>input_sequence_28038
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--------------------------------------------ACTCACCCACACAAATCATCTCCTCT----------
-------------------------CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCACGCACGCACGCACGCACA-----
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-------------------------------------------CAAGAAAAAAATCAAGATGGTTGACACACTGAGTGAA
GAGAAGATCATTGGATACTTCAAGAACAAGAGCATCCTCATCACTGGATCAACAGGCTTTCTTGGAAAGAGTATGCATGC
ATGCA----TAATGTTTATGCACACATATTACGCATGCATATACTTTTTTTTGGCAAATTCTAGAAGTTTTTT---GCGT
CAAGTTCATATGTG----------------------------------------------------------CTGTCCTC
ATCTGTTAATTAGTTC-ACTGTTGGTGTGCGTATATGCAGTACTAGTGGAAAAGATACTGAGAGTTCAACCTGATGTGAA
GAAGATCTACCTCCCGGTGCGAGCGGTGGATGCCGCTGCGGCGAAGCATCGGGTGGAGACTGAGGTAGTGTTGTCCATCA
TGGTTCTTCATGATCTATACCCTTTACC-----CCTCTCATGATTCTTTTGATCCCTTTTCTTCAGAGTTAGCGCTGACT
AATTTCTTTTCTAT------------------------------ATGCGCAGGTGGTAGGGAAGGAGCTGTTCGGGCTTC
TGAGGGAGAAGCACGGGGACGGGTTTCAATCTTTCATCGGAGAGAAGATCGTCCCGTTGGCCGGAGATGTGATGCGTGAG
GACTTCGGCGTCGACAGCGAGACCTTGAGGGAGCTCCGGGTGACCCAAGAGCTCGATGTCATCGTTAATGGCGCCGCCAC
CACCAACTTCTACGAAAGGTGCGTCATTGTCAACTGATTGTTTTGTCCAAGAAAGGA---AAAATCAGCAGAGAACTT--
GAGTAGGTGCAGCAAGAGTACGTACGCA----------------------------------------------------
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--------GTGAATGGTCTCAGAAGAACACTTGTGT------------------GCGTGCAGGTATGATGTGGCCCTGGA
CGTGAACGTGATGGGAGTAAAGCATATGTGCAACTTCGCCAAGAAGTGCCCCAATCTCAAGGTGCTCCTCCACGTTTCCA
CGGGTACGTACACCAACTCTACAAGTA--------------------------------------AAAACAAAAATAAAG
TTCTTGGATGTTAATTATAATACACCTAGATTTGATTTACAAATGAAGTTAATAAATTCATATATGAGTTGGTGCAGCTT
ATGTGGCGGGTGAGAAGCAAGGACTGGTGCAAGAGAGACCATTCAAGAATGGCGAGACGCTGCTTGAGGGGACCCACCTC
GATATCGACACCGAGCTGAGACTGGCCAAGGACCTGAAAAAGCAGCTTGAGGCCGACGTCGACTCGTCGCCCAAGGCCGA
AAGGAAGGCCATGAAGGACCTTGGCCTTACCAGGGCCCGGCACTTCGGGTGGCCGAACACATACGTGTTCACCAAGTCGA
TGGGGGAGATGGTGCTGGGCCAGTTGCAGTGTGATGTCCCTGTTGTCATCGTCCGTCCCAGCATCATCACCAGTGTCCAG
AACGACCCACTGCCCGGATGGATCGAAGGCACCAGGTTCATTAT----------------------------------AT
GTTTCTTGTCCTTTCTCTGCCTCCAAATTTAGAGTGCAATCGTCTTACTCTGTTGCAAATGCCAAAAG--AAGTAAAATA
TGATATTTGTTCAATGT--AAAAATGTAAATTGCAGGACGATCGACACGATCGTGATCGGCTATGCGAAGCAGAACCTGA
CATACTTCTTGGCCGACCTCAACCTCACCATGGATGTGGTAAGCAACGTTGTACTATGCATGCAGTTAAG----ATATAT
TCCAG----GCAATGGTTGGTTGTCAGTCCAGTCCAGGAATCCGTACAGTAAGATG------------------------
-------------AATTTCGACGACGATGGTGAAAGCAATCGTTTGGTTGGGTATATGTTGCTGTAGATGCCCGGCGACA
TGGTGGTGAATGCGACGATGGCTGCCATCGTGGCACACAGCTCGTCCTCATTGGAGAAGACAAAGCCATATCCCGAGCCA
CACGCACCGGCGGTGTACCATGTGAGCTCGTCGCGGCGTAATCCGGCACCATACAATGTGCTTCACGAGGCGGGGTTTCG
GTACTTCACGGAGCACCCTCGGGTGGGCCCTGACGGCCGCACCGTGGGTACCCATAAGATGACATTCCTCAGCAGCATTG
CTTCCTTCCACCTCTTTATGATGCTCAGGTACCGCCTCCTCCTCGAGCTCCTCCACCTGCTCTCCATCCTCTGCTGCGGC
CTCTTCGGCCTCGACACCCTCTACCACGACCAAGCACGCAAGTACAGGTTAGTTAGTTGGTTGAAATCTTGTGCGG-TT-
----------------------------------GTATCTTCTTGATGGCTCCCACATAATTAAGATGACACGACTTTTA
TTGTTGTATTGTTATAGGTTCGTGATGCACCTGGTGGATCTGTACGGGCCCTTCGCGCTGTTCAAGGGGTGCTTCGATGA
CGTCAACCTAAACAAACTAAGGCTCACCATGACCAGCAACCATGGCAGCCTCTTCAATTTCGACCCGAAGACCATTGACT
GGGATGACTATTTCTACAGGGTCCACATCCCCGGGGTCATAAAGTACATGCTCAAGTGAAATATCCATGCACCGAAA-TT
CAGGCGTTGCCTTAGTAATTAAATAATCGTACG-TTG-----------CTCCCAAATTGGGTTCTAACCGTTAAATAATC
TATATGAAAGAGGAAAATGTGTCTGTCGCTTGATAGAGCAGGCATCAAC-TTGCATATGCTTCTTGAAGAACAAGGAATG
CTACATTATGTAGTCTTGTTCTAGCTCATG--TTGTATTGCCAGTTATGACTAGTATTGGTTGA---TAACAATTTCTTG
TTCAGTCACATGTTGTACCTTGACTAGTATTGATTGTTA---ATAATTTCTTTTCAAGAGAAATAAA-------------
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>chr4D_1_TraesCS4D01G356300
TGGAGCAGATGGAATTAGTAGGCGCCACATATTGCAGGTCTATGCTGCCCGTGCGTACCGGGAATTACTAGTGCAGGCCT
