>input_sequence_27865
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---------------------------------------------------------------------------ATGGA
CGATGGGCCCGGCCTCGCCGGCGAGCCCGCCCCTGCGTCCTCGTCGGTATCCTCTTCCGGCTCGCGGGCCTCCCGGCCGC
GCAAGGGGGTGCGGCTCCGCCCGCTGCGCCGGCGGCGCGGTCCGGCGCCCGCCGCACTGGCTTCTCGGGGCGGCGACGGC
GAAGGCGAAGATAATGGCGGCGCCGCCGCGCAGGACGACCTCGCGCTGCCCCTGGGGATGTCGTTCGCGGCAGTTCTCGC
GCGGGTACGTGCTCTGCCGGCCGGTGGTACACAATAAAGTCTCGAATTTTTTTGCTTGGTATTACATACATGGTTGCGCT
AGTCCAGCATTTGTACTCCCTCCGATCC----GATTTAATTGACGCTGACAATT-----------------AATTCGGAT
GGGAGGGAGTAGCATTTTCTTTAAAAC----TATATGCTGCCTTTACACACAGCTGATAAGTTCCTAGTATATCTTTCAA
AAAAAAATTTAAGTTCCTAGTATTACCATCTTTTGGTTTTGAGGTTTGCACATTTGTAATTGTACTGCACCAATGCATAT
GCTGTAAAACCTCCTAGTCAACATAGAAACCGGAAGAAATGTTTGCGCCCTTAAGGTGTAGTTTCATGGAATGAAAGTTT
AGTGTGCCTATTGGAAGGAGAACCTCCTTCTGCAAACTGCAGCAAAAAAATAAAGGAAAATTGACTGTTTACTTGTACTA
GCATGGGGTAATAGAATTATAAGTAGATGAAATAACATGGGGTTTAATGTTTGCGAACCGTGGCTGCTTGTCCGATTGAG
GACAGCTTGTCGATTTAG-GCAACGTCTGCTATTGGTTCCAAGATTCGACGTTGTTACTAATTTCCATATCTGTGGTGAA
CGCTAAATGATCTAAAATTGAACTGTTGAATGTGCT-GCCTTTCTTTCCTCCACTTCATCTTTCCAATGC-CAACTTATG
CATGTCTGCTTACATTCGCCGCCTTTTCATTCGTTTGCAGTTCCCACAACTGCACACTTGTTCTCTTTAGTAAACGA---
--TACATTGTACTCACCCGTGTACTACTACACATTTGCGTTTCATGATCATTTTGTTAAATGGTCTACCTTATTGGTCAG
GGTAATAAGGAGTTACCTTCCCTGATGACAGGTTATGAATTCGAGCAATGATTCAGGCGAAAGATTGCATCCGGTCATCC
TTTCCAAGGTACATGATTTATAATTTAGCAATAAGCCCTGTAAACCATTAAAAATGTTGTC-------------------
--------TCAAATCGCAGATCTGTACATCAGCGGTGAAGGAATCTTTGGCAAATGTAAGCATGGCCCTCTTTTTGTTGG
AGCTCACCTTTCTGTTGACATTCCTTGTATATCTTTTACTTATCAGTTGTATAGACATATGGTGACAGGTTTGACAGTTT
CATGAGAAATTTTGAGAATTCATTTAGCAGCACACTGAGGACGCTTCATCGTATTAATGAGATACCTGTCTATGAGAGTA
GTCCTACTCCTGAATACTCTTCTACACATGGAGGCTCTGGGGCTGTAGGAAACTCGAGCGCTGTTGATCTGCAAAATCAT
ACAAAAGAAATCGAGCAGGACCTCATGAACTCTGTAGAAAGTCAACTTGTTCTTTATGCCAGAGACAATCGACAGCTGGC
TGATCGTGCTCATAGCAGATCCTCTCGTGAAGCTGATCAGTGCATTCTCAGTGCTTTTGAGAGATCTGTGAAGGAGCAGG
CTCGCTCAAACGAACTCAAGGAGCGTGAGATTAGTCTTAGCATGAGAAAGCTGCAGCTGAAACAGACTGAATTAGCTCTT
AGCTCCTCCTCGCACATGTTAGAGAAGATTAAGTTGTCCTTGGGTTTTCAGAAAGCTTCCTTCCAAGGAGAGAAATTCAA
GACTCAGATGCAGGACACAAGGCATGCAGAAATTCTGAGGACTCTTATAGATTTCCTTGTTAGTGCAGTGGTAATTATGT
CAGTGTGTTTTGCTTATGGAACTTATGTTCACTCGTACCAACGGATAACTGATGTTACAGCAGCTTGTTCAGCTGCTTCA
AGGGTACGTTCATCTACCTTATCGCTCAAAATTACTCTTGATAAGTCTCTTTGTTAATCAGAAGCTTCTCACTGTCTCTT
TTCCCACCTCATACAGGGATCTAAATCTTGGTGGGTGCCAAATTCAGTGTCAAACTTCAATTCTGGCTTGCAGTTCGTCA
GATGTCATGTGATAGCAGCAACACGTATGTGCTTTGGCATAGTCATGATTGTGGCAATTGCTTGGTTAGCATCCCAGCGT
TCCGCACTGACTGGATCAAATATGCCTATAACTTTCAATTTCATTTTGTTGGGAGTTATTTGCGGCTTTGCTGGAAGGTT
TTGTGCCAACACTCTAGGCGGTGATGGAAATATCTGGCTTGTATGGTGGGAAGTCCTTTGTTCCATCCATTTACTTGGAA
ACTGTTATCCATCTGTTATTTACCACGTTCTTCATGGTCCTATATCAGTAACTCACAGCAAGGATGGTATGTGGCTCCCG
TACTGGTTTCGCCGGTGCATATTTTATGCTGTGCTGGGGCTTGTTATCCCAGCCTTGACTGGCTTACTTCCATTTGCTTC
TCTCTCTGACTGGACGGACCATTTTACGGAAGAGATAAAATCCTTCTTTGTTGGTAACGAAGTTGAAGCCTGAAGTATCT
TGTGTTCAAATAAACCTTTTGGACTTCTGGAGGAGTAACATATGTTGAATTTGATGTTTGCCTCAGAAGTTTATCTTTGG
AGAAGGAAACTTTGGATGGGAGTTGATGGCATTGTTGAACCATAA-----------------------------------
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>chr3A_1_TraesCS3A01G424900
TAGAATAGAATATGTACCCCCAAACCGCCACATTCAATCGATACAATTCCACTTCGGAATAGAAACTTCAAAGGACAAGC
