>input_sequence_28019
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--------------------ATGCCGAAATCCAAGCGCAATCGCTCAGGTCAGTTCACTCGCTCTGTTCCGCTGCCCTCA
ATCCCCCCCTCCTGCCTCTACCCGCTTCCTTTTCCGTCTCCTGGATTCGACCAAGTTTGGCTGACCAAACTTGTGTATCT
GGATTAGTTCCAACAGCCAATGGTGCTCATATGGAACCTAAATATGTGCTGAACTGCTAGGCAAGAATTGAAACCCAAGT
TTCGGCGAGCGACGATGTCATTTTTCTTTTCTTGTTTTGTCGTCTCATGCTCGAAATTTGGATGTTTTGATGATGGGCGC
AGTCACCCTGTCAAAGACCAAGAAGAAGCCGGGGCTAGAGCGGAAGGGCAAGGTGGTCACGGAGATCAAAGACGCGATTG
AGCGCCACAGCAGCGCCTATGTCTTCACCTACAACAACATGAGGAACCAGAAGCTCAAGGACCTCAGGGACCAACTCAAG
TCCTCTAGCCGGTAGGTTCCCCTCTTTATTTG---CTAC-----------------------------------------
------------------------------------------TACTAGTTATCTCTTATGCTGTGTTCAAGTCCTCTATC
CAAGAGCAATTCGGAATATGGTTGGTTTTCAACCTTTTCCTAAACAACAATGACATGTTTGCAAATGCT-TTTTGGCTTG
AATCAACACAATTTGCTTCAGCTCGTTGGTGCATGCTGCTTTGTTTTGCTGGACAGTGCCTTGAAACCCTGATAAAGTGA
CAGGTCACAACTATGGTGCATATAGAACACACACCATGCTAGTTAGTGCTTAAGCTTTACTGGTGGTTTATGCTGCAAAA
TTTGTAGGCCAATTTTATAACTTGTAAGTATTGTTTTTTTTCTCAGGATATTCCTTGCTGGAAAGAAGGTCATGCAGATA
GCATTGGGGCGGTCACCTGCTGATGAAGCTAAGACAGGCCTGCATAAACTCTCCAAGGTGATTCATCCTTTGCCACTGTT
A------------TAAGTGTAATCCACACCATTCTTGTGAGGTTTTTGCTGACAGCAATTTTTCTCTATC--TAGTTCCT
TCAAGGTGCTTCTGGATTGTTATTTACAAATCTCCCAAGGGATGATGTCGAGAGGTAGCCCTGTCTTATAGTT-TTTAGC
TTTGCACATTATTGCTAATGCTTGCTTACATACTTGGTGTGGCTCTAGTAAAGTTATGATCATAAATCCTGTGTGCAGAT
TATTCCGAGAATTTGAGGCGAATGATTTTGCGAGGACAGGAAGTATTGCGACTCAAACGGTATTACTTTTGCTTCCATGT
TCATGGACTC-TGGTCAAGCTTTTAGTTCGGTTAGACAATGATAAG------------------------------CT--
----------------------------GGTAGGACTCCCTCTGTTCTGATATAGAGAGTACTTATTTTGCAAATCCTGA
CAGGCCTAAAGGGTGCAATCGTTCGAATCTTACCCCTAATTAAATGTTGGTCTTCCTAAAGCAGACACATGTTATGCTGG
CCTTTCTTGCTGCAGATTGTGGGGAGATGGGAAATCTAGAAGTAACTGCATGATAATTCTGGGGATTAAGTTATTGCGCC
AGTTTTCCTGACGCCGCATCGGTTCATGCAAAAACTTTGTAACAGCTGGTGTGGGTATTTTTGGTAGAATTGGCATGAGA
TTGATGGGATGCCTTCTATTAGTAATTGCATGAAAAAAATTACATGCCCTATAACA----------CGGAACAGAGGGAG
TATGACTTTGTGAAATGAAGGTCGACATCCTTCCTGTGTAGATTCACTTTAGCGATTACCCATTGGTAAAAACTG-TTTA
TGCCCTGGATAGGGTATAACAATGAGTGTTAGTCTGAAGTTGTGTTATTCTTCTGTTAAATAGCACTAGTGGTTTCTTGT
ATGAGTTGGCTATAACAAACTCTGGAACTTTTTGATGCCTCAGGTTGAGCTAAAGGAAGGCCCTCTGGAACAGTTTTCAC
ATGAAATGGAACCCTTTCTGCGCAAACAAGGACTGCCAGTTCGCCTAAACAAAGGTTTGTAGTTCCCTTGCACTCAGGTG
CTTGAAGCTACCAAGCAAAATGGTTGGAACTAATAAAGTTGACCGTTGTTGGTGCAGGTGTTGTTGAATTGGTTGCAGAT
CATGTAGTATGTGAAGAAGGAAAGCCCCTTTCACCAGAAGCAGCACACACTCTGGTATGCAT-GGGATATTGTGCAGTGT
TACCGACATATTAGTTC----AAAAAATAACAAGACAGATACTGAT------------------CATGTGCCTATGGGAA
GCAGCAGTATAGTTTCCCAGTAATGCCATATG--TTAGCTAGGTTTGGCA-------------AAACATAGAGGCAGATT
GTTCACTTGATAGAGCTTCATATAGTACTTCATTGGTCTGTCCCAGAATACTGATCATGTGCCTATGGGAAGCAGCAGTA
TAGTTCCCCAGTAATGCCATATGTTAGCTAGGTTTGGCAAAACATAGAGGCAGATTGTTCATTGTTCACTTGATGGAGTT