CTTTAAGTCGGTCAGGTACGTAGCAAATAAACCAAACAAGCAGGACATGTTTGAAAATCACTGTTCTAACTTTAATAATG
CACACAAGGAATTGAAGGCTTGATAAATCCTGTGCTAGTACCACCCATCCGACTGTCGGTTTTTAAGACATG---GTAGA
GTAGAGTACTAACATAACGATCTTCAAGATATTGTGTCCAAGTTCTTTGCCACAGGTTTGTCGTATTGAGCCAAAATATA
CCACTGAATTATGTGCTAATAGTGTAATTATTGGTCAATTTTTTGTTCTAACGAGAGAAAAATACGCTATGCGTTTTGAA
GGGATGGAGTACGATGATACTACTCTATTGTACTCCACGGATCAATTGTAGGAGTACCCTCTAATTTCTAATGGTATAAC
TTTGATGACATACGATTTGTATTACGTTGGTTGAATTGTACATGGGCCTTCTATAAAGCGAAAAAGAAAGGAATACTGAG
CTTCTCTAGTTTTCTATAAACCAGAGTTAGACGTCCTACTGGACAACTCATTCCTAAGTGTGTAGCAATAATACTGAGTA
CTACCGGTTGTCCACTTGAGCT--AT------------------------------------------------------
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----------------------TAATTTGATGGCTAGCAA-CGTACTGCAACCCCAATAATAACCCTGTTTGAAAATCTA
GAGTACCTCTACGCGTTATTTTGACTGCATGTGATTCCTCTCATGATCACCAGGTCCTTGTTTTGGTTGGACAGCGCATA
AATGTTGCGCTC--AAGTGCCTCAAATTAAGACTCCCCTCTCCTACCTACAACACAAAAGACCTTTTTTTCAGCAAAAGA
GGGCGCCACCCCCTCCGATTTCATATAATGAAACCAACTGGTTCAACTGCCAAACAAACAACAAAAACAAAACGAAACAC
CTTCATGGCCCGTGTATAAATATTGTGTACATGACCCTCTTTCCACTCACCCACACAAATCATCTCCTCT----------
-------------------------CTCTCTCTCTCTCTCTCTCTCTCTCTCTCGCACGCACGCACGCACGCACA-----
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-------------------------------------------CAAGAAAAAAATCAAGATGGTTGACACACTGAGTGAA
GAGAAGATCATTGGATACTTCAAGAACAAGAGCATCCTCATCACTGGATCAACAGGCTTTCTTGGAAAGAGTATGCATGC
ATGCA----TAATGTTTATGCACACATATTACGCATGCATATACTTTTTTTTGGCAAATTCTAGAAGTTTTTT---GCGT
CAAGTTCATATGTG----------------------------------------------------------CTGTCCTC
ATCTGTTAATTAGTTC-ACTGTTGGTGTGCGTATATGCAGTACTAGTGGAAAAGATACTGAGAGTTCAACCTGATGTGAA
GAAGATCTACCTCCCGGTGCGAGCGGTGGATGCCGCTGCGGCGAAGCATCGGGTGGAGACTGAGGTAGTGTTGTCCATCA
TGGTTCTTCATGATCTATACCCTTTACC-----CCTCTCATGATTCTTTTGATCCCTTTTCTTCAGAGTTAGCGCTGACT
AATTTCTTTTCTAT------------------------------ATGCGCAGGTGGTAGGGAAGGAGCTGTTCGGGCTTC
TGAGGGAGAAGCACGGGGACGGGTTTCAATCTTTCATCGGAGAGAAGATCGTCCCGTTGGCCGGAGATGTGATGCGTGAG
GACTTCGGCGTCGACAGCGAGACCTTGAGGGAGCTCCGGGTGACCCAAGAGCTCGATGTCATCGTTAATGGCGCCGCCAC
CACCAACTTCTACGAAAGGTGCGTCATTGTCAACTGATTGTTTTGTCCAAGAAAGGA---AAAATCAGCAGAGAACTT--
GAGTAGGTGCAGCAAGAGTACGTACGCA----------------------------------------------------
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--------GTGAATGGTCTCAGAAGAACACTTGTGT------------------GCGTGCAGGTATGATGTGGCCCTGGA
CGTGAACGTGATGGGAGTAAAGCATATGTGCAACTTCGCCAAGAAGTGCCCCAATCTCAAGGTGCTCCTCCACGTTTCCA
CGGGTACGTACACCAACTCTACAAGTA--------------------------------------AAAACAAAAATAAAG
TTCTTGGATGTTAATTATAATACACCTAGATTTGATTTACAAATGAAGTTAATAAATTCATATATGAGTTGGTGCAGCTT
ATGTGGCGGGTGAGAAGCAAGGACTGGTGCAAGAGAGACCATTCAAGAATGGCGAGACGCTGCTTGAGGGGACCCACCTC
GATATCGACACCGAGCTGAGACTGGCCAAGGACCTGAAAAAGCAGCTTGAGGCCGACGTCGACTCGTCGCCCAAGGCCGA
AAGGAAGGCCATGAAGGACCTTGGCCTTACCAGGGCCCGGCACTTCGGGTGGCCGAACACATACGTGTTCACCAAGTCGA
TGGGGGAGATGGTGCTGGGCCAGTTGCAGTGTGATGTCCCTGTTGTCATCGTCCGTCCCAGCATCATCACCAGTGTCCAG
AACGACCCACTGCCCGGATGGATCGAAGGCACCAGGTTCATTAT----------------------------------AT
GTTTCTTGTCCTTTCTCTGCCTCCAAATTTAGAGTGCAATCGTCTTACTCTGTTGCAAATGCCAAAAG--AAGTAAAATA
TGATATTTGTTCAATGT--AAAAATGTAAATTGCAGGACGATCGACACGATCGTGATCGGCTATGCGAAGCAGAACCTGA
CATACTTCTTGGCCGACCTCAACCTCACCATGGATGTGGTAAGCAACGTTGTACTATGCATGCAGTTAAG----ATATAT
TCCAG----GCAATGGTTGGTTGTCAGTCCAGTCCAGGAATCCGTACAGTAAGATG------------------------
-------------AATTTCGACGACGATGGTGAAAGCAATCGTTTGGTTGGGTATATGTTGCTGTAGATGCCCGGCGACA
TGGTGGTGAATGCGACGATGGCTGCCATCGTGGCACACAGCTCGTCCTCATTGGAGAAGACAAAGCCATATCCCGAGCCA
CACGCACCGGCGGTGTACCATGTGAGCTCGTCGCGGCGTAATCCGGCACCATACAATGTGCTTCACGAGGCGGGGTTTCG
GTACTTCACGGAGCACCCTCGGGTGGGCCCTGACGGCCGCACCGTGGGTACCCATAAGATGACATTCCTCAGCAGCATTG