AGAGTCATCGCTTTCAGGTCGTTCTCACATCGAGGGAACG-CACATCCACTAATTGATGGCGCGTGGGCGGCGCAAAGTC
TTCGGCCCCATGGCATCACAAACGGCTGGTCACTGTTGCATGGGGGTGGCACCGGGTCACCGTGGCGTGAAGTAGCGCAA
CAAACCCCAATTTATCGCCGCTTGGCGGAAGATCGGCCTCGTTGAATTGCAGCCAAGTTCGTCAACACTGTTTGCCTCGA
AGATCATGATGTTGCGTCGAGATCTGGGTACGGGTTCTCCAGATATTTATCTAATGAGA-----------GATTATCTGC
TAATTAGCATTTAAGTAGTTAGGTAGAAATTATGCTTGCCCTTGAGCCCCCCTCCCAACTGAGGTAGGTCGAAGCCGCTC
CTTAGG-TCATGCCTGTAGCACCGCTCGTCAAGACCTCCCACCCCTTCTACACACT--TCTTGCTTCTTTTTGCTGAGTG
CCATGCATCAGTTTGGGGAACAACACTCCACTCTTCTCGCTGCCGGCGTGCGGTATAGATGAATTCAATTTGGTGAAATT
CATAGAAGGGGTAACTTGGTTTTTTCATGTCAGCTAAATTCTGGAGATGATATAAATTTTAGAAAAGGGGCAAAAGGCAA
ATGGTCAAACGGCAAATAAAATTAGGGTAAAATATCATGTATACCATGCAAAAGAAGGGCTAAAAAATATACAAAAATGA
TCAAAAGGCTTGGAAAAGATAGGGCAAAATCCCATTCTCTGAACGAAAATCCAACGGCTAATTCAGCCCAA-CCGCCGCG
CACACATCCG---------TAGTTCTGTTTACTCCCACGCCGCTTCGTTTTCGTTCTTGTCGGCCGTTCCCCATCCATCT
CCATCCAGATCGCGGAA----------CCCCATTTGACTACCACCGGCTTCGCGGGACCCCCTCTCCCCTCCGGGATGGA
CGATGGGCCCGGCCTCGCCGGCGAGCCCGCCCCTGCGTCCTCGTCGGTATCCTCTTCCGGCTCGCGGGCCTCCCGGCCGC
GCAAGGGGGTGCGGCTCCGCCCGCTGCGCCGGCGGCGCGGTCCGGCGCCCGCCGCACTGGCTTCTCGGGGCGGCGACGGC
GAAGGCGAAGATAATGGCGGCGCCGCCGCGCAGGACGACCTCGCGCTGCCCCTGGGGATGTCGTTCGCGGCAGTTCTCGC
GCGGGTACGTGCTCTGCCGGCCGGTGGTACACAATAAAGTCTCGAATTTTTTTGCTTGGTATTACATACATGGTTGCGCT
AGTCCAGCATTTGTACTCCCTCCGATCC----GATTTAATTGACGCTGACAATT-----------------AATTCGGAT
GGGAGGGAGTAGCATTTTCTTTAAAAC----TATATGCTGCCTTTACACACAGCTGATAAGTTCCTAGTATATCTTTCAA
AAAAAAATTTAAGTTCCTAGTATTACCATCTTTTGGTTTTGAGGTTTGCACATTTGTAATTGTACTGCACCAATGCATAT
GCTGTAAAACCTCCTAGTCAACATAGAAACCGGAAGAAATGTTTGCGCCCTTAAGGTGTAGTTTCATGGAATGAAAGTTT
AGTGTGCCTATTGGAAGGAGAACCTCCTTCTGCAAACTGCAGCAAAAAAATAAAGGAAAATTGACTGTTTACTTGTACTA
GCATGGGGTAATAGAATTATAAGTAGATGAAATAACATGGGGTTTAATGTTTGCGAACCGTGGCTGCTTGTCCGATTGAG
GACAGCTTGTCGATTTAG-GCAACGTCTGCTATTGGTTCCAAGATTCGACGTTGTTACTAATTTCCATATCTGTGGTGAA
CGCTAAATGATCTAAAATTGAACTGTTGAATGTGCT-GCCTTTCTTTCCTCCACTTCATCTTTCCAATGC-CAACTTATG
CATGTCTGCTTACATTCGCCGCCTTTTCATTCGTTTGCAGTTCCCACAACTGCACACTTGTTCTCTTTAGTAAACGA---
--TACATTGTACTCACCCGTGTACTACTACACATTTGCGTTTCATGATCATTTTGTTAAATGGTCTACCTTATTGGTCAG
GGTAATAAGGAGTTACCTTCCCTGATGACAGGTTATGAATTCGAGCAATGATTCAGGCGAAAGATTGCATCCGGTCATCC
TTTCCAAGGTACATGATTTATAATTTAGCAATAAGCCCTGTAAACCATTAAAAATGTTGTC-------------------
--------TCAAATCGCAGATCTGTACATCAGCGGTGAAGGAATCTTTGGCAAATGTAAGCATGGCCCTCTTTTTGTTGG
AGCTCACCTTTCTGTTGACATTCCTTGTATATCTTTTACTTATCAGTTGTATAGACATATGGTGACAGGTTTGACAGTTT
CATGAGAAATTTTGAGAATTCATTTAGCAGCACACTGAGGACGCTTCATCGTATTAATGAGATACCTGTCTATGAGAGTA
GTCCTACTCCTGAATACTCTTCTACACATGGAGGCTCTGGGGCTGTAGGAAACTCGAGCGCTGTTGATCTGCAAAATCAT
ACAAAAGAAATCGAGCAGGACCTCATGAACTCTGTAGAAAGTCAACTTGTTCTTTATGCCAGAGACAATCGACAGCTGGC
TGATCGTGCTCATAGCAGATCCTCTCGTGAAGCTGATCAGTGCATTCTCAGTGCTTTTGAGAGATCTGTGAAGGAGCAGG
CTCGCTCAAACGAACTCAAGGAGCGTGAGATTAGTCTTAGCATGAGAAAGCTGCAGCTGAAACAGACTGAATTAGCTCTT
AGCTCCTCCTCGCACATGTTAGAGAAGATTAAGTTGTCCTTGGGTTTTCAGAAAGCTTCCTTCCAAGGAGAGAAATTCAA
GACTCAGATGCAGGACACAAGGCATGCAGAAATTCTGAGGACTCTTATAGATTTCCTTGTTAGTGCAGTGGTAATTATGT
CAGTGTGTTTTGCTTATGGAACTTATGTTCACTCGTACCAACGGATAACTGATGTTACAGCAGCTTGTTCAGCTGCTTCA
AGGGTACGTTCATCTACCTTATCGCTCAAAATTACTCTTGATAAGTCTCTTTGTTAATCAGAAGCTTCTCACTGTCTCTT
TTCCCACCTCATACAGGGATCTAAATCTTGGTGGGTGCCAAATTCAGTGTCAAACTTCAATTCTGGCTTGCAGTTCGTCA
