-S--S
-S-S---S-S--------------SS-------S--S----S-------------------------S---S-------S
-----------------SS------S--------------------------------------------S---------
---S--S---S-------------------SS------------------------------------------------
----S--S-S--------------S-----------------------------S-SS-S------S------S---S--
-----------S------------S-----S--------SS-SS--SS------S-----------------S-------
-SS-------------S----S----------------SS-------------SS---------------------SS--
-------------------------------------------------------------SSSSSSSSSS---------
-S-------------------------------S------------------------S-------S-------------
---------S-------S--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------S------------------------
-----------S--------------------------S----------S---------------------------S--
---S-----------------------SSSSS-----------------------------------------------S
-----------------------------------------------------------------SS----------S--
--S-------S---------------------------------------------------------------------
-----------------------------S---------S-------------------SSSSS----------------
------S-S-----------------S----------------------S------------------------------
--------------S-------------S----S---------------S-SS--------S------------------
---------------------------S------S---------------------------------------------
--------------------------------------------------------------------------------
-----------------S---------------------------S-S-SSSSSSSS--------------S--------
------------------------------S-------------------------------------------------
---------------------S--------------------------SSSSS--------------S-------S----
--S-S-------------------------------------------S----S------S-------------------
----------------------------S---------------------------S-------------S--S------
-------------------------S------------------S-----------------------------------
--S--------------------------------------SSSSSSSSSSSSS------------S-------------
S--------------S----------------------------------SS------------S---------------
--------S---S-SSSSSSSSS---S----------------------------------SSSSS-SS-----------
---------------------------S-S--S--------------S--------------------------------
------------------------SSS----------SSSSSSS----------------------S-------------
---S----------------------------------------------------------------------------
----------------------SS--------------------------------------------------------
--------------S-----------------------------------------------------------------
---------------------------------------------------------------------SS---------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
------------------S------------------------------------------------------------S
----------------S-----------S-----------------------------------S---S-----------
------------S-------------------------------------------------------------------
-----------SSSSSSS-------------------------S-------SSS-----S-----------------SS-
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------SS----
------S-----------------------------------SS------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S------S-------------
-------S---------SS-----S-----------------------------S-------------------------
---------------------S---------SSS------S--------------S------------------------
----------------------------------S---------SSSS--------------------S----------S
----SS------S--S-------------S-------------S-S---SSS------S-S-------S---S-------
-S-S--S---SS-------SSS----S-----------------------S------S----------------S-S---
--------S-S--------------------------------------S----S-SSSSS-SS----------------
---------------S---------
>forward_848
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----------------------------AATGGGCCGGTTTCTCGAAT--------------------------------
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-------------------------
>reverse_2590
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-----------------------------CGGTTAAGTGGTTGCCATTGA------------------------------
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-------------------------
>forward_944
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------GTTACCAGCCCACCAGGTTT----------------
--------------------------------------------------------------------------------
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-------------------------
>reverse_3249
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------------------------------------------------ACCTTCTTTCTCGTGCGTTGA-----------
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>forward_1348
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------------------------------------------------TTTGGTTTGGCCGCGTAGTA------------
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-------------------------
>reverse_3254
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-----------------------------------------------------CTTTCTCGTGCGTTGACATGC------
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>forward_1471
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-----------AGGCGTGTGGTAATCCGAAT-------------------------------------------------
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>reverse_3844
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---CCTTCAACAGATGAGCGTGTG--------------------------------------------------------
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-------------------------
>forward_3337
--------------------------------------------------------------------------------
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------------------------------------GCTTGCTTGAGTGTTCCACAG-----------------------
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>reverse_5755
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--------------------------------------------------------------------------GGTCCT
GAAATGGCAAAGCTC-----------------------------------------------------------------
-------------------------