CTTCCTTCCACCTCTTTATGATGCTCAGGTACCGCCTCCTCCTCGAGCTCCTCCACCTGCTCTCCATCCTCTGCTGCGGC
CTCTTCGGCCTCGACACCCTCTACCACGACCAAGCACGCAAGTACAGGTTAGTTAGTTGGTTGAAATCTTGTGCGG-TT-
----------------------------------GTATCTTCTTGATGGCTCCCACATAATTAAGATGACACGACTTTTA
TTGTTGTATTGTTATAGGTTCGTGATGCACCTGGTGGATCTGTACGGGCCCTTCGCGCTGTTCAAGGGGTGCTTCGATGA
CGTCAACCTAAACAAACTAAGGCTCACCATGACCAGCAACCATGGCAGCCTCTTCAATTTCGACCCGAAGACCATTGACT
GGGATGACTATTTCTACAGGGTCCACATCCCCGGGGTCATAAAGTACATGCTCAAGTGAAATATCCATGCACCGAAA-TT
CAGGCGTTGCCTTAGTAATTAAATAATCGTACG-TTG-----------CTCCCAAATTGGGTTCTAACCGTTAAATAATC
TATATGAAAGAGGAAAATGTGTCTGTCGCTTGATAGAGCAGGCATCAAC-TTGCATATGCTTCTTGAAGAACAAGGAATG
CTACATTATGTAGTCTTGTTCTAGCTCATG--TTGTATTGCCAGTTATGACTAGTATTGGTTGA---TAACAATTTCTTG
TTCAGTCACATGTTGTACCTTGACTAGTATTGATTGTTA---ATAATTTCTTTTCAAGAGAAATAAATATAGTGCTCCAA
GATTTGTGAATTATGCATAATCTTTTTAAGCGCTTCTCAGTTCAAAACGAATAGCCCAATCGACTAATATTTGTGTATTA
GACTTTGTTTAAATTGACGCATCTCCAGAATTAAAATCAAGAGCGACTGCGTCCATGAACCAGGTCATTATGCATACACA
TCTCACCAAAACATTCAACCATGCATGGGAAAATGTTTTTCATTCAATTTTTCTACTTATATTCAATAAATATTGTTACA
ACTATAGATAATCAAATATAGTAATTCATTTATTTTAATTTTAGTTCTCATGTTATCAACTT-AAATTTTATCAAACAAT
TTCCGCAGCAATGCGTGGGGCATCCTCTATTTTATATTGCACAAAAGTCAGACAGAACTCCTTCCGGTTTGGGCGTTCGG
CTGGCAAGCCTTCCAAAACCCATCAGGCCTTAGTCCCGTTCCTTATAAAGCCCATCCGTCAGGCCTAGCCCAATAGCGAG
TTCGAGCACTCAGGTTTGCTGTTGATACTCCAGTTAATTCGGTAAATTTTGCTAAAAAAAGAAAGTAAATTTGGTAAATA
CAGTTATTTGATAAGTACTAGTATCAATACAGTTATTCTAATACTTGGTAAATACAGTAT-AAATAATAATACACTTTTG
TTTCAGTAAATATCAATCTGTTTCAGTAAATGCGGTACTAATCAAAGTTGACACGAATTTGAATTTGACTAGACAATTTC
ACGTCAAGAAATCACAATAAATTGGTTCGGTAACCCACCGGTCAGGGCCGCACACTCAAGCTGTACTCATCATAC----T
AGGAAAACAACGCTGTCATCAGCAATTCAGCATCATCAACAGAAAACAGATTGGCAACGGGTACATTTAAAAAAGAGAGA
AATTTCTCTGTTTTACATCACTTGATACATTTGGAGTAACGTTTATTATTCTGG-AATGAAAG--AGAGGATAAACACAT
ATTCATGTGCCGTGTTCAGGAACTCTCGCTAGCTGC
>chr4B_1
TGGAGTAGATGGAATTAGTAGGCGCCACACATAGCAGATCTATGCTGCCCGTGCGTACCGGGAATTACTAGTGCAGGCCT
CTTTAAGTCGGTCAGGTACGTAGCACTC-AACCAAACAAGCAGGACATGTTTGAAAATCACTGTTCTAACTTTAATAATG
TACACAAGGAATTGAAGGCATGATAAATTCTGTGCTGGTACCACCCATGCGACTGTCGGTTTTTATGACATACTAGTAGA
GTAGAGTACTAACATGATGATCGTCAATATGTTGTGTCCAAGTTCTTTGCCACAGGAGCA------------AAAATATA
CCACTGAATTATATGCTAATAGTGTAATTATTGGCC-ATTTTTTGTTCTAATGAGAGAAAAATACGCTATGCGTTTCCAA
TGGATGGAGTACGAT---ACTACTCTATCATACTCCACTCATCAATTGTAGGAGTACCCTACAATTTCTAATGGTATAAC
TATGATGACATGCACTAATATTTTGTCAAGTAAATCTTTGGTGAAAATTTAGCACAAATTACAATGAAGACTAATAAACC
AGGACGGAGGTA-------------------------------------------------GTAGCAATAATACTGAGTA
CTGCTGGTTGTCCACCTGAGCACAAT------------------------------------------------------
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----------------------TAATATGATGGCTAGCAA-CGTACCGCAAACCCAATAATAACCCTGTTTGAAAATCTA
GAGTACTTCTACGCGTTATTTTGACCGCATGTGATTCCTCTGATGATCACTGGGTCCTTGTTTTGGTTAGGCAGCGCATA
AATGCTGCGCTCTTAAGTGCCTCAAATTAAGACTCCCCTCTCCTACCTACAACAAAACACC---TTTTTTGAGCAAAAGA
TGGGCCACCCCG-TCCGATTTCATATAATGAAACTAACCGGTTCAACTGCCAA-ACAACAAACC--ACAAGACAAAACAC
CTTGATGGCCCGTGTATAAATATTGTGTACATGACCCTCTTTCCACTCACCTANNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAGAAAAGAATCAAGATGGTTGACACACTGAGTGAA
GAGAACATCATTGGATACTTCAAGAACAAGAGCATCCTCATCACTGGATCAACAGGCTTTCTTGGAAAGAGTATGCA---
-----CGCATAATGTTTATACACACATATTACGCATGCATATACTATTT-GTTGCAAATTCGAGAAGTTTTTT---GCGT
CAAGTTCATATCTG----------------------------------------------------------CTGTGCTC
ATCTCTTAATGAGTTCTACTGTTGGTGTGCGTATATGCAGTACTGGTGGAGAAGATACTGAGAGTTCAACCTGATGTGAA
GAAGATCTACCTCCCGGTGCGAGCGGTGGATGCCGCGGCGGCAAAGCATCGGGTGGAGACTGAGGTAGTGTTGTCCGTCA
TGGTTCTTCATGATCTAGACCTCTACAGCT---CATCTCATGATTCTTTTGATCCCTTTGCTCGAGTGTTGGTGCTGAAT
AATCTCTTTTCTAT------------------------------GTGCCCAGGTGGTAGGGAAGGAGTTGTTCGGGCTTC