GATGTCATGTGATAGCAGCAACACGTATGTGCTTTGGCATAGTCATGATTGTGGCAATTGCTTGGTTAGCATCCCAGCGT
TCCGCACTGACTGGATCAAATATGCCTATAACTTTCAATTTCATTTTGTTGGGAGTTATTTGCGGCTTTGCTGGAAGGTT
TTGTGCCAACACTCTAGGCGGTGATGGAAATATCTGGCTTGTATGGTGGGAAGTCCTTTGTTCCATCCATTTACTTGGAA
ACTGTTATCCATCTGTTATTTACCACGTTCTTCATGGTCCTATATCAGTAACTCACAGCAAGGATGGTATGTGGCTCCCG
TACTGGTTTCGCCGGTGCATATTTTATGCTGTGCTGGGGCTTGTTATCCCAGCCTTGACTGGCTTACTTCCATTTGCTTC
TCTCTCTGACTGGACGGACCATTTTACGGAAGAGATAAAATCCTTCTTTGTTGGTAACGAAGTTGAAGCCTGAAGTATCT
TGTGTTCAAATAAACCTTTTGGACTTCTGGAGGAGTAACATATGTTGAATTTGATGTTTGCCTCAGAAGTTTATCTTTGG
AGAAGGAAACTTTGGATGGGAGTTGATGGCATTGTTGAACCATAAAGGAAGAATAGTTGAA--------GGTATCAATGC
TTGCAGTCAGGCGGTGCAAGCTTCTTCGTTGTAGTGAACTTGTGACCTTGCACTCAGATGTCAGGTATCAATGCTTCAGT
TTGCTGTATATATTTTTGTTCTCAAGGTGCAAGGTCACAGTATAGTGTTAAGAGTGCAGATCGGTTAACTGCCACCTGTG
TTGTAGTTATGTTTGTTTAATCTTTCTCCTGGAATGATGCTTTTCTTGCCTCACTTGG---GTAAATTTAGAGACAATAC
AGTGTTAAAGAGTGCAGACCAGTTGACTACCACCTTTATTGAAGTTATGCTCTTCTAATCTTTCTCCTGGAATGGCGTTT
TTCTTACCTCAGTTGTGCAATCTTTTTGCTCA---CTGTCAATATCAAGAGATGTAGTTCCTCTACTGTTGACCGCTTAC
GGCTAAAATGTTTATGCTGCCATTGTTTTAGCTGTATGCCTGTGTGTATGATCCTCAACTATTTTAGATGCAAAGCTCAA
AAGTATGCACAATTATGTGTTCTGCTGAACATACTAGGCATTTATTTTCTCTCATTTGCATATAGTT----TTTTTTCTT
CTCCCACTCATGTACACAATTGTTAACCCCAAATAT--------------------------------------------
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--------------------------------------------------------------------------------
-------------------------------------------------------TATAATTTAATAAGAATT-ATCGGC
TATTAATAACTGCCTAGTGAAATACCCCGTAACATAATATAAGACCTTTTTTGACACTGTCATAG---------------
---------------------------TGTC--AAAACGTCTTGTATTATGTTACGGAGGGAGTACTACTGAATATTTGA
GCTGATCTCATAAAGATGCAGCAGTTGAT---GTAATTGAGAAGTACATTTCTGTTTTGATTATAAAAACTCCTTCCAAA
AAATATTAGGAATATTAATTTCATCTCAAGTCATTTTAAAAAGTTGACCAAGTTTATAGAAAGATATCAATATCTACTAT
ACTAAATAAATACACTGAAAT----TTTTTCATGATGTATGTATTGATACTGATTTGGTATTGTAGCTGTTGATAGTTTT
TTCTATGAACTTGC
>chr3D_43
------------------------------------------ACAATTCCGCTTCGGAATCGAAACTTCAAAGGACAAGC
AGAGTCGTCGCTTTTGGGTCGTTGTCGCATCGAGGGAACACCACATCCACTAATTGATGGCGCGTGGGCGGCGCAAAGTC
TTCGGCCCCGTGGCATCACAAACGGCTGGTCGCTTTTGCATGGGGGTGGCACCGGGTCATCGTGGCATGAAGTAGCACAA
CAAACCCCAATTTA--------TGGCGGAAGATCGGTCTCGTTGAATTGCAGCCAAGTTCGTTAACACTGTTTGCCTCGA
AGATCATGGTGTTGCGTCGAGATCTGGGTACGGGTTCTCTAAATATTTATCTAATTATTAAGATGGAGGGGATTATCTGC
TAATTAGTATTTAAGTAGTTAGGTAGAA-TTATGCTTGCCCTTGAGCCCCCCTCCCAACTGAGGTAGGTCGGAGCCGCTC
CTTGAGCTCATGCTTGGAGCACCGCTCGTCAAGACCTCCCACCCCCTCTACGGACTTCTCTTGCTTCCTTTCGTTGAGTG
CCATGCATCAGTTTGGGGAGCAACACTCCACTCTTCTCGCTGCCGGCACGTGGTATAGATGAATACACTTTGGTGAAATT
TATAGGAGGGGTAACTTGGTCTTTTCATGTCAGCTAAATTCTGGAGATGATATAAATTTTTAGAAAAGGGCAAAAGGCAA
ATGGTCAAACGGCAAGTAAAATTAGGGCAAAATATCATGCATACAATGTAAAAGAAGGGCTAAAAAATAC---AAAATGA
TCAAAAGGCTTGGAAAAGATAGGGCAAAATCCCAATTTCTGAACGAAAATCCAACGGCTAATTCAGCCCAAACCGCCACG
CATATACAGTATAGCCGTTTAGTTTTGTTTACTCCCACGCCGCTTCGTTTTCGTTCATGTCGGCCGTTCCCCATCCATCT
CCATCCAGATCGCGGAACCTGGACGAGCCCCATTTGACTACTACCGGCTTCGCGGGACCCCCTCTCCCCTCCGGGATGGA
CGACGGGCCCGGCCTCGCCGCCGAGCCCGCCCCCGCGTCCTCGTCGGCATCCTCTTCCGGCTCGCGGGCCTCCCGGCCGC
GCAAGGGGGTCCGGCTCCGCCCGCTGCGGCGGCGGCGCGGTCCGGCGCCCGCCGCACTGGCTTCTCGGGGCGGCGACGGC
GAAGGCGAAGATAATGGCGGCGGCGCCGCGCAAGACGACCTCGCGCTGCCACTGGGGATGTCGTTCGCGGCCGTTCTCGC
GCGGGTACGTGCTCTGCCGGGCCGTGGTACACATTAAAGTTTCGATTTTTGCTTGGTACCAC----TACATGGTTGTGCT