TCATATAGTACTTCATTGGTCTGTTCCAGAAT------ACCACATTTTAATCCTTGATAACACTCTGGAAGCATGTCTAC
CCTTGTTGTGCAAACTGTCGATCTGTTTCTTTGCACTGAGACCCATTTGATTTCCTTGTGGCAGCGCGTGCTTGGGACGA
AGATGGCGACGTTCCGACTGTACCTTGTCTGCCGCTGGTCGTCCGATGACTTTGAAGTGTACAAGGAAGGCTTGGCGCAC
CTGGGAGGTGAGGAAGCTGACGAGTCTTCTTAAGGTTGTTGGATTATCATGGTGGCGTGCTTGTTGTCTAGCTGTGTTCA
GACGGTTTTGTGCCATGCCTTTGTACCCTTAATTCGACAGGAATCTCAAATATATGA-----------------------
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------------------
>chr5D_1_TraesCS5D01G158600
TTTTTTGTGAATGAATTAATTTATACTACTATTAACCTTGGGCATTTGAATGTGGATCAGACCCACAAGCTAAAAAAAGG
CATATGTGGTTTTAGTGATTCACATGATATATATACAAAGAAACAGGAGAGCGGACAGGTTTATGTTGTTTCTAACTGGT
AGGTCTTAGCAATCAACTGTACAAATGCTACGTGTCTCACCTGGCTGTAGCCCCGAATCGATTAAAACCGACCATGATTA
AAATTTCTTGA-------------------------------------------------------GTACATGTTAAAAA
AATTTCAAATACGCATTCAAATATTTTGTTGAATGATATGAAACATTTTTCTTTAACTATGCGACGCCTTTTTACATTGT
ATAAACATTTTTTATAAATGTCATAAACAAATTTTTGAAACATGTCGACACTTTTAAATGTGTGGTACGTCTTTGTTGAT
AGTACAAAACATGGTTTAATTACACAATTTTTTTTGACATTGTATAGCATTTTTCAAAAATATGACATGCATTTTTTGAA
ACCCATGAACATTTACTAAATGTCACATACAATACAATCTTTTAGTGGTATAAACATTCTCTAAAAGTTTAGCGAACATT
TTTTTTACACCACATGAACATTTTTAAAATATGGATGAACACTTGAAAAAACGGTAACCTTTGTAATATATGTATTTTGT
ATTTTTCAAAATAAAATAAACAAAATTAAAGAAAAAAACGTGCGTGACATCAACATGACAAGCCCACATGGCTGCTAGA-
---CATGAAATTTTGTTCGTAAGGATTAATGGGCCAGGCTAAGTGCGAATGGGACAGTCGGGCTCTCTACTAGGCCTGTT
ATAGTCCAACTCCGGCCAGGCCTGCGGTCTCTCCCCTTCGTCGAGCGGCGCAGCACAAAACAAAAGCCGAGGCAGGACAA
GAGAGCGAACCCTCTCTAAACCCTAGAA-ACTTAGGCACCGCCCGCCGCCGCCGCTGCTCCCAGGACAGCAGCCAAGGAA
GACGAAACCAAGCCTCCGCCATGCCGAAATCCAAGCGCAATCGCTCAGGTCAGTTCACTCGCTCTGTTCCGCTGCCCTCA
ATCCCCCCCTCCTGCCTCTACCCGCTTCCTTTTCCGTCTCCTGGATTCGACCAAGTTTGGCTGACCAAACTTGTGTATCT
GGATTAGTTCCAACAGCCAATGGTGCTCATATGGAACCTAAATATGTGCTGAACTGCTAGGCAAGAATTGAAACCCAAGT
TTCGGCGAGCGACGATGTCATTTTTCTTTTCTTGTTTTGTCGTCTCATGCTCGAAATTTGGATGTTTTGATGATGGGCGC
AGTCACCCTGTCAAAGACCAAGAAGAAGCCGGGGCTAGAGCGGAAGGGCAAGGTGGTCACGGAGATCAAAGACGCGATTG
AGCGCCACAGCAGCGCCTATGTCTTCACCTACAACAACATGAGGAACCAGAAGCTCAAGGACCTCAGGGACCAACTCAAG
TCCTCTAGCCGGTAGGTTCCCCTCTTTATTTG---CTAC-----------------------------------------
------------------------------------------TACTAGTTATCTCTTATGCTGTGTTCAAGTCCTCTATC
CAAGAGCAATTCGGAATATGGTTGGTTTTCAACCTTTTCCTAAACAACAATGACATGTTTGCAAATGCT-TTTTGGCTTG
AATCAACACAATTTGCTTCAGCTCGTTGGTGCATGCTGCTTTGTTTTGCTGGACAGTGCCTTGAAACCCTGATAAAGTGA
CAGGTCACAACTATGGTGCATATAGAACACACACCATGCTAGTTAGTGCTTAAGCTTTACTGGTGGTTTATGCTGCAAAA
TTTGTAGGCCAATTTTATAACTTGTAAGTATTGTTTTTTTTCTCAGGATATTCCTTGCTGGAAAGAAGGTCATGCAGATA
GCATTGGGGCGGTCACCTGCTGATGAAGCTAAGACAGGCCTGCATAAACTCTCCAAGGTGATTCATCCTTTGCCACTGTT
A------------TAAGTGTAATCCACACCATTCTTGTGAGGTTTTTGCTGACAGCAATTTTTCTCTATC--TAGTTCCT
TCAAGGTGCTTCTGGATTGTTATTTACAAATCTCCCAAGGGATGATGTCGAGAGGTAGCCCTGTCTTATAGTT-TTTAGC