TGAGGGAGAAGCACGGGGACAGGTTTCAATCTTTCATCTGGGAAAAGATCGTCCCATTGGCCGGAGACGTGATGCGCGAG
GACTTCGGCGTCGACAGCGAGACCCTGAGGGAGCTCCGGGTGACCCAGGAGCTCGATGTCATCGTTAATGGCGCCGCCAC
CACCAACTTCTACGAAAGGTGCGTCATTGTCAACTGATTGTTTTGTCCAAGAAAGAAAAAAATATCAGCAGAGAACTTGA
GAGTAGGTGCAGCAAGAGTACGCG--------------------------------------------------------
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--------GTGAATGGTCTCTGAAAAACAGTTGTGT------------------GCGTGCAGGTATGATGTGGCTCTAGA
CGTGAACGTGATGGGAGTGAAGCATATGTGCAACTTCGCCAAGAAGTGCCCCAATCTCAAGGTGCTCCTCCATGTCTCCA
CGGGTACGTACACCAACTCTACAAGTAACCATTGACTATGAGTATGAACTTGGATGCTTTGG-------CAAAAAAAGGG
TTCTTGGATGTTAATTAAAGTACACCTAGATTTGATTTACAAATCAAGTTAATAAATCCATACATGAGTTGGTGCAGCTT
ACGTGGCGGGTGAGAAGCAAGGGCTGGTGCAAGAGAGACCATTCAAGAATGGCGAGACGCTGCTCGAGGGGACCCGCCTC
GACATCGACACTGAGCTGAAACTGGCCAAGGACCTGAAAAAGCAGCTTGAGGCCGACGTTGATTCGTCGCCCAAGGCCGA
AAGGAAGGCCATGAAGGATCTTGGCCTTACCAGGGCCCGGCACTTCAGGTGGCCAAACACATACGTGTTCACCAAGTCGA
TGGGGGAGATGGTGCTAAGCCAGTTGCAGTGTGATGTCCCCGTTGTCATCGTCCGTCCCAGCATCATCACAAGTGTCCAG
AACGACCCACTGCCCGGATGGATCGAAGGCACCAGGTTCATTAT----------------------------------A-
--------------------------ATTTAAAGTGCAGTCGTTTTAATCTATTGCGAATGCAATAAATAAAGGGATAAA
TGGTACTTGTTCAATGTAAAAAAATGTAAATTGCAGGACGATCGACACGATCGTGATCGGCTATGCGAAGCAGAACCTGA
CATACTTCTTGGCCGACCTCAACCTCACCATGGATGTGGTAAGCAATGTTGTACTATGCATGCAGTTAAG----ATATAT
TCCAG----GCAATGTTTGGTCGTTAGTCTAG-----GAATTCCTACAGTAATAATAAGAAAAAGGGTTTCCCCACTTAA
GATTATAAAGCAACATTTCAAAGTCGGTGGTGAGTGCAATCATTTGGTTGGGTATACATTGGTGCAGATGCCGGGCGACA
TGGTGGTGAATGCGATGATGGCGGCAATAGTGGCACACAGCTCGTCCTCATTGGAGAAGACAAAGTCACATCCCAAGCAA
CATGCACCGGCGGTGTACCACGTGAGCTCGTCGCTGCGTAATCCGGCACCATACAATGTGCTTCATGAGGCTGGGTTTCG
GTACTTCACGGAGCACCCTCGCGTGGGCCCTGACGGTCGCACCGTGCGTACCCATAAGATGACATTCCTCAGCAGCATGG
CTTCCTTCCACCTATTTATGATGCTCAGGTACCGCCTCCTCCTCGAGCTCCTCCACCTGCTCTCCATCCTCTGCTGCGGC
CTCTTCGGCCTCGACACCCTCTACCACGACCAAGCACGCAAGTACAGGTTAGTT----GGTTGAAATCTTTTGTGGTTT-
----------------------------------GTATCTTCTTGATGGCGCGGCACA---TAAGATGACACGGACTTTA
TTGTTATATTGTTATAGGTTCGTGATGCACCTGGTGGATCTGTACGGGCCCTTTGCGCTGTTCAAGGGGTGCTTCGATGA
CGTCAACCTAAACAAGCTCAGGCTCGCCATGACCAGCAACCATGGTAGCCTCTTCAATTTCGACCCGAAGACCATTGATT
GGGACGAGTACTTCTACAGGGTCCACATCCCCGGGGTCATAAAGTACATGCTCAAGTGAAATATCCGTGCACCGAAA-TT
CAGGCGTTGCCTTAATAATTAAATAATCGTACGATTGTAAGAAATGTCCTCCCAAATTGGGTTCTAACCGTTAAATAATC
TATATGAAAGAGGAAAATGTGTCTGTCGCTTGATAGAGCAGGCATCAACGTTGCATAAGTTTCTTGAAG-ACAAGGAATG
CTACATTATGTAGTCCCATTCTGGTTCATGTATTGTATTGCTAATTATGACTAGTATTGATTGTTGTTACCAATTTCTTG
TTCAGTCACATATGGTACCTTGACTAGCATTGATTGTTA---ATAATTTCTTCTCAAGAGAAATAAATATAGTGCTCCAA
GATTTGTGAATTATGCATAATCTCTTCAAGCGCTTCTCAGTGCAAAATGAATAAGGCAATCGATTAATAGTTGTGTAT-A
GACTTTGTTTAAATTGACGCATCTCCAGAATTAAAATCAAGATCGACCGCATCCATGAACCAGGTCACTATGCATACACA
TCTCACCAAAACATGCA---------------------------------------------------------------
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--------------------------------------------------------------------------------
---------------TACTAGTATCAATACAGTTATTCTAATACTTGGTAAATACAGTATAAAATAATAATACACTTTTG
TTTCAGTAAATATCAATCTGTTCCAGTAAAAGT-GTACTAATCAAAGTTGACACGAATTTTAATTTGACTAGACAATTTC
ACGTCAAGAAATCACAATAAATTGGTCCGGTAACCCAGCGGTCAGGGCCGCACACTCAAGCTGTACTCAGCATACAAGAT
AGGAAAAGAACATTGTCATC--------AGCATCATCAACAGAAAACAGATTGGCAACAGCTACATTTTTTTTAAAGAGA
AATTTCTCTGTTTTACATCACTTGATACATTTGGAGCAACGTTTATTATTCTGA-AAAAAAAATGAGATGATAAACACAT
ATTCATGTGCCATGTTCAGGAACTCTTTCTAGCTGC
>chr5A_584
TTAGGACGTCCTACT-----------------------------------------------------------------
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-----------------------------------------GACAACTCATTCCTAAGTGTGTAGCAATAATA-TGAGTA
CTTCTGGTTGCCCACCTTAGCT--ATTACTACCTCCGTCCTGGTTTACTAGCCCTCTTCTTATTCTGGTTTATATTTTGA