AGTCCAGCATCTGTACTCCCTCCGCTCCGAATGAATTAATTGACGCAGCCTCTGTACAATGTGTCAATTACAATTCGGAT
CGGAGGAAGTAGCATTTTCTTTAAAAC----TATATGCTGCCTTTACACAAACCTGATAAGTTCCTAGTATCAT------
--------------------------CATC-TTTGGTTTTGAGGTTTGCACATTTGTAATTGCACTGTACCAATGCATAT
GCTGTAAAACCCCCTAGTCAACATAGAAACCTGAAGAAATGTTTGCGCCGTTTAGG-GTAGTTTCATGGAACAAAATTTT
AGTGTGCCTATTGGAAGGAGAACCTCCTTCTGCAAACTGCAGCCAAAAAATAAAGGAAAATCGACTGTTTACTTGTACTA
GCATGGGGTAATAGAATT----GTAGGTGAAATAACATGGGGTTTAATGTTTGCAAACCATGGCTGCTTGTCCGATTGAG
CACAGCTTGTCGATTTAGTGCAACGTCTGCTACTGGTTCGAAGATTCGACGTTGTTACTAATTTCCATATCTGTGGTGAA
CGCTAAATGCTCTAAAATTGAACTGTTGAACGTGCT-GCCTTTCTTTCCTCCACTTCTGCTTTCCAATGC-CAACTTATG
CATGTCTGGTTATATTCACCGCGTTTTCATTCGTTTGCAGTTCCCACAACTGCATGCTTGTTCTCTTTAGTAAACAATAC
TGTACATTGTACTCACCTGCATACCACTACACATTTGTGTTTCATGATCATTTTGTTAAATGGTGTACCTTATTAGTCAG
AGTAATAAGGAGTTACCTTCCCTGATGACAGGTTATGAATTCGAGCAATGATTCAGGAGAAAGATTGCATCCGGTCATCC
TTTCCAAGGTACATGATTTATAATTTAGCGATAAGCCCTGTTAACCATTAAAAAATGT----------TGTCTCAAATCG
AGCCGGATTTGAAATGCAGATCTGTACCTCAGCGGTGAAGGAATCTTTGGCAAATGTAAGCATGGCTCTCTTTTTGTTGG
AGCTCACTTTTCTGTTGACATTCCTTGTATATCTTTTACTTATCAGTTGTATAGACATATGGTGACAGGTTTGACAGTTT
CATGAGAAATTTTGAGAATTCATTTAGCAGCACATTGAGGACGCTTCATCGTATTAATGAGATACCTGTCTATGAGAGAA
GTCCTACTCCTGAATACTCTTCTATACATGGAAGCTCTGGGGCTGTAGGAAACTCAAGTGCTGTTGATCTGCAAAATCAT
ACAAAAGAAATCGAGCAGGACCTCGTGAACTCTGTAGAAAGTCAACTTGTTCTTTATGCCAGAGACAATCGACAGCTGGC
TGATCGTGCTCATAGCAGATCCTCTCGTGAAGCTGATCAGTGCATTCTCAGTGCTTTTGAGAGATCTGTGAAGGAGCAGG
CTCGCTCAAACGAACTCAAGGAGTGTGAGATTAGTCTTAGCATGAGAAAGCTGCAGCTGAAACAGACTGAATTAGCTCTT
AGCTCCTCCTCGCACATGTTAGAGAAGATTAAGTTGTCCTTGGGTTTTCAGAAAGCTTCCTTCCAAGGAGAGAAATTCAA
GACTCAGATGCAGGACACAAGGCATGCAGAAATCCTGAGGATTCTTATAGATTTCCTTGTTAGTGCAGTGGTAATTATGT
CAGTGTGTTTTGCTTATGGAACTTATGTTCACTCGTACCAACGGATAACTGATGTTACAGCAGCTTGTTCAGCTGCTTCA
AGGGTACGTTCATGTACCTTATCGCTCAAAATTACTCTTGATAAGTCTCTTTGTTAATCAGAAGCTTCTCACTGTCTCTT
TTCCGACCTCATACAGGGATCTAAATCTTGGTGGGTGCCAAATTCAGTGTCAAACTTCAATTCTGGCTTGCAGTTCGTCA
GATGTCATGTGATAGCAGCAACACGTATGTGCTTTGGCATAGTAATGATTGTGGCAATTGCTTGGTTAGCATCCCAGCGT
TCCGCACTGTCTGGATCAAATATGCCTATAACTTTCAATTTCATTTTATTGGGAGTTATTTGCGGCTTTGCTGGAAGGTT
TTGTGCCAACACTCTAGGCGGTGATGGAAATATCTGGCTTGTATGGTGGGAAGTCCTTTGTTCCATCCATTTACTCGGAA
ACTGTTATCCATCTGTTATTTACCGTGTTCTTCATGGTTCCATATCAATAACTCACAGCAAGAATGGTGTGGGGCTGCCG
TACTGGGTTCGCCGGTGCATATTTTATGCTGCGCTGGGGCTTGTTATCCCGGTCTTGACTGGCTTACTTCCATTTGCTTC
TTTCTCTGACTGGAGGGACCATTTTTCTGAAGAGATAAAATCCTTCTTTGTTGGTGACGAAGTTGAAGTCTGAAGTATCT
TGTATGGAAATAAACCTTTTGGACTTCTGGAGGAGTAAGATATGTTGAATTGGATGGTTGCCTCAGAAGTTTATCTTTGG
AGAAGGAAACTTTGGATGGGAGTTGATGGCATTGTTGAACCATAAAGGAAGAATAGTTGAA--------GGTATCAATGC
TTGCAGCCAGGCGGTGCAAGCTTCTTCTTTGTAGTGAACTTGTGACCTTGCACTTGGATGCCAGGTATTAATGCTTCAGT
TTGCCGTATATATTTTTGTTTTCAAGGTGCAAGGTCACAGTATAGTGTTAAGAGTGCAGACTAGTTAACTGCCACCTGTG
TTGTAGTTATGTTTGTTTAATCTTTCTCCTGGAATGATGCTTTTCTTGCCTCACTTATTGTGTGAATTTAGAGATAATAC
AGTGTT-AAGAGTGCAGACCAGTTGACTACCACCTT----------ATGCTCTTCTAATCTTTCTCCTGGAATGATGTTT
TTCTTGCCTCAGTTGTGCAATCTTTTTGCTCA---CTGTCAATATCAAGAGATGTAGTTCCTCTAGTGTTGACCGCTTAG
GCCTAAAATGTTTATGCTGCCATTGTTTTAGCTGTATGCCTGTATGTATGATCGTCAACTATTTTACATGCAAAGCTCAA
AAGTATGCACAATTATGAGTTCTGCTGAACATAATAGTGCATTTA-TTTTCTCATTTGCATATAGTTCGTCTTTTTT-TT
CTCCCACTCATGTACAGAATTGTGAACCCCAAATATTACTCCCTCCGTTCCAAAACATAGTGCATATAGATTTTTTGAAA