TTTGCACATTATTGCTAATGCTTGCTTACATACTTGGTGTGGCTCTAGTAAAGTTATGATCATAAATCCTGTGTGCAGAT
TATTCCGAGAATTTGAGGCGAATGATTTTGCGAGGACAGGAAGTATTGCGACTCAAACGGTATTACTTTTGCTTCCATGT
TCATGGACTC-TGGTCAAGCTTTTAGTTCGGTTAGACAATGATAAG------------------------------CT--
----------------------------GGTAGGACTCCCTCTGTTCTGATATAGAGAGTACTTATTTTGCAAATCCTGA
CAGGCCTAAAGGGTGCAATCGTTCGAATCTTACCCCTAATTAAATGTTGGTCTTCCTAAAGCAGACACATGTTATGCTGG
CCTTTCTTGCTGCAGATTGTGGGGAGATGGGAAATCTAGAAGTAACTGCATGATAATTCTGGGGATTAAGTTATTGCGCC
AGTTTTCCTGACGCCGCATCGGTTCATGCAAAAACTTTGTAACAGCTGGTGTGGGTATTTTTGGTAGAATTGGCATGAGA
TTGATGGGATGCCTTCTATTAGTAATTGCATGAAAAAAATTACATGCCCTATAACA----------CGGAACAGAGGGAG
TATGACTTTGTGAAATGAAGGTCGACATCCTTCCTGTGTAGATTCACTTTAGCGATTACCCATTGGTAAAAACTG-TTTA
TGCCCTGGATAGGGTATAACAATGAGTGTTAGTCTGAAGTTGTGTTATTCTTCTGTTAAATAGCACTAGTGGTTTCTTGT
ATGAGTTGGCTATAACAAACTCTGGAACTTTTTGATGCCTCAGGTTGAGCTAAAGGAAGGCCCTCTGGAACAGTTTTCAC
ATGAAATGGAACCCTTTCTGCGCAAACAAGGACTGCCAGTTCGCCTAAACAAAGGTTTGTAGTTCCCTTGCACTCAGGTG
CTTGAAGCTACCAAGCAAAATGGTTGGAACTAATAAAGTTGACCGTTGTTGGTGCAGGTGTTGTTGAATTGGTTGCAGAT
CATGTAGTATGTGAAGAAGGAAAGCCCCTTTCACCAGAAGCAGCACACACTCTGGTATGCAT-GGGATATTGTGCAGTGT
TACCGACATATTAGTTC----AAAAAATAACAAGACAGATACTGAT------------------CATGTGCCTATGGGAA
GCAGCAGTATAGTTTCCCAGTAATGCCATATG--TTAGCTAGGTTTGGCA-------------AAACATAGAGGCAGATT
GTTCACTTGATAGAGCTTCATATAGTACTTCATTGGTCTGTCCCAGAATACTGATCATGTGCCTATGGGAAGCAGCAGTA
TAGTTCCCCAGTAATGCCATATGTTAGCTAGGTTTGGCAAAACATAGAGGCAGATTGTTCATTGTTCACTTGATGGAGTT
TCATATAGTACTTCATTGGTCTGTTCCAGAAT------ACCACATTTTAATCCTTGATAACACTCTGGAAGCATGTCTAC
CCTTGTTGTGCAAACTGTCGATCTGTTTCTTTGCACTGAGACCCATTTGATTTCCTTGTGGCAGCGCGTGCTTGGGACGA
AGATGGCGACGTTCCGACTGTACCTTGTCTGCCGCTGGTCGTCCGATGACTTTGAAGTGTACAAGGAAGGCTTGGCGCAC
CTGGGAGGTGAGGAAGCTGACGAGTCTTCTTAAGGTTGTTGGATTATCATGGTGGCGTGCTTGTTGTCTAGCTGTGTTCA
GACGGTTTTGTGCCATGCCTTTGTACCCTTAATTCGACAGGAATCTCAAATATATGATCTGACCCAGTTGGGCATATTGT
TGAGTGCCAGTATTTTTGCGAGCTACTATTATAGGTTGATCTTCTTCCTTGGCC-TCTTCTCCGTTGTACTCCCTCCGTA
AACTAATATGTTGCGCCTATACTTGTGCTGCAAGTGGTTCGGCTCAAGGCTGCTGGTGGATCCGTCCCTCTGATGTTTGT
GTTGCAGTCGCGGTGGTCTAGTCGAGTTGGGTCCTGTTGTTATGCAACCATGTTAGCAACAACCATGTTTCAAGTTTTGC
AGTGGACAGTTCTCGCTTCAATGCCTTGTGTTGTATCTTTTGCTCTAGTCTAGGTTGGGTTCGGTGTTTTCCTTCTCGTG
GATCTTAGAAAAGGCACCCAAAGGGCATTGTTATTTCTGATTATTATGAATACAATCGAAGGACAACAAGACACAGAATG
ACATGTAAAAAATAAAATTACATCGAAAACCATACCGGCTCTCTTAGTCGTCCCTCGGAGCTTGAAAATACAACGAACGG
GCAGTAGGTATAGGGGCACCTGTAAACATCCTCGCCATACAAGGTTTCCAATACCGCAATAGTCACTGGCTGGTAACAAC
GAGATCCAGTAACTCTTGAAAGAACATCAACTGGGACAGCACCCCACAGCGTAGGCCACCGATCCAGAGAATGATGGGCT
AATGCACTACGCCGCGCCATAACGTGATGATGGTGACAGAGCTATGCTAAACCCTTCTTTCCTTGAGCGCGCGCTCCTCT
CTCTCTCTCTCTCTCTCCTGCGTGTACCCTCATCACGCCGCCGTCAGCGTCTCCTGCGGCATCGACGTCAGTCAGGGAGG
CGGGCGTCCGCTGAACCAGTGGTGGAGCTTAGTGGAGATCAACCTGGGCCATCGCCCCCCTGCCCAGGAGATTTGTTCAT