CCATGCTTTTAACTAATAAAATATATGTTATGCGTAGAAAAAATAATATCATTGAAAACTACATTCAAATATGAATCCAA
CAATATAATCTTTGATGACATGCATTAACATTTTGCTAGTTAAATATGTGGTCAAATTTAACTCAAAATACTATGGGGAC
TAGTAAACTAGGACAGAGATAGTAATTTGATGGCTAGCAAACGTACTGCAACCCCAATAATAGCCCTATTTGAAAATCTA
GAGTACTCCGACACAATATTTTGACTGCATGTGATTCCTCTTATGATCACTGAGTCTTTGTTTCGGTTGGACAGCGCATA
AATGTTGCGCTC--AAGTGCCTCAAATTAAGACACCCCTCTTCTACCTACAACACGAAAGACCCTTTTTTCTTAGCAAAA
-----------------ATTTCATACAATGAAACCAACTGGTTCAACTGCCAAAACAACAGACT--CCAAGACAAAACAC
CTTGATGGCCCGTGTATAAATATTGTGTACAGGAGCCTCTTTCCACTCACCTACACAAATCATCTCCTTCTTCCTCTCTC
TCTCTCTCTCTCCCTGCTCTCCCTGCTCTCTCTCTCTCTCTCTCTCTCTCTTGCGCACACAA---------------GA-
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-----------------------------------------------AAAAAAATCAAGATGGTTGACACACTGAGTGAA
GAGAAGATCATTGGATACTTCAAGAACAAGAGCATCCTCATCACTGGATCAACAGGCTTTCTTGGAAAGAGTATGCATGC
ATGCACGCATAATGTTTATACAAACATATTACGCATGCATATACTATTT-GTTGCAAATTCTAGAAGTTTTTTTTTGCGT
CAAGTTGATATGTG----------------------------------------------------------TTGTGCTC
ATCTGTTAATTAGTTCTACTGTTGGTGCA--TATGTGCAGTACTAGTGGAGAAGATACTGAGAGTTCAACCTGATGTAAA
GAAGATCTATCTCCCGGTGCGAGCGGTGGATGCCGCGGCGGCGAAGGATCGGGTGGAGACTGAGGTAGTGTTGTCCATCA
TGGTTCTTCATGATCTAGACCTCTACTGCT---C---TCATGATTCTTTTGATCCCTTTGCTTGAGTGTTGGTACTGAAT
AATTTATTTTCTAT------------------------------GTGCCCAGGTGGTAGGGAAGGAGTTGTTCGGGCTTC
TGAGGGAGAAGCACGGGGACTGGTTTCAATCTTTCATCTGTGAAAAGATCGTCCCATTGGCCGGAGATGTGATGCGTGAG
GACTTTGGCGTCGACAGCGAGACCCTGAGGGAGCTCCGGGTGACCCAGGAGCTCGATGTCATCGTTAATGGCGCCGCCAC
CACCAACTTCTACGAAAGGTGCGTCGTCGTCAACTGATTGTTTTGTCCAAGAAAGGAAAAAAAATCAGCAGAGAACTT--
GAGTAGGTGCAGCAAGAGTACGGAGTGGAA--------------------------------------------------
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------------------------------TTGTGT------------------GCGTGCAGGTATGATGTGGCCCTGGA
CGTGAACGTGATGGGAGTGAAGCATATGTGCAACTTCGCCAAGAAGTGCCCCAATCTCAAGGTGCTCCTCCATGTCTCCA
CGGGTACGTACACCAACTCTACAAATTACCATCATG---GACTATGAACTTGGATGCTTCTGGGGAAAACAAAAATGAAG
TTCTTGGATGT-AATTAAAGTACACCTAGATTTGATTTACAAATCAAGTTAATGAATTCATACATGAGTTGGTGCAGCTT
ATGTTGCGGGTGAGAAGCAAGGACTCGTGCAAGAGAGACCATTCAAGAATGGCGAGACGCTGCTCGAGGGGACCCACCTC
GATATCGACACCGAGCTGAAACTGGCCAAGGACCTGAAAAAGCAGCTTGAGGCCGACGCCGACTCGTCGCCCAAGTCCCA
AAGGAAGGCCATGAAGGACCTTGGCATCACCAGGGCCCGGCACTTCGGGTGGCCGAACACATACGTGTTCACCAAGTCGA
TGGGGGAGATGGTGCTGGGCCAGTTGAAGTGTGATCTCCCTGTTGTCATCGTCCGTCCCAGCATCATCACCAGTGTCCAG
AACGACCCACTGCCCGGATGGATCGAAGGCACCAGGTTCGTTATATGCTTCTCTTTCCTTTCCCTGCCTCT------AA-
--------------------------ATTTAAAGTGCAATCGTTTTAATCTGTTGCAAATGCAAGTAA-------ATAAA
GGATGTTTGTTCAATGT--AAAAATGTAAATTGCAGGACGATCGACACGATCGTGATCGGCTATGCGAAGCAGAACCTGA
CATACTTCTTGGCGGACCTCAACCTCACCATGGATGTGGTAAGCAACGTTGCACTATGCATGCAGTTAATTAACATATAT
TCCAGGCATGCAATGGTTGGTTGTCAGTCCAG-----GAATCCATACAGTAAGATATGG---------------------
--------------ATTTCAACGATGGCGGTGAATGCAATCGTGTGGTTGGGTATATGTTGGTGCAGATGCCGGGCGACA
TGGTGGTGAATGCGATGATGGCTGCCATCGTGGCGCACAGCTCGTCCTCATTGGAGAAGACACAGTCACATCCCGAGCCA
CACGCACCGGCGGTGTACCACGTGAGCTCGTCGCGGCGTAACCCGGCGCCGTACAATGTGCTGCACGAGGCTGGGTTTCG
GTACTTCACGGAGCACCCTCGGGTGGGCCCTGACGGCCGCACGGTGCGCACCCATAAGATGACATTCCTCAGCAGCATGG
CTTCCTTCCACCTCTTTATGATGCTCAGGTACCGCCTCCTCCTTGAGCTCCTCCACCTGCTCTCCGTCCTCTGTTGTGGC
CTCTTCGGCCTCGACACCCTCTACCACGACCAAGCACGCAAGTACAGGTTAGTC----GGTTTAAATCTTTTGCGGATGG
CATTTTTGATAACAAGTATTTCCGGACGGAGGGAGTATCTTCTTGATGGCGCGGCATA---TATGATGACACGGCCTTTA
TTGTTATATTGTTGTAGGTTCGTGATGCACCTGGTGGATCTGTATGGGCCCTTCGCGCTGTTCAAGGGCTGCTTCGATGA
CGTCAACCTAAACAAGCTCAGGCTTGCCATGACCAGCAACCATGGAAGCCTCTTTAATTTCGACCCCAAGACCATTGACT
GGGACGATTACTTCTACAGCGTCCACATCCCCGGGGTCCTAAAGCACATGCTCAACTGAAATATCCATGCACCGAAAATT
TAGGCGTTGCCTTAATAATTAAATAATCGTACG-TTGTAAGAAATATCCTCCCAAATTGGGTTCTAACCGTTAAATAATC