AGTCAAAGTTTGCAAACTTTGACCAAATTTATAGAGAAAACTATCTATATCTAGAATACCTAATATATAAAATATGAACT
ACATCTTATGATGAGTATAATGATATATATGTTTGGCATTCTAGATGTAAATGTTTTTCTTCAAAAACTTGGTCAAAGTT
GGTGAGGTTTGACTCTTAAAAAATCTATATGCACTACATTATGGGACGGAGGGAGTATAATTTAATAAGAATTTATCGGC
TATTAATAACTGTCTAGTGAAATACTCCGTAACATAATATAAGACGTTTTTTGACACTGTCAAAAAATGTCTTATATTAT
GTTACGGAGGGAGACGTTTTTTTACACTGTCAAAAAATGTCTTATATTATGTTACGGAGGGAGTACTACTGAATATTTCA
GCTCATCTCATAAAGATGCAGCAGTTGAT---GTAATTGAGAAGTACATTTCTGTTTTGATTAAAAT--CTCCTTCC-CA
AAATATTAGGAATATTAATTTTATCTCAAGCCATTTTAAAAAGTCGACCAAGTTTATAGAAAGATATCAATATCTACTAT
ACTAAATAAATACACTATGTAAACATATTTCATGATGTATGCATTGATACTGATTTGGTATTGTAGCTGTTGATAGCTTT
TTCTATGAACTTGC
>chr3B_830
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--------------------------------------------GAAAATCCAACGGCTAATTCAGCCCAA-CCGCCACG
CATATATAT-----CCGTTTTGTTTTGTTTACTCCCACGCCGCTTCGTTTTCGTTCTTGTCGGCCGTTCCCCATCCATCT
CCATCCAGATCGCGGAA----------CCCCATTTGACTACTACCGGCTTCCCGGGACCCCCTCTCCCCTCCGGGATGGA
CGACGGGCCCGGCCTCGCCGGCGAGCCCGCCCCCGCGTCCTCGTCGGCATCCTCTTCCGGCTCGCGGGCCTCCCGGCCGC
GCAAGGGGGTGCGGCTCCGCCCGCTGCGGCGGCGGCGCGGTCCGGCGCCCGCCGCACTGGCTTCTCGGGGCGGCGACGGC
GAACGCGAAGATAATGGCGGCGGCGCCGCGCAGGAAGACCTCGCGCTGCCACTGGGGATGTCATTCGCGGCCGTTCTCGC
GCGGGTACGTGCTCTGCCGGGCCGTGGTACACATTAAAGTTTCGATTTTTGCTTGGTAT-AC----TACATGGTTGCGCG
AGTCCAGCATTTGTAGCA--------------------------------------------------------------
---------------TTTCTTTAAAACTACTTATATGGTGCCTTTACACACACCTGATAAGTTCCTAGTATCAT------
--------------------------CATCTTTTGGTTTTGAGGTTTGCACATTTGTAATTGTACTGCACCAGTGCATAT
GCTGTAAAACCTCCTAGTCAACATAGAAACCTGAAGAAATGTTTGCACCGTTAAGG-ATAGTTTCATGGAACAAAAGTTT
AATGTGCCTATTGGAAGGAGAACTTCCTTCTGCAAACTGCAGCAAAAAAATAAAGGGAAATGGACTGTTTACTTGTA---
-------------GAATT----AAAGATGAAATAGCATGGGGTATAATGTTGGCGAACCGTGGCTGCTTGTCCGGTTGAG
GACAGCTTGTCAATTTAGTGCAACATCTGCTATTGGTTCCAAGATTCGA-GTTGTTATTAATTTCCATATCTGTGGTGAA
CGCTAAATGCTCTAAAATTGAACTGTTGAATTTGCTAGCCTTTCTGTCCTCCACCTCGCTTATCAATCATTCAACTTATG
CATGTC-------ATTCATCGTGTTTTCA------------TCCCACAACTGCACACTTGTTCTCTTTAGTAAACGA---
--TACATTGTACTCACCTGCGTACCACTACACATTTGCGTTTCATGATCATTTTGTTAAATGGTCTACCTTATTGGTCAG
AGTAATAAGGAGGTACCTTCCTTGATTACAGGTTATAAATTCAACCAATGATTCAGGAGAAAGATTGCATCCTGTCATCC
TTTCCAAGGTACATGATTTCTAATTTAGCGATAAGTTCTGTAAACCATTAAAAAAAAGGGTGTCTCAATGACTCAAATCG
AGCTGGATTCAAAATGCAGATCTGTACCTCAGCAGTGAAGGAATCTTTGGCAAATGTAAGCATGGTTCTCTTTTTCTTGG
AGCTCACTTTTCTGCTGACATTCCTTGTATATCTTTTACTTATCAGTTGTATAGACATATGGTGACAGGTTTGACAGTTT
CATGAGAAATTTTGAGAATTCATTTAGCAGCACATTGAGGACGCTTCATCGTATTAATGAGATACCTGTCTATGAGAGAA
GTCCTACTCCTGAATACTCTTCTACGCATGGAGGCTCTGGGGCTGTAGAAAACTCGAGCGCTGCTGATCTGCAAAATCAT
ACAAAAGAAATCGAGCAGGACCTCATGAACTCTGTAGAAAGTCAAGTTGTTCTTTATGCCAGAGACAATCGACAGCTGGC
TGATCGTCCTCATAGCAGATCCTCTCGTGAGGCTGATCGGTGCATTCTCAGTGCTTTTGAGAGATCTGTGAAGGAGCAGG
CTCGCTCGAACGAGCTCAAGGAATGTGAGATTAGTCTTAGCATGAGAAAGCTGCAGCTGAAACAGTCTGAATTAGCTCTT
AGCTCCTCCTCGCACATGTTAGAGAAGATTAAGTTGTCGTTGGGTTTTCAGAAAGCTTCCTTCCAAGGGGAGAAATTCAA
GACTCAGATGCAGGACTCAAGGCACGCAGAAATCCTGAGGACTCTTATAGATTTCCTTGTTAGTGCAGTGGTAATTATGT
CAGTGTGTTTTGCTTATGGAACTTATGTTCACTCGTACCAACGGATAACTGATGTTACAGCAGCTTGTTCAGCTGCTTCA
AGGGTACGTTCATGTACCTTATCGCTCAAAATTACTCTTGATAAGTTTCATTGTTAATCAGAAGCTTCTCACTTTCTCTT
TTCCCACCTCATACAGGGATCTAAATCTTGGTGGGTGCCAAATTCAGTGTCAAACTTCAATTCTGGCTTGCAGTTCGTCA