ATTATCATGAGTAAATTGCCCATAGATTCATAGAAATCTAGCCTCAACTCGATGTTGGTTGCCCCCTAGCCCATTTGCCC
CTCTTAAGATGTGTCCCA
>chr5A_164
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
---TCTTAGCAATCAACTGTACAAATGCTACTTGCCTTGCTTGGCTGTAGCTCCAAATCGATTAAAACAGACCATGATTA
AATGTTTTTTGAATACTCCCTTCGTCCCATAATATAAGAGCGTTTTTGACAAATGAAACGGAGGATGTACATGTTAAACA
TTTTCCAAACACACATTCATATTTTTTTTCGAATGATACGAACA--TTTTTTTAAACTATATGACGCTTTTTTACATTGT
ATAAATATA-TTTATAAATTTAACAAACATATTTTTGAAAGTTGTCAACATTTTCTTAAATGTAACTTACACGTTGTTTG
AATGGCATGAAACATTTTTAATTGCAAGATTTTTTTACATTGTATACATTTTTTCAACAATATTACATGCATATTTTGAA
ATACGTGAGCATTTTTTGAATGTTGCATACAATTTATTTGAA---TGGTACAGACATTCTCTAAAATTTGGGAGAACATT
TTTT--ACACTGCATTAATATTTTTTAGATGTAAATGAACGCTTTTAATAAAT-TAACCTTCGTAATATGTGTATTTAGT
ATTTTTCAAATTA---TAAAAGCAATTGAAGAAAAAACACTTGATTAATATTTGACGAGGCACTGTCTCGCAAGAAGCGA
GACCAAGAAAATTTGTTCGTAAAAGATTGATGGCCAGGCTAAGTGCGAATGGGATAGTAAGGC-CTCTACTAGGCCTGTT
CTAGTCCAAATCAGGCCTGGCCTGCGGCCTCTCCCCTTCGTCGAGCGGCGCAACACAAAACAAAAGCCGAGGCAGGACGA
GAGAGCGAACCCTCTCTAAACCCTAGAACACTTAGGCACAG-CCGCCGCCGCCGCGGCTCCCAGGACAGCAGCCAAGGAA
GAGGAAGCCAAGCCTCCGCCATGCCGAAATCCAAGCGCAATCGCTCAGGTCAGTTCACTCGCTCCGTTCGGCTGCCCTCA
ATCCCCCCCTCC-GCCTCTGCCCGCTTCCTTCTCCGTCTCCTGGATTCAAAAAAGTTTGGCTGTTCAAACTTGTGTCTCT
GGATTAGTTCCAACAAGCAGTGGTGTTCATATGGAACCTAAATATGTGCTAAACTGCTAATCAAGAACTGAAACCCAAAT
TTCGGCGAGCAACGATGCCATTTTTCTGTCCTTGTTTTATCGTCTCATGCTCAAAATCTTGATGTTT-GATGATGGTCGC
AGTCACCTTGTCCAAGACCAAGAAGAAGCCTGGTCTAGAGCGTAAGGGCAAGGTGGTCACGGAGATCAAAGACGCGATTG
AGCGCCACAGCAGCGCCTATGTCTTCACCTTCAACAATATGAGGAATCAGAAGCTCAAGGACCTCAGGGACCAACTTAAA
TCCTCTAGCCGGTAGGTTCCACTCTTTATTTATTACTAGTACTCCCTCTGTAAAGAAATATAAGAGTGTTTAGATTGCTA
CTTTAGTGACCTAAACGCTCTTGTATTTCTTTACCGAGGGAGTATTAGTTATCTGCTATGTTGTTTGCAAGTCCTCTGTC
CAAGAGCAATTTACAATATGGTTGGTTTTGAACCTTTTCTTAAACAACAATGACATGTTTGCAAATGTTATTTTGGCTTG
AATCAACACAATTTACTTGAGCTCGTTGATGCATGCTGCTTTGTTTTGCTGGACAGTACCTTCAAACCCTGATAAAGTGA
CAAGTCACAACTATGGTG-----------------------GTTAATGC-TAAGCTTTACTGGCAGTTGATGCTGCAAAA
TTTGTAGACCAATTTTATAACTTCTAAGTATTG--TTTTTTCTCAGGATATTCCTTGCTGGAAAGAAGGTCATGCAGATA
GCATTGGGGCGGTCACCTGCTGATGAAGCTAAGACAGGCCTGCATAAACTCTCCAAGGTGATTCATCCTTTGCCAGTGTT
TGGTAGATACTGTTAAGTGTAATCCACACCATTCTTGTTAGGTTTTTGCTGACAGCTACTTATCTGTATC--TAGTTCCT
TCAAGGTGCTTCTGGATTGTTATTTACAAATCTCCCAAGGGATGATGTTGAGAGGTAGCACTATCTTATAGTTCTTTTGC
TTTGCACAGTATTGCTAATGCTTGCTTACATATGTGGTGCGGCTCTGGTAAAGTTATGATCATAAATCATGTGTGCAGAT
TATTCCGAGAATTTGAGGCGAATGATTTTGCGAGGACAGGAAGTATTGCGACTCAAACGGTATTACTTCTGCTTCCATGT
TCAAGGACTCATGGTCAAGCTTTTAGTTTGGTTAAAAAATGTTCAG------------------------------CTAT
TAGTAATTCTGGATATGTAATTAGTACTGGTAGTAGTCCCTCTGTTCTGATATAGGGAGTACTTATTTTGCAAAACCTGA
CCGGCCT--AGGGTGCAATCGTTCCTTTCTTACTCCTAATTAAATGTTGGTCTTCCTAAAGCAGACACACATTATGCTGG
CCTTTCTTGCTGCAGATTGTGGGGAGATGGCAAATGTAGAAGTAACTGCATGACAATTTTGGGGATTAAGTTATTGTGCC