TGTGTGAAAGAGGGAAATGTGTCTGTCGCTTGATAGTGCAGGCATCAAC-TTGCATATGCTTCTTGAAGAACAAGGAATG
CTACATCATGTAGTTTCGTTCTGGCTCGTG--CTGTATTGCCAATTATGACTAGTATTGGTTGA---TAACAATTTCTTG
TTCAGTCACATATTGTACCTTGACTAGTATTGATTGTTAATTATAATTTCTTTTCAAGAGAAATAAATGTAGTGCTCCAA
GATTTGTGAATTATGCATAATCTTTTCAAGCGCTTCTCAGTTCAAAACGAATAAGCCAATCGATTAATATTTGTGTATTA
GACTTTGTTTAAATTGACGCATCTCCAGAATTAAAATCAAGATCGACCGCATCCATGAACCAGGTCACTATGCATACACA
TATCACCAAAACGTTCTACCATGCATGGGAAAATGTTTTTCATTCAATTTTTCTACTAATATTCAATAAATAGTGTTACA
ACTACGCATAATCAAATATAATAATTCATGTATTTTAAGTTTAGTTCTCATGTTATCAAGTCAAAATTTTATCAAACAAT
TCCAGCAGCAATGCATGGGGCCTCCTCTATTTTATATTGCACAAAAGTCAGACAGAACTCCTTCCGGTTTGGGTGTTCGG
CTGGGCTGGCAAGCCTTCCGTCAGT--------------------------------------CCTAGCCCAATAGCGAG
TTCGAGCACTCAGGTTTGCTGCCAATACTCCAGTTAATTCCGTAAATTTTGCTCAAAAAA---AGTAAATTCCGCAAATA
TAG-TATTAGATAAGTACTAGTACGTATA-----ATTCTAATACTTGGTAAATACAGTATAAAATAATAGTACACTTTTG
TTTCAGTAAATATCAATCTGTTTCAGTAAATGCCGTACTAATCAAAGTTGACACGAATTTTAATTTGGCTAGACAATTTC
ACGTCAAGAAATCACAATAAATTGGTTCAGTAACCCAGCGGTCAGGGCCGCACACTCAAGCTGTACTCAGCATACAAGAT
AGGAAAAGAACACTGCTTC-------------------------------------------------------------
--------------ACATCACTCGATACATTTGGAGTAACGTTTATTATTCTGAAAAAAGAAATCAGAGGATAAACACAT
ATTCTTGTGCCGTGTTCAGGAAGTCTCGCTAGCTGC
>chr5B_1057
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------CACGCACGCACACAGGAAAGGGGA-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------AAAAAAGGCGAGATGGTTAGCACACTGAATGAA
CAAAAGATCACCGAATACTTCAAGAACAAGAGCATCCTCGTCACTGGATCAACAGGCTTTCTTGGAAAGAGTAAGCATGC
ATACACTA---------------------------------------TTTGTTGCAAATTCTAGAAGAGTAAACTCCTCT
TTCACGTAAAATTTATGTGTCGCGGGTGTCGTTTACTCATTCAAGACCAAATCATGCTGGACTACCGTTGCATTGTGCTC
ATGTGTTAATTTGTTCTTGTCTCGGTTCA--TATACGCAGTACTGGTGGAGAAGATACTAAGAGTTCAGCCTGATGTGAA
GAAGATCTATCTTCCCGTGCGAGCGGTGGATGCTGCGGCGGCGAAGCATCGGGTGGAGAATGAGGTAGCGTTGTCCATTA
TGGTTCTGCATGATCTAGCCCTCTACTCCTGAACCTCTTTTGATTATTTTCTTCCCGACTAGTTAAACATGCACTCGCAG
AACAGTCAAACCCCGTGAAATTAAGCTGATACGTAGAAATGATCATGCGCAGGTAGTAGGGAAGGAGTTGTTCGGGCTTC
TGAGGGAGAAGCACGGCGACGGGTTTAAATCTTTCATCCAAGAGAAGATTGTCCCGTTGGCGGGAGACGTGATGGGCGAG
GACTTCGGCATCGACCCTGAGACTCTGAAGGAGCTCCGATTGACCGAGGAGCTCGAGGTCATCGTTAATGGTGCTGCCAC
AACCAACTTCTACGAAAGGTACGTTGTCGTCAATTGAATGTTTTGCCCGAGAAAAACCGGAC-----GGAGAGAACGT--
GTCCAGGTGCAGCATCATCGATCAAAGTTTGACCACAAGAGTTCTTTTTTCCTAAACGAAGACACAAGTGTGGCCTCATC
AATTAATTAAGAAGATAATTGCCTAGACTAGTAAATTTATGAAAAACCGGGCAAAAAGGATACTATACAAGCAATCCAAA
AACGGCATAAAAAGCCCGTGACCCGCCTCGGGAGACAAAGACGGCGAAGAGGAACCGGGAGACGAGGCGGCGTCGAGGCT
GGCGTGGAAGAGGGCGCCGCGGGGTACCCGGATCCGGTCAGAGCGGCCACAACGGAGGACGGAGGCCGGAGCCCGGAGAT
CCGGGCGATGGCGGCGAGCGGCCAGCCGGCACTTACGCGGACGTGAGAGGCCATTCCGTCCCAACTCTGGACGCCGAGCC
GAGCCGAGCCGAGCACGAAGAGAGAGGGCCGGCAGGGGACTCCGGATCTGGCCTGGGCAGCTGCAGAGCAAGCCGGAGAA
GGGAGATCGAGGCGCTGCCGCCGGGGGCGCTCACCCGACGCGGGAGCCCATCCTCGTGTCGTGTGGTTCCCCCTTGATCA
CAAGAGTCGTGAATGGTCTCCAAAGAACTAAGTAATATAAGTGCGTGTGTGCGCGCGTGCAGGTATGATGTGGCTCTGGA
CGTGAACGTGATGGGAGTGAAGCATATGTGCAACTTCGCCAAGAAGTGTCCCAACCTCAAGGTGCTCCTCCATGTCTCCA
CAGGTATGTGCATCAACTGTACAAATTACCATTGGTTATGC------------------------------------AAG
TTCATGGATACAAATTAAACTAGTCCGAGACTGGATTCACAAATTAGGTTACTAATAAA-------------TGCAGCAT
ACGTGGCGGGTGAGAAGCAAGGGCTGGTGGAGGAGAGGCCGTTCGATGAAGGCGAGACACTCCTTGAGGGGACCCACCTT
GACATCAACACTGAGTTCAGGCTGGCCAGCGACCTGAAAAAACAACTTCAGGCCGACGATGACTCGTCGTCAAAGGCCAA
AAGGAAGGCCATGAAAGATCTCGGCCTCGCCAGGGCCCGACACTTTGGGTGGCCCAACACATACGTTTTCACCAAATCGA
TGGGGGAGATGGTGTTGGGTCAGATGCAGGGTGATGTCCCCATTGTCATCGTTCGTCCTAGCATCATCACTAGCGTCCAG
AATGACCCACTGCCCGGATGGATAGAGGGCACCAGGTTCTTATGAG--------TTTCTTTCACTGTCTCTAGCTTCAA-
--------------------------ATTTAAAACGCCGTCTTTTAAATTTGTTGCAATTGCAAAATATATTGC------