GATGTCATGTGATAGCAGCAACACGTATGTGCTTTGGCATAGTAATGATTGTGGCAATTGCTTGGTTAGCATCCCAGCGT
TCTGCACTGACTGGATCAAATATGCCTATAACTTTCAATTTCATTTTGTTGGGAGTAATTTGCGGCTTTGCTGGAAGGTT
TTGTGCCAACACTCTAGGCGGTGATGGAAATATCTGGCTTGTATGGTGGGAAGTCCTTTGTTCCAGCCATTTACTCGGAA
ACTGTTATCCATCTGTTATGTACCATGTTCTTCATGGTCCCATATCAATAACTCACAGCAAGAATGGTGTGGGGTTGCCG
TACTGGGTTCGCCGGTGCATATTTTATGCTGCGCTGGGGCTTGTTATCCCGGTCTTGACTGGCTTACTTCCATTTGCTTC
TCTCTCTGACTGGAGGGACCATTTTTCTGAAGAGATAAAATCCTTCTTTGTTGGTGACGAAG------------------
-------AAATAAACCTTTTGGACTTCTGGAGGAGTAAGATATGTTGAATTTGATGTTTGCCTCAGAATTTTATCTTTGG
AGAAGGAGACTTTGGATGGG-GTTGATGGCATTGTTGAACCATACAGGAAGAATAGTTGAAGCCTTGAAGGTATCAATGC
TTGCAGTCAGGCGGTGCAAGCTTCTTCGTTGTAGTGAACTTGTGACCTTGCACTCAGATGTCAGGTATCAATGCTTCAGT
TTGCCGTATATATTTTTCTTTTCAAGGTGCAAGGTCACAGTATAGTGTTAAGAGTGCAGACCGGTTAACTGCCACCTGTG
TCGTAGTTATGTTTGTTTAATCTTTCTCCTGGAATGATGCTTTTCTTGCCTCACT-------------------------
--TGTT-AAGAGTGCAGACCAGTTGACTACCACCTTTATTGTAGTTATGCTCTTCTAATCTTTCTCCTGGAATGGCGCTT
TTCTTGCCTCAGTTGTGCAATCTTTTTGCTCATCACTGTCAATATCAAGAGATGTAGTTCCTCTACTGTTGACCGCTTAC
GGCTAAAATGTTTATGCTGCCATTGTTTTAGCTGTATGCTTGTATGTATGATCCTCAACTATTTTAGATGCAAAGCTCAA
AAGTATGCACAATTATGTGTTCTGCTGAACATACTAGGCATTTATTTTCTCTCATTTGCATATAGTTTGTCTTTTTTTTT
CTCCCACTCATGTACACAATTGTTAACCCCAGATAT--------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------------------TATAATTTAATAAGAATT-ATCGGC
TATTAATAACTG--TAGTGAAATACTCCGTAACATAATATAAGACCTTTTTTGACACAGTCATAG---------------
---------------------------TGTAAAAAAACGTCTTGTATTATGTTATGGAGGGAGTACTGCTGAATCTTTGA
GTTGATCTCATAAAGATGCAGCAGTTGATGTAGTACTTGAGAAATACATTTCTGTTTTGATTATAAAAACTCCTTCC-AA
AAATATTAGGAATATTAATTTTATCTCAACTCATTTTAAAAAGTCGACCAAGTTTATAGAAAGATATCAATATCTACTAT
GCTAAATAAATACACTATGTAAAGATTTTTCATGATGTATGTATTGATAC-----TGGTATTGTAGCTGTTGATAGCTTT
TTCTATGAAATTGC
>SNPs
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS--------S---------S-------------------
------S-------SS-------S--S------------S----------------------------------------
---------S---------------------S--S------------------------S------S---------S---
--------------SSSSSSSS--------------S-------------------------S-----------------
--------S------------------------------S-S-------------S-SS---------------------
-------S--------------------S------------------------------------------S--------
---SS--------S--S----------------------------S-----SS--------------S---S-S------
-------------------S---------------------------SS-S-------------S--S------------
S----S--------------S---------------------------------------SSS---S-------------
---------------S-----------S-----------S----S---S--------------------SSSS-------
----------------------------------S-S----------------------------------------S--
--S-S--SSS--------------S-------------------------------------------------------
-----------------------------------------S--------------------------------------
---S-----------------------------S-------------S--------------------------------
----------------------------S---------------------------------------------------
----------------------S---------------------------S--------------------S--------
--------------------S-S----------S------S----S----SS-SSS-SSS-SSSSS--------------
------------------------S---------S-----------S-S-SS-S--------------------------