AGTTTTCCTGACGCTGCATCGGTGCATGCAATAACTTTGTAACAGCTG---TGGGTATTTTCGGTAGAATTGGCGTGAGA
TTGATGGGATGCCTTCTATTAGTAATTGCATGAAAAAAATTACATGCCCTATCCCCCATCAGTATTCGGAACAGATGGAG
TATGACTTTGTGAAATGAAGGTCGACATCCTTCCTGTGTAGGTTCACTTTAGTGATTACCCATTGATAAAAACTGTTTTA
TGCCCTGGATAGGGTATAACAATGAGTGTTAGTCTGAAGTTGTGTTATTCTTCTATTAAATAGCACTTGTGGTTTCTTGT
ATGAGTTGGCTAACA-AAACTCTGTAACTTTTTGATGCCTCAGGTTGAGCTAAAGGAAGGCCCTCTGGAACAGTTTTCAC
ATGAAATGGAACCCTTTCTGCGCAAACAAGGACTGCCAGTTCGTCTAAACAAAGGTTTGTAATTCCCTTGCACTCAGGTG
CTTGAAGCTACCAAGCAAAATGGTTGGAACTAATAAAGTTGACCATTGTTGGTGCAGGTGTTGTTGAATTGGTTGCAGAT
CATGTAGTATGTGAAGAAGGGAAGCCCCTTTCACCAGAAGCAGCACACACTCTGGTATGAATGGGCATATTGTGCAGCGT
TACCGACATATTAGTTT---AAAAAAATAACAAGACAGATACTGAT------------------CAGCCAC----GGGAA
GCAGCAGTATAGTTTCCCAGTAATAGCATGTTAATTAGCTAGGTTTGGCA-------------AAACACATAGGCAGATG
G--------GTACAGAGTTTTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------TACTTCATTAGGGTGTTCCAGGCTTCTATCACCACATTTTTATCCTTAATAGCACT--GGAAGCATGTCTCC
CC---TTGTGCAAGCTGTTGATCTCTTTCTTTGCACTGAGACCCAATTGATTTCTTTGTGGCAGCGCGTGCTTGGGAGGA
AGATGGCGACGTTCCGACTGTACCTTGTCTGCCGCTGGTCGTCCGATGACTTTGAAGTGTACAAGGAAGGCTTGGCGCAC
CTGGGAGGTGAGGAAGCTGACGAGTCTTCTTAAGGTTGTTGGAT---CATGGTTGTGTGCTTGTTGTCTAGCTGTGTTCA
GACGGTTTTGTGCCATGCCTTTGTACCCTTAATTTGACAAGAATCTCAAATATATGATCTGACCCAGTTGGGCATATTGT
CGAGTGCAGGTATTTTTGCGAGCTACTATTATAGGTTGATCTTCGTCCCTATGATTCTTCTCTGTTGT------------
--------------------------------------------------------------------------------
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>chr5B_745
CATAGA--------------------------------------------------------------------------
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--------AAATTTGTTCTTAGAGATTAATGGGCCAGGCCAACTGCGAACCAGATAGTCGGGC-GTCCAGTAGGCCTGTT
GTAGCCCAACCCAAGCCTGTCCTGCGGCCTTCTCCCTTCGTCGAGCGGCGCAACACAAAACAAAAGGCAAGGCAGGACGC
GAGAGAGAACCCTCTCAAAACCCTAGAACAC-TAGGCACAG-CCGCCGCCGCCGCTGCTCCCAGGACAGCAGCCAAGGAA
GAGGACTCCAAGCCTCCGCCATGCCGAAATCCAAGCGCAATCGCTCAGGTCAGTTCACTCGCTCCGTTCTGCTGCCCTCA
ATCCCCCCCTCCTGCCTCTACCCGCTTCCTTCTCCGTCTCCTGGATTCGACCAAGTTTTGCTGACCAAACTTGTGTGTTT
GGATTAGTTCCAACGACCAGTGGTGTTCATATGGAACCTAAATATGTGCTAAACTGCTAGTCAAGAATTGAAACCCAAGT
TTCGGCGAGCAACCATGTCATTTTTCTGTTCTTATTTTGTCATCTCATGCTCAAAATCTCGATGTTT-GATGATGGGCGC
AGTCACCTTGTCAAAGACCAAGAAGAAGCCGGGGCTAGAGCGTAAGGGCAAGGTGGTCACGGAAATCAAAGACGCCATTG
AGCGCCACAGCAGCGCCTATGTCTTCACCTACAACAATATGAGGAATCAGAAGCTCAAGGACCTCAGGGACCAACTCAAG
TCCTCTAGCCGGTAGGTTCCACTCTTTATTTATTACTAC-----------------------------------------
------------------------------------------TACTAGTTATCTCTTATGCTGTGTTCAAGTCCTCTATC
CAAGAGCAATTCAGAACATGGTTGGTTTTGAATCATTTCCTTCACAACAATGACATGTCTGCAAATGCT-TTTTGGCTTG
AATCAACATAATTTGCTTCAGCTCGTTGATGCATGCTGCTTTGTTTTGCTGGACAGTGCCTTGAAACCCTGATAAAGTGA
TAAGTCACAACTATGGTGCATATAGAACACACACCATGCTAGTTAATGC-TAAGCTTTACTGGCAGTTGATGCTGCAAAA