-GATATTTGTTCAGCAG--AAAAATGTAAATTGCAGGACGATCGACACGATAGTGATCGGCTATGCCAAGCAGAACTTGA
CATACTTCTTGGCCGACCTCGACCTTACCATGGATGTGGTAAGCAAAGTTGTACAGTGCACTAATGATATTTTCGTATGC
ATTTTTTATGCTA---------------CGAGTCTAGGAGAACCTGTAGCAAGATG------------------------
-------------CATTTGAACGGCAGTGGCGAACGCATTCGATTGGTTGGGTATATGTTGCTGCAGATTCCCGGTGACA
TGGTGGTGAACGCGATCATAGCTGCCATTGTGATGCACGCCTCGTCCTCGTTTGAGAAGATAATGGCCCATCCCAAGCCA
CGGCCACCGGCGGTGTACCACGTGACCTCATCATTGCGTCACCCGGTGTCATACAATGTGTTGCATGAGGCGGGATTCCG
GTACTTCACAGAGAACCCTCGTATGGGCCCTGATGGTCGCCCTGTGCACACCCATAAGATGTCGTTCCTGAGGAGCATCG
CCTCCTTCCAACTCTTTATGGTTCTCAGGTACCGCCTCTTCCTTGAGCTCCTACATCTGCTCTCCATCATTTGTTGTGGC
CTCTTCGGCCTCGGTACTCTCTATCACGACCACGCATGCAAGTACAGGTTAGTCA-----TTAAACTTGTGTGCAG-TT-
----------------------------------GTACTATCTTGATGATGTGGCACA---TAAGATGACATGATTTTTT
TTGTTT--TTGTTATAGGTTTGTGATGCAGCTTGTTGACTTGTATGGCCCCTTCGCGTTGTTCAAGGGGTGTTTTGATGA
TGTGAACCTACACAAGCTTAGGCTCACCATGGCCGACGATCATGCCAGCCTCTTCAATTTTGACCCGAAGACCATTGACT
GGGATGACTACTTTTACAGGGTCCACATCCCCGGGGTCATAAAGTACCTGGTCAAGTGAAATATCTAGGCATTGATA-TT
CAGATGTTGCCTTAACTAAATAAA--------------------------------------------------------
--------------------------------------------------------------------------------
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------------------------------------
>SNPs
-----S-----------------------S--S----S------------------------------------------
-------------------------SSSS---------------------------------------------------
S------------------S--------S-------S-----------S----------------S-----S--------
---------------S-S----S----S--S-------------------------SSSSSSSSSSSSSSSS--------
------------S---------------------S-S--------------S------------------------SS--
S--------------SSS----------SS--------SS--------------------SS------------------
-S---------S-SS-SSSSS--SSSSSS--SS-SS-S-SSSSSSSSS--SSSSS--SSS-S--S---SSSS-SSSSSSS
SSSSSSS--S-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSS---------------------------------------
--S-S----------S----------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------S----------------------------------S--------SS----------------------------
---------------------------------------------------------------S----------------
S--SS-SS---SS-----------------------------------------SS-----SSSSS----S--S------
---S-----------------------------------------------S----------------SS----------
---------------------------------------------------SS-------------S--S-S-SS-----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------S-------------------------S----S-S---------------------------
----------------------------------------------------------------------------S---
--------------------------------------------------S-----------------------------
------------------------------------S-------------------------------------------
-----------------S---SS-SSS------------------------------------S------S-S-----S-
-------------------------------------------------------------------S------------
--------------------------------------S-----------------------------------------
------------------------S----------------------S--------------------------------
--------------------------------------------------------------------------------
----------------------S-SSSS----------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------S--------S--------------------------------------------------
------------------S-----------------------------------------------------S--S----
--------------------------------------------------------------------------------
-----------------S-S------------------------S-----------------S-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------------------S