S-----S---------------------------------------------S------------------SSSSSSSSS
SSSSSSSSSSSSSSSSSSSSSSSSSS------------------------------------------------------
-------------------------------S-----------------S------S--------------SS-------
-------------------------------------------------------------S------------------
------------------SSSS----------------------------------------------------------
--------------------------------------------------------------------------------
---------S-----------------------------------------------SS---------------------
--------S---S----S----S---------------------------------------------------------
-----------------S-S----S-------------------------------------------------------
S--------------------------------------------------------S----------------------
-----------------------------S------------------------SSS--SS-------------------
-------------SS------------S--------------------------------------S-------------
-------S------------------------------------------------------------------------
----------------------------------S-------------------------------------------S-
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------S--------------------------------------------------------
--------------------------------------------------------------------------------
---------------------------------S----------------------------------------------
--------------------------------------------------------------------------------
-------------S------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------------------S------------------------------------
--------------------------------------------------------------------------------
---------------------------------------------------------------------------S----
-------------------------S--------------S------S--------------S-----S--S----S---
------S------------------------S------------------S-S---------------------------
--------------S----------S-S---------------------------S------------S-----------
---S-SS-------------------------------S-----------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
----S---------------S---------------------------------------S-------------------
--------------------------------------------------------SS-----S----------S-----
------S----------------------------------S--------------------------------------
-----S--------------------------------------------------------------------------
-------------------------------------------S------------------------------------
-----------------------------------------------------------------------------S--
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
------------S------------S------------------------------------------------------
--------------------------------------------------------------------------------
-----------------------------------------------------------------------------S--
---------------------S----------------------S-----------------------------------
----------------SSSSS-------------------------------------------------------S---
--------------
>forward_29
---------ATATGTACCCCCAAACCGCC---------------------------------------------------
--------------------------------------------------------------------------------