TTTGTAGACCAATTTTATAACTTGTAAGTATT---TTTTTTCTCAGGATATTCCTTGCTGGAAAGAAGGTCATGCAGATA
GCATTGGGGCGGTCACCTGCTGATGAAGCTAAGACAGGCCTGCATAAACTCTCCAAGGTGATTCATCCTTTGCCAGTGTT
TGGTAGATACTGTTAAGTGTAGTCCACACCATTCTTGTGAGGTTTTTGCTGACAGCTACTTCTCTGTATCTATAGTTCCT
TCAAGGTGCTTCTGGATTGTTATTTACCAATCTCCCAAGGGATGATGTCGAGAGGTAGCCCTATCTTATAGTT-TTTAGC
ATTGCACATTGTTGGTAATGCTTGCTTACATACTTGGCGCGGCTCTAGTAACGTTATGATCATAAATCC----TGCAGAT
TATTCCGAGAATTTGAGGTGAATGATTTTGCGAGGACAGGAAGTATTGCTACTCAAACGGTATTACTTTTGCTTTCATGT
TCATGGACTCATGGTCAAGCTTTTAGTTTGGTTACACAGTGTTAAGCTTTTAGTAATTCTGGACATGTAATTAGTACT--
----------------------------GGTAGGACTCCCTCTGTTCTGATATAGAGAGTACTTATTTTGCAAATCCTGA
CAGGCCTAAAGGGTGCAATCGTTCCAATCTTACCCCTAATTAAATGTTGGTCTTCCTAAAGCAGACACATGTTATGCTGG
CCTTTCTTGCTGCAGATTGTGGGGAGATGGGAAATGTAGAAGTAACTGCATGATAATTCTGGGGATTAAGTTATTGCGCC
AGTTTTCCTGACGCCGCATCGGTGCACGCAAAAACTTTGTGACAGCTGGTGTGGGTATTTTTGGTAGAATTGGCGTGAGA
TTGATGGGATGCCTTATATTAGTAATTGCATGAAAAAAATTACATGCCCTATAACA----------CGGAACAGAGGGAG
------------------------------------------------------------------------------TA
TGCCCTGGATAGGGTATAACAATGAGTGGTAGTCGAAAGTTGTGTTATTCTTCTATTAAATAGCGCTTGTGGTTTCTTGT
ATGAGTTGGCTAGCA-AAACTCTG-AACTTTATGATGCCTCAGGTTGAGCTAAAGGAAGGTCCTCTGGAACAGTTTTCAC
ATGAAATGGAGCCCTTTCTGCGCAAGCAAGGACTGCCAGTTCGCCTAAACAAAGGTTTGTACTTCCCTTGCACGCAGGTG
CTTGAAGCTACCAAGCAAAATGGTTGGAATTAATAAAGTTAACCGTTGTTGGTGCAGGTGTTGTTGAATTGGTTGCAGAT
CATGTAGTATGTGAAGAAGGAAAGCCCCTTTCACCAGAAGCAGCGCACACTCTGGTATGTAT-GGGATATTGTGCAGTGT
TGCTGACATATATTAGTTAAAAAAAATTAACAAGACAGATACCGATCATGTGCTGTTGTATGGTCAGCCGC----GGGAA
GCAGCAGTATAGTTTCCCAGTAATAGCACGTTAATTAGCTAGGTTTGGCAGATGGTTCACTTTATACACATAGGCAGATG
GTTCACTTTGTACAAAGTTGTA----------------------------------------------------------
--------------------------------------------------------------------------------
--------TACTTTGTTAGGGTGTTCCAGACTTCTGATACCACATATTTATCCTTCATAGAACTTAAGAACTATGTCTGT
GCTTGTTGTGCATGCTGTCGATCTGTTTCTTTTCACTGAGACCCAATTGATTTCCTTGTCGCAGCGCGTGCTTGGGACGA
AGATGGCGACGTTCCGACTGTACCTTGTCTGCCGCTGGTCCTCGGACGACTTTGAAGTGTACAAGGAAGGCTTGGCGCAC
CTGGGAGGTGAGGAAGCTGACGAGTCTTCTTAAGGTTGTTGGAT---CATGGTGGCGTGCTTGTTGTCTAGCTGTGTTCA
GACGGTTTTGTGCCATGCCTTTGTACCCTTAATCCGACAGGAATCTCAAATATATGATCTGACCCAGTTGGGCATATTGT
TGAGTGCCAGTATTTTTGCGAGCTACTATTATAGGTTGATCTTCTTCCTTGGCC-TCTTCTCCGTTGTACT---------
--------------------------------------------------------------------------------
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------------------
>SNPs
SS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSS----------------------------S--S--SS-S----------S--S-------------S-----------
--SS--S--SS-------------------------------------------------------------------S-
SS--S----S--S------S--S----S-S--------S---SSSS----S--S------SS-----S------------