SSSSSSSSSSSSSSSSSSSSSSSSSS-----S-----------S---S--------------S----S-----SS-S-S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----------------------------------S--------S------------------------------------
-------------S-----S------S-------S-----------------------------S---------------
---------------S-------------------------------------------------S--S-----------
--------------------S-----------------------------------------------------------
----------------------------------------------S-------------------------------S-
--------------------------------------------------------------------------------
-------------------------------------------------------SSS----------------------
--------------------------------------------------S-SSSSSSSSS-------------------
-----S--------------------------------------------------------------------------
---------------S--S-------------------------------------------------------------
----------S---------------------------------------------------------------------
--------------S-----------------------------------------------------------------
--------------------------------------------------------------------------------
----------------S-----S--------------------S------------------------------------
-----------S--------------------------------------------------------------------
--------------------------S--------------------------SS--------S----------------
------------------------------------------S----S--S----------------S------------
---------------------------------------------------------S--------------S-------
----SSS-------------S--------S--------S--------------------S-S------------------
-S-S----------S------S---------------------------------------------------S------
----SSS-S-SSS-SSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-----------------
---------------------SSS----------------S------------S------SSS--------SS-S-----
S--S----S-----------------------------------------------------------------------
---------------------------------S--------------------------S-------------------
-------------------------------------S-------------------------------S----------
-------S---S--------SSSSSSSS------------------------------S-S-------SSSSS-S-----
-----------------------------------------------------S---SS---S-----------------
------------------------------------
>forward_106
--------------------------------------------------------------------------------
------GTCGGTCAGGTACGTAGCAA------------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_3070
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-----------------------------CTTGTGTGCGTGCAGGTATG-------------------------------
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------------------------------------
>forward_1252
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--------------------------------GACCCTCTTTCCACTCACCC----------------------------
--------------------------------------------------------------------------------
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>reverse_4100
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-------------------GACGACGATGGTGAAAGCAA-----------------------------------------
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>forward_4044
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------------------------CAGTCCAGTCCAGGAATCCG------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------
>reverse_5663
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--------------------------------------------------------------GCCTAGCCCAATAGCGAG
TT------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------------------------