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>reverse_1632
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
-------------------------------GGAAGAAATGTTTGCGCCCT-----------------------------
--------------------------------------------------------------------------------
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>forward_532
--------------------------------------------------------------------------------
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--------------------------------GACCTCCCACCCCTTCTACA----------------------------
--------------------------------------------------------------------------------
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>reverse_2018
--------------------------------------------------------------------------------
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-----------------GCCGCCTTTTCATTCGTTTG-------------------------------------------
--------------------------------------------------------------------------------
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--------------
>forward_1395
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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---------------TGTACTCCCTCCGATCCGAT---------------------------------------------
--------------------------------------------------------------------------------
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>reverse_2387
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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------------------------------------------------------------------CCTCTTTTTGTTGG
AGCTCACC------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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>forward_1650
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
------------------------------CGGAAGAAATGTTTGCGCCC------------------------------
--------------------------------------------------------------------------------
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>reverse_3583
--------------------------------------------------------------------------------
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--------------------------------------------------------------GATGGTATGTGGCTCCCG
TA------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
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--------------
>forward_3561
--------------------------------------------------------------------------------
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---------------------ACCACGTTCTTCATGGTCCT---------------------------------------
--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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--------------------------------------------------------------------------------
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>reverse_4478
--------------------------------------------------------------------------------
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-----------------------------------------------------------------------------CTT
CTCCCACTCATGTACACA--------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------------------------------------------------------------------------
--------------