-----S--SS---------S-S-S-----S----------SS----S---S---SSS-SS---SSSSSSSSSS-SS-SSS
-S-SSS-SSS-SSS---SSSSSSS---SS------S----------SSS--------S-----S--------S-------
-SS-S---S-----SS-S-----SS--------SS-S-SSSSSSS-----S-S-------------S--SS-S-------
----SS----SS---S--S------S-S--S-SS------S---SS--S--SSS-------S-------S-------S--
----------S--SSS----SSS----S---------SSS-SSS-S-SSSSSSS-S--SSSS-SSS-SS-SSS-SSSSS-
-----S----S-----------S-------------------------------S--------S----------------
S-----------S----S---------S------------------------S-------------------------S-
---------------------------------------S-S--------------------------------------
--S---S---------------------------------------------------------S----S----------
-------------------------------S--------------------------------------------S---
---------------S---S-----S------------------------S---------S-------------------
----------S----------------S------------------------S----S-S-------S------------
-------S----------------------------------S-------------------------------------
-------------------------------------S--------S---------------------------------
--------------------S----------S------------------------------------------------
--------------------------------------------------------------------------------
------------S----------------S--------------------------------------------------
----------------------------S---------------------------------------------------
--S------------------------------------------S---S-------------SS---S-----------
-------S-------------------------SS---------------------------------------------
---------------------------------------------------------------------------S----
S-------------------------------------------------------S-S--S---S--------------
--------------------------------------------------------------S-----------------
---------------------------------------S----------------------------------------
--------------------------------------------------------------------------------
----------------------------S-----S------S--------------------------------------
--------------------------------------------------------------------------------
------------------------S-------------------------------------------------------
-----------------------------------S--------------------------------------------
-----------------------S--------------------------------------------------S-----
--------------------------------------------------------------------------------
-----------------------------------------S----------S------------S--------------
------------------------------------------------------S------------S------------
------------SS-S--------S-------------------------------------------------------
-------------------------------------------------------------S------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------S--------------------
----------------S-------------------------------------------------SSS--SSSS-----
------------------------SS---S-S------------------------------------S-S--------S
--------SS--S--SS-SS--SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSS---------S-SS---------S-----------------S------S---S----SS------------S-
-------------S-------------------------------S----------------------------------
--------------------------------------------------------------------------------
--------------------------------------------SSS---------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSSSSSS
>forward_855
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------AGGCTAAGTGCGAATGGGAC-------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_2442
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------ATAAGCTGGTAGGACTCCCTCT-----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1047
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------------AGCAGCCAAGGAA
GACGAAA-------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_3182
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------------GTTCCCTTGCACTCAGGTG
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_1226
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------GTTCCAACAGCCAATGGTGC------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>reverse_3340
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------CATGGGATATTGTGCAGTGTT
ACC-----------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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------------------
>forward_2223
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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-------------------------------------------GATGTCGAGAGGTAGCCCTG-----------------
--------------------------------------------------------------------------------
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>reverse_3965
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------TATCATGGTGGCGTGCTTGT----------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
>forward_3596
--------------------------------------------------------------------------------
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--------------------------------------------------------ATGTGCCTATGGGAAGCAGC----
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------
>reverse_4692
--------------------------------------------------------------------------------
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---------------------------------------------------TAGGCCACCGATCCAGAGAA---------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------------
